Miyakogusa Predicted Gene

Lj5g3v1015870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1015870.1 Non Chatacterized Hit- tr|I3SNQ1|I3SNQ1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.34,0,Ribosomal_S19,Ribosomal protein S19/S15; no
description,Ribosomal protein S19, superfamily; rpsS_arc,CUFF.54710.1
         (151 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G04270.1 | Symbols: RPS15 | cytosolic ribosomal protein S15 |...   268   9e-73
AT5G09500.1 | Symbols:  | Ribosomal protein S19 family protein |...   266   4e-72
AT5G09510.1 | Symbols:  | Ribosomal protein S19 family protein |...   266   5e-72
AT1G04270.2 | Symbols: RPS15 | cytosolic ribosomal protein S15 |...   261   9e-71
AT5G09490.1 | Symbols:  | Ribosomal protein S19 family protein |...   256   3e-69
AT5G43640.1 | Symbols:  | Ribosomal protein S19 family protein |...   242   9e-65
AT5G09510.2 | Symbols:  | Ribosomal protein S19 family protein |...   211   2e-55
AT5G63070.1 | Symbols:  | Ribosomal protein S19 family protein |...   189   5e-49
AT1G33850.1 | Symbols:  | Ribosomal protein S19 family protein |...    80   8e-16

>AT1G04270.1 | Symbols: RPS15 | cytosolic ribosomal protein S15 |
           chr1:1141852-1142960 REVERSE LENGTH=152
          Length = 152

 Score =  268 bits (685), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 142/152 (93%), Positives = 148/152 (97%), Gaps = 1/152 (0%)

Query: 1   MADVETDVAA-GVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKP 59
           MADVE +VAA GVPKKRTFKKF+F+GVDLDALLDMSTD+LVKLFS+R RRRF RGLTRKP
Sbjct: 1   MADVEPEVAAAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKP 60

Query: 60  MALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 119
           MALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 120 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151
           HYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152


>AT5G09500.1 | Symbols:  | Ribosomal protein S19 family protein |
           chr5:2954044-2954850 REVERSE LENGTH=150
          Length = 150

 Score =  266 bits (680), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 133/151 (88%), Positives = 139/151 (92%), Gaps = 1/151 (0%)

Query: 1   MADVETDVAAGVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPM 60
           MAD E   AAG+ KKRTFKKFSFRGVDLDALLDMSTD+LVKLF +R RRRF RGLTRKPM
Sbjct: 1   MADPEV-AAAGIVKKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRFSRGLTRKPM 59

Query: 61  ALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGH 120
           ALIKKLRKAK EAP GEKP  VRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPEMIGH
Sbjct: 60  ALIKKLRKAKIEAPAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGH 119

Query: 121 YLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151
           YLAEFSISYKPVKHGRPG+GAT+SSRFIPLK
Sbjct: 120 YLAEFSISYKPVKHGRPGVGATNSSRFIPLK 150


>AT5G09510.1 | Symbols:  | Ribosomal protein S19 family protein |
           chr5:2955698-2956554 REVERSE LENGTH=152
          Length = 152

 Score =  266 bits (679), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 141/152 (92%), Positives = 147/152 (96%), Gaps = 1/152 (0%)

Query: 1   MADVETDVAA-GVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKP 59
           MADVE +VAA GVPKKRTFKKF+F+GVDLDALLDMSTD+LVKLFS+R RRRF RGLTRKP
Sbjct: 1   MADVEPEVAAAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKP 60

Query: 60  MALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 119
           MALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG
Sbjct: 61  MALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 120

Query: 120 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151
           HYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 121 HYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 152


>AT1G04270.2 | Symbols: RPS15 | cytosolic ribosomal protein S15 |
           chr1:1141852-1142960 REVERSE LENGTH=151
          Length = 151

 Score =  261 bits (668), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 141/152 (92%), Positives = 147/152 (96%), Gaps = 2/152 (1%)

Query: 1   MADVETDVAA-GVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKP 59
           MADVE +VAA GVPKKRTFKKF+F+GVDLDALLDMSTD+LVKLFS+R RRRF RGLTRKP
Sbjct: 1   MADVEPEVAAAGVPKKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKP 60

Query: 60  MALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 119
           MALIKKLRK KREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG
Sbjct: 61  MALIKKLRK-KREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 119

Query: 120 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151
           HYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 120 HYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 151


>AT5G09490.1 | Symbols:  | Ribosomal protein S19 family protein |
           chr5:2952378-2953183 REVERSE LENGTH=152
          Length = 152

 Score =  256 bits (655), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 126/152 (82%), Positives = 139/152 (91%), Gaps = 1/152 (0%)

Query: 1   MADVETDV-AAGVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKP 59
           MA+VE DV AA + KKRTFKKFSF+GVDLDALLDM TD+LV+LF +R RRR  RGLTRKP
Sbjct: 1   MAEVEPDVSAAALAKKRTFKKFSFKGVDLDALLDMPTDDLVELFPSRIRRRMSRGLTRKP 60

Query: 60  MALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 119
           MALIKKLRKAK +AP GEKPE VRTHLRNM+I+PEMIGSIIGVYNGKTFNQ+EIKPEMIG
Sbjct: 61  MALIKKLRKAKLDAPAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIKPEMIG 120

Query: 120 HYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151
           HYLAEFSI+YKPV+HG+PG GATHSSRFIPLK
Sbjct: 121 HYLAEFSITYKPVRHGKPGHGATHSSRFIPLK 152


>AT5G43640.1 | Symbols:  | Ribosomal protein S19 family protein |
           chr5:17531302-17532370 FORWARD LENGTH=149
          Length = 149

 Score =  242 bits (617), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 129/144 (89%), Positives = 135/144 (93%)

Query: 8   VAAGVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPMALIKKLR 67
           VAAG+ KKRTFKKFSFRGVDLDALLDMS ++LVK FS+R RRRF RGLTRKPMALIKKLR
Sbjct: 6   VAAGIVKKRTFKKFSFRGVDLDALLDMSIEDLVKHFSSRIRRRFSRGLTRKPMALIKKLR 65

Query: 68  KAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSI 127
           KAK EAP GEKP  VRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSI
Sbjct: 66  KAKMEAPAGEKPASVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSI 125

Query: 128 SYKPVKHGRPGIGATHSSRFIPLK 151
           SYKPVKHGRPG+GAT+SSRFIPLK
Sbjct: 126 SYKPVKHGRPGVGATNSSRFIPLK 149


>AT5G09510.2 | Symbols:  | Ribosomal protein S19 family protein |
           chr5:2955698-2956353 REVERSE LENGTH=118
          Length = 118

 Score =  211 bits (537), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 112/118 (94%), Positives = 115/118 (97%)

Query: 34  MSTDELVKLFSARARRRFQRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVP 93
           MSTD+LVKLFS+R RRRF RGLTRKPMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVP
Sbjct: 1   MSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVP 60

Query: 94  EMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151
           EMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPG+GATHSSRFIPLK
Sbjct: 61  EMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGVGATHSSRFIPLK 118


>AT5G63070.1 | Symbols:  | Ribosomal protein S19 family protein |
           chr5:25299178-25299660 REVERSE LENGTH=160
          Length = 160

 Score =  189 bits (481), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 99/160 (61%), Positives = 119/160 (74%), Gaps = 9/160 (5%)

Query: 1   MADVETDVAAGVP---KKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTR 57
           MA  E + A  V    KKRTFKKFSFRG ++DALL MS  +L KLF+AR RRRF RGL +
Sbjct: 1   MAINEPEFATAVAVATKKRTFKKFSFRGFNVDALLKMSNVDLAKLFNARVRRRFYRGLKK 60

Query: 58  KPMALIKKLRKAKREAPQGEK--PEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKP 115
           +P+ LIKKLR+AK+EA    K  PE V+THLRNMIIVPEMIGS++GV+NGK FN++ IKP
Sbjct: 61  QPLILIKKLRRAKKEASDENKMKPEVVKTHLRNMIIVPEMIGSVVGVHNGKKFNEIVIKP 120

Query: 116 EMIGHYLAEFSISYKPVKHGRPGIGAT----HSSRFIPLK 151
           EMIGHYLAEFS++ K V H RP I        S+RFIPL+
Sbjct: 121 EMIGHYLAEFSMTCKKVNHHRPRICGCCCFRRSTRFIPLR 160


>AT1G33850.1 | Symbols:  | Ribosomal protein S19 family protein |
          chr1:12287913-12288210 REVERSE LENGTH=70
          Length = 70

 Score = 79.7 bits (195), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/62 (83%), Positives = 56/62 (90%)

Query: 8  VAAGVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPMALIKKLR 67
          VAAG+ KKR FKKFSFRGVDLDALLDMST++LVK FS+R RRRF RG TRKPMALIKKLR
Sbjct: 6  VAAGIVKKRIFKKFSFRGVDLDALLDMSTEDLVKHFSSRIRRRFSRGFTRKPMALIKKLR 65

Query: 68 KA 69
          KA
Sbjct: 66 KA 67