Miyakogusa Predicted Gene

Lj5g3v1201210.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1201210.1 Non Chatacterized Hit- tr|I3T6A8|I3T6A8_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,68.92,3e-18,seg,NULL; DUF640,Domain of unknown function DUF640;
FAMILY NOT NAMED,NULL,CUFF.54959.1
         (155 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G31160.1 | Symbols: LSH3 | Protein of unknown function (DUF64...    74   6e-14
AT3G23290.2 | Symbols: LSH4 | Protein of unknown function (DUF64...    73   8e-14
AT5G58500.1 | Symbols: LSH5 | Protein of unknown function (DUF64...    65   1e-11
AT1G07090.1 | Symbols: LSH6 | Protein of unknown function (DUF64...    65   2e-11
AT5G28490.1 | Symbols: LSH1 | Protein of unknown function (DUF64...    64   3e-11
AT3G04510.1 | Symbols: LSH2 | Protein of unknown function (DUF64...    64   3e-11
AT2G42610.2 | Symbols: LSH10 | Protein of unknown function (DUF6...    57   5e-09
AT2G42610.1 | Symbols: LSH10 | Protein of unknown function (DUF6...    57   5e-09
AT1G78815.1 | Symbols: LSH7 | Protein of unknown function (DUF64...    54   6e-08
AT4G18610.1 | Symbols: LSH9 | Protein of unknown function (DUF64...    47   6e-06

>AT2G31160.1 | Symbols: LSH3 | Protein of unknown function
          (DUF640) | chr2:13277903-13278562 FORWARD LENGTH=219
          Length = 219

 Score = 73.6 bits (179), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 31/32 (96%), Positives = 32/32 (100%)

Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCSGA 86
          RYENQKRRDWNTFGQYLRNHRPPL+LSRCSGA
Sbjct: 54 RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGA 85


>AT3G23290.2 | Symbols: LSH4 | Protein of unknown function
          (DUF640) | chr3:8326958-8328010 FORWARD LENGTH=195
          Length = 195

 Score = 72.8 bits (177), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 31/32 (96%), Positives = 32/32 (100%)

Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCSGA 86
          RYENQKRRDWNTFGQYLRNHRPPL+LSRCSGA
Sbjct: 48 RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGA 79


>AT5G58500.1 | Symbols: LSH5 | Protein of unknown function
          (DUF640) | chr5:23645535-23646083 REVERSE LENGTH=182
          Length = 182

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 28/32 (87%), Positives = 30/32 (93%)

Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCSGA 86
          RYE+QKRRDWNTF QYLRNH+PPL LSRCSGA
Sbjct: 19 RYESQKRRDWNTFLQYLRNHKPPLNLSRCSGA 50


>AT1G07090.1 | Symbols: LSH6 | Protein of unknown function
          (DUF640) | chr1:2174202-2174792 REVERSE LENGTH=196
          Length = 196

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 27/32 (84%), Positives = 30/32 (93%)

Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCSGA 86
          RYE+QKRRDWNTF QYL+NH+PPL LSRCSGA
Sbjct: 31 RYESQKRRDWNTFLQYLKNHKPPLALSRCSGA 62


>AT5G28490.1 | Symbols: LSH1 | Protein of unknown function
          (DUF640) | chr5:10454541-10455113 REVERSE LENGTH=190
          Length = 190

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 28/32 (87%), Positives = 29/32 (90%)

Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCSGA 86
          RYENQKRRDWNTF QYLRNHRPPL+L  CSGA
Sbjct: 25 RYENQKRRDWNTFCQYLRNHRPPLSLPSCSGA 56


>AT3G04510.1 | Symbols: LSH2 | Protein of unknown function
          (DUF640) | chr3:1215812-1216417 REVERSE LENGTH=201
          Length = 201

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 27/32 (84%), Positives = 29/32 (90%)

Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCSGA 86
          RYENQKRRDWNTF QYLRNH PPL+L+ CSGA
Sbjct: 33 RYENQKRRDWNTFCQYLRNHHPPLSLASCSGA 64


>AT2G42610.2 | Symbols: LSH10 | Protein of unknown function
          (DUF640) | chr2:17748005-17748538 FORWARD LENGTH=177
          Length = 177

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 23/30 (76%), Positives = 27/30 (90%)

Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCS 84
          RYE+QKRRDWNTFGQYL+N RPP+ +S CS
Sbjct: 25 RYESQKRRDWNTFGQYLKNQRPPVPMSHCS 54


>AT2G42610.1 | Symbols: LSH10 | Protein of unknown function
          (DUF640) | chr2:17748005-17748538 FORWARD LENGTH=177
          Length = 177

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 23/30 (76%), Positives = 27/30 (90%)

Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCS 84
          RYE+QKRRDWNTFGQYL+N RPP+ +S CS
Sbjct: 25 RYESQKRRDWNTFGQYLKNQRPPVPMSHCS 54


>AT1G78815.1 | Symbols: LSH7 | Protein of unknown function
          (DUF640) | chr1:29632054-29632641 REVERSE LENGTH=195
          Length = 195

 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 21/30 (70%), Positives = 26/30 (86%)

Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSRCS 84
          RYE+QKRRDWNTF QYLRN +PP+ +S+C 
Sbjct: 40 RYESQKRRDWNTFCQYLRNQQPPVHISQCG 69


>AT4G18610.1 | Symbols: LSH9 | Protein of unknown function
          (DUF640) | chr4:10250794-10251369 FORWARD LENGTH=191
          Length = 191

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 19/28 (67%), Positives = 24/28 (85%)

Query: 55 RYENQKRRDWNTFGQYLRNHRPPLTLSR 82
          RYE+QKRRDWNTF QYL++  PPL +S+
Sbjct: 37 RYESQKRRDWNTFVQYLKSQNPPLMMSQ 64