Miyakogusa Predicted Gene

Lj5g3v1175630.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1175630.2 Non Chatacterized Hit- tr|I1LC86|I1LC86_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.42,0,no
description,Tetratricopeptide-like helical; coiled-coil,NULL;
seg,NULL; Tetratricopeptide repeats,CUFF.54945.2
         (398 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G28600.1 | Symbols: NPGR2 | no pollen germination related 2 |...   340   1e-93
AT2G43040.1 | Symbols: NPG1 | tetratricopeptide repeat (TPR)-con...   268   6e-72
AT1G27460.1 | Symbols: NPGR1 | no pollen germination related 1 |...   207   7e-54
AT3G04240.1 | Symbols: SEC | Tetratricopeptide repeat (TPR)-like...    55   7e-08

>AT4G28600.1 | Symbols: NPGR2 | no pollen germination related 2 |
           chr4:14130046-14132599 FORWARD LENGTH=739
          Length = 739

 Score =  340 bits (872), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 189/400 (47%), Positives = 267/400 (66%), Gaps = 6/400 (1%)

Query: 1   MEGKERYYTLALCYCGEGESMIAXXXXXXXXXXXXXXXCIQELLLASKICADNNVCVADG 60
           ++ +E Y+TL+LCY G GE ++A                   LL+ASKIC + +    +G
Sbjct: 344 LDQRELYHTLSLCYQGAGEGLVALGLLRKLFSEREDPNRTSGLLMASKICGERSGLAEEG 403

Query: 61  IKYSSKAISQMNGKCIQMVAIANCLLGVLLSAKSRSVSSEFEKASMQSEALSALESAERM 120
           + Y+ KAI  +  +C Q+   A  +LG+ L+  SR   +E E+ + QSE + ALESA+  
Sbjct: 404 LDYARKAIGNLGKECSQLDGAARFVLGITLTESSRMAVTETERIARQSEGIQALESADM- 462

Query: 121 MRENDPFIVHHLCVEYAEQRKLELAFYHAKKLIKLEGGSSIIGYLLLARILSAQKKFLDA 180
               +P +VH L +E AEQRKL+ A  +AK+ +KL   S +  +LLLAR+LSAQK+F DA
Sbjct: 463 ---TNPRVVHRLALENAEQRKLDSALAYAKEALKLGAESDLEVWLLLARVLSAQKRFSDA 519

Query: 181 EIVVDAALDQSGRWDQGELLRTKDKLRIAQGKLKNAEETYTFLLAVLQVQNKCLGTANKV 240
           E +VDAAL+++G+W+QG+LLR K KLR+A+G++K+A +TYT LLA+LQVQ+K   +A K+
Sbjct: 520 ETIVDAALNETGKWEQGKLLRLKAKLRLAKGEVKDAIKTYTQLLALLQVQSKSFNSAKKL 579

Query: 241 VKRKGNRDRRLEMEIWHDLANLYSKLSQWHDAEVCLAKSEAINPYSASRWHSTGLLFEAR 300
            K        LE+  WHDLA++Y  LSQW DAE CL++S  I PYS+ R+H  G+L+  R
Sbjct: 580 PKGYVKELMSLELGTWHDLAHIYINLSQWRDAESCLSRSRLIAPYSSVRYHIEGVLYNRR 639

Query: 301 GLHQEALRSFRKALDIEPNHVPSLVSTACALRHFGGQSS-SIVRSLLNDALRLDRTNQSA 359
           G  +EA+ +F  ALDI+P HVPSL S A  L   G +S  ++VRS L +ALR+DR N SA
Sbjct: 640 GQLEEAMEAFTTALDIDPMHVPSLTSKAEILLEVGNRSGIAVVRSFLMEALRIDRLNHSA 699

Query: 360 WYNLGLLYKADLGASAL-EAVECFEAAVLLEESSPIEPFR 398
           WYNLG ++KA+   S++ EAVECF+AAV LEE+ P+EPFR
Sbjct: 700 WYNLGKMFKAEGSVSSMQEAVECFQAAVTLEETMPVEPFR 739


>AT2G43040.1 | Symbols: NPG1 | tetratricopeptide repeat
           (TPR)-containing protein | chr2:17896049-17898524
           REVERSE LENGTH=704
          Length = 704

 Score =  268 bits (684), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 157/396 (39%), Positives = 234/396 (59%), Gaps = 8/396 (2%)

Query: 5   ERYYTLALCYCGEGESMIAXXXXXXXXXXXXXXXCIQELLLASKICADNNVCVADGIKYS 64
           ER+ TLAL Y   G++  A                +  LLLA+K+C++     A+G  Y+
Sbjct: 310 ERWNTLALSYSAAGQNSAAVNLLRKSLHKHEQPDDLVALLLAAKLCSEEPSLAAEGTGYA 369

Query: 65  SKAISQMNGKCIQMVAIANCLLGVLLSAKSRSVSSEFEKASMQSEALSALESAERMMREN 124
            +AI+   G    +  +   +LG+ L  +++  +S+FE++ +QSE+L AL+ A      N
Sbjct: 370 QRAINNAQGMDEHLKGVGLRMLGLCLGKQAKVPTSDFERSRLQSESLKALDGA-IAFEHN 428

Query: 125 DPFIVHHLCVEYAEQRKLELAFYHAKKLIKLEGGSSIIGYLLLARILSAQKKFLDAEIVV 184
           +P ++  L V+YAEQR L+ A  +AK+ I   GGS + G+  LA +LSAQ++F +AE+V 
Sbjct: 429 NPDLIFELGVQYAEQRNLKAASRYAKEFIDATGGSVLKGWRFLALVLSAQQRFSEAEVVT 488

Query: 185 DAALDQSGRWDQGELLRTKDKLRIAQGKLKNAEETYTFLLAVLQVQNKCLGTANKVVKRK 244
           DAALD++ +WDQG LLR K KL+I+Q     A ETY +LLA++Q Q K  G    + + +
Sbjct: 489 DAALDETAKWDQGPLLRLKAKLKISQSNPTEAVETYRYLLALVQAQRKSFGPLRTLSQME 548

Query: 245 GNRDRRLEMEIWHDLANLYSKLSQWHDAEVCLAKSEAINPYSASRWHSTGLLFEARGLHQ 304
              D+  E E+WH LA LYS LS W+D EVCL K+  +  YSAS  H+ G ++E R   +
Sbjct: 549 --EDKVNEFEVWHGLAYLYSSLSHWNDVEVCLKKAGELKQYSASMLHTEGRMWEGRKEFK 606

Query: 305 EALRSFRKALDIEPNHVPSLVSTACALRHFGGQSS---SIVRSLLNDALRLDRTNQSAWY 361
            AL +F   L ++ + VP  V+    L   G        + RSLL+DALR+D TN+ AWY
Sbjct: 607 PALAAFLDGLLLDGSSVPCKVAVGALLSERGKDHQPTLPVARSLLSDALRIDPTNRKAWY 666

Query: 362 NLGLLYKADLGASALEAVECFEAAVLLEESSPIEPF 397
            LG+++K+D      +A +CF+AA +LEES PIE F
Sbjct: 667 YLGMVHKSD--GRIADATDCFQAASMLEESDPIESF 700


>AT1G27460.1 | Symbols: NPGR1 | no pollen germination related 1 |
           chr1:9534977-9537424 FORWARD LENGTH=694
          Length = 694

 Score =  207 bits (528), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 137/396 (34%), Positives = 219/396 (55%), Gaps = 13/396 (3%)

Query: 5   ERYYTLALCYCGEG--ESMIAXXXXXXXXXXXXXXXCIQELLLASKICADNNVCVADGIK 62
           ER+Y L+LCY   G  ++ I                 I  LL  +K+C+ +     DGI 
Sbjct: 308 ERWYLLSLCYSAAGIDKAAINLLKMALGPSESRQIPHIPLLLFGAKLCSKDPKHSRDGIN 367

Query: 63  YSSKAISQMNGKCIQMVAIANCLLGVLLSAKSRSVSSEFEKASMQSEALSAL-ESAERMM 121
           ++ + +   N +   +++ A+  LGV     +RS   + E+  +Q ++L +L E+A+R  
Sbjct: 368 FAHRLLDLGNSQSEHLLSQAHKFLGVCYGNAARSSKLDSERVFLQKKSLFSLNEAAKRGK 427

Query: 122 RENDPFIVHHLCVEYAEQRKLELAFYHAKKLIKLEGGSSIIGYLLLARILSAQKKFLDAE 181
            + +  ++ +L VE A QR ++ A   A +   + GG S  G+  LA +LSA+K+  DAE
Sbjct: 428 ADPELDVIFNLSVENAVQRNVQAALDGAVEYSSMVGGVSTKGWKHLAIVLSAEKRLKDAE 487

Query: 182 IVVDAALDQSGRWDQGELLRTKDKLRIAQGKLKNAEETYTFLLAVLQVQNKCLGTANKVV 241
            ++D  ++++G  ++ ELLR K  L++AQ + K A +T + LL +++ Q K   + + + 
Sbjct: 488 SILDFTMEEAGDIEKIELLRLKAVLQMAQEQPKKAMKTCSSLLGLIRAQEKSEQSESLL- 546

Query: 242 KRKGNRDRRLEMEIWHDLANLYSKLSQWHDAEVCLAKSEAINPYSASRWHSTGLLFEARG 301
                  ++ E E W DLA++Y KL  W DAE CL K+ ++  YS   W+ TGL  EA+ 
Sbjct: 547 -------QKFETEAWQDLASVYGKLGSWSDAETCLEKARSMCYYSPRGWNETGLCLEAKS 599

Query: 302 LHQEALRSFRKALDIEPNHVPSLVSTACALRHFGGQSSSIVRSLLNDALRLDRTNQSAWY 361
           LH+EAL SF  +L IEP+HVPS+VS A  +   G +S    +S L +ALRLD  N  AW 
Sbjct: 600 LHEEALISFFLSLSIEPDHVPSIVSIAEVMMKSGDESLPTAKSFLMNALRLDPRNHDAWM 659

Query: 362 NLGLLYKADLGASALEAVECFEAAVLLEESSPIEPF 397
            LG + K   G S  +A E ++AA  LE S+P++ F
Sbjct: 660 KLGHVAKKQ-GLSQ-QAAEFYQAAYELELSAPVQSF 693


>AT3G04240.1 | Symbols: SEC | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:1114187-1120722 REVERSE
           LENGTH=977
          Length = 977

 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 35/230 (15%)

Query: 187 ALDQSGRWDQGELLRTKDKLRIAQGKLKNAEETYTFLLA----VLQVQNK---CLGTANK 239
           AL+ S    Q   LRT + L I  G +    + Y   +A     L++Q +   C G    
Sbjct: 72  ALEHSNMVYQRNPLRTDNLLLI--GAIYYQLQEYDMCIARNEEALRIQPQFAECYGNMAN 129

Query: 240 VVKRKGNRDRRLEM------------EIWHDLANLYSKLSQWHDAEVCLAKSEAINPYSA 287
             K KG+ DR +              + W +LA+ Y +  +  +A  C  ++ ++NP   
Sbjct: 130 AWKEKGDTDRAIRYYLIAIELRPNFADAWSNLASAYMRKGRLSEATQCCQQALSLNPLLV 189

Query: 288 SRWHSTGLLFEARGLHQEALRSFRKALDIEPNHVPSLVSTACALRHFGG---QSSSIVRS 344
               + G L +A+GL  EA   + +A+ I+P       + A A  +  G   +S  + R+
Sbjct: 190 DAHSNLGNLMKAQGLIHEAYSCYLEAVRIQP-------TFAIAWSNLAGLFMESGDLNRA 242

Query: 345 L--LNDALRLDRTNQSAWYNLGLLYKADLGASALEAVECFEAAVLLEESS 392
           L    +A++L      A+ NLG +YKA LG    EA+ C++ A+ +  +S
Sbjct: 243 LQYYKEAVKLKPAFPDAYLNLGNVYKA-LGRPT-EAIMCYQHALQMRPNS 290