Miyakogusa Predicted Gene

Lj5g3v1117290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1117290.1 Non Chatacterized Hit- tr|I3S9J9|I3S9J9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,93.75,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PCS,Phytochelatin synthase;
Phytochelatin,Phytochel,NODE_23310_length_470_cov_38.610638.path2.1
         (161 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G44070.1 | Symbols: CAD1, ARA8, ATPCS1, PCS1 | phytochelatin ...   239   7e-64
AT1G03980.1 | Symbols: ATPCS2, PCS2 | phytochelatin synthase 2 |...   238   2e-63

>AT5G44070.1 | Symbols: CAD1, ARA8, ATPCS1, PCS1 | phytochelatin
           synthase 1 (PCS1) | chr5:17734876-17737672 FORWARD
           LENGTH=485
          Length = 485

 Score =  239 bits (609), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 104/161 (64%), Positives = 132/161 (81%)

Query: 1   MLDCCEPLEKVKVQGITFGKVACLARCNGAKVEAFRSNESTVSDFRNRVISCCSSEDRHA 60
           MLDCCEPLE VK +GI+FGKV CLA C+GAKVEAFR+++ST+ DFR  V+ C SSE+ H 
Sbjct: 87  MLDCCEPLEVVKEKGISFGKVVCLAHCSGAKVEAFRTSQSTIDDFRKFVVKCTSSENCHM 146

Query: 61  IVSYHRSGLKQTGEGHFSPLGGYHAERDMVLILDVTRYKYPPHWVPVTLLWNAMNTIDRA 120
           I +YHR   KQTG GHFSP+GGY+AERDM LILDV R+KYPPHWVP+ LLW AM++ID++
Sbjct: 147 ISTYHRGVFKQTGTGHFSPIGGYNAERDMALILDVARFKYPPHWVPLKLLWEAMDSIDQS 206

Query: 121 TGLQRGYMIISKLNRAPSILYTLSCRHEGWSSVAKFLTENV 161
           TG +RG+M+IS+ +R P +LYTLSC+ E W  +AK+L E+V
Sbjct: 207 TGKRRGFMLISRPHREPGLLYTLSCKDESWIEIAKYLKEDV 247


>AT1G03980.1 | Symbols: ATPCS2, PCS2 | phytochelatin synthase 2 |
           chr1:1019311-1021871 REVERSE LENGTH=452
          Length = 452

 Score =  238 bits (606), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 103/161 (63%), Positives = 134/161 (83%)

Query: 1   MLDCCEPLEKVKVQGITFGKVACLARCNGAKVEAFRSNESTVSDFRNRVISCCSSEDRHA 60
           ML+CCEPLE VK +GI+FGKV CLA  +GAKVEAFR+N+ST+ DFR  V+ C +S++ H 
Sbjct: 86  MLECCEPLEIVKDKGISFGKVVCLAHSSGAKVEAFRTNQSTIDDFRKYVVKCSTSDNCHM 145

Query: 61  IVSYHRSGLKQTGEGHFSPLGGYHAERDMVLILDVTRYKYPPHWVPVTLLWNAMNTIDRA 120
           I +YHR  LKQTG GHFSP+GGY+AERDM LILDV R+KYPPHWVP+ LLW+AM++ID++
Sbjct: 146 ISTYHRQVLKQTGTGHFSPIGGYNAERDMALILDVARFKYPPHWVPLKLLWDAMDSIDQS 205

Query: 121 TGLQRGYMIISKLNRAPSILYTLSCRHEGWSSVAKFLTENV 161
           TG +RG+M+IS+ +R P +LYTLSC+ E W S+AK+L E+V
Sbjct: 206 TGRRRGFMLISRPHREPGLLYTLSCKDESWISIAKYLKEDV 246