Miyakogusa Predicted Gene

Lj5g3v0998800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0998800.1 tr|F8QPI4|F8QPI4_9FABA Selenocysteine
methyltransferase OS=Astragalus chrysochlorus GN=SMTA PE=2
SV=,83.87,0,HCY,Homocysteine S-methyltransferase; Homocysteine
S-methyltransferase,Homocysteine
S-methyltransfer,NODE_24044_length_1659_cov_48.504520.path2.1
         (341 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G63250.1 | Symbols: HMT-2, ATHMT-2, HMT2 | homocysteine methy...   464   e-131
AT3G22740.1 | Symbols: HMT3 | homocysteine S-methyltransferase 3...   425   e-119
AT3G63250.2 | Symbols: HMT-2, ATHMT-2, HMT2 | homocysteine methy...   388   e-108
AT3G25900.1 | Symbols: HMT-1, ATHMT-1 | Homocysteine S-methyltra...   341   4e-94
AT3G25900.3 | Symbols: HMT-1 | Homocysteine S-methyltransferase ...   308   5e-84
AT3G25900.2 | Symbols: HMT-1, ATHMT-1 | Homocysteine S-methyltra...   276   2e-74

>AT3G63250.1 | Symbols: HMT-2, ATHMT-2, HMT2 | homocysteine
           methyltransferase 2 | chr3:23370575-23372587 REVERSE
           LENGTH=333
          Length = 333

 Score =  464 bits (1193), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 223/330 (67%), Positives = 256/330 (77%), Gaps = 6/330 (1%)

Query: 6   LADFLRQGGGRAIIDGGLATELEHHGADLNDPLWSAKCLLSSPHLIRQVHVDYLENGADI 65
           + DFL+Q GG A+IDGGLATE E HGADLNDPLWSAKCL++SPHLI  VH+DYLE GADI
Sbjct: 9   MKDFLKQTGGYAVIDGGLATEFERHGADLNDPLWSAKCLVTSPHLIHTVHLDYLEAGADI 68

Query: 66  IITASYQATIQGFKAKGFSDEEGEALLRKSVEIAREARDVYYERCXXXXXXXXXXXXXXR 125
           I +ASYQATIQGF+AKGFS EE E+LL+KSVEIA EAR+ YY++C              +
Sbjct: 69  ISSASYQATIQGFEAKGFSREESESLLKKSVEIATEARNSYYDKCGTSSSMDD------K 122

Query: 126 ILKQRPILVAASVGSYGAYLADGSEYSGNYGDAVKLETLKDFHRRRVQVLADAGADLLAF 185
           ILK+RPILVAASVGSYGAYLADGSEYSG YGD++ LE LKDFHRRR+QVLA++GADL+AF
Sbjct: 123 ILKKRPILVAASVGSYGAYLADGSEYSGIYGDSITLEKLKDFHRRRLQVLAESGADLIAF 182

Query: 186 ETIPNKXXXXXXXXXXXXXDIKIPAWFCFNSKDGINVVSGDSVVECSSIAESCNKVVAVG 245
           ETIPNK             D+KIP WF FNSKDG+NVVSGDS+ EC SIAE+C KVVAVG
Sbjct: 183 ETIPNKIEAQAFADLLEEGDVKIPGWFSFNSKDGVNVVSGDSIKECISIAENCEKVVAVG 242

Query: 246 INCTPPRFIHGLXXXXXXXXXXXXXXYPNSGETYDGEIKEWVQNTGVTDEDFVSYVDKWC 305
           INCTPPRFI GL              YPNSGE+YD + KEWV+NTGV DEDFVSYV+KW 
Sbjct: 243 INCTPPRFIEGLVLEIEKVTSKPILVYPNSGESYDADRKEWVENTGVGDEDFVSYVEKWM 302

Query: 306 ELGASLIGGCCRTTPATIRGIYKTLANSQS 335
           + G SL+GGCCRTTP TIR I+K L N +S
Sbjct: 303 DAGVSLLGGCCRTTPTTIRAIHKRLVNRRS 332


>AT3G22740.1 | Symbols: HMT3 | homocysteine S-methyltransferase 3 |
           chr3:8033200-8035710 REVERSE LENGTH=347
          Length = 347

 Score =  425 bits (1093), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 207/335 (61%), Positives = 245/335 (73%), Gaps = 4/335 (1%)

Query: 2   SSSLLADFLRQGGGRAIIDGGLATELEHHGADLNDPLWSAKCLLSSPHLIRQVHVDYLEN 61
           +SSL+ DFL + GG A++DGG ATEL+ HGAD+NDPLWSAKCL++SPHL+ +VH+DYLE+
Sbjct: 9   TSSLMTDFLEKCGGYAVVDGGFATELQRHGADINDPLWSAKCLITSPHLVTKVHLDYLES 68

Query: 62  GADIIITASYQATIQGFKAKGFSDEEGEALLRKSVEIAREARDVYYERCXXXXXXXXXXX 121
           GA+IIITASYQATIQGF AKG S  E E LLR+SVEI  EAR+++Y RC           
Sbjct: 69  GANIIITASYQATIQGFVAKGLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAYAG 128

Query: 122 XXXRILKQRPILVAASVGSYGAYLADGSEYSGNYGDAVKLETLKDFHRRRVQVLADAGAD 181
              R    RPILVAASVGSYGAYLADGSEYSG YGD+V  ETLKDFHRRRVQ+LA +GAD
Sbjct: 129 KASR----RPILVAASVGSYGAYLADGSEYSGIYGDSVSKETLKDFHRRRVQILAKSGAD 184

Query: 182 LLAFETIPNKXXXXXXXXXXXXXDIKIPAWFCFNSKDGINVVSGDSVVECSSIAESCNKV 241
           L+AFETIPNK             DI IPAWF F SKDG++V  GDSVVEC+ +A+SC  V
Sbjct: 185 LIAFETIPNKLEAEAYADLLEEEDIDIPAWFSFTSKDGVSVPRGDSVVECAKVADSCKNV 244

Query: 242 VAVGINCTPPRFIHGLXXXXXXXXXXXXXXYPNSGETYDGEIKEWVQNTGVTDEDFVSYV 301
           VA+GINCT PR+IH L              YPNSGE YDG  K+W+++ G ++EDFVSYV
Sbjct: 245 VAIGINCTAPRYIHALIISLRQMTRKPIVVYPNSGEVYDGLNKKWIKSEGESEEDFVSYV 304

Query: 302 DKWCELGASLIGGCCRTTPATIRGIYKTLANSQSA 336
            KW + GASL GGCCRTTP TIR I K L++  SA
Sbjct: 305 SKWRDAGASLFGGCCRTTPNTIRAIAKVLSDEPSA 339


>AT3G63250.2 | Symbols: HMT-2, ATHMT-2, HMT2 | homocysteine
           methyltransferase 2 | chr3:23370575-23371974 REVERSE
           LENGTH=293
          Length = 293

 Score =  388 bits (996), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 189/286 (66%), Positives = 218/286 (76%), Gaps = 6/286 (2%)

Query: 50  LIRQVHVDYLENGADIIITASYQATIQGFKAKGFSDEEGEALLRKSVEIAREARDVYYER 109
           L+ QVH+DYLE GADII +ASYQATIQGF+AKGFS EE E+LL+KSVEIA EAR+ YY++
Sbjct: 13  LMEQVHLDYLEAGADIISSASYQATIQGFEAKGFSREESESLLKKSVEIATEARNSYYDK 72

Query: 110 CXXXXXXXXXXXXXXRILKQRPILVAASVGSYGAYLADGSEYSGNYGDAVKLETLKDFHR 169
           C              +ILK+RPILVAASVGSYGAYLADGSEYSG YGD++ LE LKDFHR
Sbjct: 73  CGTSSSMDD------KILKKRPILVAASVGSYGAYLADGSEYSGIYGDSITLEKLKDFHR 126

Query: 170 RRVQVLADAGADLLAFETIPNKXXXXXXXXXXXXXDIKIPAWFCFNSKDGINVVSGDSVV 229
           RR+QVLA++GADL+AFETIPNK             D+KIP WF FNSKDG+NVVSGDS+ 
Sbjct: 127 RRLQVLAESGADLIAFETIPNKIEAQAFADLLEEGDVKIPGWFSFNSKDGVNVVSGDSIK 186

Query: 230 ECSSIAESCNKVVAVGINCTPPRFIHGLXXXXXXXXXXXXXXYPNSGETYDGEIKEWVQN 289
           EC SIAE+C KVVAVGINCTPPRFI GL              YPNSGE+YD + KEWV+N
Sbjct: 187 ECISIAENCEKVVAVGINCTPPRFIEGLVLEIEKVTSKPILVYPNSGESYDADRKEWVEN 246

Query: 290 TGVTDEDFVSYVDKWCELGASLIGGCCRTTPATIRGIYKTLANSQS 335
           TGV DEDFVSYV+KW + G SL+GGCCRTTP TIR I+K L N +S
Sbjct: 247 TGVGDEDFVSYVEKWMDAGVSLLGGCCRTTPTTIRAIHKRLVNRRS 292


>AT3G25900.1 | Symbols: HMT-1, ATHMT-1 | Homocysteine
           S-methyltransferase family protein |
           chr3:9480964-9482684 FORWARD LENGTH=326
          Length = 326

 Score =  341 bits (874), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 168/328 (51%), Positives = 215/328 (65%), Gaps = 11/328 (3%)

Query: 3   SSLLADFLRQGGGRAIIDGGLATELEHHGADLNDPLWSAKCLLSSPHLIRQVHVDYLENG 62
           S+LL D +++ GG A++DGG AT+LE HGA +NDPLWSA  L+ +P LI++VH++YLE G
Sbjct: 7   SALLEDLIKKCGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAG 66

Query: 63  ADIIITASYQATIQGFKAKGFSDEEGEALLRKSVEIAREARDVYYERCXXXXXXXXXXXX 122
           ADI++T+SYQATI GF ++G S EE E+LL+KSVE+A EARD ++E+             
Sbjct: 67  ADIVVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYNRA- 125

Query: 123 XXRILKQRPILVAASVGSYGAYLADGSEYSGNYGDAVKLETLKDFHRRRVQVLADAGADL 182
                     LVAAS+GSYGAYLADGSEYSG+YG+ V L+ LKDFHRRR+QVL +AG DL
Sbjct: 126 ----------LVAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDL 175

Query: 183 LAFETIPNKXXXXXXXXXXXXXDIKIPAWFCFNSKDGINVVSGDSVVECSSIAESCNKVV 242
           LAFETIPNK              ++IPAW CF S DG    SG+S  EC       N + 
Sbjct: 176 LAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIY 235

Query: 243 AVGINCTPPRFIHGLXXXXXXXXXXXXXXYPNSGETYDGEIKEWVQNTGVTDEDFVSYVD 302
           AVGINC PP+FI  L              YPNSGE +DG+ K+W+ +    D++F  +  
Sbjct: 236 AVGINCAPPQFIENLIRKFAKLTKKAIVVYPNSGEVWDGKAKQWLPSQCFGDDEFEMFAT 295

Query: 303 KWCELGASLIGGCCRTTPATIRGIYKTL 330
           KW +LGA LIGGCCRTTP+TI  I + L
Sbjct: 296 KWRDLGAKLIGGCCRTTPSTINAISRDL 323


>AT3G25900.3 | Symbols: HMT-1 | Homocysteine S-methyltransferase
           family protein | chr3:9480964-9482684 FORWARD LENGTH=306
          Length = 306

 Score =  308 bits (788), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 158/328 (48%), Positives = 205/328 (62%), Gaps = 31/328 (9%)

Query: 3   SSLLADFLRQGGGRAIIDGGLATELEHHGADLNDPLWSAKCLLSSPHLIRQVHVDYLENG 62
           S+LL D +++ GG A++DGG AT+LE HGA +NDPLWSA  L+ +P LI++VH++YLE G
Sbjct: 7   SALLEDLIKKCGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAG 66

Query: 63  ADIIITASYQATIQGFKAKGFSDEEGEALLRKSVEIAREARDVYYERCXXXXXXXXXXXX 122
           ADI++T+SYQATI GF ++G S EE E+LL+KSVE+A EARD ++E+             
Sbjct: 67  ADIVVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYNRA- 125

Query: 123 XXRILKQRPILVAASVGSYGAYLADGSEYSGNYGDAVKLETLKDFHRRRVQVLADAGADL 182
                     LVAAS+GSYGAYLADGSEYSG+YG+ V L+ LKDFHRRR+QVL +AG DL
Sbjct: 126 ----------LVAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDL 175

Query: 183 LAFETIPNKXXXXXXXXXXXXXDIKIPAWFCFNSKDGINVVSGDSVVECSSIAESCNKVV 242
           LAFETIPNK              ++IPAW CF S DG    SG+S  EC       N + 
Sbjct: 176 LAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIY 235

Query: 243 AVGINCTPPRFIHGLXXXXXXXXXXXXXXYPNSGETYDGEIKEWVQNTGVTDEDFVSYVD 302
           A+                           YPNSGE +DG+ K+W+ +    D++F  +  
Sbjct: 236 AL--------------------TKKAIVVYPNSGEVWDGKAKQWLPSQCFGDDEFEMFAT 275

Query: 303 KWCELGASLIGGCCRTTPATIRGIYKTL 330
           KW +LGA LIGGCCRTTP+TI  I + L
Sbjct: 276 KWRDLGAKLIGGCCRTTPSTINAISRDL 303


>AT3G25900.2 | Symbols: HMT-1, ATHMT-1 | Homocysteine
           S-methyltransferase family protein |
           chr3:9480964-9482416 FORWARD LENGTH=268
          Length = 268

 Score =  276 bits (705), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 137/255 (53%), Positives = 173/255 (67%), Gaps = 11/255 (4%)

Query: 3   SSLLADFLRQGGGRAIIDGGLATELEHHGADLNDPLWSAKCLLSSPHLIRQVHVDYLENG 62
           S+LL D +++ GG A++DGG AT+LE HGA +NDPLWSA  L+ +P LI++VH++YLE G
Sbjct: 7   SALLEDLIKKCGGCAVVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAG 66

Query: 63  ADIIITASYQATIQGFKAKGFSDEEGEALLRKSVEIAREARDVYYERCXXXXXXXXXXXX 122
           ADI++T+SYQATI GF ++G S EE E+LL+KSVE+A EARD ++E+             
Sbjct: 67  ADIVVTSSYQATIPGFLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYNRA- 125

Query: 123 XXRILKQRPILVAASVGSYGAYLADGSEYSGNYGDAVKLETLKDFHRRRVQVLADAGADL 182
                     LVAAS+GSYGAYLADGSEYSG+YG+ V L+ LKDFHRRR+QVL +AG DL
Sbjct: 126 ----------LVAASIGSYGAYLADGSEYSGHYGENVSLDKLKDFHRRRLQVLVEAGPDL 175

Query: 183 LAFETIPNKXXXXXXXXXXXXXDIKIPAWFCFNSKDGINVVSGDSVVECSSIAESCNKVV 242
           LAFETIPNK              ++IPAW CF S DG    SG+S  EC       N + 
Sbjct: 176 LAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEPLNKSNNIY 235

Query: 243 AVGINCTPPRFIHGL 257
           AVGINC PP+FI  L
Sbjct: 236 AVGINCAPPQFIENL 250