Miyakogusa Predicted Gene

Lj5g3v1000960.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1000960.2 tr|G7IDM5|G7IDM5_MEDTR Vicilin-like antimicrobial
peptides 2-2 OS=Medicago truncatula GN=MTR_1g07171,67.94,0,no
description,RmlC-like jelly roll fold; RmlC-like cupins,RmlC-like
cupin domain; Cupin,Cupin 1; se,CUFF.54490.2
         (223 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G22640.1 | Symbols: PAP85 | cupin family protein | chr3:80119...    92   2e-19
AT2G18540.1 | Symbols:  | RmlC-like cupins superfamily protein |...    64   6e-11
AT4G36700.1 | Symbols:  | RmlC-like cupins superfamily protein |...    63   2e-10
AT2G28490.1 | Symbols:  | RmlC-like cupins superfamily protein |...    50   2e-06

>AT3G22640.1 | Symbols: PAP85 | cupin family protein |
           chr3:8011902-8013883 REVERSE LENGTH=486
          Length = 486

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 19/199 (9%)

Query: 16  RTIWPFGGQSMAPFNLFSKRPIFSNEYGRLFEVGQNPSEDKSGLQGLNLMVTFANITNGC 75
           RT+W        PFNLF+  PI+SN++G   E      ++ + LQ L++   +AN+T G 
Sbjct: 272 RTLW-------TPFNLFAIDPIYSNDFGHFHEAH---PKNYNQLQDLHIAAAWANMTQGS 321

Query: 76  MSTLFYNTHSTPIAMVVEGEGHFEMACPH--------LXXXXXXXXXXXXXXYQKISARL 127
           +    +N+ +T +  V  G   FEMA P+                         K+ +R+
Sbjct: 322 LFLPHFNSKTTFVTFVENGCARFEMATPYKFQRGQQQWPGQGQEEEEDMSENVHKVVSRV 381

Query: 128 RPGTVFVVPAGHPFVTIASNKSNLMILRFEVNAKNNKKLTFAGKGNIVSALDKTAKELSF 187
             G VF+VPAGHPF TI S   + + + F + A N+K+   AG+ N++S L+  A  ++F
Sbjct: 382 CKGEVFIVPAGHPF-TILSQDQDFIAVGFGIYATNSKRTFLAGEENLLSNLNPAATRVTF 440

Query: 188 DYPADKVDKIFERDEEFFF 206
              +   +K+F      +F
Sbjct: 441 GVGSKVAEKLFTSQNYSYF 459


>AT2G18540.1 | Symbols:  | RmlC-like cupins superfamily protein |
           chr2:8042382-8045008 REVERSE LENGTH=707
          Length = 707

 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 10/175 (5%)

Query: 29  FNLFSKRPIFSNEYGRLFEVGQNPSEDKSGLQGLNLMVTFANITNGCMSTLFYNTHSTPI 88
           FN+F + P F N  GR   V +   +D   L+G    V   N+T G M    +N  +  I
Sbjct: 247 FNVFEEDPDFENNNGRSIVVDE---KDLDALKGSRFGVFMVNLTKGSMIGPHWNPSACEI 303

Query: 89  AMVVEGEGHFEMACPHLXXXXXXXXXXXXXXYQKISARLRPGTVFVVPAGHPFVTIASNK 148
           ++V+EGEG   +                    +  S  +  G VFVVP  HP   ++   
Sbjct: 304 SIVLEGEGMVRVV-------NQQSLSSCKNDRKSESFMVEEGDVFVVPKFHPMAQMSFEN 356

Query: 149 SNLMILRFEVNAKNNKKLTFAGKGNIVSALDKTAKELSFDYPADKVDKIFERDEE 203
           S+ + + F  +AK N      G+ +++  LD+    +SF+   + +  + +  +E
Sbjct: 357 SSFVFMGFSTSAKTNHPQFLVGQSSVLKVLDRDVVAVSFNLSNETIKGLLKAQKE 411


>AT4G36700.1 | Symbols:  | RmlC-like cupins superfamily protein |
           chr4:17298443-17300337 REVERSE LENGTH=522
          Length = 522

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 78/175 (44%), Gaps = 10/175 (5%)

Query: 29  FNLFSKRPIFSNEYGRLFEVGQNPSEDKSGLQGLNLMVTFANITNGCMSTLFYNTHSTPI 88
           FN+F   P F + YGR   + +   +D   L+G  + V+  N+T G M    +N  +  I
Sbjct: 265 FNVFESEPDFESPYGRTITINR---KDLKVLKGSMVGVSMVNLTQGSMMGPHWNPWACEI 321

Query: 89  AMVVEGEGHFEMACPHLXXXXXXXXXXXXXXYQKISARLRPGTVFVVPAGHPFVTIASNK 148
           ++V++G G   +                    + +  ++  G +F VP  HP   ++ N 
Sbjct: 322 SIVLKGAGMVRV-------LRSSISSNTSSECKNVRFKVEEGDIFAVPRLHPMAQMSFNN 374

Query: 149 SNLMILRFEVNAKNNKKLTFAGKGNIVSALDKTAKELSFDYPADKVDKIFERDEE 203
            +L+ + F  +AKNN+    AG+ + +  LD+     S +  +  +D +    +E
Sbjct: 375 DSLVFVGFTTSAKNNEPQFLAGEDSALRMLDRQVLAASLNVSSVTIDGLLGAQKE 429


>AT2G28490.1 | Symbols:  | RmlC-like cupins superfamily protein |
           chr2:12178812-12180983 REVERSE LENGTH=511
          Length = 511

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 20/186 (10%)

Query: 29  FNLFSKR--PIFSNEYGRLFEVGQNPSEDKSGLQGLNLMVTFANITNGCMSTLFYNTHST 86
           +N++ K+  P F N+YG    +  +   D   L+   + V   N+T G M     N  +T
Sbjct: 329 YNIYDKKDKPSFDNKYGWSIALDYD---DYKPLKHSGIGVYLVNLTAGAMMAPHMNPTAT 385

Query: 87  PIAMVVEGEGHFEMACPHLXXXXXXXXXXXXXXYQKISARLRPGTVFVVPAGHPFVTIAS 146
              +V+ G G  ++  P+                  ++ R+  G VF +P    F  IAS
Sbjct: 386 EYGIVLAGSGEIQVVFPN--------------GTSAMNTRVSVGDVFWIPRYFAFCQIAS 431

Query: 147 NKSNLMILRFEVNAKNNKKLTFAGKGNIVSALDKTAKELSFDYPADKVDKIFE-RDEEFF 205
                  + F  +A  N+     G  +++  L+ T+  ++F    + + +  E + E   
Sbjct: 432 RTGPFEFVGFTTSAHKNRPQFLVGSNSLLRTLNLTSLSIAFGVDEETMRRFIEAQREAVI 491

Query: 206 FPGPEA 211
            P P A
Sbjct: 492 LPTPAA 497