Miyakogusa Predicted Gene

Lj5g3v1118470.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1118470.1 Non Chatacterized Hit- tr|I1IZK8|I1IZK8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,36,6e-19,seg,NULL,CUFF.54792.1
         (271 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G44040.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    94   7e-20
AT1G04030.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    57   1e-08
AT2G33400.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    53   2e-07

>AT5G44040.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G04030.1); Has 1807 Blast hits to 1807 proteins
           in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
           Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
           - 339 (source: NCBI BLink). | chr5:17719896-17721348
           REVERSE LENGTH=416
          Length = 416

 Score = 94.4 bits (233), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 98/228 (42%), Gaps = 26/228 (11%)

Query: 64  RKKVTFDSNVKTYEPVLQDEVGGLRESEEGGKVEALVKQXXXXXXXXXXXXXXXXXXYPP 123
           RK+VTFD+NVKTYE +  DE   L E     K E +  +                  YP 
Sbjct: 108 RKRVTFDTNVKTYEHIAVDESVELFEE----KKEEVKSRQARCSSEGSDVTSNSSGSYPS 163

Query: 124 NHRYQNCRXXXXXXXXXXXXYGAXXXXXXXXXXXXXXXXXXXXMSCSKATIDVDHV-FAE 182
           NHRYQNCR              +                     +      + D V + E
Sbjct: 164 NHRYQNCRESDDEEEDVTDCDDSDLEDTDDDDCGLLDDDYYNDDNYEDKLHNWDKVVYTE 223

Query: 183 EVESPILAFEGDVKSIGFNSNARDRSVYVHPVLNPVENLSQWKVV--KGKRTPTLRPQKE 240
           E+   ++  E  V+  G  S  RDRS YV+ VLNP+ENLSQWK V  KG+ T   +P+KE
Sbjct: 224 EIADNVMDIER-VEEKGSVS-VRDRSGYVNAVLNPIENLSQWKAVKAKGRTTTQTQPRKE 281

Query: 241 NFV-----------------SSNHDSETGTSKKLNQELSVDASLSNWL 271
           N +                 S N  S   T K+  QE++VDASLS WL
Sbjct: 282 NVIIASFSLESQVDDLSSTFSLNRKSRDETEKQRTQEIAVDASLSTWL 329


>AT1G04030.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT5G44040.1); Has 1835 Blast hits to 1511 proteins
           in 238 species: Archae - 7; Bacteria - 164; Metazoa -
           377; Fungi - 135; Plants - 187; Viruses - 22; Other
           Eukaryotes - 943 (source: NCBI BLink). |
           chr1:1040597-1042313 FORWARD LENGTH=434
          Length = 434

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 94/254 (37%), Gaps = 70/254 (27%)

Query: 63  TRKKVTFDSNVKTYEPVLQDEVGGLRESEEGGKVEALVK-QXXXXXXXXXXXXXXXXXXY 121
           +RK+VTFDS VKTYE V+ +E   L E +           +                  Y
Sbjct: 75  SRKRVTFDSKVKTYEHVVSEESVELSEEKNEEVESEKRSLKSSKTDDQIIEVASNSSGSY 134

Query: 122 PPNHRYQNCRXXXXXXXXXXXXYGAXXXXXXXXXXXXXXXXXXXXMSCSKATIDVDHVFA 181
           P NHRY+NCR                                     CS + +D D  + 
Sbjct: 135 PENHRYKNCRESDDDIEEDE-------------------------FDCSDSDLDEDEEYY 169

Query: 182 EEV-------ESPILAF----------EGDVKSIGFNSNARDRSVYV-HPVLNPVENLSQ 223
            +V        +P              E D K    N   RD + Y    VLNPVENL+Q
Sbjct: 170 SDVGFSEDSLHNPTKEVYTQDIGDKTEEIDSKLRRSNETVRDGNHYDGQGVLNPVENLTQ 229

Query: 224 WKVVKGK-RTPTLRPQKE--NFVSSNHDSETGTS----------------------KKL- 257
           WK  K K RT   + QKE  NF++   +    +S                      KKL 
Sbjct: 230 WKSAKSKGRTKQKQSQKENSNFIADQEEKRDSSSFGTDPQIDDITLSVKPKCRIEPKKLR 289

Query: 258 NQELSVDASLSNWL 271
           NQEL+VDASLS WL
Sbjct: 290 NQELAVDASLSTWL 303


>AT2G33400.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G04030.1); Has 3875 Blast hits to 2949 proteins
           in 323 species: Archae - 6; Bacteria - 281; Metazoa -
           960; Fungi - 593; Plants - 281; Viruses - 98; Other
           Eukaryotes - 1656 (source: NCBI BLink). |
           chr2:14153331-14154401 REVERSE LENGTH=272
          Length = 272

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 4/61 (6%)

Query: 211 VHPVLNPVENLSQWKVVKGKRTPTLRPQKENFVSSNHDSETGTSKKLNQELSVDASLSNW 270
           V P+LNPVENL+QWK VK +     R  KEN V  + D +   +K L +E+ V+ SLSNW
Sbjct: 190 VAPLLNPVENLAQWKAVKARPVKVKRVMKEN-VEEDMDDQ---AKPLLKEIIVNTSLSNW 245

Query: 271 L 271
           L
Sbjct: 246 L 246