Miyakogusa Predicted Gene

Lj5g3v1000950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1000950.1 Non Chatacterized Hit- tr|K4CUH3|K4CUH3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,41.61,2e-17,seg,NULL; coiled-coil,NULL; RmlC-like
cupins,RmlC-like cupin domain; no description,RmlC-like jelly
,CUFF.54488.1
         (197 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G22640.1 | Symbols: PAP85 | cupin family protein | chr3:80119...    52   3e-07

>AT3G22640.1 | Symbols: PAP85 | cupin family protein |
           chr3:8011902-8013883 REVERSE LENGTH=486
          Length = 486

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%)

Query: 137 PFVFEDKDFDTRFDTEDGKIWVLQKFSKKS-KLLRGIENFRLSILEARGHTFISPRHFDS 195
           P+ F  + F   F +++G + VL KF+K +  L RGIEN+R S++E    TF  P H D+
Sbjct: 63  PYHFRKRSFSDWFQSKEGFVRVLPKFTKHAPALFRGIENYRFSLVEMEPTTFFVPHHLDA 122

Query: 196 EA 197
           +A
Sbjct: 123 DA 124