Miyakogusa Predicted Gene

Lj5g3v1145260.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1145260.1 Non Chatacterized Hit- tr|A5AS09|A5AS09_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.46,2e-17,SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL;
seg,NULL; Ribonuclease H-like,Ribonuclease H-like do,CUFF.54842.1
         (660 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G42170.1 | Symbols:  | BED zinc finger ;hAT family dimerisati...   254   2e-67
AT1G18560.1 | Symbols:  | BED zinc finger ;hAT family dimerisati...    85   1e-16

>AT3G42170.1 | Symbols:  | BED zinc finger ;hAT family dimerisation
           domain | chr3:14321838-14323928 FORWARD LENGTH=696
          Length = 696

 Score =  254 bits (648), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 176/636 (27%), Positives = 280/636 (44%), Gaps = 61/636 (9%)

Query: 39  IWNHFTRKRKIKGHWEVYCDYCGEEY-------IAGGDNFEENL-------LLHLGD--- 81
           +W HFT +         +C  C + +       +AG  + + ++       L+H  D   
Sbjct: 70  VWEHFTIEAVEPNCRRAFCKGCNQSFAYSNGNKVAGTSHLKRHIFKGTCPALIHTHDNDN 129

Query: 82  -------HTEIFGGAREEIGSGGHF-----FDEEGARKELALMIICHGYPISIVDHEGFR 129
                  +T      R    S  +      F+++  R+E+A MII H YP+ +V H GF 
Sbjct: 130 NPLMSTPYTPKTDTPRRRYRSQNNASPYVAFNQDKCRQEIAKMIIMHDYPLHMVQHPGFV 189

Query: 130 RFSNSLQPLF-KVDRRMVKKEILKLYNEKKSETMELLSNNKSRVAITADMWSCRDKDKHY 188
            F  S+QP F  V    V+ + +  Y  +K   M+ L     R  +T D W+ +     Y
Sbjct: 190 SFVQSIQPHFDAVSFNNVQGDCVATYLAEKQNVMKSLEGIPGRFCLTLDFWTSK-LTLGY 248

Query: 189 MAIKAHFIDDSMTRQSRMLRFVYVPIPHTEDALSDVIVQCLKDWNLDTKLSTLTVDSCGT 248
           + I AH+ID     Q ++L  +    P  ++ALS  +  C+ +W L+ KL  +T +   +
Sbjct: 249 VFITAHYIDSDWKIQKKLLNVLMESYPEADEALSLAVANCVSEWGLEGKLFNVTFNHPAS 308

Query: 249 SDAIFECVMNKVSPRSLILGGKLFRMRWCNHILNLIVKDGLSIISDTVEKVRECVEFWTA 308
           + A+             IL G+L            + KD L    D ++ +R+ V+    
Sbjct: 309 NSAVENIRPQLCIKNPGILDGQLVIGNCVARTFGSLAKDVLEKGKDVIKNIRDSVKHVKT 368

Query: 309 EPDREETFEETCNQLNIPYGKDLVLDCGTRWVSTFLMINAAIRYKEVFHHLTQQQPQNMP 368
               EE F E   QL +P  K L LD  T+W +T++M+ AA   KEVF  L    P    
Sbjct: 369 SESHEERFTELKEQLQVPSEKVLSLDDQTQWNTTYMMLVAASELKEVFSCLDTADPDYK- 427

Query: 369 LLSEDEWNIQQNMSLPSEDEWNMAKEICQKLELFYDLAELFFGTVSPTPNVYFFKVCTVR 428
                          PS ++W   + +C  L+  ++       T +P+   +F +V   +
Sbjct: 428 -------------KPPSAEDWRHVEALCTFLKPLFEAVSTLQSTGNPSAVTFFHEVWKTQ 474

Query: 429 SALKEWLSCSDAIIQQMASSMIAKFDNYWSGINEVMAVGAVLDPWYKMVLLEFFFPRIYG 488
           S L   ++  D  +  +A +M  K D YW   + V+A+  V+DP +KM L+EF F +I+G
Sbjct: 475 SDLSRAIAGEDPFVTGIAKTMQEKVDKYWRDCSLVLAMAVVMDPRFKMKLVEFSFSKIFG 534

Query: 489 ENACHEIEKVKTVCQDLFMEYXXXXXXXXXXXXXXXXXXXXXXXXXEMYKWEDPMFVKYL 548
           E+A   I+ V     +LF EY                                  F  Y+
Sbjct: 535 EDAGKNIKTVDDGIHELFTEYMALPSPQNTTSEGGKADGLSD-------------FDTYI 581

Query: 549 AERTASENTKSELEQYLDAKVWARSLFKDIDILTWWKANKSGYPTLLSIARDLLAIPTST 608
            E T  +N KSEL+QYLD  +  R   ++ D+L WWK NK  YPTL  +ARD+L+IP S 
Sbjct: 582 ME-TTGQNLKSELDQYLDETLLPR--VQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSA 638

Query: 609 VVSELTFGTSGRFLTSHRSDLHRNYVEALMCTQDWL 644
              +  F    R +  +++ L    VEAL+C ++WL
Sbjct: 639 AAFDYVFDMEPREMDEYKTSLRPETVEALICAREWL 674


>AT1G18560.1 | Symbols:  | BED zinc finger ;hAT family dimerisation
           domain | chr1:6385614-6388005 FORWARD LENGTH=690
          Length = 690

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 119/564 (21%), Positives = 221/564 (39%), Gaps = 71/564 (12%)

Query: 119 PISIVDHEGFRRFSNSLQPLFKVDRRMVKKEIL-KLYNEKKSETMELLSNNKSRVAITAD 177
           P S VD          L+P  ++      K IL +++   + +    L + +S+V++T  
Sbjct: 151 PPSTVDETWLGNSFKFLKPSIQLWPAEKYKAILDEVFTSMRGDVKTTLEHIQSKVSVTLS 210

Query: 178 MWSCRDKDKHYMAIKAHFIDDSMTRQSRMLRFVYVPIPHTEDALSDVIVQCLKDWNLDTK 237
            W+  + +  YM++   +ID++ +    +L    +P P     + + +++ LK + ++ +
Sbjct: 211 FWNSYE-NIFYMSVTGQWIDENWSSHRLLLDICRIPYPSGGSEIYNSLLKVLKTYAIEDR 269

Query: 238 LSTLTVDSCGTSDAIFECVMNKVSPRSLILGGKLFRMRW---CNHILNLIVKDGLSIISD 294
           +   T D+  + +AI  C     S +    G K+    +       LN I+ +GL+ I  
Sbjct: 270 ILCCTHDN--SENAIHAC----HSLKEYFDGQKVLPFCYIPCAAQTLNDIIDEGLATIKP 323

Query: 295 TVEKVRECVEFWTAEPDREETFEETCNQLNIPYGK---DLVLDCGTRWVSTFLMINAAIR 351
            + KVRE  +   A  +  + F     QL   Y +    L +D  +RW   + M+N   +
Sbjct: 324 IISKVREFTQELNASTELSDDFI----QLTTAYQEGNWKLPIDASSRWSGNYQMVNILCK 379

Query: 352 YKEVFHHLTQQQP---QNMPLLSEDEWN----IQQNMSLPSEDEWNMAKEICQKLELFYD 404
             +    + ++     +N  +LS  E N    +   + L S  +     ++C   +L   
Sbjct: 380 ASKSLDSVIRKNEDALENRMMLSSVEKNAVTIVHNYLDLDSFHK--TTNDMCTNKDLTVG 437

Query: 405 LAELFFGTVSPTPNVYFFKVCTVRSALKEWLSCSDAIIQQMASSMIAKFDNYWSGINEVM 464
           LA LF   +S          C       +WL       +  A SM  K  +Y + +  V 
Sbjct: 438 LALLFMDNISE-----MITTCQKSCHNPDWL-------RTCAESMAQKARSYNTQVCNVF 485

Query: 465 A-VGAVLDPWYKMVLLEFFFPRIYGENACHEIEK--VKTVCQDLFMEYXXXXXXXXXXXX 521
             + A+LDP  K    E+    I  E+   E     ++      F               
Sbjct: 486 TYITAILDPRIKT---EYIPETINLESYIDEARSHFIRNYSSSHFTSSMTSGYRPQEVDE 542

Query: 522 XXXXXXXXXXXXXEMYKWEDPMFVKYLAER----TASENTKSELEQYLDAKVWARSLFKD 577
                                 F + +A R    + S N   EL QYL   +    +   
Sbjct: 543 GGGNIS----------------FAEEIARRKRRGSMSNNVVDELTQYLSESI----VPMQ 582

Query: 578 IDILTWWKANKSGYPTLLSIARDLLAIPTSTVVSELTFGTSGRFLTSHRSDLHRNYVEAL 637
            D+L WWK N   YP L ++ARD LA+  ++   E  F   G  +   +  +  +  +++
Sbjct: 583 TDVLDWWKVNSGRYPRLSNMARDFLAVQATSAAPEEIFCGKGEEIDKQKYCMPHDSTQSV 642

Query: 638 MCTQDWLGFSGMDFENDI-DIDFE 660
           +C + W+  +GM  +    +ID+E
Sbjct: 643 ICIRSWIE-AGMKLKYKCSEIDYE 665