Miyakogusa Predicted Gene
- Lj5g3v1097080.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1097080.1 Non Chatacterized Hit- tr|I1LYM1|I1LYM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7632
PE=,81.15,0,DEAD-like helicases superfamily,Helicase, superfamily 1/2,
ATP-binding domain; helicase superfamily ,gene.g61157.t1.1
(1040 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 1270 0.0
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 313 4e-85
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 254 2e-67
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 254 2e-67
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 254 3e-67
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 254 3e-67
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 252 1e-66
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 248 2e-65
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 247 2e-65
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 244 2e-64
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 244 3e-64
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 244 3e-64
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 242 1e-63
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 241 2e-63
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 237 4e-62
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 237 4e-62
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 234 2e-61
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 229 6e-60
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 229 1e-59
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 227 3e-59
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 222 1e-57
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 218 1e-56
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 211 3e-54
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 211 3e-54
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 211 3e-54
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 211 3e-54
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 207 3e-53
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 207 5e-53
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 206 9e-53
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 203 6e-52
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 181 2e-45
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 179 8e-45
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 165 1e-40
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 144 4e-34
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 144 4e-34
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 116 7e-26
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 110 4e-24
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 102 2e-21
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 101 2e-21
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 101 3e-21
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 100 5e-21
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 100 5e-21
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 100 6e-21
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 100 7e-21
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 99 2e-20
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 98 3e-20
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 96 9e-20
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 92 2e-18
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 89 2e-17
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 86 9e-17
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 81 3e-15
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 80 9e-15
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 80 1e-14
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 79 1e-14
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 67 9e-11
AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases... 66 2e-10
AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helic... 61 5e-09
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 1270 bits (3287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 670/1052 (63%), Positives = 764/1052 (72%), Gaps = 86/1052 (8%)
Query: 1 MVRKGILTPFHKLKGFERRFSQPEASASHNAETSASHAAAQQENNGDLVSSSVERAARSF 60
+VRKGILTPFHKL GFERR QP S S N + N D SS ++RA +S
Sbjct: 209 LVRKGILTPFHKLDGFERRLQQPGPSNSRNLPEG-------DDENED--SSIIDRAVQSM 259
Query: 61 SEAAKARPTTKLLESRDLPKLDAPTIPFRRLTKPLKYSKPIDREAEPNKDSKRKRK-RPL 119
S AAKARPTTKLL++ DLPKL+ PT PFRRL K K D EA+ K K+ +K RPL
Sbjct: 260 SLAAKARPTTKLLDAEDLPKLEPPTAPFRRLRKLYKTPNSPDNEAKKRKAGKKSKKTRPL 319
Query: 120 PGRQWTNRVSREDMQLEDSENANGCLDTSD--QENLGAQDDLADHESSYVTLEGGLKIPD 177
P ++W R+SRED L+ S + L TS +E L DD D+E S V LEGGL IP+
Sbjct: 320 PEKKWRKRISREDSSLQGSGDGRRILTTSSCEEEELDDFDDADDNERSSVQLEGGLNIPE 379
Query: 178 NIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFSGMFQPSIIV 237
IF LFDYQ+VGVQWLWELHCQ+AGGIIGDEMGLGKT+QVLSFLG+LHFS M++PSII+
Sbjct: 380 CIFRKLFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGSLHFSKMYKPSIII 439
Query: 238 CPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXX 297
CPVTLLRQW+REA KWYP FHVE+LHDSAQDS K Q
Sbjct: 440 CPVTLLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKASESDYDSESSVDSDHEPKS 499
Query: 298 XXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEV 357
N++KW+SL+NRV SESGLLITTYEQLR+ G++LL+IEWGYAVLDEGH+IRNPN+++
Sbjct: 500 K--NTKKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNSDI 557
Query: 358 TLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYAN 417
TLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEF+VPI VGGYAN
Sbjct: 558 TLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYAN 617
Query: 418 ATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRMKADV 477
A+PLQVSTA YRCAVVLRDLIMPYLLRRMKADV
Sbjct: 618 ASPLQVSTA----------------------------YRCAVVLRDLIMPYLLRRMKADV 649
Query: 478 NAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLSGIDVMRKICNHPDLL 537
NA L KTEHVLFCSLT EQ S+YRAFLAS+EVE+I DGNRNSL GIDVMRKICNHPDLL
Sbjct: 650 NAHLTKKTEHVLFCSLTVEQRSTYRAFLASSEVEQIFDGNRNSLYGIDVMRKICNHPDLL 709
Query: 538 ERDHALSNPDYGNPERSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHV 597
ER+H+ NPDYGNPERSGKMKVVA+VL VWK+QGHRVLLF QTQQMLDI E+FL + +
Sbjct: 710 EREHSHQNPDYGNPERSGKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYS 769
Query: 598 YRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTD 657
YRRMDG TPVK RMALIDEFN S ++FVF+LTTKVGGLGTNLTGANRVIIFDPDWNPS D
Sbjct: 770 YRRMDGLTPVKQRMALIDEFNNSEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSND 829
Query: 658 MQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDM 717
MQARERAWRIGQK+DVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQ+RFFKARDM
Sbjct: 830 MQARERAWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDM 889
Query: 718 KDLFILNVDGDT-GSTETSNIFSQISEEVNVIGSHIDNQDKHQ----YNQTAEAGSGDDD 772
KDLFIL DGD+ STETSNIFSQ++EE+N++G D + + ++TAE S D
Sbjct: 890 KDLFILKDDGDSNASTETSNIFSQLAEEINIVGVQSDKKPESDTQLALHKTAEGSSEQTD 949
Query: 773 V---DNDGESPRGSLRXXXXXXXXXXXXIDEETNILKSLFDANGIHSAMNHDVIMNAHD- 828
V D GE+ +DEETNILKSLFDA+GIHSA+NHD IMNA+D
Sbjct: 950 VEMTDKTGEA------------------MDEETNILKSLFDAHGIHSAVNHDAIMNANDE 991
Query: 829 GEKMRLDEQASQVAQRAAEALRQSRILRSNDSVSVPTWTGRSGAAGAPSSVRRKFGSTVN 888
EKMRL+ QASQVAQRAAEALRQSR+LRS +S+SVPTWTGRSG AGAPSSVRR+FGSTVN
Sbjct: 992 EEKMRLEHQASQVAQRAAEALRQSRMLRSRESISVPTWTGRSGCAGAPSSVRRRFGSTVN 1051
Query: 889 PQLVNNSKAPDALPSNGTNKFNGFXXXXXXXXXXXXXXXXXXIRGNQEKAIGAGLEHQLG 948
+L P A+ NG IRG++E+AIG GLE
Sbjct: 1052 SRLTQTGDKPSAIK-------NGISAGLSSGKAPSSAELLNRIRGSREQAIGVGLE---- 1100
Query: 949 TSSTTNQARSTDVRSSRAAENSSGSQPEVLIRQICTFLXXXXXXXXXXXIVQHFKDRVSS 1008
Q +S+ SS ++ QPEVLIR+IC+F+ IV HF+D VS
Sbjct: 1101 ------QPQSSFPSSSGSSSRVGSLQPEVLIRKICSFVQQKGGSADTTSIVNHFRDIVSF 1154
Query: 1009 RELALFKNMLKEIAILQKGSNGSHWVLKPEYQ 1040
+ LFKN+LKEIA L+K N S WVLK EY+
Sbjct: 1155 NDKQLFKNLLKEIATLEKDQNRSFWVLKSEYK 1186
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 313 bits (803), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 201/609 (33%), Positives = 301/609 (49%), Gaps = 118/609 (19%)
Query: 167 VTLEG---GLKIPDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLG 223
+TL G +P I L+ +Q+ G+ WLW LH Q GGI+GD+MGLGKT+Q+ SFL
Sbjct: 358 ITLTGLNLSYTLPGKIATMLYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLA 417
Query: 224 ALHFSGMFQPSIIVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXX 283
L S + + +++V P TLL P + EL
Sbjct: 418 GLFHSKLIKRALVVAPKTLL-----------PHWMKEL---------------------- 444
Query: 284 XXXXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLR-----ILGDQLLDIE 338
G S K G+L+TTY+ +R + GD E
Sbjct: 445 ---ATVGLSQMTREYYGTSTKAREYDLHHILQGKGILLTTYDIVRNNTKALQGDDHYTDE 501
Query: 339 -------WGYAVLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFV 391
W Y +LDEGH I+NPN + ++ + HRII++G PIQN L ELW+LF+F
Sbjct: 502 DDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPIQNNLKELWALFNFS 561
Query: 392 FPGKLGVLPVFEAEFAVPIGVGGYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIV 451
PG LG F+ + I G NAT + +++ +
Sbjct: 562 CPGLLGDKNWFKQNYEHYILRGTDKNATDRE----------------QRIGSTV------ 599
Query: 452 LPCYRCAVVLRDLIMPYLLRRMKADV------NAQLPNKTEHVLFCSLTPEQVSSYRAFL 505
A LR+ I P+ LRR+K++V ++L K E V++ LT Q Y AFL
Sbjct: 600 ------AKNLREHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYEAFL 653
Query: 506 ASTEVEEILDGNRNSLSGIDVMRKICNHPDLLER----------DHALSNPDYGNPER-- 553
S V DG + L+ + +++KIC+HP LL + D L+ + G ER
Sbjct: 654 NSEIVLSAFDG--SPLAALTILKKICDHPLLLTKRAAEDVLEGMDSTLTQEEAGVAERLA 711
Query: 554 -------------------SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTS 594
S K+ + +L +GHRVL+F QT++ML++ ++ LT++
Sbjct: 712 MHIADNVDTDDFQTKNDSISCKLSFIMSLLENLIPEGHRVLIFSQTRKMLNLIQDSLTSN 771
Query: 595 GHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNP 654
G+ + R+DG T R+ ++EF + +F+LT++VGGLG LT A+RVI+ DP WNP
Sbjct: 772 GYSFLRIDGTTKAPDRLKTVEEFQEGHVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNP 831
Query: 655 STDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKA 714
STD Q+ +RA+RIGQ +DV VYRL+T T+EEK+Y +Q+YK L ++ +Q R+F
Sbjct: 832 STDNQSVDRAYRIGQTKDVIVYRLMTSATVEEKIYRKQVYKGGLFKTATEHKEQIRYFSQ 891
Query: 715 RDMKDLFIL 723
+D+++LF L
Sbjct: 892 QDLRELFSL 900
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 254 bits (649), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 167/538 (31%), Positives = 265/538 (49%), Gaps = 67/538 (12%)
Query: 176 PDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFSGMFQPSI 235
P+ + L YQ G+ +L ++ I+ DEMGLGKT+Q ++ L +L F P +
Sbjct: 266 PEFLKGLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASL-FEENLIPHL 324
Query: 236 IVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXX 295
++ P++ LR W+RE W P+ +V + +AQ A ++
Sbjct: 325 VIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQIS 384
Query: 296 XXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNA 355
K++ +L+T+YE + + L I+W ++DEGH+++N ++
Sbjct: 385 SESKQKRIKFD------------VLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDS 432
Query: 356 EVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGY 415
++ Q + HRI++TG P+QN L EL+ L F+ GK G L F+ E
Sbjct: 433 KLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEE---------- 482
Query: 416 ANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRMKA 475
++ +N + R L ++ P+LLRR+K
Sbjct: 483 -----------FKDINQEEQISR----------------------LHKMLAPHLLRRVKK 509
Query: 476 DVNAQLPNKTEHVLFCSLTPEQVSSYRA-FLASTEVEEILDGNRNSLSGIDV-MRKICNH 533
DV +P K E +L L+ Q Y+A F + +V G + SL+ I + +RK+C H
Sbjct: 510 DVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVLTKKGGAQISLNNIMMELRKVCCH 569
Query: 534 PDLLERDHAL---SNPDYGNP-ERSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFEN 589
P +LE + +N + E GK++++ +++ KEQGHRVL++ Q Q MLD+ E+
Sbjct: 570 PYMLEGVEPVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLED 629
Query: 590 FLTTSGHVYRRMDGHTPVKYRMALIDEFNASNE-IFVFILTTKVGGLGTNLTGANRVIIF 648
+ T Y R+DG R ID FNA N F F+L+T+ GGLG NL A+ VII+
Sbjct: 630 YCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIY 689
Query: 649 DPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYH----RQIYKHFLTNKI 702
D DWNP D+QA RA R+GQ V +YRLI RGTIEE++ + + +H + K+
Sbjct: 690 DSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKL 747
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 254 bits (649), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 186/588 (31%), Positives = 280/588 (47%), Gaps = 99/588 (16%)
Query: 146 DTSDQENLGAQDDLADHESSYVTLEGGLK-------IPDNIFE--------ALFDYQKVG 190
+ +D E L +D +D Y LE K I +NI E L +YQ G
Sbjct: 704 NATDDETLIENEDESDQAKHY--LESNEKYYLMAHSIKENINEQPSSLVGGKLREYQMNG 761
Query: 191 VQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFSGMFQ-PSIIVCPVTLLRQWKRE 249
++WL L+ GI+ DEMGLGKTVQV+S + L + + P ++V P ++L W+ E
Sbjct: 762 LRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSE 821
Query: 250 ANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLI 309
N W P H ++++ D RK
Sbjct: 822 INFWAPSIH-KIVYCGTPD--------------------------------ERRKL--FK 846
Query: 310 NRVTRSESGLLITTYEQLRILGD--QLLDIEWGYAVLDEGHKIRNPNAEVTLVCKQLQTV 367
++ + +L+TTYE L D +L I W Y ++DEGH+I+N + ++ K +
Sbjct: 847 EQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSS 906
Query: 368 HRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANATPLQVSTAY 427
HR+++TG P+QN L ELW+L +F+ P F F P G ++A +
Sbjct: 907 HRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAE---EALLS 963
Query: 428 RWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEH 487
N+L I R VLR P++LRR+K V +LP K E
Sbjct: 964 EEENLLII-------------------NRLHQVLR----PFVLRRLKHKVENELPEKIER 1000
Query: 488 VLFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLS-----GIDVMRKICNHPDLLERDHA 542
++ C + S+Y+ L VE+ L N+ S + +R ICNHP L +
Sbjct: 1001 LIRC-----EASAYQKLLMK-RVEDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSE 1054
Query: 543 LSN---PDYGNP---ERSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGH 596
N P + P GK++++ ++L K HRVL F ++LD+ E++LT G+
Sbjct: 1055 EVNNIIPKHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGY 1114
Query: 597 VYRRMDGHTPVKYRMALIDEFNAS-NEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPS 655
Y R+DG T R ALID FN S + F+F+L+ + GG+G NL A+ VI+FD DWNP
Sbjct: 1115 KYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQ 1174
Query: 656 TDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKIL 703
D+QA+ RA RIGQK+DV V R T ++EE+V +K + N+ +
Sbjct: 1175 VDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSI 1222
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 254 bits (649), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 186/588 (31%), Positives = 280/588 (47%), Gaps = 99/588 (16%)
Query: 146 DTSDQENLGAQDDLADHESSYVTLEGGLK-------IPDNIFE--------ALFDYQKVG 190
+ +D E L +D +D Y LE K I +NI E L +YQ G
Sbjct: 704 NATDDETLIENEDESDQAKHY--LESNEKYYLMAHSIKENINEQPSSLVGGKLREYQMNG 761
Query: 191 VQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFSGMFQ-PSIIVCPVTLLRQWKRE 249
++WL L+ GI+ DEMGLGKTVQV+S + L + + P ++V P ++L W+ E
Sbjct: 762 LRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSE 821
Query: 250 ANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLI 309
N W P H ++++ D RK
Sbjct: 822 INFWAPSIH-KIVYCGTPD--------------------------------ERRKL--FK 846
Query: 310 NRVTRSESGLLITTYEQLRILGD--QLLDIEWGYAVLDEGHKIRNPNAEVTLVCKQLQTV 367
++ + +L+TTYE L D +L I W Y ++DEGH+I+N + ++ K +
Sbjct: 847 EQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSS 906
Query: 368 HRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANATPLQVSTAY 427
HR+++TG P+QN L ELW+L +F+ P F F P G ++A +
Sbjct: 907 HRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAE---EALLS 963
Query: 428 RWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEH 487
N+L I R VLR P++LRR+K V +LP K E
Sbjct: 964 EEENLLII-------------------NRLHQVLR----PFVLRRLKHKVENELPEKIER 1000
Query: 488 VLFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLS-----GIDVMRKICNHPDLLERDHA 542
++ C + S+Y+ L VE+ L N+ S + +R ICNHP L +
Sbjct: 1001 LIRC-----EASAYQKLLMK-RVEDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSE 1054
Query: 543 LSN---PDYGNP---ERSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGH 596
N P + P GK++++ ++L K HRVL F ++LD+ E++LT G+
Sbjct: 1055 EVNNIIPKHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGY 1114
Query: 597 VYRRMDGHTPVKYRMALIDEFNAS-NEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPS 655
Y R+DG T R ALID FN S + F+F+L+ + GG+G NL A+ VI+FD DWNP
Sbjct: 1115 KYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQ 1174
Query: 656 TDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKIL 703
D+QA+ RA RIGQK+DV V R T ++EE+V +K + N+ +
Sbjct: 1175 VDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSI 1222
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 254 bits (649), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 186/588 (31%), Positives = 280/588 (47%), Gaps = 99/588 (16%)
Query: 146 DTSDQENLGAQDDLADHESSYVTLEGGLK-------IPDNIFE--------ALFDYQKVG 190
+ +D E L +D +D Y LE K I +NI E L +YQ G
Sbjct: 704 NATDDETLIENEDESDQAKHY--LESNEKYYLMAHSIKENINEQPSSLVGGKLREYQMNG 761
Query: 191 VQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFSGMFQ-PSIIVCPVTLLRQWKRE 249
++WL L+ GI+ DEMGLGKTVQV+S + L + + P ++V P ++L W+ E
Sbjct: 762 LRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSE 821
Query: 250 ANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLI 309
N W P H ++++ D RK
Sbjct: 822 INFWAPSIH-KIVYCGTPD--------------------------------ERRKL--FK 846
Query: 310 NRVTRSESGLLITTYEQLRILGD--QLLDIEWGYAVLDEGHKIRNPNAEVTLVCKQLQTV 367
++ + +L+TTYE L D +L I W Y ++DEGH+I+N + ++ K +
Sbjct: 847 EQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSS 906
Query: 368 HRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANATPLQVSTAY 427
HR+++TG P+QN L ELW+L +F+ P F F P G ++A +
Sbjct: 907 HRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAE---EALLS 963
Query: 428 RWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEH 487
N+L I R VLR P++LRR+K V +LP K E
Sbjct: 964 EEENLLII-------------------NRLHQVLR----PFVLRRLKHKVENELPEKIER 1000
Query: 488 VLFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLS-----GIDVMRKICNHPDLLERDHA 542
++ C + S+Y+ L VE+ L N+ S + +R ICNHP L +
Sbjct: 1001 LIRC-----EASAYQKLLMK-RVEDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSE 1054
Query: 543 LSN---PDYGNP---ERSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGH 596
N P + P GK++++ ++L K HRVL F ++LD+ E++LT G+
Sbjct: 1055 EVNNIIPKHFLPPIVRLCGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGY 1114
Query: 597 VYRRMDGHTPVKYRMALIDEFNAS-NEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPS 655
Y R+DG T R ALID FN S + F+F+L+ + GG+G NL A+ VI+FD DWNP
Sbjct: 1115 KYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQ 1174
Query: 656 TDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKIL 703
D+QA+ RA RIGQK+DV V R T ++EE+V +K + N+ +
Sbjct: 1175 VDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSI 1222
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 252 bits (643), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 171/539 (31%), Positives = 261/539 (48%), Gaps = 96/539 (17%)
Query: 183 LFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFS-GMFQPSIIVCPVT 241
L YQ G+QW+ L+ GI+ DEMGLGKT+Q ++ + L S + P +I+ P
Sbjct: 386 LRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDLHGPHLILAPKA 445
Query: 242 LLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGN 301
+L W+ E W P L+D G+
Sbjct: 446 VLPNWENEFALWAPSISA-FLYD-----------------------------------GS 469
Query: 302 SRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEVTLVC 361
K + R+ + +LIT Y+ + L I+W Y ++DEGH+++N +
Sbjct: 470 KEKRTEIRARIAGGKFNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECAL---A 526
Query: 362 KQLQTVHRI----IMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYAN 417
K L T +RI ++TG PIQN L ELWSL +F+ P + FE F P G A+
Sbjct: 527 KTLGTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSAS 586
Query: 418 ATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRMKADV 477
T + L I+ R L +I P+LLRR K++V
Sbjct: 587 LTDEEE---------LLIINR----------------------LHHVIRPFLLRRKKSEV 615
Query: 478 NAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEIL----DGNRNSLSGIDV-MRKICN 532
LP KT+ +L C ++ Q Y+ T+V + +G SL + + +RK CN
Sbjct: 616 EKFLPGKTQVILKCDMSAWQKLYYKQV---TDVGRVGLHSGNGKSKSLQNLTMQLRKCCN 672
Query: 533 HPDLLERDHALSNPDYG---NPE---RSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDI 586
HP L DY PE SGK +++ ++L K+ GHR+LLF Q +++D+
Sbjct: 673 HPYLF------VGADYNMCKKPEIVRASGKFELLDRLLPKLKKAGHRILLFSQMTRLIDL 726
Query: 587 FENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNE-IFVFILTTKVGGLGTNLTGANRV 645
E +L+ + ++Y R+DG T R L+ +FN + F+F+L+T+ GGLG NL A+ +
Sbjct: 727 LEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTI 786
Query: 646 IIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILK 704
IIFD DWNP D QA +RA RIGQK++V V+ L++ G+IEE + R K + K+++
Sbjct: 787 IIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGIDAKVIQ 845
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 248 bits (632), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 179/582 (30%), Positives = 263/582 (45%), Gaps = 134/582 (23%)
Query: 186 YQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFL--------GALHFSGMFQPSIIV 237
YQ+ G+ WL L K GI+ D+MGLGKT+Q + + G+ +F PSIIV
Sbjct: 1454 YQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVF-PSIIV 1512
Query: 238 CPVTLLRQWKREANKWYPKFHVELLH--DSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXX 295
CP TL+ W E K+ + +L SAQD ++Q
Sbjct: 1513 CPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQF------------------- 1553
Query: 296 XXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNA 355
+ ++IT+Y+ +R D L W Y +LDEGH I+N +
Sbjct: 1554 -------------------NNHNVIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKS 1594
Query: 356 EVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGY 415
++T KQL+ HR+I++G PIQN + ELWSLFDF+ PG LG F+A + P+
Sbjct: 1595 KITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARD 1654
Query: 416 ANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRMKA 475
+ +L E L +MP+LLRR K
Sbjct: 1655 PKCSAKDAEAG--------VLAME--------------------ALHKQVMPFLLRRTKE 1686
Query: 476 DVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEI-----LDGNRNS---------- 520
+V + LP K +C L+P Q+ Y F S+ +EI +DG+ +S
Sbjct: 1687 EVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKA 1746
Query: 521 ----LSGIDVMRKICNHPDLLERDH----------ALSN------PDYGNPERSGKMKVV 560
+ + K+C+HP L+ D A+ N + + S K+ +
Sbjct: 1747 STHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELHKVQHSPKLVAL 1806
Query: 561 AQVLNVWKEQG----------------HRVLLFCQTQQMLDIFENFLTTS---GHVYRRM 601
++L +E G HRVL+F Q + +LDI E L + Y R+
Sbjct: 1807 QEIL---EECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRL 1863
Query: 602 DGHTPVKYRMALIDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQAR 661
DG + R ++ FN+ I V +LTT VGGLG NLT A+ ++ + DWNP D QA
Sbjct: 1864 DGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAM 1923
Query: 662 ERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKIL 703
+RA R+GQKR V V+RLI RGT+EEKV Q +K + N ++
Sbjct: 1924 DRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVI 1965
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 179/582 (30%), Positives = 263/582 (45%), Gaps = 134/582 (23%)
Query: 186 YQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFL--------GALHFSGMFQPSIIV 237
YQ+ G+ WL L K GI+ D+MGLGKT+Q + + G+ +F PSIIV
Sbjct: 1485 YQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVF-PSIIV 1543
Query: 238 CPVTLLRQWKREANKWYPKFHVELLH--DSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXX 295
CP TL+ W E K+ + +L SAQD ++Q
Sbjct: 1544 CPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQF------------------- 1584
Query: 296 XXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNA 355
+ ++IT+Y+ +R D L W Y +LDEGH I+N +
Sbjct: 1585 -------------------NNHNVIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKS 1625
Query: 356 EVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGY 415
++T KQL+ HR+I++G PIQN + ELWSLFDF+ PG LG F+A + P+
Sbjct: 1626 KITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARD 1685
Query: 416 ANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRMKA 475
+ +L E L +MP+LLRR K
Sbjct: 1686 PKCSAKDAEAG--------VLAME--------------------ALHKQVMPFLLRRTKE 1717
Query: 476 DVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEI-----LDGNRNS---------- 520
+V + LP K +C L+P Q+ Y F S+ +EI +DG+ +S
Sbjct: 1718 EVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVAPTKA 1777
Query: 521 ----LSGIDVMRKICNHPDLLERDH----------ALSN------PDYGNPERSGKMKVV 560
+ + K+C+HP L+ D A+ N + + S K+ +
Sbjct: 1778 STHVFQALQYLLKLCSHPLLVLGDKVTEPVASDLAAMINGCSDIITELHKVQHSPKLVAL 1837
Query: 561 AQVLNVWKEQG----------------HRVLLFCQTQQMLDIFENFLTTS---GHVYRRM 601
++L +E G HRVL+F Q + +LDI E L + Y R+
Sbjct: 1838 QEIL---EECGIGSDASSSDGTLSVGQHRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRL 1894
Query: 602 DGHTPVKYRMALIDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQAR 661
DG + R ++ FN+ I V +LTT VGGLG NLT A+ ++ + DWNP D QA
Sbjct: 1895 DGSVVPEKRFEIVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAM 1954
Query: 662 ERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKIL 703
+RA R+GQKR V V+RLI RGT+EEKV Q +K + N ++
Sbjct: 1955 DRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVI 1996
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 170/531 (32%), Positives = 255/531 (48%), Gaps = 86/531 (16%)
Query: 173 LKIPDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALH-FSGMF 231
L P I + DYQ G+ WL L+ GI+ DEMGLGKT+Q +S L LH + G+
Sbjct: 179 LTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGIN 238
Query: 232 QPSIIVCPVTLLRQWKREANKWYPKFH-VELLHDSAQDSAPKKKQXXXXXXXXXXXXXXX 290
P ++V P + L W E ++ P V+ L + P++++
Sbjct: 239 GPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGN------PEERRHIR------------ 280
Query: 291 XXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKI 350
E L+ + + +T++E L W Y ++DE H+I
Sbjct: 281 ---------------EDLL---VAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRI 322
Query: 351 RNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPI 410
+N N+ ++ + T +R+++TG P+QN L ELW+L +F+ P F+ F
Sbjct: 323 KNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWF---- 378
Query: 411 GVGGYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLL 470
Q+S E D + VLR P+LL
Sbjct: 379 -----------QISG---------------------ENDQQEVVQQLHKVLR----PFLL 402
Query: 471 RRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLSGIDV-MRK 529
RR+K+DV LP K E +L ++ Q Y+A L G R L I + +RK
Sbjct: 403 RRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRK 462
Query: 530 ICNHPDLLERDHALSNPDYGNPER----SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLD 585
CNHP L + A P Y + +GKM ++ ++L KE+ RVL+F Q ++LD
Sbjct: 463 CCNHPYLFQ--GAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 586 IFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNA-SNEIFVFILTTKVGGLGTNLTGANR 644
I E++L G++Y R+DG+T R A I+ +N +E FVF+L+T+ GGLG NL A+
Sbjct: 521 ILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 580
Query: 645 VIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYK 695
VI++D DWNP D+QA++RA RIGQK++V V+R T IEEKV R K
Sbjct: 581 VILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKK 631
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 244 bits (622), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 166/531 (31%), Positives = 253/531 (47%), Gaps = 86/531 (16%)
Query: 173 LKIPDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALH-FSGMF 231
L P I + DYQ G+ WL L+ GI+ DEMGLGKT+Q +S L LH + G+
Sbjct: 179 LTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGIN 238
Query: 232 QPSIIVCPVTLLRQWKREANKWYPKFH-VELLHDSAQDSAPKKKQXXXXXXXXXXXXXXX 290
P ++V P + L W E ++ P V+ L + P++++
Sbjct: 239 GPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGN------PEERRHIR------------ 280
Query: 291 XXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKI 350
E L+ + + +T++E L W Y ++DE H+I
Sbjct: 281 ---------------EDLL---VAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRI 322
Query: 351 RNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPI 410
+N N+ ++ + T +R+++TG P+QN L ELW+L +F+ P F+ F +
Sbjct: 323 KNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQIS- 381
Query: 411 GVGGYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLL 470
G +Q L ++ P+LL
Sbjct: 382 --GENDQQEVVQQ-------------------------------------LHKVLRPFLL 402
Query: 471 RRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLSGIDV-MRK 529
RR+K+DV LP K E +L ++ Q Y+A L G R L I + +RK
Sbjct: 403 RRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRK 462
Query: 530 ICNHPDLLERDHALSNPDYGNPER----SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLD 585
CNHP L + A P Y + +GKM ++ ++L KE+ RVL+F Q ++LD
Sbjct: 463 CCNHPYLFQ--GAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 586 IFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNA-SNEIFVFILTTKVGGLGTNLTGANR 644
I E++L G++Y R+DG+T R A I+ +N +E FVF+L+T+ GGLG NL A+
Sbjct: 521 ILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 580
Query: 645 VIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYK 695
VI++D DWNP D+QA++RA RIGQK++V V+R T IEEKV R K
Sbjct: 581 VILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKK 631
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 244 bits (622), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 166/531 (31%), Positives = 253/531 (47%), Gaps = 86/531 (16%)
Query: 173 LKIPDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALH-FSGMF 231
L P I + DYQ G+ WL L+ GI+ DEMGLGKT+Q +S L LH + G+
Sbjct: 179 LTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGIN 238
Query: 232 QPSIIVCPVTLLRQWKREANKWYPKFH-VELLHDSAQDSAPKKKQXXXXXXXXXXXXXXX 290
P ++V P + L W E ++ P V+ L + P++++
Sbjct: 239 GPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGN------PEERRHIR------------ 280
Query: 291 XXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKI 350
E L+ + + +T++E L W Y ++DE H+I
Sbjct: 281 ---------------EDLL---VAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRI 322
Query: 351 RNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPI 410
+N N+ ++ + T +R+++TG P+QN L ELW+L +F+ P F+ F +
Sbjct: 323 KNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQIS- 381
Query: 411 GVGGYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLL 470
G +Q L ++ P+LL
Sbjct: 382 --GENDQQEVVQQ-------------------------------------LHKVLRPFLL 402
Query: 471 RRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLSGIDV-MRK 529
RR+K+DV LP K E +L ++ Q Y+A L G R L I + +RK
Sbjct: 403 RRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRK 462
Query: 530 ICNHPDLLERDHALSNPDYGNPER----SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLD 585
CNHP L + A P Y + +GKM ++ ++L KE+ RVL+F Q ++LD
Sbjct: 463 CCNHPYLFQ--GAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 586 IFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNA-SNEIFVFILTTKVGGLGTNLTGANR 644
I E++L G++Y R+DG+T R A I+ +N +E FVF+L+T+ GGLG NL A+
Sbjct: 521 ILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 580
Query: 645 VIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYK 695
VI++D DWNP D+QA++RA RIGQK++V V+R T IEEKV R K
Sbjct: 581 VILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKK 631
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 242 bits (617), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 181/595 (30%), Positives = 278/595 (46%), Gaps = 109/595 (18%)
Query: 131 EDMQLEDSEN---ANGCLDTSDQENLGA---QDDLADHESSYVTLEGGLKIPDNIFEALF 184
+D+ + +S+N +N L+ Q N Q+ + + S LEGG L
Sbjct: 357 QDIDITESDNNDDSNDLLEGQRQYNSAIHSIQEKVTEQPS---LLEGG---------ELR 404
Query: 185 DYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLG-ALHFSGMFQPSIIVCPVTLL 243
YQ G+QW+ L GI+ DEMGLGKT+Q +S + L G+ P +IV P +L
Sbjct: 405 SYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVPGPYLIVAPKAVL 464
Query: 244 RQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSR 303
W E W P L+D G
Sbjct: 465 PNWVNEFATWVPSI-AAFLYD-----------------------------------GRLE 488
Query: 304 KWESLINRVT-RSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEVTLVCK 362
+ +++ ++ + +LIT Y+ + L IEW Y ++DEGH+++N + + K
Sbjct: 489 ERKAIREKIAGEGKFNVLITHYDLIMRDKAFLKKIEWYYMIVDEGHRLKNHESAL---AK 545
Query: 363 QLQTVHRI----IMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANA 418
L T +RI ++TG PIQN L ELWSL +F+ P + FE F P G +
Sbjct: 546 TLLTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSVQNFEEWFNAPFADRGNVSL 605
Query: 419 TPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRMKADVN 478
T + L I+ R L +I P++LRR K +V
Sbjct: 606 TDEEE---------LLIIHR----------------------LHHVIRPFILRRKKDEVE 634
Query: 479 AQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVE-EILDGNRNSLSGIDV-MRKICNHPDL 536
LP KT+ +L C ++ Q Y+ V + G SL + + +RK CNHP
Sbjct: 635 KFLPGKTQVILKCDMSAWQKVYYKQVTDMGRVGLQTGSGKSKSLQNLTMQLRKCCNHP-- 692
Query: 537 LERDHALSNPDYG---NPE---RSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENF 590
+ DY PE SGK +++ ++L ++ GHR+LLF Q +++D+ E +
Sbjct: 693 ----YLFVGGDYNMWKKPEIVRASGKFELLDRLLPKLRKAGHRILLFSQMTRLIDVLEIY 748
Query: 591 LTTSGHVYRRMDGHTPVKYRMALIDEFNASNE-IFVFILTTKVGGLGTNLTGANRVIIFD 649
LT + + Y R+DG T R L+ +FN + F+F+L+T+ GGLG NL A+ VIIFD
Sbjct: 749 LTLNDYKYLRLDGTTKTDQRGLLLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTVIIFD 808
Query: 650 PDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILK 704
DWNP D QA +RA RIGQK++V V+ L++ G++EE + R K + K+++
Sbjct: 809 SDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGIDAKVIQ 863
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 167/551 (30%), Positives = 265/551 (48%), Gaps = 85/551 (15%)
Query: 182 ALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFSGMFQ-PSIIVCPV 240
L DYQ G+ +L I+ DEMGLGKTVQ +S LG L + P ++V P+
Sbjct: 624 TLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPL 683
Query: 241 TLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXG 300
+ L W +E KW P ++ +++ + S +Q
Sbjct: 684 STLANWAKEFRKWLPGMNI-IVYVGTRASREVCQQYEFYN-------------------- 722
Query: 301 NSRKWESLINRVTRSESGLLITTYEQLRILGDQ--LLDIEWGYAVLDEGHKIRNPNAEVT 358
E + R + + L+TTYE +L D+ L I+W Y ++DE H+++N A++
Sbjct: 723 -----EKKVGRPIKFNA--LLTTYEV--VLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLY 773
Query: 359 LVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANA 418
+ T +++++TG P+QN + ELW+L F+ PGK F V Y N
Sbjct: 774 TALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEF---------VENYKNL 824
Query: 419 TPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRMKADVN 478
+ S E H++ + P++LRR+ DV
Sbjct: 825 SSFNES--------------ELANLHLE------------------LRPHILRRVIKDVE 852
Query: 479 AQLPNKTEHVLFCSLTPEQVSSYRAFLAST--EVEEILDGNRNSLSGIDV-MRKICNHPD 535
LP K E +L ++P Q Y+ L ++ + + GN+ SL I V ++K CNHP
Sbjct: 853 KSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPF 912
Query: 536 LLER-DHALSNPDYGNPE------RSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFE 588
L E DH N + SGK+ ++ ++L +E HRVL+F Q +MLDI
Sbjct: 913 LFESADHGYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILA 972
Query: 589 NFLTTSGHVYRRMDGHTPVKYRMALIDEFNA-SNEIFVFILTTKVGGLGTNLTGANRVII 647
+L+ G ++R+DG T + R +D FNA +++ F F+L+T+ GGLG NL A+ V+I
Sbjct: 973 EYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVI 1032
Query: 648 FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ 707
FD DWNP D+QA RA RIGQ+ V +YR +T ++EE++ R K L + +++
Sbjct: 1033 FDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLN 1092
Query: 708 QKRFFKARDMK 718
+ + R+ K
Sbjct: 1093 AEGRLEKRETK 1103
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 237 bits (604), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 167/538 (31%), Positives = 258/538 (47%), Gaps = 93/538 (17%)
Query: 171 GGLKI---PDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALH- 226
GG ++ P I L DYQ G+ WL L+ GI+ DEMGLGKT+Q +S L LH
Sbjct: 179 GGTRLLTQPACIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHE 238
Query: 227 FSGMFQPSIIVCPVTLLRQWKREANKWYPKFH-VELLHDSAQDSAPKKKQXXXXXXXXXX 285
+ G+ P ++V P + L W E ++ P V+ L + P++++
Sbjct: 239 YRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGN------PEERRHIR------- 285
Query: 286 XXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLD 345
E L+ + + +T++E L W Y ++D
Sbjct: 286 --------------------EELL---VAGKFDICVTSFEMAIKEKTTLRRFSWRYIIID 322
Query: 346 EGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAE 405
E H+I+N N+ ++ + T +R+++TG P+QN L ELW+L +F+ P F+
Sbjct: 323 EAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEVFSSAETFDEW 382
Query: 406 FAVPIGVGGYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLI 465
F + G +Q L ++
Sbjct: 383 FQIS---GENDQQEVVQQ-------------------------------------LHKVL 402
Query: 466 MPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDG--NRNSLSG 523
P+LLRR+K+DV LP K E +L ++ Q Y+A L E+++G R L
Sbjct: 403 RPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDL--EVVNGGGERKRLLN 460
Query: 524 IDV-MRKICNHPDLLERDHALSNPDYGNPER----SGKMKVVAQVLNVWKEQGHRVLLFC 578
I + +RK CNHP L + A P Y + +GKM ++ ++L K++ RVL+F
Sbjct: 461 IAMQLRKCCNHPYLFQ--GAEPGPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFS 518
Query: 579 QTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNA-SNEIFVFILTTKVGGLGT 637
Q ++LDI E++L G+ Y R+DG+T R A I+ +N +E FVF+L+T+ GGLG
Sbjct: 519 QMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGI 578
Query: 638 NLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYK 695
NL A+ VI++D DWNP D+QA++RA RIGQK++V V+R T IE KV R K
Sbjct: 579 NLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKK 636
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 237 bits (604), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 167/538 (31%), Positives = 258/538 (47%), Gaps = 93/538 (17%)
Query: 171 GGLKI---PDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALH- 226
GG ++ P I L DYQ G+ WL L+ GI+ DEMGLGKT+Q +S L LH
Sbjct: 179 GGTRLLTQPACIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHE 238
Query: 227 FSGMFQPSIIVCPVTLLRQWKREANKWYPKFH-VELLHDSAQDSAPKKKQXXXXXXXXXX 285
+ G+ P ++V P + L W E ++ P V+ L + P++++
Sbjct: 239 YRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGN------PEERRHIR------- 285
Query: 286 XXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLD 345
E L+ + + +T++E L W Y ++D
Sbjct: 286 --------------------EELL---VAGKFDICVTSFEMAIKEKTTLRRFSWRYIIID 322
Query: 346 EGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAE 405
E H+I+N N+ ++ + T +R+++TG P+QN L ELW+L +F+ P F+
Sbjct: 323 EAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEVFSSAETFDEW 382
Query: 406 FAVPIGVGGYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLI 465
F + G +Q L ++
Sbjct: 383 FQIS---GENDQQEVVQQ-------------------------------------LHKVL 402
Query: 466 MPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDG--NRNSLSG 523
P+LLRR+K+DV LP K E +L ++ Q Y+A L E+++G R L
Sbjct: 403 RPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDL--EVVNGGGERKRLLN 460
Query: 524 IDV-MRKICNHPDLLERDHALSNPDYGNPER----SGKMKVVAQVLNVWKEQGHRVLLFC 578
I + +RK CNHP L + A P Y + +GKM ++ ++L K++ RVL+F
Sbjct: 461 IAMQLRKCCNHPYLFQ--GAEPGPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFS 518
Query: 579 QTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNA-SNEIFVFILTTKVGGLGT 637
Q ++LDI E++L G+ Y R+DG+T R A I+ +N +E FVF+L+T+ GGLG
Sbjct: 519 QMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGI 578
Query: 638 NLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYK 695
NL A+ VI++D DWNP D+QA++RA RIGQK++V V+R T IE KV R K
Sbjct: 579 NLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAYKK 636
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 234 bits (597), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 173/594 (29%), Positives = 266/594 (44%), Gaps = 117/594 (19%)
Query: 186 YQKVGVQWLWE----LH--CQKAGGIIGDEMGLGKTVQVLSFLGALHFSG-----MFQPS 234
+Q+ GVQ++++ LH G I+ D+MGLGKT+Q ++ L L G M + +
Sbjct: 183 HQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMVKKA 242
Query: 235 IIVCPVTLLRQWKREANKWY-PKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXX 293
IIV P +L+ W+ E KW + + L +S +D
Sbjct: 243 IIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVL---------------------- 280
Query: 294 XXXXXXGNSRKWESLINRVTRSESGL--LITTYEQLRILGDQLLDIE-WGYAVLDEGHKI 350
S I+ TR S L LI +YE R+ + E + DE H++
Sbjct: 281 -------------SGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRL 327
Query: 351 RNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPI 410
+N L R++++G P+QN L E +++ +F PG LG F + PI
Sbjct: 328 KNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPI 387
Query: 411 GVGGYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLL 470
G AT E + L R A L + ++L
Sbjct: 388 ICGREPTAT---------------------------EEEKNLAADRSAE-LSSKVNQFIL 419
Query: 471 RRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNS---LSGIDVM 527
RR A ++ LP K V+ C +T Q + Y F++S ++ L N L+ I +
Sbjct: 420 RRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNLKRALADNAKQTKVLAYITAL 479
Query: 528 RKICNHPDLLE---------------------------RDHALSNPDYGNPERSGKMKVV 560
+K+CNHP L+ R A + D E SGKM V+
Sbjct: 480 KKLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKMHVL 539
Query: 561 AQVL-NVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFN- 618
+++L N+ ++ R++L Q LD+F + + R+DG T + R L++ N
Sbjct: 540 SRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNRLND 599
Query: 619 ASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRL 678
+ + F F+L++K GG G NL GANR+++FDPDWNP+ D QA R WR GQK+ V VYR
Sbjct: 600 PTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRF 659
Query: 679 ITRGTIEEKVYHRQIYKHFLTNKILKNPQ------QKRFFKARDMKDLFILNVD 726
++ GTIEEKVY RQ+ K L K++++ Q Q D++DLF + D
Sbjct: 660 LSTGTIEEKVYQRQMSKEGL-QKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGD 712
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 229 bits (585), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 159/540 (29%), Positives = 259/540 (47%), Gaps = 96/540 (17%)
Query: 176 PDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFSGMFQPSI 235
P+ + L YQ G+ +L +K I+ DEMGLGKT+Q ++FL +L F P +
Sbjct: 218 PEFLTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASL-FEENLSPHL 276
Query: 236 IVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXX 295
+V P++ +R W+RE W P +V + ++
Sbjct: 277 VVAPLSTIRNWEREFATWAPHMNVVMYTGDSE---------------------------- 308
Query: 296 XXXXGNSRKWES--LINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNP 353
WE + +S+ +L+TTYE + L I+W ++DEGH+++N
Sbjct: 309 ----ARDVIWEHEFYFSEGRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQ 364
Query: 354 NAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVG 413
+++ Q + H +++TG P+QN L EL++L F+ K G L
Sbjct: 365 KSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGSL-------------- 410
Query: 414 GYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRM 473
EK + KE I L ++ P+LLRR+
Sbjct: 411 -------------------------EKFQDINKEEQISR--------LHQMLAPHLLRRL 437
Query: 474 KADV-NAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNS-LSGIDV-MRKI 530
K DV ++P K E +L ++ +Q Y+A + T ++L R++ +S + + +R++
Sbjct: 438 KKDVLKDKVPPKKELILRVDMSSQQKEVYKAVI--TNNYQVLTKKRDAKISNVLMKLRQV 495
Query: 531 CNHPDLL---ERDHALSNPDYGNP-ERSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDI 586
C+HP LL E +N + E SGK++++ +++ KEQGHRVL++ Q Q L +
Sbjct: 496 CSHPYLLPDFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYL 555
Query: 587 FENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNE-IFVFILTTKVGGLGTNLTGANRV 645
E++ T Y R+DG R ID FNA N F F+L+T+ GG+G NL A+ V
Sbjct: 556 LEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTV 615
Query: 646 IIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVY----HRQIYKHFLTNK 701
II+D DWNP D+QA R R+GQ V +YRLI +GT+EE++ ++ + +H + K
Sbjct: 616 IIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVVGK 675
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 159/540 (29%), Positives = 259/540 (47%), Gaps = 96/540 (17%)
Query: 176 PDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFSGMFQPSI 235
P+ + L YQ G+ +L +K I+ DEMGLGKT+Q ++FL +L F P +
Sbjct: 177 PEFLTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASL-FEENLSPHL 235
Query: 236 IVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXX 295
+V P++ +R W+RE W P +V + ++
Sbjct: 236 VVAPLSTIRNWEREFATWAPHMNVVMYTGDSE---------------------------- 267
Query: 296 XXXXGNSRKWES--LINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNP 353
WE + +S+ +L+TTYE + L I+W ++DEGH+++N
Sbjct: 268 ----ARDVIWEHEFYFSEGRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQ 323
Query: 354 NAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVG 413
+++ Q + H +++TG P+QN L EL++L F+ K G L
Sbjct: 324 KSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGSL-------------- 369
Query: 414 GYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRM 473
EK + KE I L ++ P+LLRR+
Sbjct: 370 -------------------------EKFQDINKEEQISR--------LHQMLAPHLLRRL 396
Query: 474 KADV-NAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNS-LSGIDV-MRKI 530
K DV ++P K E +L ++ +Q Y+A + T ++L R++ +S + + +R++
Sbjct: 397 KKDVLKDKVPPKKELILRVDMSSQQKEVYKAVI--TNNYQVLTKKRDAKISNVLMKLRQV 454
Query: 531 CNHPDLL---ERDHALSNPDYGNP-ERSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDI 586
C+HP LL E +N + E SGK++++ +++ KEQGHRVL++ Q Q L +
Sbjct: 455 CSHPYLLPDFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYL 514
Query: 587 FENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNE-IFVFILTTKVGGLGTNLTGANRV 645
E++ T Y R+DG R ID FNA N F F+L+T+ GG+G NL A+ V
Sbjct: 515 LEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLSTRAGGIGINLATADTV 574
Query: 646 IIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVY----HRQIYKHFLTNK 701
II+D DWNP D+QA R R+GQ V +YRLI +GT+EE++ ++ + +H + K
Sbjct: 575 IIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEITKNKMLLEHLVVGK 634
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 227 bits (579), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 168/593 (28%), Positives = 263/593 (44%), Gaps = 117/593 (19%)
Query: 186 YQKVGVQWLWE----LH--CQKAGGIIGDEMGLGKTVQVLSFLGALHFSG-----MFQPS 234
+Q+ GVQ++++ LH G I+ D+MGLGKT+Q ++ L L G M + +
Sbjct: 183 HQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMVKKA 242
Query: 235 IIVCPVTLLRQWKREANKWY-PKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXX 293
IIV P +L+ W+ E KW + + L +S +D
Sbjct: 243 IIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVL---------------------- 280
Query: 294 XXXXXXGNSRKWESLINRVTRSESGL--LITTYEQLRILGDQLLDIE-WGYAVLDEGHKI 350
S I+ TR S L LI +YE R+ + E + DE H++
Sbjct: 281 -------------SGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRL 327
Query: 351 RNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPI 410
+N L R++++G P+QN L E +++ +F PG LG F + PI
Sbjct: 328 KNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPI 387
Query: 411 GVGGYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLL 470
G AT + + A + L + ++L
Sbjct: 388 ICGREPTATEEEKNLAADR----------------------------SAELSSKVNQFIL 419
Query: 471 RRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNS--LSGIDVMR 528
RR A ++ LP K V+ C +T Q ++Y L + D + + L+ I ++
Sbjct: 420 RRTNALLSNHLPPKIIEVVCCKMTTLQ-TTYNGCLCMQLKRALADNAKQTKVLAYITALK 478
Query: 529 KICNHPDLLE---------------------------RDHALSNPDYGNPERSGKMKVVA 561
K+CNHP L+ R A + D E SGKM V++
Sbjct: 479 KLCNHPKLIYDTIKSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKMHVLS 538
Query: 562 QVL-NVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFN-A 619
++L N+ ++ R++L Q LD+F + + R+DG T + R L++ N
Sbjct: 539 RLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNRLNDP 598
Query: 620 SNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLI 679
+ + F F+L++K GG G NL GANR+++FDPDWNP+ D QA R WR GQK+ V VYR +
Sbjct: 599 TKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFL 658
Query: 680 TRGTIEEKVYHRQIYKHFLTNKILKNPQ------QKRFFKARDMKDLFILNVD 726
+ GTIEEKVY RQ+ K L K++++ Q Q D++DLF + D
Sbjct: 659 STGTIEEKVYQRQMSKEGL-QKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGD 710
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 222 bits (566), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 182/662 (27%), Positives = 299/662 (45%), Gaps = 101/662 (15%)
Query: 103 REAEPNKDSKRKRKRPLPGRQWTNRVSREDMQL-----EDSENANGCLDTSDQENLGAQD 157
++AEP K + R RKR + + R + ED E N L T ++ + Q+
Sbjct: 134 QKAEPEK-TGRGRKRKAASQYNNTKAKRAVAAMISRSKEDGETINSDL-TEEETVIKLQN 191
Query: 158 DLADHESSYVTLEGGLKIPDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQ 217
+L L GG L YQ GV+WL L GI+ D+MGLGKT+Q
Sbjct: 192 ELCP------LLTGG---------QLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQ 236
Query: 218 VLSFLGALHFSGMFQPSIIVCPVTLLRQWKREANKWYPKFHVELLH-DSAQDSAPKKKQX 276
+ FL L +G+ P +++ P++ L W E ++ P + + H D Q ++K
Sbjct: 237 TIGFLSHLKGNGLDGPYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKH- 295
Query: 277 XXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLL- 335
+ + + ++IT+YE ++L
Sbjct: 296 --------------------------------MPKTVGPKFPIVITSYEVAMNDAKRILR 323
Query: 336 DIEWGYAVLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGK 395
W Y V+DEGH+++N ++ K L+ +++++TG P+QN L+ELWSL +F+ P
Sbjct: 324 HYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILPDI 383
Query: 396 LGVLPVFEAEFAVPIGVGGYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCY 455
FE+ F A EK R +
Sbjct: 384 FTSHDEFESWFDFSEKNKNEATKEE-----------------EEKRRAQV---------- 416
Query: 456 RCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILD 515
L ++ P++LRRMK DV LP K E +++ ++T Q ++ L + +E L
Sbjct: 417 --VSKLHGILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQ-KKFQEHLVNNTLEAHLG 473
Query: 516 GN-------RNSLSGIDV-MRKICNHPDLLERD---HALSNPDYGNPERSGKMKVVAQVL 564
N + L+ + + +RK CNHPDLL+ L P + GK +++ ++L
Sbjct: 474 ENAIRGQGWKGKLNNLVIQLRKNCNHPDLLQGQIDGSYLYPPVEEIVGQCGKFRLLERLL 533
Query: 565 NVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEF-NASNEI 623
H+VL+F Q ++LDI + + + G R+DG + R I +F + +
Sbjct: 534 VRLFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSC 593
Query: 624 FVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGT 683
+F+L+T+ GGLG NLT A+ I++D DWNP D+QA +R RIGQ + V VYRL T +
Sbjct: 594 SIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQS 653
Query: 684 IEEKVYHRQIYKHFLTNKILKNPQ--QKRFFKARDMKDLFILNVDGDTGSTETSNIFSQI 741
IE +V R K L + ++ Q Q+R + +++ IL + + + E I + I
Sbjct: 654 IETRVLKRAYSKLKLEHVVIGQGQFHQERAKSSTPLEEEDILALLKEDETAEDKLIQTDI 713
Query: 742 SE 743
S+
Sbjct: 714 SD 715
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 218 bits (556), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 156/550 (28%), Positives = 249/550 (45%), Gaps = 94/550 (17%)
Query: 182 ALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFS-GMFQPSIIVCPV 240
ALF +Q + WL + I+ DEMGLGKTV +FL +L+F G+ +P +++ P+
Sbjct: 688 ALFAHQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFGVARPCLVLVPL 747
Query: 241 TLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXG 300
+ + W E + W P +V H SA+ A
Sbjct: 748 STMPNWLSEFSLWAPLLNVVEYHGSAKGRA-----------------------IIRDYEW 784
Query: 301 NSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEVTLV 360
+++ + T + +L+TTYE + L + W V+DEGH+++N +++ +
Sbjct: 785 HAKNSTGTTKKPTSYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSL 844
Query: 361 CKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANATP 420
HR+++TG TP
Sbjct: 845 LNTFSFQHRVLLTG--------------------------------------------TP 860
Query: 421 LQ--VSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRMKADVN 478
LQ + Y +N L + + F + + L+ L+ P++LRR+K D
Sbjct: 861 LQNNIGEMYNLLNFLQPSSFPSLSSFEERFHDLTSAEKVEE-LKKLVAPHMLRRLKKDAM 919
Query: 479 AQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILD------GNRNSLSGIDVMRKICN 532
+P KTE ++ LT Q YRA L T+ +IL ++ L+ + +RK+CN
Sbjct: 920 QNIPPKTERMVPVELTSIQAEYYRAML--TKNYQILRNIGKGVAQQSMLNIVMQLRKVCN 977
Query: 533 HPDLLERDHALSNPDYGNPE--------RSGKMKVVAQVLNVWKEQGHRVLLFCQTQQML 584
HP L+ + P+ G+ E S K+ ++ +L V ++GHRVL+F Q ++L
Sbjct: 978 HPYLI----PGTEPESGSLEFLHDMRIKASAKLTLLHSMLKVLHKEGHRVLIFSQMTKLL 1033
Query: 585 DIFENFLTTS--GHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKVGGLGTNLTGA 642
DI E++L + R+DG V R A I FN FVF+L+T+ GLG NL A
Sbjct: 1034 DILEDYLNIEFGPKTFERVDGSVAVADRQAAIARFNQDKNRFVFLLSTRACGLGINLATA 1093
Query: 643 NRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKI 702
+ VII+D D+NP D+QA RA RIGQ + + VYRL+ R ++EE++ K L
Sbjct: 1094 DTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQLAKKKLMLDQLF 1153
Query: 703 L-KNPQQKRF 711
+ K+ QK F
Sbjct: 1154 VNKSGSQKEF 1163
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 211 bits (536), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 163/575 (28%), Positives = 260/575 (45%), Gaps = 115/575 (20%)
Query: 186 YQKVGVQWLWELHCQKAGGIIG-DEMGLGKTVQVLSFLGALHF-SGMFQPSIIVCPVTLL 243
+Q GV WL + + ++ D+MGLGKT+Q +SFL L F G+ P +++CP+++
Sbjct: 54 HQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPLSVT 113
Query: 244 RQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSR 303
W E N++ P V + R
Sbjct: 114 DGWVSEINRFTPNLEV------------------------------LRYVGDKYCRLDMR 143
Query: 304 KWESLINRVTRSESG------LLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEV 357
K S+ + V +S G +L+TTY+ + D L I W YA++DE +++NPN+ +
Sbjct: 144 K--SMYDHVKKSSKGHFLPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVL 201
Query: 358 -TLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFA-VPIGVGGY 415
++ +Q R+++TG PIQN LTELW+L F P G L F + F G+ G
Sbjct: 202 YNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKETGDGLSGL 261
Query: 416 ANATPLQVSTAYRWVNILFILVREK---------VRPHIKEFDIVLPCYRCAVVLRDLIM 466
+ + + +++ F+L R K V P + E +++P V L+ I
Sbjct: 262 DVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPL----VSLQKKIY 317
Query: 467 PYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLSGIDV 526
+LR+ +LP E L+S N SL I +
Sbjct: 318 TSILRK-------ELPGLLE------------------LSSG------GSNHTSLQNIVI 346
Query: 527 -MRKICNHPDLL---------ERDHALSNPDYGNPERSGKMKVVAQVLNVWKEQGHRVLL 576
+RK C+HP L E +H + + SGK+ V+ Q+L + GHRVLL
Sbjct: 347 QLRKACSHPYLFPGIEPEPFEEGEHLV--------QASGKLLVLDQLLKRLHDSGHRVLL 398
Query: 577 FCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNE-----------IFV 625
F Q LDI ++F+ + Y R+DG + R A I F+A E FV
Sbjct: 399 FSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFV 458
Query: 626 FILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIE 685
F+++T+ GG+G NL A+ VI ++ DWNP D QA +RA RIGQ V L+T ++E
Sbjct: 459 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVE 518
Query: 686 EKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDL 720
E + R K L++ ++ + +++ D++ L
Sbjct: 519 EVILRRAERKLQLSHNVVGDNMEEKEEDGGDLRSL 553
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 211 bits (536), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 191/697 (27%), Positives = 288/697 (41%), Gaps = 187/697 (26%)
Query: 159 LADHESSYVTL------EGGLKIPDNIFEALFDYQKVGVQWLWELHCQKA---------- 202
L D S Y+ E +++P +I L +Q G++++WE Q
Sbjct: 689 LGDAHSGYIVNVVREIGEEAVRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGL 748
Query: 203 GGIIGDEMGLGKTVQVLSFLGALHFSGM------FQPSIIVCPVTLLRQWKREANKWYPK 256
G I+ MGLGKT QV++FL ++ M + ++IV PV +L W+ E KW P
Sbjct: 749 GCILAHTMGLGKTFQVIAFL----YTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPS 804
Query: 257 ----FHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLINRV 312
+ +L D +++ R+++ L
Sbjct: 805 EVKPLRIFMLGDVSRE----------------------------------RRFDLLTK-- 828
Query: 313 TRSESGLLITTYEQLRIL----GDQLLDIEWGYA----------VLDEGHKIRNPNAEVT 358
R + G+ + Y R L G + L+ G V DE H I+N A+ T
Sbjct: 829 WRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTT 888
Query: 359 LVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANA 418
KQ++ RI +TG+P+QN L E + + DFV G LG P F F PI G + N+
Sbjct: 889 QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNS 948
Query: 419 TPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRMKADVN 478
T V + +IL+ E+++ ++ D+ VV +DL
Sbjct: 949 TAEDVKIMNQRSHILY----EQLKGFVQRMDM-------NVVKKDL-------------- 983
Query: 479 AQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGN------RNSLSGIDVMRKICN 532
P KT V+ L+P Q Y+ FL E+ DG +N + V+ +I N
Sbjct: 984 ---PPKTVFVISVKLSPLQRILYQRFL---ELYGFSDGRTDERMRKNFFAAYQVLAQILN 1037
Query: 533 H---PDLLERDH----------------ALSNPDY----GNPER---------------- 553
H P L D + N DY G +R
Sbjct: 1038 HPGIPQLRSEDSKNGRRGSIVDIPDDCSSDENIDYNMVTGEKQRTMNDLQDKVDGYLQKD 1097
Query: 554 ----------------SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLT----- 592
SGKM ++ +L++ + G + L+F Q+ LD+ E +L+
Sbjct: 1098 WWVDLLQKNNYKVSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRH 1157
Query: 593 -------TSGHVYRRMDGHTPVKYRMALIDEFNASN--EIFVFILTTKVGGLGTNLTGAN 643
G + R+DG T R L+D FN + + +++T+ G LG NL AN
Sbjct: 1158 GKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAAN 1217
Query: 644 RVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKIL 703
RVII D WNP+ D+QA RAWR GQK+ V YRL+ RGTIEEK+Y RQ+ K L +++
Sbjct: 1218 RVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
Query: 704 KNPQQKRFFKARDMKDLFILNVDGDTGSTETSNIFSQ 740
Q R +M LF + D D S + I Q
Sbjct: 1278 DRQQVHRTISKEEMLHLFEFD-DDDEKSEAVTEISKQ 1313
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 211 bits (536), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 191/697 (27%), Positives = 288/697 (41%), Gaps = 187/697 (26%)
Query: 159 LADHESSYVTL------EGGLKIPDNIFEALFDYQKVGVQWLWELHCQKA---------- 202
L D S Y+ E +++P +I L +Q G++++WE Q
Sbjct: 689 LGDAHSGYIVNVVREIGEEAVRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGL 748
Query: 203 GGIIGDEMGLGKTVQVLSFLGALHFSGM------FQPSIIVCPVTLLRQWKREANKWYPK 256
G I+ MGLGKT QV++FL ++ M + ++IV PV +L W+ E KW P
Sbjct: 749 GCILAHTMGLGKTFQVIAFL----YTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPS 804
Query: 257 ----FHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLINRV 312
+ +L D +++ R+++ L
Sbjct: 805 EVKPLRIFMLGDVSRE----------------------------------RRFDLLTK-- 828
Query: 313 TRSESGLLITTYEQLRIL----GDQLLDIEWGYA----------VLDEGHKIRNPNAEVT 358
R + G+ + Y R L G + L+ G V DE H I+N A+ T
Sbjct: 829 WRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTT 888
Query: 359 LVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANA 418
KQ++ RI +TG+P+QN L E + + DFV G LG P F F PI G + N+
Sbjct: 889 QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNS 948
Query: 419 TPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRMKADVN 478
T V + +IL+ E+++ ++ D+ VV +DL
Sbjct: 949 TAEDVKIMNQRSHILY----EQLKGFVQRMDM-------NVVKKDL-------------- 983
Query: 479 AQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGN------RNSLSGIDVMRKICN 532
P KT V+ L+P Q Y+ FL E+ DG +N + V+ +I N
Sbjct: 984 ---PPKTVFVISVKLSPLQRILYQRFL---ELYGFSDGRTDERMRKNFFAAYQVLAQILN 1037
Query: 533 H---PDLLERDH----------------ALSNPDY----GNPER---------------- 553
H P L D + N DY G +R
Sbjct: 1038 HPGIPQLRSEDSKNGRRGSIVDIPDDCSSDENIDYNMVTGEKQRTMNDLQDKVDGYLQKD 1097
Query: 554 ----------------SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLT----- 592
SGKM ++ +L++ + G + L+F Q+ LD+ E +L+
Sbjct: 1098 WWVDLLQKNNYKVSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRH 1157
Query: 593 -------TSGHVYRRMDGHTPVKYRMALIDEFNASN--EIFVFILTTKVGGLGTNLTGAN 643
G + R+DG T R L+D FN + + +++T+ G LG NL AN
Sbjct: 1158 GKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAAN 1217
Query: 644 RVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKIL 703
RVII D WNP+ D+QA RAWR GQK+ V YRL+ RGTIEEK+Y RQ+ K L +++
Sbjct: 1218 RVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
Query: 704 KNPQQKRFFKARDMKDLFILNVDGDTGSTETSNIFSQ 740
Q R +M LF + D D S + I Q
Sbjct: 1278 DRQQVHRTISKEEMLHLFEFD-DDDEKSEAVTEISKQ 1313
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 211 bits (536), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 191/697 (27%), Positives = 288/697 (41%), Gaps = 187/697 (26%)
Query: 159 LADHESSYVTL------EGGLKIPDNIFEALFDYQKVGVQWLWELHCQKA---------- 202
L D S Y+ E +++P +I L +Q G++++WE Q
Sbjct: 689 LGDAHSGYIVNVVREIGEEAVRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGL 748
Query: 203 GGIIGDEMGLGKTVQVLSFLGALHFSGM------FQPSIIVCPVTLLRQWKREANKWYPK 256
G I+ MGLGKT QV++FL ++ M + ++IV PV +L W+ E KW P
Sbjct: 749 GCILAHTMGLGKTFQVIAFL----YTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPS 804
Query: 257 ----FHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLINRV 312
+ +L D +++ R+++ L
Sbjct: 805 EVKPLRIFMLGDVSRE----------------------------------RRFDLLTK-- 828
Query: 313 TRSESGLLITTYEQLRIL----GDQLLDIEWGYA----------VLDEGHKIRNPNAEVT 358
R + G+ + Y R L G + L+ G V DE H I+N A+ T
Sbjct: 829 WRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTT 888
Query: 359 LVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANA 418
KQ++ RI +TG+P+QN L E + + DFV G LG P F F PI G + N+
Sbjct: 889 QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNS 948
Query: 419 TPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRMKADVN 478
T V + +IL+ E+++ ++ D+ VV +DL
Sbjct: 949 TAEDVKIMNQRSHILY----EQLKGFVQRMDM-------NVVKKDL-------------- 983
Query: 479 AQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGN------RNSLSGIDVMRKICN 532
P KT V+ L+P Q Y+ FL E+ DG +N + V+ +I N
Sbjct: 984 ---PPKTVFVISVKLSPLQRILYQRFL---ELYGFSDGRTDERMRKNFFAAYQVLAQILN 1037
Query: 533 H---PDLLERDH----------------ALSNPDY----GNPER---------------- 553
H P L D + N DY G +R
Sbjct: 1038 HPGIPQLRSEDSKNGRRGSIVDIPDDCSSDENIDYNMVTGEKQRTMNDLQDKVDGYLQKD 1097
Query: 554 ----------------SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLT----- 592
SGKM ++ +L++ + G + L+F Q+ LD+ E +L+
Sbjct: 1098 WWVDLLQKNNYKVSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRH 1157
Query: 593 -------TSGHVYRRMDGHTPVKYRMALIDEFNASN--EIFVFILTTKVGGLGTNLTGAN 643
G + R+DG T R L+D FN + + +++T+ G LG NL AN
Sbjct: 1158 GKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAAN 1217
Query: 644 RVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKIL 703
RVII D WNP+ D+QA RAWR GQK+ V YRL+ RGTIEEK+Y RQ+ K L +++
Sbjct: 1218 RVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
Query: 704 KNPQQKRFFKARDMKDLFILNVDGDTGSTETSNIFSQ 740
Q R +M LF + D D S + I Q
Sbjct: 1278 DRQQVHRTISKEEMLHLFEFD-DDDEKSEAVTEISKQ 1313
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 207 bits (528), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 177/610 (29%), Positives = 272/610 (44%), Gaps = 106/610 (17%)
Query: 154 GAQDDLADHESSYV------TLEGGLKIPDNIFEALFD-YQKVGVQWLWELHCQKA-GGI 205
G D ++ E+S V ++ K D+ F+ + YQ VGV +L L+ + G I
Sbjct: 177 GVTDRYSEVETSTVRIVTQNDIDDACKAEDSDFQPILKPYQLVGVNFLLLLYKKGIEGAI 236
Query: 206 IGDEMGLGKTVQVLSFLGAL-HFSGMFQPSIIVCPVTLLRQWKREANKWYPKFHVELLHD 264
+ DEMGLGKT+Q +++L L + P ++VCP ++L W+RE KW P F V H
Sbjct: 237 LADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPASVLENWERELRKWCPSFTVLQYHG 296
Query: 265 SAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTY 324
+A+ SR+ SL +L+ Y
Sbjct: 297 AAR-------------------------------AAYSRELNSLSKAGKPPPFNVLLVCY 325
Query: 325 EQLRILGDQLLD-------IEWGYAVLDEGHKIRNPNAEVTLVCKQLQTV-----HRIIM 372
+Q D W ++DE H +++ N + K L +V R+++
Sbjct: 326 SLFERHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKN---SYRWKNLMSVARNANQRLML 382
Query: 373 TGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANATPLQVSTAYRWVNI 432
TG P+QN L ELWSL +F+ P +F E + + NA ++ T + +
Sbjct: 383 TGTPLQNDLHELWSLLEFMLPD------IFTTE---NVDLKKLLNAEDTELITRMKSILG 433
Query: 433 LFIL------VREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTE 486
FIL V +++ P I+ + VL + ++ I Y R +L +K+
Sbjct: 434 PFILRRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEY--RAASQARLVKLSSKSL 491
Query: 487 HVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLSGIDVMRKI------------CNHP 534
+ L +L Q+S+Y +L R S DV+R C+
Sbjct: 492 NSLAKALPKRQISNYFTQFRKIANHPLL--IRRIYSDEDVIRIARKLHPIGAFGFECSLD 549
Query: 535 DLLE--------RDHALSNPDYGNPERSG-----------KMKVVAQVLNVWKEQGHRVL 575
++E R H L YG + G K + +A++L K+ GHRVL
Sbjct: 550 RVIEEVKGFNDFRIHQLLF-QYGVNDTKGTLSDKHVMLSAKCRTLAELLPSMKKSGHRVL 608
Query: 576 LFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKVGGL 635
+F Q MLDI E L G YRR+DG T V R ++D FN IF +L+T+ GG
Sbjct: 609 IFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNNDKSIFACLLSTRAGGQ 668
Query: 636 GTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYK 695
G NLTGA+ VII D D+NP D QA +R RIGQ + VT++RL+T+ T++E +Y K
Sbjct: 669 GLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIAKRK 728
Query: 696 HFLTNKILKN 705
L +L++
Sbjct: 729 LVLDAAVLES 738
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 207 bits (526), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 153/519 (29%), Positives = 234/519 (45%), Gaps = 97/519 (18%)
Query: 183 LFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGAL-HFSGMFQPSIIVCPVT 241
L DYQ VG+QW+ L+ K GI+ DEMGLGKTVQV++ + L F G + P +I+ P
Sbjct: 981 LRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1040
Query: 242 LLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGN 301
+L WK E + W P + + +D K
Sbjct: 1041 VLVNWKSELHTWLPSVSC-IYYVGTKDQRSK----------------------------- 1070
Query: 302 SRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEVTLVC 361
L ++V + +L+TTYE + +L ++W Y ++DE ++++ + +
Sbjct: 1071 ------LFSQVKFEKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDL 1124
Query: 362 KQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANATPL 421
+ + R+++TG P+QN L ELWSL + + P F FA P G A
Sbjct: 1125 DRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPA----- 1179
Query: 422 QVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVV--LRDLIMPYLLRRMKADVNA 479
H E D + + V+ L ++ P++LRR DV
Sbjct: 1180 ----------------------HNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEG 1217
Query: 480 QLPNKTEHVLFCSLTPEQVSSYRAFLASTEV-----EEILDGNRNSLSGIDV-------- 526
LP K VL C ++ Q + Y A+ + +E L +N + +
Sbjct: 1218 SLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKNPIYQAKIYRTLNNRC 1277
Query: 527 --MRKICNHPDLLERDHALSNPDYGNP-------ERSGKMKVVAQVLNVWKEQGHRVLLF 577
+RK CNHP L N Y N GK+ ++ ++L + GHRVLLF
Sbjct: 1278 MELRKACNHP--------LLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLF 1329
Query: 578 CQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFN-ASNEIFVFILTTKVGGLG 636
++LDI E +L VYRR+DG T ++ R + I +FN + F+F+L+ + G G
Sbjct: 1330 STMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRG 1389
Query: 637 TNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTV 675
NL A+ V+I+DPD NP + QA RA RIGQ R+V V
Sbjct: 1390 LNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKV 1428
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 206 bits (523), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 164/564 (29%), Positives = 258/564 (45%), Gaps = 112/564 (19%)
Query: 186 YQKVGVQWLWELHCQKAGGIIG-DEMGLGKTVQVLSFLGALHF-SGMFQPSIIVCPVTLL 243
+Q GV WL + + ++ D+MGLGKT+Q +SFL L F G+ P +++CP+++
Sbjct: 54 HQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPLSVT 113
Query: 244 RQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSR 303
W E N++ P V G+
Sbjct: 114 DGWVSEINRFTPNLEV------------------------------------LRYVGD-- 135
Query: 304 KWESLINRVTRSESG------LLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEV 357
K+ L R + + G +L+TTY+ + D L I W YA++DE +++NPN+ +
Sbjct: 136 KYCRLDMRKSMYDHGHFLPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVL 195
Query: 358 -TLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYA 416
++ +Q R+++TG PIQN LTELW+L F P G L F + F G G
Sbjct: 196 YNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFK-ETGDG--- 251
Query: 417 NATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRMKAD 476
L VS KE Y+ L+ ++ ++LRR K+
Sbjct: 252 ----LDVSND-------------------KE------TYKS---LKFILGAFMLRRTKSL 279
Query: 477 V----NAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILD-----GNRNSLSGIDV- 526
+ N LP TE + L Q Y + L E+ +L+ N SL I +
Sbjct: 280 LIESGNLVLPPLTELTVMVPLVSLQKKIYTSIL-RKELPGLLELSSGGSNHTSLQNIVIQ 338
Query: 527 MRKICNHPDLL---------ERDHALSNPDYGNPERSGKMKVVAQVLNVWKEQGHRVLLF 577
+RK C+HP L E +H + + SGK+ V+ Q+L + GHRVLLF
Sbjct: 339 LRKACSHPYLFPGIEPEPFEEGEHLV--------QASGKLLVLDQLLKRLHDSGHRVLLF 390
Query: 578 CQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNA-SNEIFVFILTTKVGGLG 636
Q LDI ++F+ + Y R+DG + R A I F+ + FVF+++T+ GG+G
Sbjct: 391 SQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSVDGSNAFVFMISTRAGGVG 450
Query: 637 TNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKH 696
NL A+ VI ++ DWNP D QA +RA RIGQ V L+T ++EE + R K
Sbjct: 451 LNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKL 510
Query: 697 FLTNKILKNPQQKRFFKARDMKDL 720
L++ ++ + +++ D++ L
Sbjct: 511 QLSHNVVGDNMEEKEEDGGDLRSL 534
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 203 bits (516), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 152/519 (29%), Positives = 231/519 (44%), Gaps = 96/519 (18%)
Query: 183 LFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGAL-HFSGMFQPSIIVCPVT 241
L DYQ VG+QW+ L+ K GI+ DEMGLGKTVQV++ + L F G + P +I+ P
Sbjct: 981 LRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1040
Query: 242 LLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGN 301
+L WK E + W P + + +D K
Sbjct: 1041 VLVNWKSELHTWLPSVSC-IYYVGTKDQRSK----------------------------- 1070
Query: 302 SRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEVTLVC 361
V + +L+TTYE + +L ++W Y ++DE ++++ + +
Sbjct: 1071 -----LFSQEVCAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDL 1125
Query: 362 KQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANATPL 421
+ + R+++TG P+QN L ELWSL + + P F FA P G A
Sbjct: 1126 DRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPA----- 1180
Query: 422 QVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVV--LRDLIMPYLLRRMKADVNA 479
H E D + + V+ L ++ P++LRR DV
Sbjct: 1181 ----------------------HNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEG 1218
Query: 480 QLPNKTEHVLFCSLTPEQVSSYRAFLASTEV-----EEILDGNRNSLSGIDV-------- 526
LP K VL C ++ Q + Y A+ + +E L +N + +
Sbjct: 1219 SLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKNPIYQAKIYRTLNNRC 1278
Query: 527 --MRKICNHPDLLERDHALSNPDYGNP-------ERSGKMKVVAQVLNVWKEQGHRVLLF 577
+RK CNHP L N Y N GK+ ++ ++L + GHRVLLF
Sbjct: 1279 MELRKACNHP--------LLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLF 1330
Query: 578 CQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFN-ASNEIFVFILTTKVGGLG 636
++LDI E +L VYRR+DG T ++ R + I +FN + F+F+L+ + G G
Sbjct: 1331 STMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRG 1390
Query: 637 TNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTV 675
NL A+ V+I+DPD NP + QA RA RIGQ R+V V
Sbjct: 1391 LNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKV 1429
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 181 bits (460), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 143/473 (30%), Positives = 207/473 (43%), Gaps = 107/473 (22%)
Query: 343 VLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVF 402
V DE H I+N A+ T KQ++ RI +TG+P+QN L E + + DFV G LG P F
Sbjct: 852 VCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEF 911
Query: 403 EAEFAVPIGVGGYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLR 462
F PI G + N+T V + +IL+ E+++ ++ D+ VV +
Sbjct: 912 RNRFQNPIENGQHMNSTAEDVKIMNQRSHILY----EQLKGFVQRMDM-------NVVKK 960
Query: 463 DLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGN----- 517
DL P KT V+ L+P Q Y+ FL E+ DG
Sbjct: 961 DL-----------------PPKTVFVISVKLSPLQRILYQRFL---ELYGFSDGRTDERM 1000
Query: 518 -RNSLSGIDVMRKICNH---PDLLERDH----------------ALSNPDY----GNPER 553
+N + V+ +I NH P L D + N DY G +R
Sbjct: 1001 RKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDDCSSDENIDYNMVTGEKQR 1060
Query: 554 --------------------------------SGKMKVVAQVLNVWKEQGHRVLLFCQTQ 581
SGKM ++ +L++ + G + L+F Q+
Sbjct: 1061 TMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILSMSADVGDKALVFSQSI 1120
Query: 582 QMLDIFENFLT------------TSGHVYRRMDGHTPVKYRMALIDEFNASN--EIFVFI 627
LD+ E +L+ G + R+DG T R L+D FN + + +
Sbjct: 1121 PTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTL 1180
Query: 628 LTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEK 687
++T+ G LG NL ANRVII D WNP+ D+QA RAWR GQK+ V YRL+ RGTIEEK
Sbjct: 1181 ISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEK 1240
Query: 688 VYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFILNVDGDTGSTETSNIFSQ 740
+Y RQ+ K L +++ Q R +M LF + D D S + I Q
Sbjct: 1241 IYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFD-DDDEKSEAVTEISKQ 1292
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 18/115 (15%)
Query: 159 LADHESSYVTL------EGGLKIPDNIFEALFDYQKVGVQWLWELHCQKA---------- 202
L D S Y+ E +++P +I L +Q G++++WE Q
Sbjct: 689 LGDAHSGYIVNVVREIGEEAVRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGL 748
Query: 203 GGIIGDEMGLGKTVQVLSFL-GALHFSGM-FQPSIIVCPVTLLRQWKREANKWYP 255
G I+ MGLGKT QV++FL A+ + + ++IV PV +L W+ E KW P
Sbjct: 749 GCILAHTMGLGKTFQVIAFLYTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMP 803
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 179 bits (455), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 146/231 (63%), Gaps = 12/231 (5%)
Query: 547 DYGNPERSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTP 606
D + + GKM+ + +++ W +G ++LLF + +MLDI E FL G+ + R+DG TP
Sbjct: 520 DLSDVKHCGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTP 579
Query: 607 VKYRMALIDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWR 666
R +L+D+FNAS VF+++TK GGLG NL ANRV+IFDP+WNPS D+QA++R++R
Sbjct: 580 TNLRQSLVDDFNASPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFR 639
Query: 667 IGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKA-RDMKDLFILNV 725
GQKR V V+RL++ G++EE VY RQ+YK L+N + + R+F+ +D K+
Sbjct: 640 YGQKRHVVVFRLLSAGSLEELVYTRQVYKQQLSNIAVAGKMETRYFEGVQDCKEF----- 694
Query: 726 DGDTGSTETSNIFSQISEEV---NVIGSHID-NQDKHQYNQTAEAGSGDDD 772
G+ SN+F +S+++ +++ H D N D+++ E G +D+
Sbjct: 695 QGELFG--ISNLFRDLSDKLFTSDIVELHRDSNIDENKKRSLLETGVSEDE 743
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 172/371 (46%), Gaps = 78/371 (21%)
Query: 173 LKIPDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHF----- 227
+ +P +I L ++Q+ GV++++ L+ GGI+GD+MGLGKT+Q ++FL A++
Sbjct: 129 IHVPASINCRLLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDA 188
Query: 228 --SGMFQ----PSIIVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXX 281
S + + P +I+CP +++ W+ E ++W F V + H S +D
Sbjct: 189 GESCLLESDKGPVLIICPSSIIHNWESEFSRWASFFKVSVYHGSNRDM------------ 236
Query: 282 XXXXXXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGY 341
++ ++ +L+T+++ RI G L I W
Sbjct: 237 --------------------------ILEKLKARGVEVLVTSFDTFRIQGPVLSGINWEI 270
Query: 342 AVLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPV 401
+ DE H+++N +++ C +++T RI +TG +QNK++EL++LF++V PG LG
Sbjct: 271 VIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTVMQNKISELFNLFEWVAPGSLGTREH 330
Query: 402 FEAEFAVPIGVGGYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVL 461
F + P+ +G A A F+ + +K + H L
Sbjct: 331 FRDFYDEPLKLGQRATAPE------------RFVQIADKRKQH----------------L 362
Query: 462 RDLIMPYLLRRMKADVNAQL-PNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNS 520
L+ Y+LRR K + L K ++V+FC ++ Q Y+ + E++ +++ +
Sbjct: 363 GSLLRKYMLRRTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQLPEIQCLVNKDNPC 422
Query: 521 LSGIDVMRKIC 531
G + + C
Sbjct: 423 ACGSPLKQSEC 433
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/378 (30%), Positives = 174/378 (46%), Gaps = 73/378 (19%)
Query: 165 SYVTLEGGLKIPDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGA 224
+Y T + K+P + +L +YQ +G+ WL ++ +K GI+ DEMGLGKT+ ++ L
Sbjct: 518 TYSTTKVRTKLPFLLKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAH 577
Query: 225 LHFS-GMFQPSIIVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXX 283
L G++ P +IV P +++ W+ E KW P F + SA++ K++
Sbjct: 578 LACDKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQ--------- 628
Query: 284 XXXXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLD-IEWGYA 342
W L + + ITTY +L I ++ +W Y
Sbjct: 629 --------------------GWMKL------NSFHVCITTY-RLVIQDSKMFKRKKWKYL 661
Query: 343 VLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVF 402
+LDE H I+N ++ + RI++TG P+QN L ELWSL F+ P F
Sbjct: 662 ILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEF 721
Query: 403 EAEFAVPIGVGGYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLR 462
+ F PI G +EK+ + + R VLR
Sbjct: 722 KDWFCNPIA--GMVEG-------------------QEKINKEVID--------RLHNVLR 752
Query: 463 DLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNR--NS 520
P+LLRR+K DV QLP+K EHV+FC L+ Q + Y F+ASTE + L
Sbjct: 753 ----PFLLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDFIASTETQATLTSGSFFGM 808
Query: 521 LSGIDVMRKICNHPDLLE 538
+S I +RK+CNHPDL E
Sbjct: 809 ISIIMQLRKVCNHPDLFE 826
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 108/168 (64%), Gaps = 1/168 (0%)
Query: 555 GKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALI 614
GK++ +A +L K GHR L+F Q +MLD+ E F+ G+ Y R+DG TP + R L+
Sbjct: 1075 GKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLM 1134
Query: 615 DEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVT 674
FN + +IF+FIL+T+ GG+G NL GA+ VI +D DWNP+ D QA++R RIGQ R+V
Sbjct: 1135 QRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1194
Query: 675 VYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ-QKRFFKARDMKDLF 721
+YRLI+ TIEE + + K L N +++N + FFK D +LF
Sbjct: 1195 IYRLISESTIEENILKKANQKRVLDNLVIQNGEYNTEFFKKLDPMELF 1242
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 144 bits (362), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
Query: 554 SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMAL 613
SGK++ + +L + HRVLLF Q +ML+I E+++ + Y R+DG + + R +
Sbjct: 1205 SGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDM 1264
Query: 614 IDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDV 673
+ +F ++IFVF+L+T+ GGLG NLT A+ VI ++ DWNP+ D+QA +RA R+GQ +DV
Sbjct: 1265 VRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1324
Query: 674 TVYRLITRGTIEEKVYHRQIYKHFLTNKILK--NPQQKRFFKARDMKDLFI 722
TVYRLI + T+EEK+ HR K+ + ++ + Q F A D+ L +
Sbjct: 1325 TVYRLICKETVEEKILHRASQKNTVQQLVMTGGHVQGDDFLGAADVVSLLM 1375
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 181/444 (40%), Gaps = 87/444 (19%)
Query: 122 RQWTNRVSREDMQLEDSENANGCLDTSDQENLGAQDDLADHESSYVTLEGGLKIPDNIFE 181
+Q T+ E M+L + G L+ ++ ++ H S + + ++ P+
Sbjct: 528 KQITDAFDTEYMKLRQTSEMEGPLNDI---SVSGSSNIDLHNPSTMPVTSTVQTPELFKG 584
Query: 182 ALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGAL-HFSGMFQPSIIVCPV 240
L +YQ G+QWL + Q GI+ DEMGLGKT+Q ++FL L ++ P ++V P
Sbjct: 585 TLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 644
Query: 241 TLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXG 300
++L W E +++ P Q+ +K
Sbjct: 645 SVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINP---------------------- 682
Query: 301 NSRKWESLINRVTRSESG--LLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEVT 358
R+ R ++G +LIT+Y+ L ++W Y VLDE I++ ++
Sbjct: 683 ---------KRMYRRDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRW 733
Query: 359 LVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGV----GG 414
+R+++TG PIQN + ELW+L F+ P F F+ I GG
Sbjct: 734 KTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGG 793
Query: 415 YANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRRMK 474
N L R +L+ P++LRR+K
Sbjct: 794 TLNEHQLN---------------------------------RLHAILK----PFMLRRVK 816
Query: 475 ADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLSGIDV-------- 526
DV ++L KTE + C L+ Q + Y+A + E+ D NR + V
Sbjct: 817 KDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQFTDKKVLNLMNIVI 876
Query: 527 -MRKICNHPDLLERDHALSNPDYG 549
+RK+CNHP+L ER+ S +G
Sbjct: 877 QLRKVCNHPELFERNEGSSYLYFG 900
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 144 bits (362), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
Query: 554 SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMAL 613
SGK++ + +L + HRVLLF Q +ML+I E+++ + Y R+DG + + R +
Sbjct: 1238 SGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDM 1297
Query: 614 IDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDV 673
+ +F ++IFVF+L+T+ GGLG NLT A+ VI ++ DWNP+ D+QA +RA R+GQ +DV
Sbjct: 1298 VRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1357
Query: 674 TVYRLITRGTIEEKVYHRQIYKHFLTNKILK--NPQQKRFFKARDMKDLFI 722
TVYRLI + T+EEK+ HR K+ + ++ + Q F A D+ L +
Sbjct: 1358 TVYRLICKETVEEKILHRASQKNTVQQLVMTGGHVQGDDFLGAADVVSLLM 1408
Score = 136 bits (343), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 183/446 (41%), Gaps = 58/446 (13%)
Query: 122 RQWTNRVSREDMQLEDSENANGCLDTSDQENLGAQDDLADHESSYVTLEGGLKIPDNIFE 181
+Q T+ E M+L + G L+ ++ ++ H S + + ++ P+
Sbjct: 528 KQITDAFDTEYMKLRQTSEMEGPLNDI---SVSGSSNIDLHNPSTMPVTSTVQTPELFKG 584
Query: 182 ALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGAL-HFSGMFQPSIIVCPV 240
L +YQ G+QWL + Q GI+ DEMGLGKT+Q ++FL L ++ P ++V P
Sbjct: 585 TLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 644
Query: 241 TLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXG 300
++L W E +++ P Q+ +K
Sbjct: 645 SVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRVMFFSTWIISFDPWAVRQIC 704
Query: 301 NSRKWESLINRVTRSESG----LLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAE 356
++ +++ T S+ +LIT+Y+ L ++W Y VLDE I++ ++
Sbjct: 705 ICKRACNVVRFQTLSDMDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSI 764
Query: 357 VTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGV---- 412
+R+++TG PIQN + ELW+L F+ P F F+ I
Sbjct: 765 RWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEH 824
Query: 413 GGYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLRR 472
GG N L R +L+ P++LRR
Sbjct: 825 GGTLNEHQLN---------------------------------RLHAILK----PFMLRR 847
Query: 473 MKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLSGIDV------ 526
+K DV ++L KTE + C L+ Q + Y+A + E+ D NR + V
Sbjct: 848 VKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQFTDKKVLNLMNI 907
Query: 527 ---MRKICNHPDLLERDHALSNPDYG 549
+RK+CNHP+L ER+ S +G
Sbjct: 908 VIQLRKVCNHPELFERNEGSSYLYFG 933
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18
| chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 119/527 (22%), Positives = 213/527 (40%), Gaps = 98/527 (18%)
Query: 174 KIPDNIFEALFDYQKVGVQWLWELHCQKAGG--IIGDEMGLGKTVQVLSFLGALHFSGMF 231
KIP +I L +Q+ G++++ + GG ++ DEMGLGKT+Q ++ + S
Sbjct: 163 KIPSHIEPKLLPFQREGIEFILQ-----HGGRVLLADEMGLGKTLQAIAVTTCVQESW-- 215
Query: 232 QPSIIVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXX 291
P +I+ P +L W ++W LH D Q
Sbjct: 216 -PVLIIAPSSLRLHWATMIHQW--------LHVPPSDIVVVLPQP--------------- 251
Query: 292 XXXXXXXXGNSRKWESLINRVTRSESGLL-------ITTYEQLRILGDQLLDIEWGYAVL 344
G S K I V+ + G + I +Y+ + L L+ +++ +
Sbjct: 252 --------GGSNKCGFTI--VSSNTKGTIHLDGVFNIVSYDVVTKLDKLLMALDFKVVIA 301
Query: 345 DEGHKIRNPNAEVTLVCKQL--QTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVF 402
DE H ++N A+ T C + + + I+++G P ++ EL+ + ++P + +
Sbjct: 302 DESHFLKNGQAKRTSACLPVIKKAQYAILLSGTPALSRPIELFKQLEALYPDVYRNIHEY 361
Query: 403 EAEFAVPIGVGGYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLR 462
+ G Y A+ D + + V
Sbjct: 362 GGRYCKGGFFGTYQGAS---------------------------NHDELHNLMKATV--- 391
Query: 463 DLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLS 522
++RR+K DV +LP+K +F L + + A E++ + ++ +S
Sbjct: 392 ------MIRRLKKDVLTELPSKRRQQVFLDLAAKDMKQINALFH--ELKVVKSKIKDCIS 443
Query: 523 GIDVMRKICNHPDLLERDHALSNPDYGNPERSGKMKVVAQVLNVWKEQGHRVLLFCQTQQ 582
D+ +E++ L N Y + K+ V L E G + L+F Q
Sbjct: 444 EDDI-----KSLKFIEKN--LINKIYTD-SAVAKIPAVLDYLENVIEAGCKFLVFAHHQS 495
Query: 583 MLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKVGGLGTNLTGA 642
ML+ FL R+DG TP R AL+ +F +EI +L+ + G+G LT A
Sbjct: 496 MLEELHQFLKKKKVGCIRIDGSTPASSRQALVSDFQDKDEIKAAVLSIRAAGVGITLTAA 555
Query: 643 NRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVY 689
+ VI + W P +QA +RA RIGQ V ++ L+ T+++ ++
Sbjct: 556 STVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIW 602
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 152/638 (23%), Positives = 251/638 (39%), Gaps = 94/638 (14%)
Query: 117 RPLPGRQWTNRVSREDMQLEDSENANGCLDTSDQENLGAQDDLADHESSYVTLEGGL--K 174
R + +W + +RE + + E G +S LG V+ EG + K
Sbjct: 759 RSMDVSEWGEKTTRERRKFDRFEEEEG---SSFIGKLGFDAPNNSLNEGCVSSEGTVWDK 815
Query: 175 IPDNIFEALFDYQKVGVQWLW---------------ELHCQKAGGIIGDEMGLGKTVQVL 219
IP + ++ +Q+ G +++W E + G I+ G GKT +
Sbjct: 816 IP-GVKSQMYPHQQEGFEFIWKNLAGTIMLNELKDFENSDETGGCIMSHAPGTGKTRLTI 874
Query: 220 SFLGA-LHFSGMFQPSIIVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXX 278
FL A L +P +I+ P +LL W E KW + + S+ D K+
Sbjct: 875 IFLQAYLQCFPDCKP-VIIAPASLLLTWAEEFKKW--NISIPFHNLSSLDFTGKENSAAL 931
Query: 279 XXXXXXXXXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQ----- 333
+ K +S++ G+ YE+L + D+
Sbjct: 932 GLLMQKNATARSNNEIRMVKIYSWIKSKSIL--------GISYNLYEKLAGVKDEDKKTK 983
Query: 334 ----------LLDIEW------GYAVLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPI 377
L DI G VLDE H RN + + +++T RI+++G P
Sbjct: 984 MVREVKPDKELDDIREILMGRPGLLVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPF 1043
Query: 378 QNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANATPLQVSTAYRWVNILFILV 437
QN EL ++ P L L + + + G N L R + L ++
Sbjct: 1044 QNNFLELCNVLGLARPKYLERLTSTLKKSGMTVTKRGKKN---LGNEINNRGIEELKAVM 1100
Query: 438 REKVRPHIKEFDIV---LPCYR-CAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSL 493
V H+ + I+ LP R C VVL P L RR+ + KT++V
Sbjct: 1101 LPFV--HVHKGSILQSSLPGLRECVVVLNP---PELQRRVLESIEVTHNRKTKNVFETEH 1155
Query: 494 TPEQVSSYRAFLASTEV--EEILDGNRNSLSGIDVMRKICNHPDLLERDHALSNPDYGNP 551
VS + + ++ ++ +E L + L+ + +R +P
Sbjct: 1156 KLSLVSVHPSLVSRCKISEKERLSIDEALLAQLKKVRL--------------------DP 1195
Query: 552 ERSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTT-----SGHVYRRMDGHTP 606
+S K + + + + + + +VL+F Q L + L + G M G
Sbjct: 1196 NQSVKTRFLMEFVELCEVIKEKVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLE 1255
Query: 607 VKYRMALIDEFN-ASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAW 665
K R LI+EFN ++ VF+ +TK G +L GA+RVI+ D WNP+ + QA RA+
Sbjct: 1256 QKQRQTLINEFNDPKSKAKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAY 1315
Query: 666 RIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKIL 703
RIGQKR V Y L+ +GT E Y +Q K ++ +
Sbjct: 1316 RIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDRISELVF 1353
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 560 VAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNA 619
V V+NV G + ++F Q +MLD+ E L +SG YRR DG V R A + +FN
Sbjct: 1106 VGGVVNV---AGEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNT 1162
Query: 620 SNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLI 679
++ V I++ K LG N+ A VI+ D WNP+T+ QA +RA RIGQ R V V R
Sbjct: 1163 LPDVSVMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFT 1222
Query: 680 TRGTIEEKVYHRQIYKHFLTNKIL---KNPQQKRFFKARDMKDLFI 722
+ T+E+++ Q K + +N ++ D+ LF+
Sbjct: 1223 VKDTVEDRILALQQKKRKMVASAFGEHENGSRESHLSVEDLNYLFM 1268
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 560 VAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNA 619
V V+NV G + ++F Q +MLD+ E L +SG YRR DG V R A + +FN
Sbjct: 1063 VGGVVNV---AGEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNT 1119
Query: 620 SNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLI 679
++ V I++ K LG N+ A VI+ D WNP+T+ QA +RA RIGQ R V V R
Sbjct: 1120 LPDVSVMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFT 1179
Query: 680 TRGTIEEKVYHRQIYKHFLTNKIL---KNPQQKRFFKARDMKDLFI 722
+ T+E+++ Q K + +N ++ D+ LF+
Sbjct: 1180 VKDTVEDRILALQQKKRKMVASAFGEHENGSRESHLSVEDLNYLFM 1225
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 104/290 (35%), Gaps = 102/290 (35%)
Query: 158 DLADHESSYVTLEGGLKIPDNIFEALFDYQKVGVQWLWELHCQKA---GGIIGDEMGLGK 214
DL+ H S +G L + +L +Q++ + W+ + GGI+ D+ GLGK
Sbjct: 523 DLSQHSSEASPPDGVLAV------SLLRHQRIALSWMSQKETSGNPCFGGILADDQGLGK 576
Query: 215 TVQVLSFL-----------------GALHFSGMFQ----------------------PSI 235
TV ++ + G + S Q ++
Sbjct: 577 TVSTIALILTERSTPYLPCEEDSKNGGCNQSDHSQVVFNENKVVEDSLCKMRGRPAAGTL 636
Query: 236 IVCPVTLLRQWKREANKWYP-KFHVELL--HDSAQDSAPKKKQXXXXXXXXXXXXXXXXX 292
IVCP +L+RQW E K + H+ +L H ++ P +
Sbjct: 637 IVCPTSLMRQWADELRKKVTLEAHLSVLVYHGCSRTKDPHE------------------- 677
Query: 293 XXXXXXXGNSRKWESLINRVTRSESGLLITTY-----------EQLRILGDQLLDIEWGY 341
++ ++ITTY E + L L + W
Sbjct: 678 ---------------------LAKYDVVITTYSLVSKRKHMDCEPVEFLSGPLAQVSWFR 716
Query: 342 AVLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFV 391
VLDE I+N + ++ C L R ++G PIQN + +L+S F F+
Sbjct: 717 VVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFL 766
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 127/600 (21%), Positives = 222/600 (37%), Gaps = 103/600 (17%)
Query: 176 PDNIFEALFDYQKVGVQW--LWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFSGMFQP 233
P ++ L YQK + W + EL + GGI+ DEMG+GKT+Q +S + A +
Sbjct: 127 PLDLIIPLLKYQKEFLAWATIQELSAVR-GGILADEMGMGKTIQAISLVLARREVDRAKS 185
Query: 234 ------SIIVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXX 287
++++ P L QW E ++ +L Q PK+ +
Sbjct: 186 REAVGHTLVLVPPVALSQWLDEISRLTSPGSTRVL----QYHGPKRDKNVQKLMNYDFVL 241
Query: 288 XXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEG 347
++ R + G+ T L I+W ++DE
Sbjct: 242 TT----------------SPIVENEYRKDEGVDETM--------SPLHSIKWNRIIVDEA 277
Query: 348 HKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELW-----SLFDFVFPGKLGVL--- 399
H I+N ++ L+ +R ++G P+QN + EL+ S +F +
Sbjct: 278 HDIKNRSSRTAKAVFALEATYRWALSGTPLQNDVDELYSLVSYSFLNFFYSTYASFAFRH 337
Query: 400 --PVFEAEFAVPIGVGGYANATPLQVSTAYRWVNILFILV-------REKVRPHIKEFDI 450
F V +GG N PL + V + I+ + + + E D
Sbjct: 338 THITFARNVTVKFLIGG--NILPLSIPVRIENVPAVLIMQINTSLGGKRRDALSVVEADF 395
Query: 451 VLPCYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLA---- 506
Y+ + D + L N H+ + Q + ++
Sbjct: 396 YESLYKVSKTTFDGYIQ----------AGTLMNNYAHIFGLLIRLRQAVDHPYLVSYSSP 445
Query: 507 STEVEEILDGNRNSLSGIDVMRKICNHPDLLERDHALSNPDYGNPERSGKMKVVAQVLN- 565
S +LD N+N K C +D+ +++ ++ + K + +LN
Sbjct: 446 SGANANLLDANKN--------EKECGFGHDPSKDYFVTSSEHQASKTKLKGFRASSILNR 497
Query: 566 ----------------------VWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDG 603
V ++ + ++F Q LD+ L SG ++ G
Sbjct: 498 INLDDFKTSTKIEALREEIRFMVERDWSAKAIVFSQFTSFLDLISYALGKSGVSCVQLVG 557
Query: 604 HTPVKYRMALIDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARER 663
+ A + F + V +++ + GG+ NLT A+ V + DP WNP+ + QA++R
Sbjct: 558 SMSKAAKDAALKNFKEEPDCRVLLMSLQAGGVALNLTAASHVFMMDPWWNPAVERQAQDR 617
Query: 664 AWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFK--ARDMKDLF 721
RIGQ + V V R I T+EEK+ Q K L L + ++ K D+K LF
Sbjct: 618 IHRIGQCKPVRVVRFIMEKTVEEKILTLQKKKEDLFESTLGDSEEAVVQKLGEDDIKSLF 677
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 1/168 (0%)
Query: 554 SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMAL 613
S K+ + + L + G + +LF Q LD+ + L+ + + R+DG + R +
Sbjct: 862 SSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKV 921
Query: 614 IDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDV 673
+ EF+ I V +++ K GG+G NLT A+ + DP WNP+ + QA R RIGQ ++V
Sbjct: 922 LKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEV 981
Query: 674 TVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLF 721
+ R I +GT+EE++ Q K + + L + Q+ R + ++K LF
Sbjct: 982 KIRRFIVKGTVEERMEAVQARKQRMISGALTD-QEVRSARIEELKMLF 1028
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 118/560 (21%), Positives = 187/560 (33%), Gaps = 213/560 (38%)
Query: 103 REAEPNKDSKRKRKRPLPGRQWTNRVSREDMQLEDSEN----ANG-----CLDTSDQENL 153
++AE + +KRPL + + + +QL +N ANG C+ D +N+
Sbjct: 268 KKAEFTPEDFYSKKRPLSSKD-GSAIPTSLLQLNKVKNMNQDANGDENEQCISDGDLDNI 326
Query: 154 -GAQDDLADHESSYVTLEGGLKIPDNIFEALFDYQKVGVQWL------------------ 194
G D E ++ P + L YQK + W+
Sbjct: 327 VGVGDSSGLKE---------METPHTLLCELRPYQKQALHWMTQLEKGNCTDEAATMLHP 377
Query: 195 -WELHC--------------------------QKA-GGIIGDEMGLGKTVQVLSFLGALH 226
WE +C Q A GGI+ D MGLGKTV +S L A
Sbjct: 378 CWEAYCLADKRELVVYLNSFTGDATIHFPSTLQMARGGILADAMGLGKTVMTISLLLAHS 437
Query: 227 F----SGMFQPS-------------------------------------------IIVCP 239
+ +G P+ +IVCP
Sbjct: 438 WKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFLGFDKRLLEQKSVLQNGGNLIVCP 497
Query: 240 VTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXX 299
+TLL QWK E + + Q S PK +
Sbjct: 498 MTLLGQWKTEIEMHAKPGSLSVYVHYGQ-SRPKDAKLL---------------------- 534
Query: 300 GNSRKWESLINRVTRSESGLLITTYEQLRILGDQ--------LLDIEWGYAVLDEGHKIR 351
S+S ++ITTY L Q + + W VLDE H I+
Sbjct: 535 ---------------SQSDVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIK 579
Query: 352 NPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIG 411
N ++++L L R +TG PIQN L +L+SL F+ G
Sbjct: 580 NSKSQISLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGT------------- 626
Query: 412 VGGYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDLIMPYLLR 471
+ W N L V+ +E D R +++ ++ P +LR
Sbjct: 627 ---------------WAWWNKL-------VQKPFEEGD-----ERGLKLVQSILKPIMLR 659
Query: 472 RMKADVNAQ------LPNKTEHVLFCSLTPEQVSSYRAFLASTEVE--------EILDGN 517
R K+ + + LP V++C L+ + Y A ++V+ ++L
Sbjct: 660 RTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVEQGKVLHNY 719
Query: 518 RNSLSGIDVMRKICNHPDLL 537
+ L + +R+ C+HP L+
Sbjct: 720 ASILELLLRLRQCCDHPFLV 739
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 575 LLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEI--FVFILTTKV 632
++F Q ++ML + E L +G R+DG VK R +I EF V + + K
Sbjct: 710 VVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKA 769
Query: 633 GGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQ 692
G G NLT A+RV +FDP WNP+ + QA +R RIGQK++V + R+I R +IEE+V Q
Sbjct: 770 SGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQ 829
Query: 693 IYKHFLTNKILKNPQQK 709
K L N+ K Q+K
Sbjct: 830 QKKKNLANEAFKRRQKK 846
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%)
Query: 337 IEWGYAVLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKL 396
+EW +LDE H I+N NA+ + V +L+ R +TG PIQN +L+SL F+
Sbjct: 410 MEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPF 469
Query: 397 GVLPVFEAEFAVPIGVGGYANATPLQVSTA 426
+ +++ P+G G + LQV A
Sbjct: 470 SIKSYWQSLIQRPLGQGNKKGLSRLQVLMA 499
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 8/198 (4%)
Query: 505 LASTEVEEILDGNRNSLSGIDVMRKICNHPDLLERDHALSNPDYG----NPERSGKMKVV 560
L+ E++ G+ + +++++ + DL + + N +Y P ++ M V
Sbjct: 899 LSPCSDEDLPYGSSKIKAALEILQSLPKAHDLTDSNQISENREYSGLSITPVKNEGMSVD 958
Query: 561 AQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNAS 620
+ K G + ++F Q +ML++ E L +S YRR+DG V R + +FN
Sbjct: 959 VPI----KVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTL 1014
Query: 621 NEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLIT 680
E+ V I++ K LG N+ A V++ D WNP+T+ QA +RA RIGQ R VTV R
Sbjct: 1015 PEVTVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTV 1074
Query: 681 RGTIEEKVYHRQIYKHFL 698
+ T+E+++ Q K +
Sbjct: 1075 KDTVEDRILALQQKKRMM 1092
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 8/198 (4%)
Query: 505 LASTEVEEILDGNRNSLSGIDVMRKICNHPDLLERDHALSNPDYG----NPERSGKMKVV 560
L+ E++ G+ + +++++ + DL + + N +Y P ++ M V
Sbjct: 1057 LSPCSDEDLPYGSSKIKAALEILQSLPKAHDLTDSNQISENREYSGLSITPVKNEGMSVD 1116
Query: 561 AQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNAS 620
+ K G + ++F Q +ML++ E L +S YRR+DG V R + +FN
Sbjct: 1117 VPI----KVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTL 1172
Query: 621 NEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLIT 680
E+ V I++ K LG N+ A V++ D WNP+T+ QA +RA RIGQ R VTV R
Sbjct: 1173 PEVTVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTV 1232
Query: 681 RGTIEEKVYHRQIYKHFL 698
+ T+E+++ Q K +
Sbjct: 1233 KDTVEDRILALQQKKRMM 1250
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 118/561 (21%), Positives = 211/561 (37%), Gaps = 136/561 (24%)
Query: 175 IPDNIFEALFDYQKVGVQWLWELHCQKAGG--IIGDEMGLGKTVQVLSFLGALHFSGMFQ 232
+P + AL +Q G+++ + GG I DEMGLGKT+Q ++ G G
Sbjct: 196 LPRKLVNALLPFQLDGLRFGL-----RRGGRCFIADEMGLGKTLQAIAIAGCFISEGSI- 249
Query: 233 PSIIVCPVTLLRQWKREANKWYPK-----FHVELLHDSAQDSAPKKKQXXXXXXXXXXXX 287
++VCP L W E +W P H+ H P+
Sbjct: 250 --LVVCPAVLRFTWAEELERWLPSCLPSDVHLVFGHQDNPAYLPR--------------- 292
Query: 288 XXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEG 347
W ++ + +Y+ L+ L +L+ EW ++DE
Sbjct: 293 -----------------WPKVV-----------VISYKMLQHLRTTMLEREWALLIVDES 324
Query: 348 HKIR------NPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPV 401
H +R +P T++ + H I+++G P ++ +++ + ++PG LG
Sbjct: 325 HHLRCSKKKSDPPEIKTVLDVAEKVKHIILLSGTPSVSRPFDIFHQINMLWPGLLGKDKY 384
Query: 402 FEAEFAVPIG-VGGYANATPLQVSTAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVV 460
A+ +G V G S R + L IL+ + V
Sbjct: 385 EFAKTYCEVGLVRGIQGKIFQDFSKGTRLLE-LNILLNQTV------------------- 424
Query: 461 LRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNS 520
++RR+K + QLP K ++ L ++ A + +E ++ DG
Sbjct: 425 --------MIRRLKQHLLTQLPPKRRQIVTILLKKSDIALAMAIV--SEAKKQKDG---- 470
Query: 521 LSGIDVMRKICNHPDLLERDHA------LSNPDYGNPERSGKM--KVVAQVLNVWKEQGH 572
I + + + PD R N D N ++ ++ K+ Q L + K
Sbjct: 471 --AIAEVTEKSHEPDQNARGSNEAGHVNAENSDGPNSDKENQLCGKLSYQQLGIAKLSAF 528
Query: 573 R---------------------------VLLFCQTQQMLDIFENFLTTSGHVYRRMDGHT 605
R +++F ++LD + F+ G + R+DG T
Sbjct: 529 REWLSLHPLLSGLDYTPEEIDGDRSSTKMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTT 588
Query: 606 PVKYRMALIDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAW 665
+ R + F S+E+ + I+ + GG+G + + A V+ + PS +QA +RA
Sbjct: 589 LPRDRQLAVQSFQFSSEVKIAIIGVEAGGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAH 648
Query: 666 RIGQKRDVTVYRLITRGTIEE 686
R GQ V VY + T++E
Sbjct: 649 RRGQTSAVNVYIFCAKDTMDE 669
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Query: 571 GHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTT 630
G + ++F Q LD+ E L G + R DG K R ++ EFN + + + +++
Sbjct: 1127 GEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMSL 1186
Query: 631 KVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYH 690
K GG+G NLT A+ V + DP WNP+ + QA R RIGQKR V V R I + T+EE++
Sbjct: 1187 KAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQ 1246
Query: 691 RQIYKHFLTNKILKNPQQKRFFKARDMKDLF 721
Q K + L + ++ R + ++K LF
Sbjct: 1247 VQARKQRMIAGALTD-EEVRSARLEELKMLF 1276
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 124/540 (22%), Positives = 214/540 (39%), Gaps = 98/540 (18%)
Query: 202 AGGIIGDEMGLGKTVQVLSFLGALHFSGMFQPSIIVCPVTLLRQWKREANKWYPKFHVEL 261
G I+ G GKT ++SFL + ++V P ++ WKRE W + + L
Sbjct: 286 GGCILAHAPGSGKTFLLISFLQSFMAMDPQARPLVVLPKGIIESWKREFTLWEVE-KIPL 344
Query: 262 LHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLI 321
L + + +K+Q +W E +L
Sbjct: 345 LDFYSVKAESRKQQLKVLG-----------------------QW--------IKERSILF 373
Query: 322 TTYEQL-RILGD----------QLLDIEW-GYAVLDEGHKIRNPNAEVTLVCKQLQTVHR 369
Y+Q RI+ D +L+ +E +LDEGH RN + +++T +
Sbjct: 374 LGYQQFTRIICDDNFEAASEDCKLILLEKPTLLILDEGHTSRNKETYMLSSLARVKTRRK 433
Query: 370 IIMTGAPIQNKLTELWSLFDFVFP------GKLGVLPVFEAEFAVPIGVGGYANATPLQV 423
+++TG QN + E++++ D V P G ++ ++ +P G QV
Sbjct: 434 VVLTGTLFQNNVEEVFNILDLVRPKFLKRPGTREIVSRIMSKAEIPRGK---------QV 484
Query: 424 STAYRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDL--IMPYLLRRMKADVNAQL 481
+ + + F E F A +++DL + +L KAD + L
Sbjct: 485 NQSSSSIEGTFFAAVELTLQRSTNFSAK------ASLIKDLREMTRNILHYHKADFSGLL 538
Query: 482 PNKTEHVLFCSLTP---------------EQVSSYRAFLASTEVEEILDGN-RNSLSGID 525
P +E + +L+ +Q+S A +++ L+ N N G
Sbjct: 539 PGLSEFTVMLNLSSIQRDEVKGLRKMELFKQISLGAALYIHPKLKSFLEENPSNGEKGFS 598
Query: 526 VMRKICNHPDLLERDHALSNPDYGNPERSG-KMKVVAQVLNVWKEQGHRVLLFCQTQQML 584
N+ +++ D L + R G KMK +L + + G ++L+F Q +
Sbjct: 599 D-----NNTTVMKLDKMLKKINV----RDGVKMKFFLNLLALCESTGEKLLVFSQYIVPI 649
Query: 585 DIFENFLTTS-----GHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKVGGLGTNL 639
E +++ G + G + + R ++ FN S E VF + K G G +L
Sbjct: 650 KTLERLMSSMKGWRLGKEMFTITGDSSNEQREWSMERFNNSLEAKVFFGSIKACGEGISL 709
Query: 640 TGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLT 699
GA+RV+I D NPS QA RA+R GQKR V Y+L+ + EE+ Y K ++
Sbjct: 710 VGASRVLILDVHLNPSVTQQAVARAYRPGQKRKVYAYKLVAADSPEEENYETCTRKEMMS 769
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 73/126 (57%)
Query: 573 RVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKV 632
+ ++F Q MLD+ E + SG +RR+DG + R + EF+ ++ V +++ K
Sbjct: 894 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVKVMLMSLKA 953
Query: 633 GGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQ 692
G LG N+ A VI+ D WNP+T+ QA +RA RIGQ R VTV R+ + T+E+++ Q
Sbjct: 954 GNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILKLQ 1013
Query: 693 IYKHFL 698
K +
Sbjct: 1014 EEKRTM 1019
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 70/120 (58%)
Query: 573 RVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKV 632
+ ++F Q MLD+ E L + +RR+DG + R + EF+ ++ V I++ K
Sbjct: 828 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKA 887
Query: 633 GGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQ 692
G LG N+ A VI+ D WNP+T+ QA +RA RIGQ R VTV R+ + T+E+++ Q
Sbjct: 888 GNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILALQ 947
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 86.3 bits (212), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 117/532 (21%), Positives = 210/532 (39%), Gaps = 88/532 (16%)
Query: 202 AGGIIGDEMGLGKTVQVLSFLGALHFSGMFQPSIIVCPVTLLRQWKREANKWYPKFHVEL 261
G I+ G GKT ++SF+ + ++V P +L WK+E +W + + L
Sbjct: 371 GGCIMAHAPGSGKTFMIISFMQSFLAKYPQAKPLVVLPKGILPTWKKEFVRWQVE-DIPL 429
Query: 262 LHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLI 321
L + + + +Q ++W + +L
Sbjct: 430 LDFYSAKAENRAQQLSIL-----------------------KQW--------MEKKSILF 458
Query: 322 TTYEQLR-ILGDQ----------LLDIEWGYAVLDEGHKIRNPNAEVTLVCKQLQTVHRI 370
Y+Q I+ D LL + +LDEGH RN + + Q+QT ++
Sbjct: 459 LGYQQFSTIVCDDTTDSLSCQEILLKVP-SILILDEGHTPRNEDTNLLQSLAQVQTPRKV 517
Query: 371 IMTGAPIQNKLTELWSLFDFVFPGKLGV----LPVFEAEFAVPIGVGGYANATPLQVSTA 426
+++G QN + E++++ + V P L + V P V G + +++
Sbjct: 518 VLSGTLYQNHVKEVFNILNLVRPKFLKLDTSKSAVKRILAYTPCDVRGRLTGSNSDMAS- 576
Query: 427 YRWVNILFILVREKVRPHIKEFDIVLPCYRCAVVLRDL--IMPYLLRRMKADVNAQLPNK 484
+F E ++F + + V++DL + +L K D +LP
Sbjct: 577 ------MFNETVEHTLQKSEDFTVKIK------VIQDLREMTKKVLHYYKGDFLDELPGL 624
Query: 485 TEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLSGIDVMRKICNHPDL-LERDHAL 543
+ + +L+P+Q++ + L + V I HP L + D +
Sbjct: 625 ADFTVVLNLSPKQLNEVKK----------LRREKRKFKVSAVGSAIYLHPKLKVFSDKSD 674
Query: 544 SNPDYGNPERSGKM--------KVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTS- 594
D E K+ K ++N+ G ++L+F Q L E +
Sbjct: 675 DVSDTTMDEMVEKLDLNEGVKAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLERLAALAK 734
Query: 595 ----GHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDP 650
G + G+T + R ++ FN+S + +F + K G G +L GA+R++I D
Sbjct: 735 GWKLGKEVFVLTGNTSSEQREWSMETFNSSPDAKIFFGSIKACGEGISLVGASRILILDV 794
Query: 651 DWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKI 702
NPS QA RA+R GQK+ V YRLI + EE+ H +K + +K+
Sbjct: 795 PLNPSVTRQAIGRAFRPGQKKMVHAYRLIAGSSPEEE-DHNTCFKKEVISKM 845
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 12/181 (6%)
Query: 529 KICNHPDLLERDHALSNPDYGNPERSGKMKVVAQVLNVWKEQGHRVLLFCQ----TQQML 584
K N +LLE + + G S M V+ V V K + ++L+FC + L
Sbjct: 1036 KFFNPQELLEIEKLKHDAKKG----SKVMFVLNLVFRVVKRE--KILIFCHNIAPIRLFL 1089
Query: 585 DIFEN-FLTTSGHVYRRMDGHTPVKYRMALIDEFN-ASNEIFVFILTTKVGGLGTNLTGA 642
++FEN F G + G + R +ID+F + V + + G +LT A
Sbjct: 1090 ELFENVFRWKRGRELLTLTGDLELFERGRVIDKFEEPGGQSRVLLASITACAEGISLTAA 1149
Query: 643 NRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKI 702
+RVI+ D +WNPS QA RA+R GQ++ V VY+L++RGT+EE Y R +K ++++ I
Sbjct: 1150 SRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMI 1209
Query: 703 L 703
Sbjct: 1210 F 1210
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 6/164 (3%)
Query: 552 ERSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLD-IFENFLT----TSGHVYRRMDGHTP 606
E K K + + + +VL++ Q L I E + T G M G
Sbjct: 924 EEGVKTKFLIDFIRISGTVKEKVLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVE 983
Query: 607 VKYRMALIDEFNASNE-IFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAW 665
+ R +ID FN + V + +TK G +L GA+RV+I D WNPS + QA RA+
Sbjct: 984 QRDRQHMIDNFNKPDSGSKVLLASTKACSEGISLVGASRVVILDVVWNPSVESQAISRAF 1043
Query: 666 RIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQK 709
RIGQKR V +Y L+ + T E Y +Q KH ++ + + +K
Sbjct: 1044 RIGQKRAVFIYHLMVKDTSEWNKYCKQSEKHRISELVFSSTNEK 1087
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 554 SGKMKVVAQVLNVWKEQGHRVLLFCQT----QQMLDIFEN-FLTTSGHVYRRMDGHTPVK 608
S M V+ + V K + ++L+FC + ++FEN F G + G +
Sbjct: 1063 SKVMFVLNLIFRVVKRE--KILIFCHNIAPIRMFTELFENIFRWQRGREILTLTGDLELF 1120
Query: 609 YRMALIDEFN-ASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRI 667
R +ID+F N V + + G +LT A+RVI+ D +WNPS QA RA+R
Sbjct: 1121 ERGRVIDKFEEPGNPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRP 1180
Query: 668 GQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKIL 703
GQ++ V VY+L++RGT+EE Y R +K +++ I
Sbjct: 1181 GQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSCMIF 1216
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Query: 566 VWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEIFV 625
V ++ + ++F Q LD+ L G ++ G + R I++F + V
Sbjct: 675 VERDGSAKAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCRV 734
Query: 626 FILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIE 685
F+++ K GG+ NLT A+ V + DP WNP+ + QA++R RIGQ + + V R I T+E
Sbjct: 735 FLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVE 794
Query: 686 EKVYHRQIYKHFLTNKILKNPQQK-RFFKARDMKDLF 721
E++ Q K + + Q+ DM+ LF
Sbjct: 795 ERILRLQKKKELVFEGTVGGSQEAIGKLTEEDMRFLF 831
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 176 PDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGA------LHFSG 229
P ++ L YQK + W + AGGI+ DEMG+GKT+Q +S + A F
Sbjct: 132 PSDLIMPLLRYQKEFLAWATKQEQSVAGGILADEMGMGKTIQAISLVLARREVDRAQFGE 191
Query: 230 MFQPSIIVCPVTLLRQWKREANKW 253
++++CP+ + QW E ++
Sbjct: 192 AAGCTLVLCPLVAVSQWLNEIARF 215
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 620 SNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLI 679
S + +++ K G LG N+ A+ VI+ D WNP+T+ QA +RA RIGQ R VTV R+
Sbjct: 504 SGLVCAMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIA 563
Query: 680 TRGTIEEKV 688
+ T+EE++
Sbjct: 564 IKNTVEERI 572
>AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases;ATP
binding;nucleic acid binding | chr2:17013535-17021315
REVERSE LENGTH=1664
Length = 1664
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 22/167 (13%)
Query: 573 RVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNE---------- 622
+VL+F +LD+ E+ + RM G + I +F S +
Sbjct: 1451 KVLVFSSWNDVLDVLEHAFAANSITCIRMKGG---RKSQTAISKFKGSEKETQKTNSHQK 1507
Query: 623 ----IFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRL 678
I V +L + G G NL A VI+ +P NP+ + QA R RIGQ++ V+R
Sbjct: 1508 EEKSIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTLVHRF 1567
Query: 679 ITRGTIEEKVYHRQIYKHF----LTNKILKNPQQKRFFKARDMKDLF 721
+ GT+EE +Y K+ +++ KN Q ++F +D++ LF
Sbjct: 1568 LVSGTVEESIYKLNRNKNTNLSSFSSRNTKN-QDQQFLTLKDLESLF 1613
>AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / F-box family protein |
chr3:20162050-20167186 REVERSE LENGTH=1378
Length = 1378
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 573 RVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKV 632
+VL+F Q + + + E LTT+G + +M +M + F + ++
Sbjct: 1195 KVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMQSYNKMKALAMFQNDADCMALLMDGS- 1253
Query: 633 GGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKV 688
G LG +L+ V + +P W+ S + Q RA R+G KR + V L RGTIEE++
Sbjct: 1254 GALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMRGTIEEQM 1309