Miyakogusa Predicted Gene

Lj5g3v1049250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1049250.1 tr|D7LIS0|D7LIS0_ARALL Lipase class 3 family
protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRA,57.14,1e-17,CGI-141 RELATED,NULL; CGI-141-RELATED/LIPASE
CONTAINING PROTEIN,NULL,99985_g.1
         (84 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42450.1 | Symbols:  | alpha/beta-Hydrolases superfamily prot...    91   1e-19

>AT2G42450.1 | Symbols:  | alpha/beta-Hydrolases superfamily protein
           | chr2:17672425-17674854 REVERSE LENGTH=546
          Length = 546

 Score = 91.3 bits (225), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 4/77 (5%)

Query: 12  EELYIPGTVYYLKRN--SGSQNNVGK--DFFTLLKMQSGEHFPRIILSGNFITDHRCDSH 67
           EELY+PG VYYL R+     +++ GK  ++++L K   G+HF RI+LSGNFITDH+CDSH
Sbjct: 465 EELYVPGAVYYLMRSLRGTPKSSAGKQVEYYSLWKRDPGQHFQRILLSGNFITDHKCDSH 524

Query: 68  NYALRDVLKGLPWYGEE 84
            YALRDVLKG P +  E
Sbjct: 525 YYALRDVLKGFPSFINE 541