Miyakogusa Predicted Gene

Lj5g3v1037130.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1037130.1 Non Chatacterized Hit- tr|I3SGB8|I3SGB8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.85,0,ParA,ATPase-like, ParA/MinD; AAA_31,AAA domain; P-loop
containing nucleoside triphosphate hydrolases,CUFF.54708.1
         (279 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G19540.1 | Symbols: INDL | IND1(iron-sulfur protein required ...   400   e-112
AT3G24430.1 | Symbols: HCF101 | ATP binding | chr3:8868731-88721...   185   4e-47
AT5G50960.1 | Symbols: NBP35, ATNBP35 | nucleotide binding prote...   139   2e-33
AT5G24020.1 | Symbols: MIND, ARC11, ATMIND1 | septum site-determ...    49   4e-06

>AT4G19540.1 | Symbols: INDL | IND1(iron-sulfur protein required for
           NADH dehydrogenase)-like | chr4:10657517-10659094
           FORWARD LENGTH=313
          Length = 313

 Score =  400 bits (1029), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 184/262 (70%), Positives = 225/262 (85%)

Query: 15  HLRIDGVKDTIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPNIPIMMNIN 74
            LR+ GVKD IAVASGKGGVGKS+TAVNLAVALA+KC+LK+GLLDADVYGP++PIMMNIN
Sbjct: 36  ELRLHGVKDIIAVASGKGGVGKSSTAVNLAVALANKCELKIGLLDADVYGPSVPIMMNIN 95

Query: 75  TKPKATLDKKMIPIEKYGIKCMSIGFLVEKDVPIVWRGPMVQKALEQMTRGVDWGNLDIL 134
            KP+   D KMIP+E YG+KCMS+G LVEKD P+VWRGPMV  AL +MT+GVDWG+LDIL
Sbjct: 96  QKPQVNQDMKMIPVENYGVKCMSMGLLVEKDAPLVWRGPMVMSALAKMTKGVDWGDLDIL 155

Query: 135 VMDMPPGTGDVQIAMSQNLQLSGALIVSTPQDVALMDARRGVKMFNKVDVPILGIVENMS 194
           V+DMPPGTGD QI++SQNL+LSGA+IVSTPQDVAL DA RG+ MF+KV VPILG+VENMS
Sbjct: 156 VVDMPPGTGDAQISISQNLKLSGAVIVSTPQDVALADANRGISMFDKVRVPILGLVENMS 215

Query: 195 CFKCPHCGEPSYIFGKEGTRKTATEMGLDFLGEIPLEVEVREACDKGHPIVLAAPDSVVS 254
           CF CPHC EPS+IFGKEG R+TA + GL  +GEIPLE+ +RE  D+G P+V+++P S+VS
Sbjct: 216 CFVCPHCNEPSFIFGKEGARRTAAKKGLKLIGEIPLEMSIREGSDEGVPVVVSSPGSIVS 275

Query: 255 RAYVDVAEKVVQKLKEQQFQPE 276
           +AY D+A+ VV+ LKE +  P+
Sbjct: 276 KAYQDLAQNVVKGLKELRENPD 297


>AT3G24430.1 | Symbols: HCF101 | ATP binding | chr3:8868731-8872154
           REVERSE LENGTH=532
          Length = 532

 Score =  185 bits (469), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/259 (40%), Positives = 157/259 (60%), Gaps = 16/259 (6%)

Query: 21  VKDTIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPNIPIMMNINTK---- 76
           + + IAV+S KGGVGKST AVNLA  LA     +VG+ DADVYGP++P M+N  ++    
Sbjct: 175 ISNIIAVSSCKGGVGKSTVAVNLAYTLAG-MGARVGIFDADVYGPSLPTMVNPESRILEM 233

Query: 77  -PKATLDKKMIPIEKYGIKCMSIGFLVEKDVPIVWRGPMVQKALEQMTRGVDWGNLDILV 135
            P+    K +IP E  G+K +S GF  +     + RGPMV   + Q+    +WG LD LV
Sbjct: 234 NPE---KKTIIPTEYMGVKLVSFGFAGQGRA--IMRGPMVSGVINQLLTTTEWGELDYLV 288

Query: 136 MDMPPGTGDVQIAMSQNLQLSGALIVSTPQDVALMDARRGVKMFNKVDVPILGIVENMSC 195
           +DMPPGTGD+Q+ + Q   L+ A+IV+TPQ +A +D  +GV+MF+K+ VP + +VENM  
Sbjct: 289 IDMPPGTGDIQLTLCQVAPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCVAVVENMCH 348

Query: 196 FKCPHCGEPSYIFGKEGTRKTATEMGLDFLGEIPLEVEVREACDKGHPIVLAAPDSVVSR 255
           F     G+  Y FGK    +   + G+  L ++P+   +  + D G P V++ P S V+R
Sbjct: 349 FDAD--GKRYYPFGKGSGSEVVKQFGIPHLFDLPIRPTLSASGDSGTPEVVSDPLSDVAR 406

Query: 256 AYVDVAEKVVQ---KLKEQ 271
            + D+   VVQ   K+++Q
Sbjct: 407 TFQDLGVCVVQQCAKIRQQ 425


>AT5G50960.1 | Symbols: NBP35, ATNBP35 | nucleotide binding protein
           35 | chr5:20734267-20735824 FORWARD LENGTH=350
          Length = 350

 Score =  139 bits (351), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 141/268 (52%), Gaps = 45/268 (16%)

Query: 17  RIDGVKDTIAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPNIPIMMNINTK 76
           R+  VK  I V SGKGGVGKST +  L+ ALA     +VGL+D D+ GP+IP M+ +  +
Sbjct: 54  RMSTVKHKILVLSGKGGVGKSTFSAQLSFALAGM-DHQVGLMDIDICGPSIPKMLGLEGQ 112

Query: 77  P--KATLDKKMIPIEKYGIKCMSIGFLV-EKDVPIVWRGPMVQKALEQMTRGVDWGNLDI 133
              ++ L    + +E   +  MSIGF++   D  ++WRGP     ++Q  + V WG +D 
Sbjct: 113 EIHQSNLGWSPVYVED-NLGVMSIGFMLPNSDEAVIWRGPRKNGLIKQFLKDVYWGEIDY 171

Query: 134 LVMDMPPGTGDVQIAMSQNL---QLSGALIVSTPQDVALMDARRGVKMFNKVDVPILGIV 190
           LV+D PPGT D  I++ Q L    + GA+IV+TPQ+V+L+D R+ V    KV VP+LG+V
Sbjct: 172 LVVDAPPGTSDEHISIVQYLLPTGIDGAIIVTTPQEVSLIDVRKEVSFCKKVGVPVLGVV 231

Query: 191 ENMSCFK---------------------------CPHCGEP--------SYIFGKE--GT 213
           ENMS                              C     P        S +F     G 
Sbjct: 232 ENMSGLSQPLKDVKFMKLATETGSSINVTEDVIACLRKNAPELLDIVACSEVFDSSGGGA 291

Query: 214 RKTATEMGLDFLGEIPLEVEVREACDKG 241
            +   EMG+ FLG++P++ ++ +A ++G
Sbjct: 292 ERMCREMGVPFLGKVPMDPQLCKAAEQG 319


>AT5G24020.1 | Symbols: MIND, ARC11, ATMIND1 | septum
           site-determining protein (MIND) | chr5:8116731-8117711
           FORWARD LENGTH=326
          Length = 326

 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 58/272 (21%)

Query: 25  IAVASGKGGVGKSTTAVNLAVALASKCQLKVGLLDADVYGPNIPIMMNINTKPKAT---- 80
           + + SGKGGVGK+TT  N+ ++LA +    V  +DAD+   N+ +++ +  +   T    
Sbjct: 61  VVITSGKGGVGKTTTTANVGLSLA-RYGFSVVAIDADLGLRNLDLLLGLENRVNYTCVEV 119

Query: 81  ------LDKKMIPIEKYG---IKCMSIGFLVEKDVPIVWRGPMVQKALEQMTRGVDW--- 128
                 LD+ ++  +++    + C+S        +P+ + G    KALE +   +     
Sbjct: 120 INGDCRLDQALVRDKRWSNFELLCISKP---RSKLPMGFGG----KALEWLVDALKTRPE 172

Query: 129 GNLDILVMDMPPG--TGDVQIAMSQNLQLSGALIVSTPQDVALMDARRGVKMFNKVDVPI 186
           G+ D +++D P G   G +      N     A++V+TP   AL DA R           +
Sbjct: 173 GSPDFIIIDCPAGIDAGFITAITPAN----EAVLVTTPDITALRDADR-----------V 217

Query: 187 LGIVENMSCFKCPHCGEPSYIFGKEGTRKTATE-----------MGLDFLGEIPLEVEVR 235
            G++E      C    +   I  +  T     E           +GL  LG IP + EV 
Sbjct: 218 TGLLE------CDGIRDIKMIVNRVRTDMIKGEDMMSVLDVQEMLGLSLLGVIPEDSEVI 271

Query: 236 EACDKGHPIVLAAPDSVVSRAYVDVAEKVVQK 267
            + ++G P+VL  P ++   A+   A ++V++
Sbjct: 272 RSTNRGFPLVLNKPPTLAGLAFEQAAWRLVEQ 303