Miyakogusa Predicted Gene

Lj5g3v1145290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1145290.1 Non Chatacterized Hit- tr|I3S6Z0|I3S6Z0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.2,0,Adenine
nucleotide alpha hydrolases-like,NULL; ETF,Electron transfer
flavoprotein, alpha/beta-subuni,CUFF.54852.1
         (251 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G43430.1 | Symbols: ETFBETA | electron transfer flavoprotein ...   415   e-116
AT5G43430.3 | Symbols: ETFBETA | electron transfer flavoprotein ...   359   1e-99
AT5G43430.2 | Symbols: ETFBETA | electron transfer flavoprotein ...   298   3e-81

>AT5G43430.1 | Symbols: ETFBETA | electron transfer flavoprotein
           beta | chr5:17453656-17455111 FORWARD LENGTH=251
          Length = 251

 Score =  415 bits (1067), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 198/251 (78%), Positives = 228/251 (90%)

Query: 1   MKIMVAIKRVVDYAVKIRVKPDKTGVVTQNVKMSMNPFCEIALEEALRIRESGLASEVVA 60
           MKI+VA+KRVVDYAVKIRVKPDKTGV TQNVKMSMNPFCEIALEEALRI+E+G A EV+A
Sbjct: 1   MKILVAVKRVVDYAVKIRVKPDKTGVETQNVKMSMNPFCEIALEEALRIKEAGFAKEVIA 60

Query: 61  VSMGPAQSVDTLRTGLAMGADRGIHVEANGSLYPLSVAKILKKLVEIEKPGLLILGKQAI 120
           VS+GP+Q VDTLRTGLAMGADRGIHVE N    PL++AKILK L ++E PGL+ LGKQAI
Sbjct: 61  VSIGPSQCVDTLRTGLAMGADRGIHVETNSIFLPLTIAKILKSLADVENPGLIFLGKQAI 120

Query: 121 DDDCNQTGQMTAGLLNWPQGTFASKVVLDKEKQVATVDREVDDGIETVSLNLPAVITTDL 180
           DDDCNQTGQM A LL WPQ TFASKVVLDK+K VATVDREVD G+ET++++LPAVITTDL
Sbjct: 121 DDDCNQTGQMVAALLGWPQATFASKVVLDKDKNVATVDREVDGGLETLNVDLPAVITTDL 180

Query: 181 RLNQPRYATLPNIMKAKSKPIKKYTPEELNVEIKSDLEIVQVTEPPKRKAGVVLSSVDEL 240
           RLNQPRYA+LPNIMKAKSKPIKK T ++L V+IKSD+EI++VTEPPKRK+GV++SSVDEL
Sbjct: 181 RLNQPRYASLPNIMKAKSKPIKKMTVQDLKVDIKSDIEILEVTEPPKRKSGVMVSSVDEL 240

Query: 241 IDKLKHEARVI 251
           IDKLK+EA V+
Sbjct: 241 IDKLKNEAHVV 251


>AT5G43430.3 | Symbols: ETFBETA | electron transfer flavoprotein
           beta | chr5:17453831-17455111 FORWARD LENGTH=219
          Length = 219

 Score =  359 bits (921), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 169/219 (77%), Positives = 197/219 (89%)

Query: 33  MSMNPFCEIALEEALRIRESGLASEVVAVSMGPAQSVDTLRTGLAMGADRGIHVEANGSL 92
           MSMNPFCEIALEEALRI+E+G A EV+AVS+GP+Q VDTLRTGLAMGADRGIHVE N   
Sbjct: 1   MSMNPFCEIALEEALRIKEAGFAKEVIAVSIGPSQCVDTLRTGLAMGADRGIHVETNSIF 60

Query: 93  YPLSVAKILKKLVEIEKPGLLILGKQAIDDDCNQTGQMTAGLLNWPQGTFASKVVLDKEK 152
            PL++AKILK L ++E PGL+ LGKQAIDDDCNQTGQM A LL WPQ TFASKVVLDK+K
Sbjct: 61  LPLTIAKILKSLADVENPGLIFLGKQAIDDDCNQTGQMVAALLGWPQATFASKVVLDKDK 120

Query: 153 QVATVDREVDDGIETVSLNLPAVITTDLRLNQPRYATLPNIMKAKSKPIKKYTPEELNVE 212
            VATVDREVD G+ET++++LPAVITTDLRLNQPRYA+LPNIMKAKSKPIKK T ++L V+
Sbjct: 121 NVATVDREVDGGLETLNVDLPAVITTDLRLNQPRYASLPNIMKAKSKPIKKMTVQDLKVD 180

Query: 213 IKSDLEIVQVTEPPKRKAGVVLSSVDELIDKLKHEARVI 251
           IKSD+EI++VTEPPKRK+GV++SSVDELIDKLK+EA V+
Sbjct: 181 IKSDIEILEVTEPPKRKSGVMVSSVDELIDKLKNEAHVV 219


>AT5G43430.2 | Symbols: ETFBETA | electron transfer flavoprotein
           beta | chr5:17453656-17454872 FORWARD LENGTH=178
          Length = 178

 Score =  298 bits (762), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 140/178 (78%), Positives = 159/178 (89%)

Query: 1   MKIMVAIKRVVDYAVKIRVKPDKTGVVTQNVKMSMNPFCEIALEEALRIRESGLASEVVA 60
           MKI+VA+KRVVDYAVKIRVKPDKTGV TQNVKMSMNPFCEIALEEALRI+E+G A EV+A
Sbjct: 1   MKILVAVKRVVDYAVKIRVKPDKTGVETQNVKMSMNPFCEIALEEALRIKEAGFAKEVIA 60

Query: 61  VSMGPAQSVDTLRTGLAMGADRGIHVEANGSLYPLSVAKILKKLVEIEKPGLLILGKQAI 120
           VS+GP+Q VDTLRTGLAMGADRGIHVE N    PL++AKILK L ++E PGL+ LGKQAI
Sbjct: 61  VSIGPSQCVDTLRTGLAMGADRGIHVETNSIFLPLTIAKILKSLADVENPGLIFLGKQAI 120

Query: 121 DDDCNQTGQMTAGLLNWPQGTFASKVVLDKEKQVATVDREVDDGIETVSLNLPAVITT 178
           DDDCNQTGQM A LL WPQ TFASKVVLDK+K VATVDREVD G+ET++++LPAVIT+
Sbjct: 121 DDDCNQTGQMVAALLGWPQATFASKVVLDKDKNVATVDREVDGGLETLNVDLPAVITS 178