Miyakogusa Predicted Gene

Lj5g3v1094990.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1094990.2 Non Chatacterized Hit- tr|I0YNY9|I0YNY9_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,41.13,0.000000000000001,Stk19,Serine-threonine protein kinase 19;
SERINE/THREONINE-PROTEIN KINASE 19,NULL,CUFF.54762.2
         (159 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G20495.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Serine-thr...   196   6e-51
AT2G20495.2 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   139   1e-33

>AT2G20495.1 | Symbols:  | CONTAINS InterPro DOMAIN/s:
           Serine-threonine protein kinase 19 (InterPro:IPR018865);
           Has 155 Blast hits to 154 proteins in 53 species: Archae
           - 0; Bacteria - 0; Metazoa - 95; Fungi - 5; Plants - 34;
           Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).
           | chr2:8833180-8835034 FORWARD LENGTH=282
          Length = 282

 Score =  196 bits (498), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 105/162 (64%), Positives = 119/162 (73%), Gaps = 16/162 (9%)

Query: 5   PESS-SKGTKRRRDEHSDAVKTS---------------SLEDDLTFSDTLVALRIMRAQF 48
           PESS S+  KRRR+E  D V  S                LEDDLTFSDT VALR+MRAQF
Sbjct: 7   PESSTSEAKKRRREEDDDKVGCSHSAIEDGAVSEDQCLPLEDDLTFSDTSVALRMMRAQF 66

Query: 49  PQLPQASAEPFMLKSQLYSSVKDRTQVDRELESLRRDKVLRVFKLNTGQDDHAVMFLDDY 108
           P++ QAS  PF+L+SQLYSSV DRTQVDRELE LRR+KV+RVFKLNTGQDDHA++FLDDY
Sbjct: 67  PRIDQASIPPFILQSQLYSSVNDRTQVDRELECLRREKVVRVFKLNTGQDDHAIIFLDDY 126

Query: 109 LKQVDRVVKRMEGKIGGECEVFGWFKTHVLDSKLETGIEHQE 150
           L QVDR+VKRME K   + E+F  FK HVLDSKLE  I H E
Sbjct: 127 LNQVDRIVKRMEEKKQSDLEIFKLFKMHVLDSKLEPSIGHHE 168


>AT2G20495.2 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; CONTAINS InterPro DOMAIN/s:
           Serine-threonine protein kinase 19 (InterPro:IPR018865);
           Has 30201 Blast hits to 17322 proteins in 780 species:
           Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
           3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
           2996 (source: NCBI BLink). | chr2:8833180-8835034
           FORWARD LENGTH=255
          Length = 255

 Score =  139 bits (349), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/162 (51%), Positives = 95/162 (58%), Gaps = 43/162 (26%)

Query: 5   PESS-SKGTKRRRDEHSDAVKTS---------------SLEDDLTFSDTLVALRIMRAQF 48
           PESS S+  KRRR+E  D V  S                LEDDLTFSDT VALR+MRAQF
Sbjct: 7   PESSTSEAKKRRREEDDDKVGCSHSAIEDGAVSEDQCLPLEDDLTFSDTSVALRMMRAQF 66

Query: 49  PQLPQASAEPFMLKSQLYSSVKDRTQVDRELESLRRDKVLRVFKLNTGQDDHAVMFLDDY 108
           P++ Q                            LRR+KV+RVFKLNTGQDDHA++FLDDY
Sbjct: 67  PRIDQC---------------------------LRREKVVRVFKLNTGQDDHAIIFLDDY 99

Query: 109 LKQVDRVVKRMEGKIGGECEVFGWFKTHVLDSKLETGIEHQE 150
           L QVDR+VKRME K   + E+F  FK HVLDSKLE  I H E
Sbjct: 100 LNQVDRIVKRMEEKKQSDLEIFKLFKMHVLDSKLEPSIGHHE 141