Miyakogusa Predicted Gene
- Lj5g3v1000950.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1000950.1 Non Chatacterized Hit- tr|K4CUH3|K4CUH3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,41.61,2e-17,seg,NULL; coiled-coil,NULL; RmlC-like
cupins,RmlC-like cupin domain; no description,RmlC-like jelly
,CUFF.54488.1
(197 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G22640.1 | Symbols: PAP85 | cupin family protein | chr3:80119... 52 3e-07
>AT3G22640.1 | Symbols: PAP85 | cupin family protein |
chr3:8011902-8013883 REVERSE LENGTH=486
Length = 486
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 137 PFVFEDKDFDTRFDTEDGKIWVLQKFSKKS-KLLRGIENFRLSILEARGHTFISPRHFDS 195
P+ F + F F +++G + VL KF+K + L RGIEN+R S++E TF P H D+
Sbjct: 63 PYHFRKRSFSDWFQSKEGFVRVLPKFTKHAPALFRGIENYRFSLVEMEPTTFFVPHHLDA 122
Query: 196 EA 197
+A
Sbjct: 123 DA 124