Miyakogusa Predicted Gene
- Lj5g3v1201220.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1201220.1 Non Chatacterized Hit- tr|D0NFZ7|D0NFZ7_PHYIT
Putative uncharacterized protein OS=Phytophthora
infes,27.46,1e-17,seg,NULL; Ank_2,Ankyrin repeat-containing domain;
zf-C3HC4_3,NULL; no description,Ankyrin repeat-con,CUFF.54968.1
(454 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G23280.2 | Symbols: XBAT35 | XB3 ortholog 5 in Arabidopsis th... 515 e-146
AT3G23280.1 | Symbols: XBAT35 | XB3 ortholog 5 in Arabidopsis th... 501 e-142
AT4G14365.1 | Symbols: XBAT34 | XB3 ortholog 4 in Arabidopsis th... 320 1e-87
AT4G35450.5 | Symbols: AKR2 | ankyrin repeat-containing protein ... 70 4e-12
AT4G35450.1 | Symbols: AKR2, AFT, AKR2A | ankyrin repeat-contain... 70 4e-12
AT4G35450.2 | Symbols: AKR2, AFT, AKR2A | ankyrin repeat-contain... 70 4e-12
AT4G35450.3 | Symbols: AKR2, AFT, AKR2A | ankyrin repeat-contain... 70 4e-12
AT4G35450.4 | Symbols: AKR2, AFT, AKR2A | ankyrin repeat-contain... 69 6e-12
AT2G17390.1 | Symbols: AKR2B | ankyrin repeat-containing 2B | ch... 68 2e-11
AT2G38195.2 | Symbols: | RING/U-box superfamily protein | chr2:... 57 2e-08
AT2G38195.1 | Symbols: | RING/U-box superfamily protein | chr2:... 57 3e-08
AT2G38220.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 7e-08
AT2G38185.4 | Symbols: | RING/U-box superfamily protein | chr2:... 55 1e-07
AT2G38185.2 | Symbols: | RING/U-box superfamily protein | chr2:... 55 1e-07
AT2G38185.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 1e-07
AT5G19080.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 2e-07
AT3G53410.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 2e-07
AT2G38185.3 | Symbols: | RING/U-box superfamily protein | chr2:... 54 2e-07
AT1G59560.1 | Symbols: ZCF61, DAL2 | E3 Ubiquitin ligase family ... 54 3e-07
AT1G63900.1 | Symbols: DAL1 | E3 Ubiquitin ligase family protein... 50 3e-06
AT5G04460.3 | Symbols: | RING/U-box superfamily protein | chr5:... 50 3e-06
AT5G04460.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 3e-06
AT3G06140.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 3e-06
AT1G63900.2 | Symbols: DAL1 | E3 Ubiquitin ligase family protein... 50 4e-06
>AT3G23280.2 | Symbols: XBAT35 | XB3 ortholog 5 in Arabidopsis
thaliana | chr3:8321588-8324109 FORWARD LENGTH=438
Length = 438
Score = 515 bits (1327), Expect = e-146, Method: Compositional matrix adjust.
Identities = 272/459 (59%), Positives = 317/459 (69%), Gaps = 26/459 (5%)
Query: 1 MGQGQSKSELLYQQVSYGNSEGIKTLHREGAGLEWMDREGKTPLIVACMNPELCNVAKTL 60
MGQ QSK ELLYQQVSYGNSEGI+ LHR+G LEWMDREGKTPLI+ACMN EL +VAKTL
Sbjct: 1 MGQQQSKGELLYQQVSYGNSEGIRALHRDGGDLEWMDREGKTPLILACMNSELFDVAKTL 60
Query: 61 IELGANVNAYRPGRHAGTPLHHAAKRGLESIVKLLLASGANPLVLNDDCQTALEVARAKG 120
IELG+NVNAYRPGRHAGTPLHHAAKRGLE+ VKLLL+ GANPLVLNDDCQT LEVAR KG
Sbjct: 61 IELGSNVNAYRPGRHAGTPLHHAAKRGLENTVKLLLSHGANPLVLNDDCQTPLEVARVKG 120
Query: 121 HSNVVRAIESHLCLFSGWLREFHGPGFLEVVAPQLVSRKVWVAVLPVGSRNLTRPYKLEL 180
SNVVRAIE H+CLFSGW+REF+GP FL++ APQL+SR+VWV ++P GSRN T+P+KLEL
Sbjct: 121 FSNVVRAIEKHICLFSGWMREFYGPTFLDLFAPQLLSRRVWVVIVPTGSRNPTKPFKLEL 180
Query: 181 AVYSSLQEAQPRTIIPLWKANLEEPKLHQSDPSVTIADFTSRKRFKFGPASENDRQQLTW 240
VY+SLQ+AQPRT++PLWKANLEEPK QSD SV I D +++ R KF P++E D QQL W
Sbjct: 181 VVYASLQDAQPRTVMPLWKANLEEPKAKQSDTSVMIVDNSTKTRLKFAPSTEGDSQQLKW 240
Query: 241 FSNACKGIPQAN--PAFLLSNXXXXXXXXXXXXEDPELAMAINASIQHALQERPTVPDAH 298
F +ACKGIPQ P FL ED LAM +NAS+ H P+ + H
Sbjct: 241 FCDACKGIPQPMHPPVFL----QAPPSAPPPPSED-GLAMGMNASL-HTTMSDPSNLNHH 294
Query: 299 PNIEASSSVSGVDTSKHGFLGTPNPGTNFSESVHEANTGVSVSAGLPSGLDFNPSAPPIN 358
+ASSS ++ G N S G+ L+ +PSAPP+
Sbjct: 295 SIGQASSSSGPSSSTAPPSGKASAFGFN--------------SHGIGIVLESSPSAPPLT 340
Query: 359 DEIPV---DGPIHYXXXXXXXXXXXXXXXAVEKLPEEGQSAGEIGSTCVICLDAPAEGAC 415
D+ DGPIHY E + G G TC ICLDAP+E C
Sbjct: 341 DDDIATVDDGPIHYPSIDSTPVDLPSAASLPASTEGERKEDGNTG-TCAICLDAPSEAVC 399
Query: 416 IPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKLYRV 454
+PCGHVAGCMSCL E+K+K WGCPVCRAKIDQVIKLYRV
Sbjct: 400 VPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQVIKLYRV 438
>AT3G23280.1 | Symbols: XBAT35 | XB3 ortholog 5 in Arabidopsis
thaliana | chr3:8321588-8324109 FORWARD LENGTH=462
Length = 462
Score = 501 bits (1291), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/483 (56%), Positives = 317/483 (65%), Gaps = 50/483 (10%)
Query: 1 MGQGQSKSELLYQQVSYGNSEGIKTLHREGAGLEWMDREGKTPLIVACMNPELCNVAKTL 60
MGQ QSK ELLYQQVSYGNSEGI+ LHR+G LEWMDREGKTPLI+ACMN EL +VAKTL
Sbjct: 1 MGQQQSKGELLYQQVSYGNSEGIRALHRDGGDLEWMDREGKTPLILACMNSELFDVAKTL 60
Query: 61 IELGANVNAYRPGRHAGTPLHHAAKRGLESIVKLLLASGANPLVLNDDCQTALEVARAKG 120
IELG+NVNAYRPGRHAGTPLHHAAKRGLE+ VKLLL+ GANPLVLNDDCQT LEVAR KG
Sbjct: 61 IELGSNVNAYRPGRHAGTPLHHAAKRGLENTVKLLLSHGANPLVLNDDCQTPLEVARVKG 120
Query: 121 HSNVVRAIESHLCLFSGWLREFHGPGFLEVVAPQLVSRKVWVAVLPVGSRNLTRPYKLEL 180
SNVVRAIE H+CLFSGW+REF+GP FL++ APQL+SR+VWV ++P GSRN T+P+KLEL
Sbjct: 121 FSNVVRAIEKHICLFSGWMREFYGPTFLDLFAPQLLSRRVWVVIVPTGSRNPTKPFKLEL 180
Query: 181 AVYSSLQEAQPRTIIPLWKANLEEPKLHQSDPSVTIADFTS------------------- 221
VY+SLQ+AQPRT++PLWKANLEEPK QSD SV I D ++
Sbjct: 181 VVYASLQDAQPRTVMPLWKANLEEPKAKQSDTSVMIVDNSTIPSRRMKKRRVCASHGRRR 240
Query: 222 -----RKRFKFGPASENDRQQLTWFSNACKGIPQAN--PAFLLSNXXXXXXXXXXXXEDP 274
+ R KF P++E D QQL WF +ACKGIPQ P FL ED
Sbjct: 241 PQVVRQTRLKFAPSTEGDSQQLKWFCDACKGIPQPMHPPVFL----QAPPSAPPPPSED- 295
Query: 275 ELAMAINASIQHALQERPTVPDAHPNIEASSSVSGVDTSKHGFLGTPNPGTNFSESVHEA 334
LAM +NAS+ H P+ + H +ASSS ++ G N
Sbjct: 296 GLAMGMNASL-HTTMSDPSNLNHHSIGQASSSSGPSSSTAPPSGKASAFGFN-------- 346
Query: 335 NTGVSVSAGLPSGLDFNPSAPPINDE---IPVDGPIHYXXXXXXXXXXXXXXXAVEKLPE 391
S G+ L+ +PSAPP+ D+ DGPIHY
Sbjct: 347 ------SHGIGIVLESSPSAPPLTDDDIATVDDGPIHYPSIDSTPVDLPSAASLPASTEG 400
Query: 392 EGQSAGEIGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKL 451
E + G G TC ICLDAP+E C+PCGHVAGCMSCL E+K+K WGCPVCRAKIDQVIKL
Sbjct: 401 ERKEDGNTG-TCAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQVIKL 459
Query: 452 YRV 454
YRV
Sbjct: 460 YRV 462
>AT4G14365.1 | Symbols: XBAT34 | XB3 ortholog 4 in Arabidopsis
thaliana | chr4:8271660-8273685 REVERSE LENGTH=376
Length = 376
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 161/273 (58%), Positives = 196/273 (71%), Gaps = 25/273 (9%)
Query: 3 QGQSKSELLYQQVSYGNSEGIKTLHREGAGLEWMDREGKTPLIVACMNPELCNVAKTLIE 62
Q QSK E+L+Q+VS N EGIK+LH EGAGLE +D+ G+TPLI+AC N +L +VAKTL+E
Sbjct: 5 QSQSKDEMLFQEVSNNNVEGIKSLHHEGAGLEGVDKLGRTPLILACTNDDLYDVAKTLLE 64
Query: 63 LGANVNAYRPGRHAGTPLHHAAKRGLESIVKLLLASGANPLVLNDDCQTALEVARAKGHS 122
LG+NVNAYR G + GTPLHHAAKRGL VKLLL+ GANPLVL+DD +TALEVAR +G+S
Sbjct: 65 LGSNVNAYRSGCNGGTPLHHAAKRGLVHTVKLLLSHGANPLVLDDDVKTALEVARDEGYS 124
Query: 123 NVVRAIESHLCLFSGWLREFHGPGFLEVVAPQLVSRKVWVAVLPVGSRNLTRPYKLELAV 182
NVVRAIESH+CLFSG +RE+ G L + APQL+SRKVWV V+P GSRN T+P KLEL +
Sbjct: 125 NVVRAIESHICLFSGCMREYSGSSLLNLFAPQLLSRKVWVVVVPTGSRNPTKPLKLELVL 184
Query: 183 YSSLQEAQPRTIIPLWKANLEEPKLHQSDPSVTIAD---------------FTSRK---- 223
Y S+Q+AQPR +IPLWKANLEEPK + D SV I D F S+
Sbjct: 185 YDSIQDAQPRMVIPLWKANLEEPKSFRCDDSVMIIDDSRSPKSMRQRRESGFISQARRWA 244
Query: 224 ------RFKFGPASENDRQQLTWFSNACKGIPQ 250
R K + D +Q+ WFS ACKG+PQ
Sbjct: 245 QVDRQIRLKLAAEIKGDMKQMNWFSEACKGVPQ 277
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 49/61 (80%)
Query: 394 QSAGEIGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKLYR 453
++A + CVIC+DAP+E C+PCGHVAGC+SCL E++ KK GCPVCRA IDQVIKLY
Sbjct: 316 KTANKEDGLCVICVDAPSEAVCVPCGHVAGCISCLKEIENKKMGCPVCRANIDQVIKLYH 375
Query: 454 V 454
V
Sbjct: 376 V 376
>AT4G35450.5 | Symbols: AKR2 | ankyrin repeat-containing protein 2 |
chr4:16839862-16841759 FORWARD LENGTH=350
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 10 LLYQQVSYGNSEGIKTLHREGAGLEWMDREGKTPLIVACMNPELCNVAKTLIELGANVNA 69
+++Q S G+ EG+K G + D EG+T L AC EL A+ LI+ GA+VNA
Sbjct: 229 IVHQTASLGDVEGLKAALASGGNKDEEDSEGRTALHFACGYGEL-KCAQVLIDAGASVNA 287
Query: 70 YRPGRHAGTPLHHAAKRGLESIVKLLLASGANPLVLNDDCQTALEVARAKGHSNVVRAIE 129
++ TPLH+AA G + V LLL +GA + N D +T ++VA+ VV+ +E
Sbjct: 288 V--DKNKNTPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLE 345
Query: 130 SHLCL 134
L
Sbjct: 346 KDAFL 350
>AT4G35450.1 | Symbols: AKR2, AFT, AKR2A | ankyrin repeat-containing
protein 2 | chr4:16839862-16841759 FORWARD LENGTH=342
Length = 342
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 10 LLYQQVSYGNSEGIKTLHREGAGLEWMDREGKTPLIVACMNPELCNVAKTLIELGANVNA 69
+++Q S G+ EG+K G + D EG+T L AC EL A+ LI+ GA+VNA
Sbjct: 221 IVHQTASLGDVEGLKAALASGGNKDEEDSEGRTALHFACGYGEL-KCAQVLIDAGASVNA 279
Query: 70 YRPGRHAGTPLHHAAKRGLESIVKLLLASGANPLVLNDDCQTALEVARAKGHSNVVRAIE 129
++ TPLH+AA G + V LLL +GA + N D +T ++VA+ VV+ +E
Sbjct: 280 V--DKNKNTPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLE 337
Query: 130 SHLCL 134
L
Sbjct: 338 KDAFL 342
>AT4G35450.2 | Symbols: AKR2, AFT, AKR2A | ankyrin repeat-containing
protein 2 | chr4:16839862-16841759 FORWARD LENGTH=342
Length = 342
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 10 LLYQQVSYGNSEGIKTLHREGAGLEWMDREGKTPLIVACMNPELCNVAKTLIELGANVNA 69
+++Q S G+ EG+K G + D EG+T L AC EL A+ LI+ GA+VNA
Sbjct: 221 IVHQTASLGDVEGLKAALASGGNKDEEDSEGRTALHFACGYGEL-KCAQVLIDAGASVNA 279
Query: 70 YRPGRHAGTPLHHAAKRGLESIVKLLLASGANPLVLNDDCQTALEVARAKGHSNVVRAIE 129
++ TPLH+AA G + V LLL +GA + N D +T ++VA+ VV+ +E
Sbjct: 280 V--DKNKNTPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLE 337
Query: 130 SHLCL 134
L
Sbjct: 338 KDAFL 342
>AT4G35450.3 | Symbols: AKR2, AFT, AKR2A | ankyrin repeat-containing
protein 2 | chr4:16839862-16841759 FORWARD LENGTH=342
Length = 342
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 10 LLYQQVSYGNSEGIKTLHREGAGLEWMDREGKTPLIVACMNPELCNVAKTLIELGANVNA 69
+++Q S G+ EG+K G + D EG+T L AC EL A+ LI+ GA+VNA
Sbjct: 221 IVHQTASLGDVEGLKAALASGGNKDEEDSEGRTALHFACGYGEL-KCAQVLIDAGASVNA 279
Query: 70 YRPGRHAGTPLHHAAKRGLESIVKLLLASGANPLVLNDDCQTALEVARAKGHSNVVRAIE 129
++ TPLH+AA G + V LLL +GA + N D +T ++VA+ VV+ +E
Sbjct: 280 V--DKNKNTPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLE 337
Query: 130 SHLCL 134
L
Sbjct: 338 KDAFL 342
>AT4G35450.4 | Symbols: AKR2, AFT, AKR2A | ankyrin repeat-containing
protein 2 | chr4:16840072-16841759 FORWARD LENGTH=304
Length = 304
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 10 LLYQQVSYGNSEGIKTLHREGAGLEWMDREGKTPLIVACMNPELCNVAKTLIELGANVNA 69
+++Q S G+ EG+K G + D EG+T L AC EL A+ LI+ GA+VNA
Sbjct: 183 IVHQTASLGDVEGLKAALASGGNKDEEDSEGRTALHFACGYGEL-KCAQVLIDAGASVNA 241
Query: 70 YRPGRHAGTPLHHAAKRGLESIVKLLLASGANPLVLNDDCQTALEVARAKGHSNVVRAIE 129
++ TPLH+AA G + V LLL +GA + N D +T ++VA+ VV+ +E
Sbjct: 242 VD--KNKNTPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLE 299
Query: 130 SHLCL 134
L
Sbjct: 300 KDAFL 304
>AT2G17390.1 | Symbols: AKR2B | ankyrin repeat-containing 2B |
chr2:7555870-7557743 FORWARD LENGTH=344
Length = 344
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
Query: 10 LLYQQVSYGNSEGIKTLHREGAGLEWMDREGKTPLIVACMNPELCNVAKTLIELGANVNA 69
+++Q S G+ EG+K G + D EG+T L AC E+ A+ L++ GAN NA
Sbjct: 223 IVHQTASLGDVEGLKAALASGGNKDEEDSEGRTALHFACGYGEV-RCAQVLLDAGANANA 281
Query: 70 YRPGRHAGTPLHHAAKRGLESIVKLLLASGANPLVLNDDCQTALEVARAKGHSNVVRAIE 129
++ TPLH+AA G + V LLL +GA N D + ++VAR +VV+ +E
Sbjct: 282 ID--KNKNTPLHYAAGYGRKECVSLLLENGAAVTQQNMDNKNPIDVARLNNQLDVVKLLE 339
Query: 130 SHLCL 134
L
Sbjct: 340 KDAFL 344
>AT2G38195.2 | Symbols: | RING/U-box superfamily protein |
chr2:16002654-16006261 FORWARD LENGTH=326
Length = 326
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 401 STCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKLY 452
S C IC DAP + +PCGH C C ++K K CP+CR KI V ++Y
Sbjct: 273 SLCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKIMHVKRIY 324
>AT2G38195.1 | Symbols: | RING/U-box superfamily protein |
chr2:16003836-16006261 FORWARD LENGTH=399
Length = 399
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 401 STCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKLY 452
S C IC DAP + +PCGH C C ++K K CP+CR KI V ++Y
Sbjct: 346 SLCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKIMHVKRIY 397
>AT2G38220.1 | Symbols: | RING/U-box superfamily protein |
chr2:16008112-16010538 FORWARD LENGTH=404
Length = 404
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 401 STCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKLY 452
S C IC DAP + +PCGH C C ++K K CP+CR K+ V ++Y
Sbjct: 351 SLCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKMIHVKRIY 402
>AT2G38185.4 | Symbols: | RING/U-box superfamily protein |
chr2:16000155-16002699 FORWARD LENGTH=447
Length = 447
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 387 EKLPEEGQSAGEIGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKID 446
E + +G+++ C IC D P + +PCGH C C ++ CP+CR K+
Sbjct: 380 EFMGNDGEASNRSRRLCAICFDVPRDCFFLPCGHSVSCYECGTTMQEADGSCPICRRKMK 439
Query: 447 QVIKLYRV 454
+V ++Y V
Sbjct: 440 KVKRIYTV 447
>AT2G38185.2 | Symbols: | RING/U-box superfamily protein |
chr2:16000155-16002699 FORWARD LENGTH=441
Length = 441
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 387 EKLPEEGQSAGEIGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKID 446
E + +G+++ C IC D P + +PCGH C C ++ CP+CR K+
Sbjct: 374 EFMGNDGEASNRSRRLCAICFDVPRDCFFLPCGHSVSCYECGTTMQEADGSCPICRRKMK 433
Query: 447 QVIKLYRV 454
+V ++Y V
Sbjct: 434 KVKRIYTV 441
>AT2G38185.1 | Symbols: | RING/U-box superfamily protein |
chr2:16000155-16002699 FORWARD LENGTH=441
Length = 441
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 387 EKLPEEGQSAGEIGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKID 446
E + +G+++ C IC D P + +PCGH C C ++ CP+CR K+
Sbjct: 374 EFMGNDGEASNRSRRLCAICFDVPRDCFFLPCGHSVSCYECGTTMQEADGSCPICRRKMK 433
Query: 447 QVIKLYRV 454
+V ++Y V
Sbjct: 434 KVKRIYTV 441
>AT5G19080.1 | Symbols: | RING/U-box superfamily protein |
chr5:6378400-6380287 FORWARD LENGTH=378
Length = 378
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 400 GSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKL 451
G CVICL P + A +PC H+ C C E++ + CP+CR I +++K+
Sbjct: 318 GKECVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNKCPICRQPIHELVKI 369
>AT3G53410.1 | Symbols: | RING/U-box superfamily protein |
chr3:19801175-19802274 REVERSE LENGTH=299
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 389 LPEEGQSAGEIGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQV 448
+ + G+ A E G CVICL P + +PC H+ C C ++ + CP+CR +D++
Sbjct: 229 VDDNGEDANERGKECVICLSEPRDTTVLPCRHMCMCSGCAKLLRFQTNLCPICRQPVDRL 288
Query: 449 IKL 451
+++
Sbjct: 289 LEI 291
>AT2G38185.3 | Symbols: | RING/U-box superfamily protein |
chr2:16000516-16002699 FORWARD LENGTH=346
Length = 346
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 387 EKLPEEGQSAGEIGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKID 446
E + +G+++ C IC D P + +PCGH C C ++ CP+CR K+
Sbjct: 279 EFMGNDGEASNRSRRLCAICFDVPRDCFFLPCGHSVSCYECGTTMQEADGSCPICRRKMK 338
Query: 447 QVIKLYRV 454
+V ++Y V
Sbjct: 339 KVKRIYTV 346
>AT1G59560.1 | Symbols: ZCF61, DAL2 | E3 Ubiquitin ligase family
protein | chr1:21881741-21883632 FORWARD LENGTH=338
Length = 338
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 397 GEIGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKLYR 453
G+ CV+CLD A + CGH+ C C +++T CP+CR +I QV+K+YR
Sbjct: 285 GDTPDLCVVCLDQKYNTAFVECGHMCCCTPCSLQLRT----CPLCRERIQQVLKIYR 337
>AT1G63900.1 | Symbols: DAL1 | E3 Ubiquitin ligase family protein |
chr1:23717056-23719086 FORWARD LENGTH=343
Length = 343
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 387 EKLPEEGQSAGEIGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKID 446
E + + + + CVICL+ +PCGH+ C +C + + + CP+CR +ID
Sbjct: 280 ESISDSTKKEDAVPDLCVICLEQEYNAVFVPCGHMCCCTACSSHLTS----CPLCRRRID 335
Query: 447 QVIKLYR 453
+K YR
Sbjct: 336 LAVKTYR 342
>AT5G04460.3 | Symbols: | RING/U-box superfamily protein |
chr5:1260009-1263695 FORWARD LENGTH=863
Length = 863
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 402 TCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKLYRV 454
TC +C D + CGH+ C C NE+ CP+CRA I +VI+ Y +
Sbjct: 810 TCCVCCDNHIDALLYRCGHMCTCSKCANELVRNGGKCPLCRAPIIEVIRAYSI 862
>AT5G04460.1 | Symbols: | RING/U-box superfamily protein |
chr5:1260009-1263695 FORWARD LENGTH=863
Length = 863
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 402 TCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKLYRV 454
TC +C D + CGH+ C C NE+ CP+CRA I +VI+ Y +
Sbjct: 810 TCCVCCDNHIDALLYRCGHMCTCSKCANELVRNGGKCPLCRAPIIEVIRAYSI 862
>AT3G06140.1 | Symbols: | RING/U-box superfamily protein |
chr3:1856993-1858777 REVERSE LENGTH=359
Length = 359
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 400 GSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKIDQVIKL 451
G+ CVIC+ + A +PC H+ C C E++ + CP+CR I++++++
Sbjct: 299 GTECVICMTEAKDTAVLPCRHLCMCSDCAKELRLQSNKCPICRQPIEELLEI 350
>AT1G63900.2 | Symbols: DAL1 | E3 Ubiquitin ligase family protein |
chr1:23717056-23719086 FORWARD LENGTH=347
Length = 347
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 387 EKLPEEGQSAGEIGSTCVICLDAPAEGACIPCGHVAGCMSCLNEVKTKKWGCPVCRAKID 446
E + + + + CVICL+ +PCGH+ C +C + + + CP+CR +ID
Sbjct: 284 ESISDSTKKEDAVPDLCVICLEQEYNAVFVPCGHMCCCTACSSHLTS----CPLCRRRID 339
Query: 447 QVIKLYR 453
+K YR
Sbjct: 340 LAVKTYR 346