Miyakogusa Predicted Gene
- Lj5g3v0998790.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0998790.1 Non Chatacterized Hit- tr|I1N3M4|I1N3M4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,84.18,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PPR:
pentatricopeptide repeat
domain,Pentatricopept,NODE_76802_length_2613_cov_10.352468.path2.1
(776 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 984 0.0
AT4G17616.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 6e-56
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 5e-49
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 149 9e-36
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 74 4e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-12
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 69 1e-11
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 3e-11
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 3e-11
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 3e-11
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 3e-11
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 6e-11
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 1e-10
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 66 1e-10
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 66 1e-10
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 64 3e-10
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 1e-09
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 62 2e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 60 5e-09
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 8e-09
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 8e-09
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 59 9e-09
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 59 2e-08
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 59 2e-08
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 59 2e-08
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 58 2e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 5e-08
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 56 9e-08
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 55 2e-07
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 54 3e-07
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 5e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-07
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 3e-06
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 4e-06
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 5e-06
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-06
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 9e-06
>AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:744026-746407 REVERSE
LENGTH=793
Length = 793
Score = 984 bits (2545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/720 (67%), Positives = 572/720 (79%), Gaps = 12/720 (1%)
Query: 62 FSSMAERILVQAQDPAKVSLEIENAIDENQLDYSWKLFEQHMHMDGFPRKSVFNKLVTSY 121
SS++ IL+QA+DPAK++ EI+ A+DE++ D +W+LFEQHM M+GFPRKSV N +V +
Sbjct: 81 ISSISGSILLQARDPAKLNEEIQIAVDEHRCDEAWRLFEQHMQMEGFPRKSVVNNVVVCF 140
Query: 122 VESLDTQWLRKAYELEERAIEEGKHDLLEKEVLIYLSLGLAKAGLPVLASTILRKMIGMG 181
ESLD+ WL+K Y L E+A EEGK +LLEKE L+YLSL LAK+G+ V ASTILRK++
Sbjct: 141 AESLDSNWLQKGYSLVEQAYEEGKQNLLEKEPLLYLSLALAKSGMAVPASTILRKLVETE 200
Query: 182 HFPRVTAWSAVLANMSQTADGSYLAAELILEIGYMFQNNRVDPRKKSNAPLIAMKPNTAA 241
+P V+AWSAVLA+MS GSYL+AEL+LEIGY+F NNRVDPRKKSNAPL+AMKPNT
Sbjct: 201 EYPHVSAWSAVLAHMSLAGSGSYLSAELVLEIGYLFHNNRVDPRKKSNAPLLAMKPNTQV 260
Query: 242 FNIALAGCLLFDTSRKAEQLLDMMPRIGVKADSNLLVTMARIYERNGRREELKKLQRHIE 301
N+ALAGCLLF T+RKAEQLLDM+P+IGVKAD+NLLV MA IYERNGRREEL+KLQRHI+
Sbjct: 261 LNVALAGCLLFGTTRKAEQLLDMIPKIGVKADANLLVIMAHIYERNGRREELRKLQRHID 320
Query: 302 DAPNLTDIQFRQFYNCLLTCHLKFGDLDSASNMVLEMLGKAKQARNSLAAAKFINGAAKL 361
+A NL + QF QFYNCLL CHLKFGDL+SAS MVLEML + K ARNSL AA A
Sbjct: 321 EACNLNESQFWQFYNCLLMCHLKFGDLESASKMVLEMLRRGKVARNSLGAAILEFDTAD- 379
Query: 362 DHNYFPGPASVHSLSNSEVMGSLENNQPIRSAFS-----SYEEFLKDRNFLQLEAESNAV 416
D + S SEV E++ P S Y+EF +DR FL+LEAE+ V
Sbjct: 380 DGRLYTKRVSG---KGSEVK---EHDNPETRVVSIHSMIPYDEFSRDRKFLKLEAEAKDV 433
Query: 417 LGSLLAKLQKHVDLITTKHGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFS 476
LG+LLAKL V+LIT++ G+LQPTE IYVKL KAFLE+ K K+LA FLLKAE EDSP S
Sbjct: 434 LGALLAKLHVQVELITSERGVLQPTEEIYVKLAKAFLESGKMKELAKFLLKAEHEDSPVS 493
Query: 477 NDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASL 536
+DNS L++VIN+CISLG LDQAHDLLDEMR+AGVRTGSSVY+SLLKAYC N+ +V SL
Sbjct: 494 SDNSMLINVINACISLGMLDQAHDLLDEMRMAGVRTGSSVYSSLLKAYCNTNQTREVTSL 553
Query: 537 LRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGA 596
LRDA+KAGIQLDSS YEA+IQS+V+Q DT GAL +F+EMKEAKI + Q L K
Sbjct: 554 LRDAQKAGIQLDSSCYEALIQSQVIQNDTHGALNVFKEMKEAKILRGGNQKFEKLLKGCE 613
Query: 597 ETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNA 656
EA LM+KLL EI+E QS+D GVHDWNNVIHFF KK LMQDAEKALK+MRSLGHSPNA
Sbjct: 614 GNAEAGLMSKLLREIREVQSLDAGVHDWNNVIHFFSKKGLMQDAEKALKRMRSLGHSPNA 673
Query: 657 QTFHSMVTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRA 716
QTFHSMVTGYAAIG KY EVTELWGEMKS+A MKFDQELLD+VLYTFVRGGFF+RA
Sbjct: 674 QTFHSMVTGYAAIGSKYTEVTELWGEMKSIAAATSSMKFDQELLDAVLYTFVRGGFFSRA 733
Query: 717 NEVVSMMEKGKMFIDKYKYRMLFLKYHKTLYKGKAPKFQTESQLNKREAAIAFKRWIGLT 776
NEVV MMEK MF+DKYKYRMLFLKYHKT YKGKAPK Q+ESQL KREA + FK+W+GL+
Sbjct: 734 NEVVEMMEKKNMFVDKYKYRMLFLKYHKTAYKGKAPKVQSESQLKKREAGLVFKKWLGLS 793
>AT4G17616.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:9819608-9821632 FORWARD
LENGTH=674
Length = 674
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 189/701 (26%), Positives = 343/701 (48%), Gaps = 92/701 (13%)
Query: 82 EIENAIDENQLDYSWKLFEQHMHMDGFPRKSVFNKLVTSYVESLDTQWLRKAYELEERAI 141
++E A+ ++++D +W +F+ + GFP + N+ VT S D WL KA +L A+
Sbjct: 60 KLETALKDHRVDDAWDVFKDFKRLYGFPESVIMNRFVTVLSYSSDAGWLCKASDLTRLAL 119
Query: 142 EEGKHDLLEKEVLIYLSLGLAKAGLPVLASTILRKMIGMGHFPRVTAWSAVLANMSQTAD 201
++ +L +VL LSL LA+A + A +ILR M+ G+ V+ +M +T
Sbjct: 120 KQNP-GMLSGDVLTKLSLSLARAQMVESACSILRIMLEKGYVLTSDVLRLVVMHMVKTEI 178
Query: 202 GSYLAAELILEIGYMFQNNRVDPRKKSNAPLIAMKPNTAAFNIALAGCLLFDTSRKAEQL 261
G+ LA+ ++++ F V K++++P +KP+T FN+ L C+ F S K ++L
Sbjct: 179 GTCLASNYLVQVCDRFVEFNVG--KRNSSPGNVVKPDTVLFNLVLGSCVRFGFSLKGQEL 236
Query: 262 LDMMPRIGVKADSNLLVTMARIYERNGRREELKKLQRHIEDAPNLTDIQFRQFYNCLLTC 321
+++M ++ V AD+ +V M+ IYE NG R+EL+K + HI P ++ F++ LL+
Sbjct: 237 IELMAKVDVVADAYSIVIMSCIYEMNGMRDELRKFKEHIGQVPPQLLGHYQHFFDNLLSL 296
Query: 322 HLKFGDLDSASNMVLEMLGKAKQARNSLAAAKFINGAAKLDHNYFPGPASVHSLS-NSEV 380
KF D+ SA + L+ + +K + SV +L +SE
Sbjct: 297 EFKFDDIGSAGRLALD-----------MCKSKVL--------------VSVENLGFDSEK 331
Query: 381 MGSLE-NNQPIRSAFSSY--EEFLKDRNFLQLEAESNAVLGSLLAKLQKHVDLITTKHGI 437
L + IRS + + L+ + L ++ E+ V+ +K GI
Sbjct: 332 PRVLPVGSHHIRSGLKIHISPKLLQRDSSLGVDTEAT------------FVNYSNSKLGI 379
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALV-HVINSCISLGWLD 496
T KLV + + +L+ L FS S L VI++C+++GWL+
Sbjct: 380 ---TNKTLAKLVYGYKRHDNLPELSKLL---------FSLGGSRLCADVIDACVAIGWLE 427
Query: 497 QAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMI 556
AHD+LD+M AG + Y +L Y ++ + LL+ KAG+ D S+ E ++
Sbjct: 428 AAHDILDDMNSAGYPMELATYRMVLSGYYKSKMLRNAEVLLKQMTKAGLITDPSN-EIVV 486
Query: 557 QSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQS 616
++D++ E+++ + ++ N G K+ + +L+E+
Sbjct: 487 SPETEEKDSENT-----ELRDLLVQEI---NAGKQMKAPS----------MLYEL----- 523
Query: 617 VDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEV 676
N+ +++FCK ++ DA +K+ + P Q+F ++ Y+++ G Y E+
Sbjct: 524 --------NSSLYYFCKAKMQGDALITYRKIPKMKIPPTVQSFWILIDMYSSL-GMYREI 574
Query: 677 TELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDKYKYR 736
T +WG++K +K Q+LL+ ++ F+RGG+F R E++S M++ M+ D Y+
Sbjct: 575 TIVWGDIKR-NIASKNLKTTQDLLEKLVVNFLRGGYFERVMELISYMKENDMYNDLTMYK 633
Query: 737 MLFLKYHKTLYKG-KAPKFQTESQLNKREAAIAFKRWIGLT 776
+LK HK LY+ KA TE+Q + E F++ +G+
Sbjct: 634 NEYLKLHKNLYRTLKASDAVTEAQAQRLEHVKTFRKLVGIV 674
>AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26047372-26049348 REVERSE
LENGTH=658
Length = 658
Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 118/336 (35%), Positives = 190/336 (56%), Gaps = 11/336 (3%)
Query: 445 YVKLVKAFLEANKTKDLAVFLLKAEREDSPFSN-DNSALVHVINSCISLGWLDQAHDLLD 503
Y +LVK F+E+ K LA +L+A++ +S + D+S +IN+C++LG+ D+AH +L+
Sbjct: 327 YCELVKGFIESKSVKSLAKVILEAQKLESSYVGVDSSVGFGIINACVNLGFSDKAHSILE 386
Query: 504 EM-RLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQ 562
EM G G VY +LKAYC+ R A+ L+ + +G+QLD A+I++ +
Sbjct: 387 EMIAQGGGSVGIGVYVPILKAYCKEYRTAEATQLVTEISSSGLQLDVEISNALIEASMTN 446
Query: 563 EDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVDCGVH 622
+D A LF++M+E ++ + ++T E LM L E+ E V+ H
Sbjct: 447 QDFISAFTLFRDMRENRVVDLKGSYLTIMT-GLLENQRPELMAAFLDEVVEDPRVEVNSH 505
Query: 623 DWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTELWGE 682
DWN++IH FCK ++DA + ++M L + PN QT+ S++ GY + G KY V LW E
Sbjct: 506 DWNSIIHAFCKSGRLEDARRTFRRMVFLRYEPNNQTYLSLINGYVS-GEKYFNVLLLWNE 564
Query: 683 MK---SLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDKYKYRMLF 739
+K S + D L+D+ LY V+GGFF A +VV ++ K+F+DK++Y+ F
Sbjct: 565 IKGKISSVEAEKRSRLDHALVDAFLYALVKGGFFDAAMQVVEKSQEMKIFVDKWRYKQAF 624
Query: 740 LKYHKTLYKGKAPKFQTESQLNKREAAIAFKRWIGL 775
++ HK L + PK + + K E+ +AFK W GL
Sbjct: 625 METHKKL---RLPKLR-KRNYKKMESLVAFKNWAGL 656
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 32/269 (11%)
Query: 83 IENAIDENQLDYSWKLFEQHMHMDGFPRKSVFNKLVT--SYVESLD---TQWLRKAYELE 137
+ ++++ + D +WK F P K + N L+T S VE + L++A+
Sbjct: 65 LHDSLNAHYTDEAWKAFRSLTAASSLPEKRLINSLITHLSGVEGSGESISHRLKRAFASA 124
Query: 138 ERAIEEGKHDLLEKEVLIYL--SLGLAKAGLPVLASTILRKMIGMGHFPRVTAWSAVLAN 195
IE+ LLE E + L S+ LAKA P LA +++ M +F W ++ +
Sbjct: 125 AYVIEKDP-ILLEFETVRTLLESMKLAKAAGPALA--LVKCMFKNRYFVPFDLWGHLVID 181
Query: 196 MSQTADGSYLAAELILEIGYMFQNNRVDPRKKSNAPLIAMKPNTAAFNIAL-AGCLLFDT 254
+ + +GS + + + R + L MKP+ A N AL A C ++
Sbjct: 182 ICRE-NGS---------LAPFLKVFKESCRISVDEKLEFMKPDLVASNAALEACCRQMES 231
Query: 255 SRKAEQLLDMMPRIGVKADSNLLVTMARIYERNGRREELKKLQRHIEDAPNLTD----IQ 310
AE +++ M +GVK D +A +Y R G RE++ +L+ NL D
Sbjct: 232 LADAENVIESMAVLGVKPDELSFGFLAYLYARKGLREKISELE-------NLMDGFGFAS 284
Query: 311 FRQFYNCLLTCHLKFGDLDSASNMVLEML 339
R Y+ +++ ++K GDLDS S+++L L
Sbjct: 285 RRILYSNMISGYVKSGDLDSVSDVILHSL 313
>AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:25933023-25934882 FORWARD
LENGTH=619
Length = 619
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 184/338 (54%), Gaps = 16/338 (4%)
Query: 441 TETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSND--NSALVHVINSCISLGWLDQA 498
+E Y +LV+ F+E+ + LA +++A++ +S S D S ++N+C+ LG+
Sbjct: 295 SEETYCELVRGFIESKSVESLAKLIIEAQKLES-MSTDVGGSVGFGIVNACVKLGF--SG 351
Query: 499 HDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQS 558
+LDE+ G G VY +LKAYC+ R ++ L+ + +G+QLD +Y MI++
Sbjct: 352 KSILDELNAQGGSGGIGVYVPILKAYCKEGRTSEATQLVTEISSSGLQLDVETYNTMIEA 411
Query: 559 RVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVD 618
+ + D AL LF++M+E ++ + R ++T E LM + + E+ E V+
Sbjct: 412 SMTKHDFLSALTLFRDMRETRVADLKRCYLTIMT-GLLENQRPELMAEFVEEVMEDPRVE 470
Query: 619 CGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTE 678
HDWN++IH FCK + DA+ ++M L + PN QT+ S++ GY + KY EV
Sbjct: 471 VKSHDWNSIIHAFCKSGRLGDAKSTFRRMTFLQYEPNNQTYLSLINGYVSC-EKYFEVVV 529
Query: 679 LWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDKYKYRML 738
+W E K K + L D+ L V+GGFF A +V+ ++ K+F+DK++Y+
Sbjct: 530 IWKEFKD-----KKAKLEHALADAFLNALVKGGFFGTALQVIEKCQEMKIFVDKWRYKAT 584
Query: 739 FLKYHKTLYKGKAPKFQTESQLNKREAAIAFKRWIGLT 776
F++ K L + PK + + ++ K E AFK W +T
Sbjct: 585 FMETQKNL---RLPKLR-KRKMKKIEFLDAFKNWARIT 618
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 31/296 (10%)
Query: 62 FSSMAERILVQAQDPAKVSLE--IENAIDENQLDYSWKLFEQHMHMDGFPRKSVFNKLVT 119
FSS+ + L Q K S E + +++ + D +WK+F P K + N L+T
Sbjct: 15 FSSIPSKTLTPHQ---KSSFESTLHHSLITHDTDQAWKVFRSFAAASSLPDKRLLNSLIT 71
Query: 120 SYVESLDTQW-------LRKAYELEERAIEEGKHDLLEKEVL--IYLSLGLAKAGLPVLA 170
+T L++A+ IE+ LLE E + + S+ LAKA P LA
Sbjct: 72 HLSSFHNTDQNTSLRHRLKRAFVSTTYVIEKDPI-LLEFETVRTVLESMKLAKASGPALA 130
Query: 171 STILRKMIGMGHFPRVTAWSAVLANMSQTADGSYLAAELILEIGYMFQNNRVDPRKKSNA 230
++ M +F W +L ++ + +GS LAA L + R R +
Sbjct: 131 --LVECMFKNRYFVPFDLWGDLLIDVCR-ENGS-LAAFL--------KVFRESCRIAVDE 178
Query: 231 PLIAMKPNTAAFNIAL-AGCLLFDTSRKAEQLLDMMPRIGVKADSNLLVTMARIYERNGR 289
L MKP+ A N AL A C ++ AE L++ M +GVK D +A +Y R G
Sbjct: 179 KLDFMKPDLVASNAALEACCRQMESLADAENLIESMDVLGVKPDELSFGFLAYLYARKGL 238
Query: 290 REELKKLQRHIEDAPNLTDIQFRQFYNCLLTCHLKFGDLDSASNMVLEMLGKAKQA 345
RE++ +L+ ++ L R Y+ +++ ++K GDLDSAS+++L L +A
Sbjct: 239 REKISELEDLMD---GLGFASRRILYSSMISGYVKSGDLDSASDVILCSLKGVGEA 291
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 178/359 (49%), Gaps = 25/359 (6%)
Query: 437 ILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSN-DNSALVHVINSCISLGWL 495
+ P IY L+K +++ + D A L R+D S+ D V+++ ++ G +
Sbjct: 409 VFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLM 468
Query: 496 DQAHDLLDEMRLAGVRTGSSVYASLLKAYC---QANRAADVASLLRD-ARKAGIQLDSSS 551
D+A +L EM GV Y LLK YC Q +RA D LLR+ AGI+ D S
Sbjct: 469 DRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAED---LLREMTEDAGIEPDVVS 525
Query: 552 YEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEI 611
Y +I +L +D+ GAL F EM+ I ++ + L K+ A + + L ++ E+
Sbjct: 526 YNIIIDGCILIDDSAGALAFFNEMRTRGIAP-TKISYTTLMKAFAMSGQPKLANRVFDEM 584
Query: 612 KEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGG 671
V + WN ++ +C+ L++DA++ + +M+ G PN T+ S+ G +
Sbjct: 585 MNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQ-AR 643
Query: 672 KYLEVTELWGEMK--------------SLAXXXXXMKFDQELLDSVLYTFVRGGFFTRAN 717
K + LW E+K S +K D+ LLD++ VR FF +A
Sbjct: 644 KPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKAL 703
Query: 718 EVVSMMEKGKMFIDKYKYRMLFLKYHKTLYKGK-APKFQTESQLNKREAAIAFKRWIGL 775
E+++ ME+ + +K KY+ ++++ H ++ K A + + + ++ ++ AA AFK W+GL
Sbjct: 704 EIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRRVERKRAAEAFKFWLGL 762
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 116/261 (44%), Gaps = 27/261 (10%)
Query: 91 QLDYSWKLFEQHMHMDGFPRKSVFNKLVTSYVESLDTQWLRKAYELEERAIEEGKHDLLE 150
+ D +W + Q H+ G + ++LV+ + L +A + R E + L+
Sbjct: 96 KTDEAWAKYVQSTHLPG---PTCLSRLVSQLSYQSKPESLTRAQSILTRLRNERQLHRLD 152
Query: 151 KEVLIYLSLGLAKAGLPVLASTILRKMIGMGHFPRVTAWSAVLANMSQTA-DGSYLAAEL 209
L L++ AK+G + A ++++ MI G+ P V AW+A +A++S + DG + +L
Sbjct: 153 ANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAAVASLSASGDDGPEESIKL 212
Query: 210 ILEIGYMFQNNRVDPRKKSNAPLIAM-KPNTAAFNIALAGCLLFDTSRKAEQLLDMMPRI 268
+ I RV ++ + L+ +P+TAAFN L C + K +L + M
Sbjct: 213 FIAI-----TRRV--KRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEMSEW 265
Query: 269 GVKADSNLLVTMARIYERNGRREELKKLQRHIEDAPNLTDIQFRQFYNCLLTCH------ 322
+ D M ++ R GR+E + + I D + C+ T H
Sbjct: 266 DCEPDVLTYNVMIKLCARVGRKELIVFVLERIID---------KGIKVCMTTMHSLVAAY 316
Query: 323 LKFGDLDSASNMVLEMLGKAK 343
+ FGDL +A +V M K +
Sbjct: 317 VGFGDLRTAERIVQAMREKRR 337
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 145/307 (47%), Gaps = 20/307 (6%)
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
QP E Y ++K ++ +T LA+ LL+ + E+ D +I+ G LD
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTA-LAMELLR-KMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A +L +EM + G + +Y +L++ +C A R D A LLRD K I D ++ A+I
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Query: 558 SRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAET--DEATLMTKLLHEIKEGQ 615
V + + A +L +EM + I + ++ E D+A M L+ + +G
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM--VSKG- 382
Query: 616 SVDCG--VHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKY 673
CG + +N +I+ +CK L+ D + +KM G + T+++++ G+ +G
Sbjct: 383 ---CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG--K 437
Query: 674 LEVT-ELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDK 732
LEV EL+ EM S + + + LLD + G +A E+ +EK KM +D
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSY-KILLDGL----CDNGEPEKALEIFEKIEKSKMELDI 492
Query: 733 YKYRMLF 739
Y ++
Sbjct: 493 GIYNIII 499
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 106/276 (38%), Gaps = 40/276 (14%)
Query: 429 DLITTKHGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINS 488
D+I K + P + L+ F++ K ++ L E S D +I+
Sbjct: 307 DMIKRK---ITPDVVAFSALIDCFVKEGKLREAEE--LHKEMIQRGISPDTVTYTSLIDG 361
Query: 489 CISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLD 548
LD+A+ +LD M G + L+ YC+AN D L R G+ D
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421
Query: 549 SSSYEAMIQSRVLQEDTKGALKLFQEMKEAKI-------------------PKVSRQNPG 589
+ +Y +IQ + A +LFQEM ++ P+ + +
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE 481
Query: 590 MLTKSGAETDEATLMTKLLHEIKEGQSVD------CG---------VHDWNNVIHFFCKK 634
+ KS E D + ++H + VD C V +N +I CKK
Sbjct: 482 KIEKSKMELD-IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKK 540
Query: 635 RLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
+ +A+ +KM GHSPN T++ ++ + G
Sbjct: 541 GSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEG 576
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 10/179 (5%)
Query: 493 GWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSY 552
G + A L+D M G + Y +LK C++ + A LLR + I+LD+ Y
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 553 EAMIQSRVLQEDTKGALKLFQEMK----EAKIPKVSRQNPGMLTKSGAETDEATLMTKLL 608
+I A LF EM+ +A I + G +G D A L+ +
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG-FCYAGRWDDGAKLLRDM- 308
Query: 609 HEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYA 667
IK + D V ++ +I F K+ +++AE+ K+M G SP+ T+ S++ G+
Sbjct: 309 --IKRKITPD--VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFC 363
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 126/598 (21%), Positives = 235/598 (39%), Gaps = 54/598 (9%)
Query: 108 FPRKSVFNKLVTSYVESLDTQWLRKAYELEERAIEEGKHDLLEKEVLIYLSL--GLAKAG 165
FP K+ N L+TS V + + Q +A+++ + + +V ++ + K G
Sbjct: 223 FPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS--------PDVYLFTTAINAFCKGG 274
Query: 166 LPVLASTILRKMIGMGHFPRVTAWSAVLANMSQTA--DGSYLAAELILE-------IGYM 216
A + KM G P V ++ V+ + D +++ E ++E I Y
Sbjct: 275 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 334
Query: 217 FQNNRVDPRKKSNAPLIAMK--------PNTAAFNIALAGCLLFDTSRKAEQLLDMMPRI 268
+ K+ +K PN +N + + + KA ++ D+M
Sbjct: 335 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 394
Query: 269 GVKADSNLLVTMARIYERNGRREELKKLQRH-IEDAPNLTDIQFRQFYNCLLTCHLKFGD 327
G+ S+ T+ + Y +NG+ + ++L + + N+ F CLL HL F
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI-CLLCSHLMF-- 451
Query: 328 LDSASNMVLEMLGKAKQARNSLAAAKFINGAAK---------LDHNYFPGPASVHSLSNS 378
DSA V EML + L I+G K L + V + +++
Sbjct: 452 -DSALRFVGEMLLRNMSPGGGLLTT-LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 379 EVMGSLENNQPIRSAFSSYEEFLKDRNFLQLEAESNAVLGSLLAKLQKHVDLI----TTK 434
++ L + AF +E L R + N ++ K + + K
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEIL-GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 435 HGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGW 494
G L+P Y L+ NK ++ F +R + D +I+ C
Sbjct: 569 RG-LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR--NGMLPDVYTYSVMIDGCCKAER 625
Query: 495 LDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEA 554
++ + DEM V+ + VY L++AYC++ R + L D + GI +S++Y +
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 555 MIQSRVLQEDTKGALKLFQEMK-EAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKE 613
+I+ + + A LF+EM+ E P V L + + + LL E+
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA--LIDGYGKLGQMVKVECLLREM-H 742
Query: 614 GQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGG 671
++V + +I + + + +A + L +MR G P++ T+ + GY GG
Sbjct: 743 SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 800
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 4/180 (2%)
Query: 495 LDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEA 554
L++A+ ++D+M+ G+ Y +L+ +C + SL RD + G+ +Y
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 555 MIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKE- 613
++ + DT GA K+ +EM+E I K S+ +L + A +D +L ++E
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGI-KPSKVTYTILIDTFARSDNMEKAIQLRLSMEEL 437
Query: 614 GQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKY 673
G D VH ++ +IH FC K M +A + K M PN +++M+ GY G Y
Sbjct: 438 GLVPD--VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 118/259 (45%), Gaps = 18/259 (6%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
+I C G ++++ DLL E+ G +Y +L+ C+ L + K G
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGM--LTKSGAETDEA 601
+ + +Y +I K +++++M+E + P + N M L K G D
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288
Query: 602 TLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHS 661
++ E++E + V C + +N +I C++ + +A K + +M+S G +PN T+++
Sbjct: 289 ----QVFDEMRE-RGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 662 MVTGYAAIG--GKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEV 719
++ G+ +G GK L L ++KS + + + ++ F R G + A ++
Sbjct: 344 LIDGFCGVGKLGKAL---SLCRDLKSRGLSPSLVTY-----NILVSGFCRKGDTSGAAKM 395
Query: 720 VSMMEKGKMFIDKYKYRML 738
V ME+ + K Y +L
Sbjct: 396 VKEMEERGIKPSKVTYTIL 414
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 126/598 (21%), Positives = 235/598 (39%), Gaps = 54/598 (9%)
Query: 108 FPRKSVFNKLVTSYVESLDTQWLRKAYELEERAIEEGKHDLLEKEVLIYLSL--GLAKAG 165
FP K+ N L+TS V + + Q +A+++ + + +V ++ + K G
Sbjct: 223 FPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS--------PDVYLFTTAINAFCKGG 274
Query: 166 LPVLASTILRKMIGMGHFPRVTAWSAVLANMSQTA--DGSYLAAELILE-------IGYM 216
A + KM G P V ++ V+ + D +++ E ++E I Y
Sbjct: 275 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 334
Query: 217 FQNNRVDPRKKSNAPLIAMK--------PNTAAFNIALAGCLLFDTSRKAEQLLDMMPRI 268
+ K+ +K PN +N + + + KA ++ D+M
Sbjct: 335 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 394
Query: 269 GVKADSNLLVTMARIYERNGRREELKKLQRH-IEDAPNLTDIQFRQFYNCLLTCHLKFGD 327
G+ S+ T+ + Y +NG+ + ++L + + N+ F CLL HL F
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI-CLLCSHLMF-- 451
Query: 328 LDSASNMVLEMLGKAKQARNSLAAAKFINGAAK---------LDHNYFPGPASVHSLSNS 378
DSA V EML + L I+G K L + V + +++
Sbjct: 452 -DSALRFVGEMLLRNMSPGGGLLTT-LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 379 EVMGSLENNQPIRSAFSSYEEFLKDRNFLQLEAESNAVLGSLLAKLQKHVDLI----TTK 434
++ L + AF +E L R + N ++ K + + K
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEIL-GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 435 HGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGW 494
G L+P Y L+ NK ++ F +R + D +I+ C
Sbjct: 569 RG-LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR--NGMLPDVYTYSVMIDGCCKAER 625
Query: 495 LDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEA 554
++ + DEM V+ + VY L++AYC++ R + L D + GI +S++Y +
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 555 MIQSRVLQEDTKGALKLFQEMK-EAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKE 613
+I+ + + A LF+EM+ E P V L + + + LL E+
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA--LIDGYGKLGQMVKVECLLREM-H 742
Query: 614 GQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGG 671
++V + +I + + + +A + L +MR G P++ T+ + GY GG
Sbjct: 743 SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 800
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 137/304 (45%), Gaps = 14/304 (4%)
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
QP E Y ++ ++ +T LA+ LL+ + E+ D +I+ G LD
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTA-LAMELLR-KMEERNIKLDAVKYSIIIDGLCKDGSLDN 281
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A +L +EM + G + Y +L+ +C A R D A LLRD K I + ++ +I
Sbjct: 282 AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 341
Query: 558 SRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAET--DEATLMTKLLHEIKEGQ 615
S V + + A +L +EM + I + ++ E +EA M L+ I +G
Sbjct: 342 SFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM--ISKGC 399
Query: 616 SVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLE 675
D + +N +I+ +CK + D + ++M G N T++++V G+ GK
Sbjct: 400 DPD--IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ-SGKLEV 456
Query: 676 VTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDKYKY 735
+L+ EM S + + + LLD + G +A E+ +EK KM +D Y
Sbjct: 457 AKKLFQEMVSRRVRPDIVSY-KILLDGL----CDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 736 RMLF 739
++
Sbjct: 512 MIII 515
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 110/501 (21%), Positives = 197/501 (39%), Gaps = 94/501 (18%)
Query: 233 IAMKPNTAAFNIALAGCLLFDTSRKAEQLLDMMPRIGVKADSNLLVTMARIYERNGR-RE 291
+ +P+T FN L G L +A +L+D M +G K L T+ NG+ +
Sbjct: 152 LGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSD 211
Query: 292 ELKKLQRHIEDAPNLTDIQFRQFYNCLLTCHLKFGDLDSASNMVLEMLGKAKQARNSLAA 351
+ + R +E ++ + N + C + + +E+L K ++ L A
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLN--VMCK------SGQTALAMELLRKMEERNIKLDA 263
Query: 352 AKF---INGAAKLDHNYFPGPASVHSLSNSEVMGSLENNQPIRSAFSSYEEFLKDRNFLQ 408
K+ I+G K GSL+N AF+ + E ++ + F
Sbjct: 264 VKYSIIIDGLCK--------------------DGSLDN------AFNLFNE-MEIKGFKA 296
Query: 409 LEAESNAVLGSLL--------AKLQKHVDLITTKHGILQPTETIYVKLVKAFLEANKTKD 460
N ++G AKL + D+I K + P + L+ +F++ K ++
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLR--DMIKRK---ISPNVVTFSVLIDSFVKEGKLRE 351
Query: 461 LAVFLLK--AEREDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYA 518
A LLK +R +P + ++L I+ L++A ++D M G +
Sbjct: 352 -ADQLLKEMMQRGIAPNTITYNSL---IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407
Query: 519 SLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEA 578
L+ YC+ANR D L R+ G+ ++ +Y ++Q + A KLFQEM
Sbjct: 408 ILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Query: 579 KI-PKV------------------SRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVD- 618
++ P + + + G + KS E D M ++H + VD
Sbjct: 468 RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI-IIHGMCNASKVDD 526
Query: 619 -----CGV---------HDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVT 664
C + +N +I C+K + A+ +KM GH+P+ T++ ++
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586
Query: 665 GYAAIGGKYLEVTELWGEMKS 685
+ EL EMKS
Sbjct: 587 AHLG-DDDATTAAELIEEMKS 606
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 134/303 (44%), Gaps = 14/303 (4%)
Query: 439 QPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQA 498
QP Y ++ ++ +T LA+ LL+ + E+ D +I+ G LD A
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTA-LAMELLR-KMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 499 HDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQS 558
+L +EM + G+ T Y L+ +C A R D A LLRD K I + ++ +I S
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Query: 559 RVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAET--DEATLMTKLLHEIKEGQS 616
V + + A +L +EM I + ++ E D+A M L+ +
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS----KG 398
Query: 617 VDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEV 676
D + +N +I+ +CK + D + +KM G + T+++++ G+ + GK
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL-GKLNVA 457
Query: 677 TELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDKYKYR 736
EL+ EM S + + + LLD + G +A E+ +EK KM +D Y
Sbjct: 458 KELFQEMVSRKVPPNIVTY-KILLDGL----CDNGESEKALEIFEKIEKSKMELDIGIYN 512
Query: 737 MLF 739
++
Sbjct: 513 III 515
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 186/492 (37%), Gaps = 105/492 (21%)
Query: 233 IAMKPNTAAFNIALAGCLLFDTSRKAEQLLDMMPRIGVKADSNLLVTMARIYERNGRREE 292
+ +PNT F+ + G L +A +L+D M +G K D + T+ +G+ E
Sbjct: 152 LGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAE 211
Query: 293 -LKKLQRHIEDA--PNLTDIQFRQFYNCLLTCHLKFGDLDSASNMVLEMLGKAKQARNSL 349
+ + + +E PN Y +L K G + + +E+L K ++ L
Sbjct: 212 AMLLIDKMVEYGCQPNAVT------YGPVLNVMCKSGQ----TALAMELLRKMEERNIKL 261
Query: 350 AAAKF---INGAAKLDHNYFPGPASVHSLSNSEVMGSLENNQPIRSAFSSYEEFLKDRNF 406
A K+ I+G K GSL+N AF+ + E ++ +
Sbjct: 262 DAVKYSIIIDGLCK--------------------HGSLDN------AFNLFNE-MEMKGI 294
Query: 407 LQLEAESNAVLGSLL--------AKLQKHVDLITTKHGILQPTETIYVKLVKAFLEANKT 458
N ++G AKL + D+I K + P + L+ +F++ K
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLR--DMIKRK---INPNVVTFSVLIDSFVKEGKL 349
Query: 459 KDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYA 518
++ L E + D +I+ LD+A+ ++D M G +
Sbjct: 350 REAEE--LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 407
Query: 519 SLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEA 578
L+ YC+ANR D L R G+ D+ +Y +IQ A +LFQEM
Sbjct: 408 ILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Query: 579 KIPKVSRQNPGMLT-------------------------KSGAETDEATLMTKLLHEIKE 613
K+P P ++T KS E D + ++H +
Sbjct: 468 KVP------PNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD-IGIYNIIIHGMCN 520
Query: 614 GQSVD------C---------GVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQT 658
VD C GV +N +I CKK + +AE +KM GH+P+ T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580
Query: 659 FHSMVTGYAAIG 670
++ ++ + G
Sbjct: 581 YNILIRAHLGDG 592
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 10/235 (4%)
Query: 439 QPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQA 498
+P L+ F + N+ D A+ L+ ++ E+ F D +I+ +G ++ A
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFD-AIDLV-SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 193
Query: 499 HDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQS 558
+L D M GVR + Y SL+ C + R +D A L+RD I + ++ A+I
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 559 RVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGM--LTKSGAETDEATLMTKLLHEIKEGQ 615
V + A+KL++EM + P V N + L G DEA M L+ + +G
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG-RVDEAKQMLDLM--VTKGC 310
Query: 616 SVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
D V +N +I+ FCK + + + K ++M G + T+++++ GY G
Sbjct: 311 LPD--VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 13/187 (6%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
+IN G +D+A +LD M G Y +L+ +C++ R + L R+ + G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKS----GAETDE 600
+ D+ +Y +IQ A ++F M P + T S G +
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD---------SRPNIRTYSILLYGLCMNW 395
Query: 601 ATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFH 660
+L E + ++ + +N VIH CK ++DA + + G P+ ++
Sbjct: 396 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYT 455
Query: 661 SMVTGYA 667
+M++G+
Sbjct: 456 TMISGFC 462
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 20/240 (8%)
Query: 439 QPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQA 498
+P LV F N+ D AV L+ E + D A +I+S ++ A
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSD-AVSLVDKMVEIG-YKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 499 HDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQS 558
D E+ G+R Y +L+ C ++R +D A LL D K I + +Y A++ +
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 559 RVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGA--------ETDEATLMTKLLHE 610
V A +LF+EM I +P ++T S DEA M L+
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSI------DPDIVTYSSLINGLCLHDRIDEANQMFDLM-- 321
Query: 611 IKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
+ +G D V +N +I+ FCK + ++D K ++M G N T+++++ G+ G
Sbjct: 322 VSKGCLAD--VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 108/259 (41%), Gaps = 14/259 (5%)
Query: 429 DLITTKHGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINS 488
D+I K + P Y L+ AF++ K L L E D +IN
Sbjct: 250 DMIKKK---ITPNVITYSALLDAFVKNGKV--LEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 489 CISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLD 548
+D+A+ + D M G Y +L+ +C+A R D L R+ + G+ +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 549 SSSYEAMIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNP--GMLTKSGAETDEATLMT 605
+ +Y +IQ D A + F +M I P + N G L +G E ++A
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNG-ELEKAL--- 420
Query: 606 KLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTG 665
++ E + + +D + + VI CK +++A + G P+ T+ +M++G
Sbjct: 421 -VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 666 YAAIGGKYLEVTELWGEMK 684
G + EV L+ +MK
Sbjct: 480 LCTKGLLH-EVEALYTKMK 497
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 22/266 (8%)
Query: 483 VHVINSCIS----LGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLR 538
V+ NS IS LG + +A ++LD+M + Y +L+ C+ N+ + L R
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 539 DARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTK---SG 595
GI D ++ ++IQ L + + A++LF+EM+ +K + ML S
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR-SKGCEPDEFTYNMLIDSLCSK 448
Query: 596 AETDEATLMTKLLHEIKEGQSVDCG--VHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHS 653
+ DEA L+ +K+ + C V +N +I FCK ++AE+ +M G S
Sbjct: 449 GKLDEA------LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 654 PNAQTFHSMVTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFF 713
N+ T+++++ G + + +L +M K D+ +S+L F RGG
Sbjct: 503 RNSVTYNTLIDGLCK-SRRVEDAAQLMDQM-----IMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 714 TRANEVVSMMEKGKMFIDKYKYRMLF 739
+A ++V M D Y L
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 11/147 (7%)
Query: 435 HGILQPTETIYVKLVKAFLEANKTKDLAVFL----LKAEREDSPFSNDNSALVHVINSCI 490
HG+ + + T Y L+ ++ + +D A + ++ ++ D NS L H
Sbjct: 499 HGVSRNSVT-YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK--YTYNSLLTHFCRG-- 553
Query: 491 SLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSS 550
G + +A D++ M G Y +L+ C+A R + LLR + GI L
Sbjct: 554 --GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH 611
Query: 551 SYEAMIQSRVLQEDTKGALKLFQEMKE 577
+Y +IQ + T A+ LF+EM E
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLE 638
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 108/274 (39%), Gaps = 48/274 (17%)
Query: 504 EMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQE 563
+M + G++ S + L+KA C+A++ +L D G+ D ++ ++Q + +
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 564 DTKGALKLFQEM--------------------KEAKIPKVSRQNPGMLTKSGAETDEATL 603
D GAL++ ++M KE ++ M + G D+ T
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 604 MTKLLHEIKEG--------------QSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRS 649
T + K G + D V+ +N+VI CK +++A + L +M +
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 650 LGHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVR 709
SPN T++++++ + E TEL + S F+ + ++
Sbjct: 359 RDCSPNTVTYNTLISTLCK-ENQVEEATELARVLTSKGILPDVCTFN---------SLIQ 408
Query: 710 GGFFTR----ANEVVSMMEKGKMFIDKYKYRMLF 739
G TR A E+ M D++ Y ML
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 22/241 (9%)
Query: 439 QPTETIYVKLVKAFLEANKTKD---LAVFLLKAEREDSPFSNDNSALVHVINSCISLGWL 495
+P+ + L+ F N+ D L + ++K+ E + + +I+ G L
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNT-----LIDGLCKNGEL 192
Query: 496 DQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAM 555
+ A +LL+EM G+ Y +LL C + R +D A +LRD K I D ++ A+
Sbjct: 193 NIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 556 IQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEG- 614
I V Q + A +L++EM ++ + +P +T + M L++ K+
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSV------DPNNVTYN--SIINGLCMHGRLYDAKKTF 304
Query: 615 ---QSVDC--GVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAI 669
S C V +N +I FCK R++ + K ++M G + + T+++++ GY +
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364
Query: 670 G 670
G
Sbjct: 365 G 365
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 107/267 (40%), Gaps = 43/267 (16%)
Query: 439 QPTETI--YVKLVKAFLEANKTKDLAVFLLKAEREDSPFSND---NSALVHVINSCISLG 493
QP +I + +L+ A AN + V + E S+D + L+H C L
Sbjct: 66 QPLPSIVDFTRLLTA--TANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLS 123
Query: 494 WLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYE 553
+ A +L +M G + SLL +C NR D SL+ K+G + + Y
Sbjct: 124 F---ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYN 180
Query: 554 AMIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGM--LTKSGAETDEATLMTKLLHE 610
+I + AL+L EM++ + V N + L SG +D A ++ ++
Sbjct: 181 TLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR 240
Query: 611 ----------------IKEGQ--------------SVDCGVHDWNNVIHFFCKKRLMQDA 640
+K+G SVD +N++I+ C + DA
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300
Query: 641 EKALKKMRSLGHSPNAQTFHSMVTGYA 667
+K M S G PN T++++++G+
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLISGFC 327
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 10/236 (4%)
Query: 438 LQPTETIYVKLVKAFLEANKTKD-LAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLD 496
+P + L+ F N+ ++ +++ E P D +I+S G ++
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKP---DVVMYTTIIDSLCKNGHVN 194
Query: 497 QAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMI 556
A L D+M G+R +Y SL+ C + R D SLLR K I+ D ++ A+I
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 557 QSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAE--TDEATLMTKLLHEIKEG 614
+ V + A +L+ EM I ++ E DEA M L+ E
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM----ET 310
Query: 615 QSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
+ V + ++I+ FCK + + DA K +M G + N T+ +++ G+ +G
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 8/176 (4%)
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A L +M G + SL+ +C NR + S++ + GI+ D Y +I
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIID 185
Query: 558 SRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGM--LTKSGAETDEATLMTKLLHEIKEG 614
S AL LF +M+ I P V + L SG D +L+ +
Sbjct: 186 SLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK----- 240
Query: 615 QSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
+ + V +N +I F K+ DAE+ +M + +PN T+ S++ G+ G
Sbjct: 241 RKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 109/246 (44%), Gaps = 15/246 (6%)
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
P+ Y L+ K +D A+ +L+ +E S D + V++ +D+
Sbjct: 411 FSPSVVTYNALINGHCVTGKMED-AIAVLEDMKEKG-LSPDVVSYSTVLSGFCRSYDVDE 468
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A + EM G++ + Y+SL++ +C+ R + L + + G+ D +Y A+I
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 558 SRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGM--LTKSGAETDEATLMTKLLHEIKEG 614
+ ++ D + AL+L EM E + P V + + L K + L+ KL +E
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVP 588
Query: 615 QSV-------DCGVHDWNNVIHF---FCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVT 664
V +C ++ +V+ FC K +M +A++ + M H P+ ++ M+
Sbjct: 589 SDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIH 648
Query: 665 GYAAIG 670
G+ G
Sbjct: 649 GHCRAG 654
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 106/238 (44%), Gaps = 22/238 (9%)
Query: 442 ETIYVKLVKAFL-EANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAHD 500
E Y L+K + E N + L + +P ++L+H S G +++A +
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIH---SMCKAGNMNRAME 366
Query: 501 LLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRV 560
LD+MR+ G+ Y +L+ + Q + +LR+ G +Y A+I
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 561 LQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGA--------ETDEATLMTKLLHEIK 612
+ + A+ + ++MKE + +P +++ S + DEA + + + ++
Sbjct: 427 VTGKMEDAIAVLEDMKEKGL------SPDVVSYSTVLSGFCRSYDVDEALRVKREM--VE 478
Query: 613 EGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
+G D ++++I FC++R ++A ++M +G P+ T+ +++ Y G
Sbjct: 479 KGIKPD--TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 76/192 (39%), Gaps = 30/192 (15%)
Query: 493 GWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSY 552
G +D A L D+M G Y +L+ YC+ + D LLR G++ + SY
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 553 EAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIK 612
+I +E ++ +VS M + G DE T T + K
Sbjct: 279 NVVINGLC---------------REGRMKEVSFVLTEM-NRRGYSLDEVTYNTLIKGYCK 322
Query: 613 EG--------------QSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQT 658
EG + V + ++IH CK M A + L +MR G PN +T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 659 FHSMVTGYAAIG 670
+ ++V G++ G
Sbjct: 383 YTTLVDGFSQKG 394
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 105/250 (42%), Gaps = 11/250 (4%)
Query: 438 LQPTETIYVKLVKAFLEANK---TKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGW 494
++P + L+ AF++ K K+L +++ F+ + +IN G
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS-----LINGLCMYGL 308
Query: 495 LDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEA 554
LD+A + M G +Y +L+ +C++ R D + + + G+ ++ +Y
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 555 MIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEG 614
+IQ L A ++F +M + P R +L G + ++ E
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL--DGLCCNGKVEKALMIFEYMRK 426
Query: 615 QSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYL 674
+ +D + + +I CK ++DA + S G PN T+ +M++G+ G +
Sbjct: 427 REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH- 485
Query: 675 EVTELWGEMK 684
E L+ +MK
Sbjct: 486 EADSLFKKMK 495
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 111/280 (39%), Gaps = 26/280 (9%)
Query: 475 FSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVA 534
++ D + V+N G LD+ L++ M+ G++ S +Y S++ C+ + A+
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 535 SLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKS 594
+ + GI D+ Y +I + D + A K F EM I P +LT +
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI------TPDVLTYT 390
Query: 595 G-----AETDEATLMTKLLHEI----KEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALK 645
+ + KL HE+ E SV + +I+ +CK M+DA +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV-----TFTELINGYCKAGHMKDAFRVHN 445
Query: 646 KMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLY 705
M G SPN T+ +++ G G EL EM + + +S++
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCK-EGDLDSANELLHEMWKIGLQPNIFTY-----NSIVN 499
Query: 706 TFVRGGFFTRANEVVSMMEKGKMFIDKYKYRMLFLKYHKT 745
+ G A ++V E + D Y L Y K+
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 131/322 (40%), Gaps = 28/322 (8%)
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
L+P + +L+ + +A KD F + + S + +I+ G LD
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKD--AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A++LL EM G++ Y S++ C++ + L+ + AG+ D+ +Y ++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 558 SRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGM--LTKSGAETDEATLMTKLLHEIKEG 614
+ + A ++ +EM + P + N M G D L+ +L
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML-----A 589
Query: 615 QSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYL 674
+ + +N+++ +C + ++ A K M S G P+ +T+ ++V G+ K
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC----KAR 645
Query: 675 EVTELW---GEMKSLAXXXXXMKFDQELLDSVLYT-FVRGGFFTRANEVVSMMEKGKMFI 730
+ E W EMK + SVL F++ F A EV M + +
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTY------SVLIKGFLKRKKFLEAREVFDQMRREGLAA 699
Query: 731 DKYKYRMLFLKYHKTLYKGKAP 752
DK +F + T YKGK P
Sbjct: 700 DK----EIFDFFSDTKYKGKRP 717
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 111/280 (39%), Gaps = 26/280 (9%)
Query: 475 FSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVA 534
++ D + V+N G LD+ L++ M+ G++ S +Y S++ C+ + A+
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 535 SLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKS 594
+ + GI D+ Y +I + D + A K F EM I P +LT +
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDI------TPDVLTYT 390
Query: 595 G-----AETDEATLMTKLLHEI----KEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALK 645
+ + KL HE+ E SV + +I+ +CK M+DA +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV-----TFTELINGYCKAGHMKDAFRVHN 445
Query: 646 KMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLY 705
M G SPN T+ +++ G G EL EM + + +S++
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCK-EGDLDSANELLHEMWKIGLQPNIFTY-----NSIVN 499
Query: 706 TFVRGGFFTRANEVVSMMEKGKMFIDKYKYRMLFLKYHKT 745
+ G A ++V E + D Y L Y K+
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 131/322 (40%), Gaps = 28/322 (8%)
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
L+P + +L+ + +A KD F + + S + +I+ G LD
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKD--AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A++LL EM G++ Y S++ C++ + L+ + AG+ D+ +Y ++
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 558 SRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGM--LTKSGAETDEATLMTKLLHEIKEG 614
+ + A ++ +EM + P + N M G D L+ +L
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML-----A 589
Query: 615 QSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYL 674
+ + +N+++ +C + ++ A K M S G P+ +T+ ++V G+ K
Sbjct: 590 KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC----KAR 645
Query: 675 EVTELW---GEMKSLAXXXXXMKFDQELLDSVLYT-FVRGGFFTRANEVVSMMEKGKMFI 730
+ E W EMK + SVL F++ F A EV M + +
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTY------SVLIKGFLKRKKFLEAREVFDQMRREGLAA 699
Query: 731 DKYKYRMLFLKYHKTLYKGKAP 752
DK +F + T YKGK P
Sbjct: 700 DK----EIFDFFSDTKYKGKRP 717
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 134/644 (20%), Positives = 232/644 (36%), Gaps = 138/644 (21%)
Query: 83 IENAIDENQLDYSWKLFEQHMHMDGFPRKSVFNKLVTSYVESLDTQWLRKAYELEERAIE 142
+ N + + +LD + LF + P FNKL+++ + + E +R
Sbjct: 57 LRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL-- 114
Query: 143 EGKHDLLEKEVLIYLSLGLAKAGLPVLASTILRKMIGMGHFPRVTAWSAVL---ANMSQT 199
E H L +LI + LA +L KM+ +G+ P + S++L + +
Sbjct: 115 EIVHGLYTYNILINC---FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 200 ADGSYLAAELILEIGYMFQNNRVDPRKKSNAPLIAMKPNTAAFNIALAGCLLFDTSRKAE 259
+D L +++ E+GY +P+T F + G L + + +A
Sbjct: 172 SDAVALVDQMV-EMGY--------------------RPDTITFTTLIHGLFLHNKASEAV 210
Query: 260 QLLDMMPRIGVKADSNLLVTMARIYERNGRREELKKLQRHIEDAPNLTDIQFRQFYNCLL 319
L+D M + G + PNL Y ++
Sbjct: 211 ALVDRMVQRGCQ--------------------------------PNLVT------YGVVV 232
Query: 320 TCHLKFGDLDSASNMVLEMLGKAKQARNSLAAAKFINGAAKLDH-----NYFPGPASVHS 374
K GD D A N+ L + AK + + I+ K H N F +
Sbjct: 233 NGLCKRGDTDLALNL-LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Query: 375 LSNSEVMGSLENNQPIRSAFSSYEEFLKDRNFLQLEAESNAVLGSLLAKLQKHVDLITTK 434
N SL + +S + L D +E + N L + A + V K
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSD----MIEKKINPNLVTFNALIDAFV-----K 342
Query: 435 HGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGW 494
G E +Y ++K ++ D +F + ++N
Sbjct: 343 EGKFVEAEKLYDDMIK------RSIDPDIFTYNS----------------LVNGFCMHDR 380
Query: 495 LDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEA 554
LD+A + + M Y +L+K +C++ R D L R+ G+ D+ +Y
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 555 MIQSRVLQEDTKGALKLFQEMKEAKIPKV---------SRQNPGMLTKSGAETD------ 599
+IQ D A K+F++M +P N G L K+ D
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 600 ---EATLMTKLLHEIKEGQSVDCG---------------VHDWNNVIHFFCKKRLMQDAE 641
+ + T ++ + + VD G V +N +I C KRL+Q+A
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 642 KALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEMKS 685
LKKM+ G PN+ T+++++ + G K EL EM+S
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAAS-AELIREMRS 603
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 22/303 (7%)
Query: 439 QPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQA 498
QP Y +V + T DLA+ LL + E + D +I+S +D A
Sbjct: 222 QPNLVTYGVVVNGLCKRGDT-DLALNLLN-KMEAAKIEADVVIFNTIIDSLCKYRHVDDA 279
Query: 499 HDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQS 558
+L EM G+R Y+SL+ C R +D + LL D + I + ++ A+I +
Sbjct: 280 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339
Query: 559 RVLQEDTKGALKLFQEMKEAKI-PKVSRQNP---GMLTKSGAETDEATLMTKLLHEIKEG 614
V + A KL+ +M + I P + N G D+A M + +
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD--RLDKAKQMFEFM------ 391
Query: 615 QSVDC--GVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGK 672
S DC V +N +I FCK + ++D + ++M G + T+ +++ G G
Sbjct: 392 VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH-DGD 450
Query: 673 YLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDK 732
+++ +M S M + LLD + G +A EV M+K ++ +D
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTY-SILLDGL----CNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 733 YKY 735
Y Y
Sbjct: 506 YIY 508
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 12/253 (4%)
Query: 501 LLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRV 560
LL +M G +SLL YC R +D +L+ + G + D+ ++ +I
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 561 LQEDTKGALKLFQEMKEAKI-PKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVDC 619
L A+ L M + P + G++ + + L LL+++ E ++
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTY--GVVVNGLCKRGDTDLALNLLNKM-EAAKIEA 258
Query: 620 GVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTEL 679
V +N +I CK R + DA K+M + G PN T+ S+++ + G++ + ++L
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY-GRWSDASQL 317
Query: 680 WGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDKYKYRMLF 739
+M + F+ L+D+ FV+ G F A ++ M K + D + Y L
Sbjct: 318 LSDMIEKKINPNLVTFNA-LIDA----FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLV 372
Query: 740 LKY--HKTLYKGK 750
+ H L K K
Sbjct: 373 NGFCMHDRLDKAK 385
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 124/612 (20%), Positives = 224/612 (36%), Gaps = 136/612 (22%)
Query: 91 QLDYSWKLFEQHMHMDGFPRKSVFNKLVTSYVESLDTQWLRKAYELEERAIEEG-KHDLL 149
++D + LF + FP FNKL+++ + L E+ G HDL
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAK---MNKFELVISLGEQMQTLGISHDLY 119
Query: 150 EKEVLIYLSLGLAKAGLPVLASTILRKMIGMGHFPRVTAWSAVL---ANMSQTADGSYLA 206
+ I + LA +L KM+ +G+ P + S++L + + +D L
Sbjct: 120 TYSIFINC---FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 207 AELILEIGYMFQNNRVDPRKKSNAPLIAMKPNTAAFNIALAGCLLFDTSRKAEQLLDMMP 266
+++ E+GY KP+T F + G L + + +A L+D M
Sbjct: 177 DQMV-EMGY--------------------KPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 267 RIGVKADSNLLVTMARIYERNGRREELKKLQRHIEDAPNLTDIQFRQFYNCLLTCHLKFG 326
+ G + D LVT Y ++ K G
Sbjct: 216 QRGCQPD---LVT-----------------------------------YGTVVNGLCKRG 237
Query: 327 DLDSASNMVLEMLGKAKQARNSLAAAKFINGAAKLDHNYFPGPASVHSLSNSEVMGSLEN 386
D+D A N+ L + A+ N + I+ K H +V + E G
Sbjct: 238 DIDLALNL-LNKMEAARIKANVVIFNTIIDSLCKYRH----VEVAVDLFTEMETKG---- 288
Query: 387 NQPIRSAFSSYEEFLKDRNFLQLEAESNAVLGSLLAKLQKHVDLITTKHGILQPTETIYV 446
IR +Y + ++++ +L ++L K + P +
Sbjct: 289 ---IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK-------------INPNVVTFN 332
Query: 447 KLVKAFLEANKTKDLAVFLLKAER---EDSPFSNDNSALVH--VINSCISLGWLDQAHDL 501
L+ AF + K L++AE+ E S D + + +IN LD+A +
Sbjct: 333 ALIDAFFKEGK-------LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 502 LDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVL 561
M Y +L+ +C+ R D L R+ + G+ ++ +Y +IQ
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 562 QEDTKGALKLFQEMKEAKIPKVSRQNPGML--TKSGAETDEATLMTKLLHE--------- 610
D A +F++M ++P +L S + D A ++ K L +
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI 505
Query: 611 --------IKEGQ-----------SVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLG 651
K G+ S+ V +N +I C KRL+Q+A+ +KM+ G
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 652 HSPNAQTFHSMV 663
PN+ T+++++
Sbjct: 566 TLPNSGTYNTLI 577
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 102/233 (43%), Gaps = 21/233 (9%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
V+N G +D A +LL++M A ++ ++ +++ + C+ L + G
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSG---AETDEA 601
I+ + +Y ++I A +L M E KI NP ++T + A E
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI------NPNVVTFNALIDAFFKEG 342
Query: 602 TLM-TKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFH 660
L+ + LHE +S+D +N +I+ FC + +A++ K M S PN QT++
Sbjct: 343 KLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYN 402
Query: 661 SMVTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFF 713
+++ G+ + + EL+ EM ++V YT + GFF
Sbjct: 403 TLINGFCKC-KRVEDGVELFREMSQRGLVG----------NTVTYTTIIQGFF 444
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 94/232 (40%), Gaps = 6/232 (2%)
Query: 440 PTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAH 499
P+ + KL+ A + NK + V L + + S+D IN L A
Sbjct: 81 PSIVEFNKLLSAVAKMNKFE--LVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 500 DLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSR 559
+L +M G +SLL YC + R +D +L+ + G + D+ ++ +I
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 560 VLQEDTKGALKLFQEMKEAKI-PKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVD 618
L A+ L +M + P + G + + + L LL+++ E +
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTY--GTVVNGLCKRGDIDLALNLLNKM-EAARIK 255
Query: 619 CGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
V +N +I CK R ++ A +M + G PN T++S++ G
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 133/307 (43%), Gaps = 20/307 (6%)
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVH---VINSCISLGW 494
QP E Y ++ ++ + LA+ L + E N +++V VI+S G
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSA-LALDLFRKMEE----RNIKASVVQYSIVIDSLCKDGS 260
Query: 495 LDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEA 554
D A L +EM + G++ Y+SL+ C + D A +LR+ I D ++ A
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 555 MIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAET--DEATLMTKLLHEIK 612
+I V + A +L+ EM I + ++ E EA M L+ +
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM--VS 378
Query: 613 EGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGK 672
+G D + ++ +I+ +CK + + D + +++ S G PN T++++V G+ GK
Sbjct: 379 KGCEPD--IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ-SGK 435
Query: 673 YLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDK 732
EL+ EM S + + LLD + G +A E+ M+K +M +
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGI-LLDGL----CDNGELNKALEIFEKMQKSRMTLGI 490
Query: 733 YKYRMLF 739
Y ++
Sbjct: 491 GIYNIII 497
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 109/273 (39%), Gaps = 14/273 (5%)
Query: 475 FSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVA 534
+ D ++N G + +A L+D M R ++L+ C R ++
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 535 SLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGM---L 591
L+ + G Q D +Y ++ ++ AL LF++M+E I Q + L
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 592 TKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLG 651
K G+ D +L ++ E + + V ++++I C D K L++M
Sbjct: 256 CKDGSFDDALSLFNEM-----EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 652 HSPNAQTFHSMVTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGG 711
P+ TF +++ + GK LE EL+ EM + + + +S++ F +
Sbjct: 311 IIPDVVTFSALIDVFVK-EGKLLEAKELYNEMITRGIAPDTITY-----NSLIDGFCKEN 364
Query: 712 FFTRANEVVSMMEKGKMFIDKYKYRMLFLKYHK 744
AN++ +M D Y +L Y K
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 101/233 (43%), Gaps = 12/233 (5%)
Query: 439 QPTETIYVKLVKAF-LEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
+P + LV F LE ++ +A+ E + P D + +IN G + +
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP---DLVTVSTLINGLCLKGRVSE 193
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A L+D M G + Y +L C++ +A L R + I+ Y +I
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 558 SRVLQEDTKGALKLFQ--EMKEAKIPKVSRQN-PGMLTKSGAETDEATLMTKLLHEIKEG 614
S AL LF EMK K V+ + G L G D A ++ +++ G
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI-----G 308
Query: 615 QSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYA 667
+++ V ++ +I F K+ + +A++ +M + G +P+ T++S++ G+
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 129/282 (45%), Gaps = 14/282 (4%)
Query: 392 SAFSSYEEFLKDRNFLQLEAESNAV-----LGSLLAKLQKHVDLITTKHGILQPTETIYV 446
+AF+ +E+ +K+ + +N + +G++ +Q ++ +H +PT ++
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH---RPTTRTFM 593
Query: 447 KLVKAFLEA-NKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEM 505
++ + ++ + + L VF + P + + L IN + +++A ++LDEM
Sbjct: 594 PIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL---INGLVEKRQMEKAVEILDEM 650
Query: 506 RLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDT 565
LAGV Y +++ Y + G+ +D +YEA++++
Sbjct: 651 TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM 710
Query: 566 KGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWN 625
+ AL + +EM IP+ S +L A + L+ ++K+ + V +H +
Sbjct: 711 QSALAVTKEMSARNIPRNSFVY-NILIDGWARRGDVWEAADLIQQMKK-EGVKPDIHTYT 768
Query: 626 NVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYA 667
+ I K M A + +++M +LG PN +T+ +++ G+A
Sbjct: 769 SFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWA 810
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 110/279 (39%), Gaps = 41/279 (14%)
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
+ PT IY L+ A+ + + K + E S +++ + G +
Sbjct: 340 ITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVI--VGGFSKAGHAEA 397
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A DE + +S+Y ++ A+CQ +L+R+ + GI + Y M+
Sbjct: 398 ADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMD 457
Query: 558 SRVLQEDTKGALKLFQEMKEA-----------------KIPKVSR--QNPGMLTKSGAE- 597
+ D K L +F+ +KE K+ K+S+ + ++ + G +
Sbjct: 458 GYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKH 517
Query: 598 ---------------TDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEK 642
D A +KEG D V +NN+I FC M A +
Sbjct: 518 NLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD--VILYNNIISAFCGMGNMDRAIQ 575
Query: 643 ALKKMRSLGHSPNAQTFHSMVTGYAAIGG--KYLEVTEL 679
+K+M+ L H P +TF ++ GYA G + LEV ++
Sbjct: 576 TVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDM 614
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 11/246 (4%)
Query: 434 KHGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLG 493
+ GI P + + + A++ K L VF E +P L IN +G
Sbjct: 442 EEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL---INLYTKVG 498
Query: 494 WLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYE 553
+ +A ++ M+ GV+ Y+ ++ + + A+ ++ D K G++ D Y
Sbjct: 499 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYN 558
Query: 554 AMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKE 613
+I + + A++ +EM++ + +R ++ D M + L
Sbjct: 559 NIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD----MRRSLEVFDM 614
Query: 614 GQSVDC--GVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIG- 670
+ C VH +N +I+ +KR M+ A + L +M G S N T+ ++ GYA++G
Sbjct: 615 MRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 671 -GKYLE 675
GK E
Sbjct: 675 TGKAFE 680
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 120/607 (19%), Positives = 233/607 (38%), Gaps = 117/607 (19%)
Query: 91 QLDYSWKLFEQHMHMDGFPRKSVFNKLVTSYVESLDTQWLRKAYELEERAIEEG-KHDLL 149
++D + LF + FP FNKL+++ + L E+ G HDL
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAK---MNKFELVISLGEQMQTLGISHDLY 119
Query: 150 EKEVLIYLSLGLAKAGLPVLASTILRKMIGMGHFPRVTAWSAVL---ANMSQTADGSYLA 206
+ I + LA +L KM+ +G+ P + S++L + + +D L
Sbjct: 120 TYSIFINC---FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 207 AELILEIGYMFQNNRVDPRKKSNAPLIAMKPNTAAFNIALAGCLLFDTSRKAEQLLDMMP 266
+++ E+GY KP+T F + G L + + +A L+D M
Sbjct: 177 DQMV-EMGY--------------------KPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 267 RIGVKADSNLLVTMARIYERNGRREELKKLQRHIEDAPNLTDIQFRQFYNCLLTCHLKFG 326
+ G + D LVT Y ++ K G
Sbjct: 216 QRGCQPD---LVT-----------------------------------YGTVVNGLCKRG 237
Query: 327 DLDSASNMVLEMLGKAKQARNSLAAAKFINGAAKLDHNYFPGPASVHSLSNSEVMGSLEN 386
D+D A ++ L+ + K K + + I+G K H + ++ + + +
Sbjct: 238 DIDLALSL-LKKMEKGKIEADVVIYNTIIDGLCKYKH-----------MDDALNLFTEMD 285
Query: 387 NQPIRSAFSSYEEFLKDRNFLQLEAESNAVLGSLLAKLQKHVDLITTKHGILQPTETIYV 446
N+ IR +Y + ++++ +L D+I K + P +
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLS----------DMIERK---INPNVVTFS 332
Query: 447 KLVKAFLEANKTKDLAVFLLKAER---EDSPFSNDNSALVH--VINSCISLGWLDQAHDL 501
L+ AF++ K L++AE+ E S D + +IN LD+A +
Sbjct: 333 ALIDAFVKEGK-------LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 502 LDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVL 561
+ M Y++L+K +C+A R + L R+ + G+ ++ +Y +I
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 562 QEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKS----GAETDEATLMTKLLHEIKEGQSV 617
D A +F++M + +P +LT + G + ++ E + ++
Sbjct: 446 ARDCDNAQMVFKQMVSVGV------HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 618 DCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVT 677
+ ++ +N +I CK ++D + + G SPN +++M++G+ G K E
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE-EAD 558
Query: 678 ELWGEMK 684
L +MK
Sbjct: 559 SLLKKMK 565
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 124/300 (41%), Gaps = 12/300 (4%)
Query: 440 PTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAH 499
P+ + KL+ A + NK + V L + + S+D IN L A
Sbjct: 81 PSIVEFNKLLSAVAKMNKFE--LVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 500 DLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSR 559
+L +M G +SLL YC + R +D +L+ + G + D+ ++ +I
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 560 VLQEDTKGALKLFQEMKEAKI-PKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVD 618
L A+ L +M + P + G + + + L LL ++++G+ ++
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTY--GTVVNGLCKRGDIDLALSLLKKMEKGK-IE 255
Query: 619 CGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTE 678
V +N +I CK + M DA +M + G P+ T+ S+++ G++ + +
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY-GRWSDASR 314
Query: 679 LWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDKYKYRML 738
L +M + F L+D+ FV+ G A ++ M K + D + Y L
Sbjct: 315 LLSDMIERKINPNVVTF-SALIDA----FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 14/243 (5%)
Query: 441 TETIYVKLVKAFLEAN-KTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAH 499
T I+ L+K + EA K L+ F E +P + ++ V+ S G+L +A
Sbjct: 118 TGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVS--HRGYLQKAF 175
Query: 500 DLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSR 559
+L RL GV + Y L++A+C + + L + + D SY+ +IQ
Sbjct: 176 ELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGF 235
Query: 560 VLQEDTKGALKLFQEM-KEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIK-EGQSV 617
+ GA++L +M + +P R + L S + KLL +K +G +
Sbjct: 236 CRKGQVNGAMELLDDMLNKGFVP--DRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNP 293
Query: 618 DCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAI-----GGK 672
D VH +N +I FC++ DA K L M S G SPN+ ++ +++ G G K
Sbjct: 294 DL-VH-YNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKK 351
Query: 673 YLE 675
YLE
Sbjct: 352 YLE 354
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 30/310 (9%)
Query: 439 QPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVH--VINSCISLGWLD 496
QP Y +V + T DLA LL + + L++ +I+ +D
Sbjct: 218 QPDLVTYGVVVNGLCKRGDT-DLAFNLLNKMEQGKL---EPGVLIYNTIIDGLCKYKHMD 273
Query: 497 QAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMI 556
A +L EM G+R Y+SL+ C R +D + LL D + I D ++ A+I
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 557 QSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGA--------ETDEATLMTKLL 608
+ V + A KL+ EM + I +P ++T S DEA K +
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSI------DPSIVTYSSLINGFCMHDRLDEA----KQM 383
Query: 609 HEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAA 668
E + V +N +I FCK + +++ + ++M G N T++ ++ G
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 669 IGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKM 728
G + E++ EM S M ++ LLD + + G +A V +++ KM
Sbjct: 444 AGDCDM-AQEIFKEMVSDGVPPNIMTYNT-LLDGL----CKNGKLEKAMVVFEYLQRSKM 497
Query: 729 FIDKYKYRML 738
Y Y ++
Sbjct: 498 EPTIYTYNIM 507
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 128/609 (21%), Positives = 236/609 (38%), Gaps = 109/609 (17%)
Query: 85 NAIDENQLDYSWKLFEQHMHMDGFPRKSVFNKLVTSYVESLDTQWLRKAYELEERAIEEG 144
N + E +LD + LF + + FP F+KL+++ + L E+ G
Sbjct: 55 NGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAK---MNKFDVVISLGEQMQNLG 111
Query: 145 -KHDLLEKEVLIYLSLGLAKAGLPVLASTILRKMIGMGHFPRVTAWSAVLANMSQTADGS 203
H+ +LI + ++ LP LA +L KM+ +G+ P + S++L S
Sbjct: 112 IPHNHYTYSILI--NCFCRRSQLP-LALAVLGKMMKLGYEPNIVTLSSLLNGYCH----S 164
Query: 204 YLAAELILEIGYMFQNNRVDPRKKSNAPLIAMKPNTAAFNIALAGCLLFDTSRKAEQLLD 263
+E + + MF + +PNT FN + G L + + +A L+D
Sbjct: 165 KRISEAVALVDQMF--------------VTGYQPNTVTFNTLIHGLFLHNKASEAMALID 210
Query: 264 MMPRIGVKADSNLLVTMARIYERNGRREELKKLQRHIEDAPNLTDIQFRQFYNCLLTCHL 323
M G + D LVT Y ++
Sbjct: 211 RMVAKGCQPD---LVT-----------------------------------YGVVVNGLC 232
Query: 324 KFGDLDSASNMVLEMLGKAKQARNSLAAAKFINGAAKLDHNYFPGPASVHSLSNSEVMGS 383
K GD D A N+ L + + K L I+G K H +++ E G
Sbjct: 233 KRGDTDLAFNL-LNKMEQGKLEPGVLIYNTIIDGLCKYKHM----DDALNLFKEMETKG- 286
Query: 384 LENNQPIRSAFSSYEEFLKDRNFLQLEAESNAVLGSLLAKLQKHVDLITTKHGILQPTET 443
IR +Y + ++++ +L D+I K + P
Sbjct: 287 ------IRPNVVTYSSLISCLCNYGRWSDASRLLS----------DMIERK---INPDVF 327
Query: 444 IYVKLVKAFLEANKTKDLAVFLLKAER---EDSPFSNDNSALVH--VINSCISLGWLDQA 498
+ L+ AF++ K L++AE+ E S D S + + +IN LD+A
Sbjct: 328 TFSALIDAFVKEGK-------LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 499 HDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQS 558
+ + M Y +L+K +C+ R + + R+ + G+ ++ +Y +IQ
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 559 RVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGM--LTKSGAETDEATLMTKLLHEIKEGQ 615
D A ++F+EM + P + N + L K+G + ++A ++ + L K
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG-KLEKAMVVFEYLQRSK--- 496
Query: 616 SVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLE 675
++ ++ +N +I CK ++D + G P+ +++M++G+ G K E
Sbjct: 497 -MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE-E 554
Query: 676 VTELWGEMK 684
L+ EMK
Sbjct: 555 ADALFKEMK 563
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 113/255 (44%), Gaps = 14/255 (5%)
Query: 493 GWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSY 552
G +A +L EM S Y L+ AY +A + + A ++ K G+ ++ +Y
Sbjct: 330 GVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITY 389
Query: 553 EAMIQSRVLQEDTKGALKLFQEMKEAK-IPKVSRQNPGMLTKSGAETDEATLMTKLLHEI 611
+I + ALKLF MKEA +P N +L+ G ++ + M K+L ++
Sbjct: 390 TTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYN-AVLSLLGKKS-RSNEMIKMLCDM 447
Query: 612 KEGQSVDCGVH--DWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAI 669
K S C + WN ++ K + + + ++M+S G P+ TF+++++ Y
Sbjct: 448 K---SNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRC 504
Query: 670 GGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMF 729
G + ++ ++++GEM + +++L R G + V+S M+
Sbjct: 505 GSE-VDASKMYGEMTRAGFNACVTTY-----NALLNALARKGDWRSGENVISDMKSKGFK 558
Query: 730 IDKYKYRMLFLKYHK 744
+ Y ++ Y K
Sbjct: 559 PTETSYSLMLQCYAK 573
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 105/248 (42%), Gaps = 12/248 (4%)
Query: 497 QAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMI 556
+A +L+EM L G Y SL+ AY + + L + G + D +Y ++
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 557 QSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGMLTKSGAETDEATLMTKLLHEIKE-G 614
+ A+ +F+EM+ A P + N K + T M K+ EI G
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAGCKPNICTFN--AFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 615 QSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYL 674
S D + WN ++ F + + + K+M+ G P +TF+++++ Y+ G +
Sbjct: 450 LSPD--IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC-GSFE 506
Query: 675 EVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDKYK 734
+ ++ M D ++VL RGG + ++ +V++ ME G+ ++
Sbjct: 507 QAMTVYRRMLDAGVTP-----DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELT 561
Query: 735 YRMLFLKY 742
Y L Y
Sbjct: 562 YCSLLHAY 569
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 15/237 (6%)
Query: 490 ISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDS 549
+ G+L +A L D+M G+ + +L+ C R + A+L+ G+ +D
Sbjct: 203 VETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 550 SSYEAMIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGM--LTKSGAETDEATLMTK 606
+Y ++ DTK AL L +M+E I P V + + L K G +D L ++
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 607 LLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGY 666
+L + + V +N +I FC DA++ L+ M +P+ TF+++++
Sbjct: 322 MLE-----KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA- 375
Query: 667 AAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMM 723
+ GK E +L EM + + +S++Y F + F A + +M
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTY-----NSMIYGFCKHNRFDDAKHMFDLM 427
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 19/256 (7%)
Query: 435 HGILQPTETIYVKLVKAFLEANKTKDLA-VFLLKAEREDSPFSNDNSALVHVINSCISLG 493
H + P Y ++ F + N+ D +F L A + F+ +I+
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT-------IIDVYCRAK 446
Query: 494 WLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYE 553
+D+ LL E+ G+ ++ Y +L+ +C+ + L ++ G+ D+ +
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 554 AMIQSRVLQEDTKGALKLFQEMKEAKIP--KVSRQNPGMLTKSGAETDEA-TLMTKL-LH 609
++ E + AL+LF+ ++ +KI V+ G++ DEA L L +H
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 610 EIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAI 669
V+ V +N +I FC K + DA KM+ GH P+ T+++++ G
Sbjct: 567 ------GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG-CLK 619
Query: 670 GGKYLEVTELWGEMKS 685
G+ + EL EM+S
Sbjct: 620 AGEIDKSIELISEMRS 635
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 24/192 (12%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
++N +G A +LL +M ++ +Y++++ C+ +D L + + G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLT---------KSG 595
I + +Y MI A +L ++M E +I NP +LT K G
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI------NPDVLTFNALISASVKEG 380
Query: 596 AETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPN 655
+ L ++LH +V +N++I+ FCK DA K M L SP+
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTV-----TYNSMIYGFCKHNRFDDA----KHMFDLMASPD 431
Query: 656 AQTFHSMVTGYA 667
TF++++ Y
Sbjct: 432 VVTFNTIIDVYC 443
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 41/233 (17%)
Query: 439 QPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQA 498
+P Y ++ + + +K + A L +E F N N+ +IN G +A
Sbjct: 355 KPNVHTYTSMIGGYCKEDKL-NRAEMLFSRMKEQGLFPNVNT-YTTLINGHCKAGSFGRA 412
Query: 499 HDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQS 558
++L++ M G Y + + + C+ +RA + LL A G++ D +Y +IQ
Sbjct: 413 YELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE 472
Query: 559 RVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVD 618
+ Q D AL F M K+G E D
Sbjct: 473 QCKQNDINQALAFFCRMN----------------KTGFEAD------------------- 497
Query: 619 CGVHDWNNV-IHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
NN+ I FC+++ M+++E+ + + SLG P +T+ SM++ Y G
Sbjct: 498 ---MRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG 547
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 15/237 (6%)
Query: 490 ISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDS 549
+ G+L +A L D+M G+ + +L+ C R + A+L+ G+ +D
Sbjct: 203 VETGFL-EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 550 SSYEAMIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGM--LTKSGAETDEATLMTK 606
+Y ++ DTK AL L +M+E I P V + + L K G +D L ++
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 607 LLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGY 666
+L + + V +N +I FC DA++ L+ M +P+ TF+++++
Sbjct: 322 MLE-----KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA- 375
Query: 667 AAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMM 723
+ GK E +L EM + + +S++Y F + F A + +M
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTY-----NSMIYGFCKHNRFDDAKHMFDLM 427
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 19/256 (7%)
Query: 435 HGILQPTETIYVKLVKAFLEANKTKDLA-VFLLKAEREDSPFSNDNSALVHVINSCISLG 493
H + P Y ++ F + N+ D +F L A + F+ +I+
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT-------IIDVYCRAK 446
Query: 494 WLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYE 553
+D+ LL E+ G+ ++ Y +L+ +C+ + L ++ G+ D+ +
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 554 AMIQSRVLQEDTKGALKLFQEMKEAKIP--KVSRQNPGMLTKSGAETDEA-TLMTKL-LH 609
++ E + AL+LF+ ++ +KI V+ G++ DEA L L +H
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 610 EIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAI 669
V+ V +N +I FC K + DA KM+ GH P+ T+++++ G
Sbjct: 567 ------GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK- 619
Query: 670 GGKYLEVTELWGEMKS 685
G+ + EL EM+S
Sbjct: 620 AGEIDKSIELISEMRS 635
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 24/192 (12%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
++N +G A +LL +M ++ +Y++++ C+ +D L + + G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLT---------KSG 595
I + +Y MI A +L ++M E +I NP +LT K G
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI------NPDVLTFNALISASVKEG 380
Query: 596 AETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPN 655
+ L ++LH +V +N++I+ FCK DA K M L SP+
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTV-----TYNSMIYGFCKHNRFDDA----KHMFDLMASPD 431
Query: 656 AQTFHSMVTGYA 667
TF++++ Y
Sbjct: 432 VVTFNTIIDVYC 443
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 112/556 (20%), Positives = 206/556 (37%), Gaps = 129/556 (23%)
Query: 169 LASTILRKMIGMGHFPRVTAWSAVL---ANMSQTADGSYLAAELILEIGYMFQNNRVDPR 225
LA +L KM+ +G+ P + S++L + + +D L +++ E+GY
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV-EMGY---------- 111
Query: 226 KKSNAPLIAMKPNTAAFNIALAGCLLFDTSRKAEQLLDMMPRIGVKADSNLLVTMARIYE 285
+P+T F + G L + + +A L+D M + G +
Sbjct: 112 ----------RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ-------------- 147
Query: 286 RNGRREELKKLQRHIEDAPNLTDIQFRQFYNCLLTCHLKFGDLDSASNMVLEMLGKAKQA 345
PNL Y ++ K GD+D A N+ L + AK
Sbjct: 148 ------------------PNLVT------YGVVVNGLCKRGDIDLAFNL-LNKMEAAKIE 182
Query: 346 RNSLAAAKFINGAAKLDHNYFPGPASVHSLSNSEVMGSLENNQPIRSAFSSYEEFLKDRN 405
+ + I+ K H +++ E G IR +Y +
Sbjct: 183 ADVVIFNTIIDSLCKYRHV----DDALNLFKEMETKG-------IRPNVVTYSSLISCLC 231
Query: 406 FLQLEAESNAVLGSLLAKLQKHVDLITTKHGILQPTETIYVKLVKAFLEANK---TKDLA 462
++++ +L ++ K + P + L+ AF++ K + L
Sbjct: 232 SYGRWSDASQLLSDMIEKK-------------INPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 463 VFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLK 522
++K + F+ ++ +IN LD+A + + M Y +L+K
Sbjct: 279 DDMIKRSIDPDIFTYNS-----LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 523 AYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPK 582
+C++ R D L R+ G+ D+ +Y +IQ D A K+F++M +P
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 583 V---------SRQNPGMLTKSGAETD---------EATLMTKLLHEIKEGQSVDCG---- 620
N G L K+ D + + T ++ + + VD G
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 621 -----------VHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAI 669
V +N +I C KRL+Q+A LKKM+ G P++ T+++++ +
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRD 513
Query: 670 GGKYLEVTELWGEMKS 685
G K EL EM+S
Sbjct: 514 GDKAAS-AELIREMRS 528
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 12/253 (4%)
Query: 501 LLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRV 560
LL +M G +SLL YC R +D +L+ + G + D+ ++ +I
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 561 LQEDTKGALKLFQEMKEAKI-PKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVDC 619
L A+ L M + P + G++ + + L LL+++ E ++
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTY--GVVVNGLCKRGDIDLAFNLLNKM-EAAKIEA 183
Query: 620 GVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTEL 679
V +N +I CK R + DA K+M + G PN T+ S+++ + G++ + ++L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY-GRWSDASQL 242
Query: 680 WGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDKYKYRMLF 739
+M + F+ L+D+ FV+ G F A ++ M K + D + Y L
Sbjct: 243 LSDMIEKKINPNLVTFNA-LIDA----FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 740 LKY--HKTLYKGK 750
+ H L K K
Sbjct: 298 NGFCMHDRLDKAK 310
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 124/303 (40%), Gaps = 22/303 (7%)
Query: 439 QPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQA 498
QP Y +V + DLA LL + E + D +I+S +D A
Sbjct: 147 QPNLVTYGVVVNGLCKRGDI-DLAFNLLN-KMEAAKIEADVVIFNTIIDSLCKYRHVDDA 204
Query: 499 HDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQS 558
+L EM G+R Y+SL+ C R +D + LL D + I + ++ A+I +
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 559 RVLQEDTKGALKLFQEMKEAKI-PKVSRQNP---GMLTKSGAETDEATLMTKLLHEIKEG 614
V + A KL +M + I P + N G D+A M + +
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHD--RLDKAKQMFEFM------ 316
Query: 615 QSVDC--GVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGK 672
S DC + +N +I FCK + ++D + ++M G + T+ +++ G G
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH-DGD 375
Query: 673 YLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDK 732
+++ +M S M + LLD + G +A EV M+K ++ +D
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTY-SILLDGL----CNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 733 YKY 735
Y Y
Sbjct: 431 YIY 433
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 137/318 (43%), Gaps = 32/318 (10%)
Query: 439 QPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQA 498
+P+ Y LV A L + K E+ D +IN+ G LDQA
Sbjct: 351 KPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG--LKPDTILFNAIINASSESGNLDQA 408
Query: 499 HDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDA-RKAGIQLDSSSYEAMIQ 557
+ ++M+ +G + +S + +L+K Y + + + + LL R +Q + + ++Q
Sbjct: 409 MKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQ 468
Query: 558 SRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGMLTKSGAE-----TDEATLMTKLLHEI 611
+ Q + A + +M+ + P V N L K+ A T E ++ ++LH
Sbjct: 469 AWCNQRKIEEAWNIVYKMQSYGVKPDVVTFN--TLAKAYARIGSTCTAEDMIIPRMLHNK 526
Query: 612 KEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIG- 670
+ CG +++ +C++ M++A + +M+ LG PN F+S++ G+ I
Sbjct: 527 VKPNVRTCGT-----IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 671 ----GKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKG 726
G+ +++ E +G +K D +++ + G R E+ + M +G
Sbjct: 582 MDGVGEVVDLMEEFG-----------VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEG 630
Query: 727 KMFIDKYKYRMLFLKYHK 744
+ D + + +L Y +
Sbjct: 631 GIDPDIHAFSILAKGYAR 648
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 3/194 (1%)
Query: 478 DNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLL 537
D + ++N I G +AH + + + G + Y +L+ A + + SL+
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 538 RDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGMLTKSGA 596
K G++ D+ + A+I + + A+K+F++MKE+ P S N L K
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFN--TLIKGYG 435
Query: 597 ETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNA 656
+ + ++LL + + + N ++ +C +R +++A + KM+S G P+
Sbjct: 436 KIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 657 QTFHSMVTGYAAIG 670
TF+++ YA IG
Sbjct: 496 VTFNTLAKAYARIG 509
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 7/203 (3%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
+ C G + LLDEM G++ +Y + C+ N+ + + +K G
Sbjct: 205 LFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHG 264
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAK-IPKVSRQNPGMLTKSGAETDE-AT 602
+ + +Y AMI + + A L++E+ A+ +P V G L + E T
Sbjct: 265 VLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVF--GTLVDGFCKARELVT 322
Query: 603 LMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSM 662
+ +H +K G VD ++ +N +IH CK M +A L +M SL SP+ T+ +
Sbjct: 323 ARSLFVHMVKFG--VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTIL 380
Query: 663 VTGYAAIGGKYLEVTELWGEMKS 685
+ G I + E L+ +MK+
Sbjct: 381 ING-LCIEDQVAEANRLFQKMKN 402
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 168/443 (37%), Gaps = 52/443 (11%)
Query: 234 AMKPNTAAFNIALAGCLLFDTSRKAEQLLDMMPRIGVKADSNLLVTMARIYERNGRREEL 293
+ P+ + + C K E+LLD M +G+K + + R+ + EE
Sbjct: 194 GLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA 253
Query: 294 KKLQRHIED---APNLTDIQFRQFYNCLLTCHLKFGDLDSASNMVLEMLGKAKQARNSLA 350
+K+ ++ PNL Y+ ++ + K G++ A + E+L A+ N +
Sbjct: 254 EKMFELMKKHGVLPNLYT------YSAMIDGYCKTGNVRQAYGLYKEIL-VAELLPNVVV 306
Query: 351 AAKFINGAAKLDHNYFPGPASVHSLSNSEVMGSLENNQPIRSAFSSYEEFLKDRNFLQLE 410
++G K E++ + RS F +F D N
Sbjct: 307 FGTLVDGFCK----------------ARELVTA-------RSLFVHMVKFGVDPNLYVYN 343
Query: 411 AESNAVLGSLLAKLQKHVDLITTKHGI-LQPTETIYVKLVKAFLEANKTKDLAVFLLKAE 469
+ S + + V L++ + L P Y L+ ++ + K +
Sbjct: 344 CLIHGHCKS--GNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMK 401
Query: 470 REDS-PFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQAN 528
E P S ++L+H C ++QA DL EM +GV +++L+ YC
Sbjct: 402 NERIFPSSATYNSLIH--GYCKEYN-MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVR 458
Query: 529 RAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNP 588
L + GI D +Y A+I + + + K AL+L+ +M EA I +
Sbjct: 459 DIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP-NDHTF 517
Query: 589 GMLTKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNV-----IHFFCKKRLMQDAEKA 643
L + ++ E + +S WN+V I C+ + A +
Sbjct: 518 ACLVDGFWKEGRLSVAIDFYQENNQQRSC------WNHVGFTCLIEGLCQNGYILRASRF 571
Query: 644 LKKMRSLGHSPNAQTFHSMVTGY 666
MRS G +P+ ++ SM+ G+
Sbjct: 572 FSDMRSCGITPDICSYVSMLKGH 594
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 16/266 (6%)
Query: 420 LLAKLQKHVDLITTKHGILQPTETIYVKLVKAFLEANKTKDL-AVFLLKAEREDSPFSND 478
L +K +K +D +T+ GI +P IY + NK ++ +F L + P
Sbjct: 214 LYSKKEKLLDEMTSL-GI-KPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYT 271
Query: 479 NSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLR 538
SA+ I+ G + QA+ L E+ +A + V+ +L+ +C+A SL
Sbjct: 272 YSAM---IDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFV 328
Query: 539 DARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGMLTKSGAE 597
K G+ + Y +I + A+ L EM+ + P V +L
Sbjct: 329 HMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYT--ILINGLCI 386
Query: 598 TDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQ 657
D+ +L ++K + + +N++IH +CK+ M+ A +M + G PN
Sbjct: 387 EDQVAEANRLFQKMK-NERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNII 445
Query: 658 TFHSMVTGYA------AIGGKYLEVT 677
TF +++ GY A G Y E+T
Sbjct: 446 TFSTLIDGYCNVRDIKAAMGLYFEMT 471
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 114/281 (40%), Gaps = 41/281 (14%)
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
+P E ++ L+ A + KD A E F + ++ +G + +
Sbjct: 214 FEPDEYVFGCLLDALCKHGSVKDAAKLF---EDMRMRFPVNLRYFTSLLYGWCRVGKMME 270
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A +L +M AG Y +LL Y A + AD LLRD R+ G + +++ Y +IQ
Sbjct: 271 AKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQ 330
Query: 558 SRVLQEDTKGALKLFQEMK----EAKIPKVSRQNPGM---------------LTKSGAET 598
+ + + A+K+F EM+ EA + + G + K G
Sbjct: 331 ALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMP 390
Query: 599 DEATLMTKLL-HEIKEG---------------QSVDCGVHDWNNVIHFFCKKRLMQDAEK 642
E T M ++ HE KE D G++ N VI CK +++A +
Sbjct: 391 SELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIY--NVVIRLACKLGEVKEAVR 448
Query: 643 ALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEM 683
+M G SP TF M+ G A+ G LE ++ + EM
Sbjct: 449 LWNEMEENGLSPGVDTFVIMINGLAS-QGCLLEASDHFKEM 488
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 107/234 (45%), Gaps = 23/234 (9%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
V+N G +D A +LL++M A + +Y++++ + C+ D +L + G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSG---AETDEA 601
++ + +Y ++I E A +L +M E KI NP ++T + A E
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI------NPNVVTFNALIDAFVKEG 344
Query: 602 TLM--TKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTF 659
L+ KL E+ + +S+D + ++++I+ FC + +A+ + M S PN T+
Sbjct: 345 KLVEAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 660 HSMVTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFF 713
++++ G+ + E EL+ EM ++V YT + GFF
Sbjct: 404 NTLINGFCK-AKRIDEGVELFREMSQRGLVG----------NTVTYTTLIHGFF 446
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 97/242 (40%), Gaps = 14/242 (5%)
Query: 501 LLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRV 560
LL +M G +SLL YC R +D +L+ + G + D+ ++ +I
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 561 LQEDTKGALKLFQEMKEAKI-PKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVDC 619
L A+ L M + P + G++ + + L LL+++ E ++
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTY--GVVVNGLCKRGDIDLAFNLLNKM-EAAKIEA 258
Query: 620 GVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTEL 679
V ++ VI CK R DA +M + G PN T+ S+++ L E
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS--------CLCNYER 310
Query: 680 WGEMKSLAXXXXXMKFDQELL--DSVLYTFVRGGFFTRANEVVSMMEKGKMFIDKYKYRM 737
W + L K + ++ ++++ FV+ G A ++ M K + D + Y
Sbjct: 311 WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 370
Query: 738 LF 739
L
Sbjct: 371 LI 372
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 125/306 (40%), Gaps = 22/306 (7%)
Query: 439 QPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQA 498
QP Y ++ + + DLA+ LL + E D VI+S +D A
Sbjct: 202 QPDLVTYGAVINGLCKRGE-PDLALNLLN-KMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 499 HDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQS 558
+L EM G+R Y+SL+ C R +D + LL D + I + ++ ++I +
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 559 RVLQEDTKGALKLFQEMKEAKI-PKVSRQNP---GMLTKSGAETDEATLMTKLLHEIKEG 614
+ A KLF EM + I P + N G DEA + L+
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD--RLDEAQQIFTLM------ 371
Query: 615 QSVDC--GVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGK 672
S DC V +N +I+ FCK + + D + + M G N T+ +++ G+
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ-ASD 430
Query: 673 YLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDK 732
++ +M S M ++ LLD + + G +A V ++K KM D
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNT-LLDGL----CKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 733 YKYRML 738
Y Y ++
Sbjct: 486 YTYNIM 491
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 9/192 (4%)
Query: 495 LDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEA 554
+ +A L+D+M G + + + +L+ Q N+A++ +L+ G Q D +Y A
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 555 MIQSRVLQEDTKGALKLFQEMKEAKIPK---VSRQNPGMLTKSGAETDEATLMTKLLHEI 611
+I + + AL L +M++ KI + L K D L T++
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM---- 266
Query: 612 KEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGG 671
+ + + V ++++I C DA + L M +PN TF+S++ +A G
Sbjct: 267 -DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK-EG 324
Query: 672 KYLEVTELWGEM 683
K +E +L+ EM
Sbjct: 325 KLIEAEKLFDEM 336
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 8/189 (4%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
++N +S ++D A + + M ++ Y +++K YC+A + LRD G
Sbjct: 228 LMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRG 287
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKI---PKVSRQNPGMLTKSGAETDEA 601
+ D +Y MIQ+ D + L+QEM E I P G L K G +
Sbjct: 288 HEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGY 347
Query: 602 TLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHS 661
T+ + I++G + ++ +I + K ++DA + L +M G P+ T+
Sbjct: 348 TVFENM---IRKGSKPNVAIY--TVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSV 402
Query: 662 MVTGYAAIG 670
+V G G
Sbjct: 403 VVNGLCKNG 411
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 439 QPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQA 498
+P IY L+ + ++ +D A+ LL D F D V+N G +++A
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVED-AIRLLH-RMIDEGFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 499 HDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQS 558
D R G+ S Y+SL+ +A R + L + + G DS Y A+I +
Sbjct: 417 LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDA 476
Query: 559 RVLQEDTKGALKLFQEMKE 577
A+ LF+ M+E
Sbjct: 477 FTKHRKVDEAIALFKRMEE 495
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 30/192 (15%)
Query: 480 SALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRD 539
S LVH + L++A D EM +G++ +V+ SL+ A+C+ANR +V +L++
Sbjct: 311 SVLVHTYGT---ENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKE 367
Query: 540 ARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETD 599
+ G+ +S S +++ + + + A +F++M + P + D
Sbjct: 368 MKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEP---------------DAD 412
Query: 600 EATLMTKLLHEIKEGQSVD------------CGVHDWNNVIHFFCKKRLMQDAEKALKKM 647
T++ K+ E KE ++ D +H ++ +I+ C++R Q A L++M
Sbjct: 413 TYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEM 472
Query: 648 RSLGHSPNAQTF 659
+G P+ TF
Sbjct: 473 IEMGIRPSGVTF 484
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 12/190 (6%)
Query: 484 HVINSCISL----GWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRD 539
++ + CI + G +++A L D M +G+ + YASL++ YC+ LL +
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407
Query: 540 ARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLT---KSGA 596
+K I + +Y +++ D GA + +EM I R N + T K+
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM----IASGCRPNVVIYTTLIKTFL 463
Query: 597 ETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNA 656
+ ++L E+KE Q + + +N++I K + M +A L +M G PNA
Sbjct: 464 QNSRFGDAMRVLKEMKE-QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522
Query: 657 QTFHSMVTGY 666
T+ + ++GY
Sbjct: 523 FTYGAFISGY 532
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 108/234 (46%), Gaps = 11/234 (4%)
Query: 493 GWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSY 552
G +++A +LLDEM + G+ + Y +++ YC++ A+ L + + G+ DS Y
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 553 EAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIK 612
++ D + A+ +F K+ + N L + + L T++L+ +
Sbjct: 736 TTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNA--LINWVFKFGKTELKTEVLNRLM 793
Query: 613 EGQSVDCGVHD---WNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAI 669
+G G + +N +I + CK+ ++ A++ +M++ P T+ S++ GY +
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 670 GGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMM 723
G+ E+ ++ E ++ D + ++ F++ G T+A +V M
Sbjct: 854 -GRRAEMFPVFDE-----AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 115/284 (40%), Gaps = 46/284 (16%)
Query: 439 QPTETIYVKLVKAFLEANKTKD----------------------LAVFLLKAEREDSPFS 476
+P IY L+K FL+ ++ D L + L KA+R D
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA-- 506
Query: 477 NDNSALVHVINSCIS----------LGWLD-----QAHDLLDEMRLAGVRTGSSVYASLL 521
S LV ++ + + G+++ A + EMR GV + L+
Sbjct: 507 --RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 522 KAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKI- 580
YC+ + + S R GI D+ +Y ++ + A ++F+EM+ I
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 581 PKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDA 640
P V G+L ++ + + E+ E + + V +N ++ FC+ ++ A
Sbjct: 625 PDVFSY--GVLINGFSKLGNMQKASSIFDEMVE-EGLTPNVIIYNMLLGGFCRSGEIEKA 681
Query: 641 EKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEMK 684
++ L +M G PNA T+ +++ GY G E L+ EMK
Sbjct: 682 KELLDEMSVKGLHPNAVTYCTIIDGYCK-SGDLAEAFRLFDEMK 724
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 114/255 (44%), Gaps = 10/255 (3%)
Query: 431 ITTKHGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCI 490
+ T +GI+ P Y L+ + + LA+ +L R N S + V C
Sbjct: 379 MVTSYGIV-PDVCTYNSLIYGYWKEGLVG-LALEVLHDMRNKGCKPNVYSYTILVDGFC- 435
Query: 491 SLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSS 550
LG +D+A+++L+EM G++ + + L+ A+C+ +R + + R+ + G + D
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 551 SYEAMIQSRVLQEDTKGALKLFQEM-KEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLH 609
++ ++I ++ K AL L ++M E + N L + E KL++
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN--TLINAFLRRGEIKEARKLVN 553
Query: 610 E-IKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAA 668
E + +G +D +N++I C+ + A +KM GH+P+ + + ++ G
Sbjct: 554 EMVFQGSPLD--EITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCR 611
Query: 669 IGGKYLEVTELWGEM 683
G E E EM
Sbjct: 612 -SGMVEEAVEFQKEM 625
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 17/248 (6%)
Query: 496 DQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVAS--LLRDARKAGIQLDSSSYE 553
D LL EM G+ Y L+ AY + + +D+A+ LR +K G++ S SY
Sbjct: 431 DIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLR-MKKVGLKPSSHSYT 489
Query: 554 AMIQSRVLQEDTKGALKLFQEM-KEAKIPKVSRQNPGM--LTKSGAETDEATLMTKLLHE 610
A+I + + + A F+EM KE P V + +SG + +L E
Sbjct: 490 ALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLRE 549
Query: 611 IKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
+G + +N ++ F K+ L +A + + +G P+ T++ ++ YA G
Sbjct: 550 KIKGTRIT-----YNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYAR-G 603
Query: 671 GKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFI 730
G+ ++ +L EM +L +K D +++Y FVR F RA MM K
Sbjct: 604 GQDAKLPQLLKEMAAL-----NLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVP 658
Query: 731 DKYKYRML 738
D Y L
Sbjct: 659 DPRSYEKL 666
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 128/294 (43%), Gaps = 16/294 (5%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
++ S G ++A + EM G+R+ + VY +L+ AY ++N +V L + R G
Sbjct: 350 LVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKG 409
Query: 545 IQLDSSSYEAMIQS--RVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEAT 602
++ +++Y ++ + R +Q D L +EM++ + + +++ G +
Sbjct: 410 LKPSAATYNILMDAYARRMQPDI--VETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSD 467
Query: 603 LMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSM 662
+ +K+ + H + +IH + + A + ++M G P+ +T+ S+
Sbjct: 468 MAADAFLRMKK-VGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSV 526
Query: 663 VTGYAAIG--GKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVV 720
+ + G GK +E+ +L K +K + +++L F + G + A +VV
Sbjct: 527 LDAFRRSGDTGKLMEIWKLMLREK--------IKGTRITYNTLLDGFAKQGLYIEARDVV 578
Query: 721 SMMEKGKMFIDKYKYRMLFLKYHKTLYKGKAPKFQTE-SQLNKREAAIAFKRWI 773
S K + Y ML Y + K P+ E + LN + +I + I
Sbjct: 579 SEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMI 632
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 103/246 (41%), Gaps = 8/246 (3%)
Query: 434 KHGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLG 493
+ GI P Y L+ +++K+ AV L + S D +IN G
Sbjct: 224 RSGISYPNSITYSTLMDCLFAHSRSKE-AVELFEDMISKEGISPDPVTFNVMINGFCRAG 282
Query: 494 WLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYE 553
+++A +LD M+ G Y++L+ +C+ + + + +K G++LD+ Y
Sbjct: 283 EVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYT 342
Query: 554 AMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKE 613
++ +T A+KL EMK ++ + +L +E + L E
Sbjct: 343 TLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSE 402
Query: 614 GQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMV-----TGYAA 668
G ++ G + +++ C ++ A K L M G P+ T++ +V +GY
Sbjct: 403 GVHLNKG--SYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTE 460
Query: 669 IGGKYL 674
IG + L
Sbjct: 461 IGVRVL 466
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 2/193 (1%)
Query: 478 DNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLL 537
D +I+S +++A DL D + GV +Y +L+ YC+A + + +L
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLML 555
Query: 538 RDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAE 597
+S ++ A+I K A L ++M + + + ++ + +
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Query: 598 TDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQ 657
D ++ + G D H + I +C++ + DAE + KMR G SP+
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPD--AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Query: 658 TFHSMVTGYAAIG 670
T+ S++ GY +G
Sbjct: 674 TYSSLIKGYGDLG 686
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 175/418 (41%), Gaps = 59/418 (14%)
Query: 315 YNCLLTCHLKFGDLDSASNMVLEMLGKAKQARNSLAAAKFINGAAKL----DHNYFPGPA 370
YN LL +FG +D + +EML + K N K +NG KL + N +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEML-EDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 371 SVHSLS------NSEVMGSLENNQPIRSAFSSYEEF-LKD--RNFLQLEAESNAVLGSLL 421
L S +MG + + + SAF + E LK RN + A ++ + G +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQ-RKDLDSAFKVFNEMPLKGCRRNEV---AYTHLIHGLCV 300
Query: 422 A-KLQKHVDL-ITTKHGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDN 479
A ++ + +DL + K PT Y L+K+ L ++ K A+ L+K E E++ +
Sbjct: 301 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKS-LCGSERKSEALNLVK-EMEETGIKPNI 358
Query: 480 SALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRD 539
+I+S S ++A +LL +M G+ Y +L+ YC+ D ++
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 540 ARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNP---------- 588
+ ++ +Y +I+ + + A+ + +M E K+ P V N
Sbjct: 419 MESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 589 --------GMLTKSGAETDEATLMTKLLHEIKEGQSVD--CGVHD-------------WN 625
++ G D+ T T ++ + + + V+ C + D +
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTY-TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 626 NVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEM 683
+I +CK + +A L+KM S PN+ TF++++ G A GK E T L +M
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA-DGKLKEATLLEEKM 593
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 104/267 (38%), Gaps = 20/267 (7%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
++NS G +D+ + EM V Y ++ YC+ + + +AG
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTK------SGAET 598
+ D +Y ++I ++D A K+F EM K R+N T
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMP----LKGCRRNEVAYTHLIHGLCVARRI 304
Query: 599 DEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQT 658
DEA L ++K+ + V + +I C +A +K+M G PN T
Sbjct: 305 DEA---MDLFVKMKDDECFP-TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 360
Query: 659 FHSMVTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANE 718
+ ++ + K+ + EL G+M + + ++++ + + G A +
Sbjct: 361 YTVLIDSLCS-QCKFEKARELLGQMLEKGLMPNVITY-----NALINGYCKRGMIEDAVD 414
Query: 719 VVSMMEKGKMFIDKYKYRMLFLKYHKT 745
VV +ME K+ + Y L Y K+
Sbjct: 415 VVELMESRKLSPNTRTYNELIKGYCKS 441
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 103/234 (44%), Gaps = 23/234 (9%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
V+N G +D A LL +M + G +Y +++ A C D +L + G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSG---AETDEA 601
I+ + +Y ++I+ A +L +M E KI NP ++T S A E
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI------NPNVVTFSALIDAFVKEG 340
Query: 602 TLM--TKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTF 659
L+ KL E+ + +S+D + ++++I+ FC + +A+ + M S PN T+
Sbjct: 341 KLVEAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 660 HSMVTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFF 713
++++ G+ + E EL+ EM ++V YT + GFF
Sbjct: 400 NTLIKGFCK-AKRVDEGMELFREMSQRGLVG----------NTVTYTTLIHGFF 442
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 124/299 (41%), Gaps = 10/299 (3%)
Query: 440 PTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAH 499
P+ + KL+ A + NK DL V L + ++ S++ +IN L A
Sbjct: 79 PSIVEFSKLLSAIAKMNKF-DL-VISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLAL 136
Query: 500 DLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSR 559
+L +M G SLL +C NR +D SL+ + G Q DS ++ +I
Sbjct: 137 AVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGL 196
Query: 560 VLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVDC 619
A+ L M K + G++ + + L LL ++++G+ ++
Sbjct: 197 FRHNRASEAVALVDRMV-VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK-IEP 254
Query: 620 GVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTEL 679
GV +N +I C + + DA +M + G PN T++S++ G++ + + L
Sbjct: 255 GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY-GRWSDASRL 313
Query: 680 WGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDKYKYRML 738
+M + F L+D+ FV+ G A ++ M K + D + Y L
Sbjct: 314 LSDMIERKINPNVVTF-SALIDA----FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 123/623 (19%), Positives = 240/623 (38%), Gaps = 120/623 (19%)
Query: 75 DPAKVSLEIENAIDENQLDYSWKLFEQHMHMDGFPRKSVFNKLVTSYVESLDTQWLRKAY 134
D K+S+ N +++ +LD + LF + FP F+KL+++ +
Sbjct: 48 DYRKISI---NRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAK---MNKFDLVI 101
Query: 135 ELEERAIEEG-KHDLLEKEVLIYLSLGLAKAGLPVLASTILRKMIGMGHFPRVTAWSAVL 193
L E+ G H+L +LI + LA +L KM+ +G+ P + +++L
Sbjct: 102 SLGEQMQNLGISHNLYTYSILINC---FCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLL 158
Query: 194 ---ANMSQTADGSYLAAELILEIGYMFQNNRVDPRKKSNAPLIAMKPNTAAFNIALAGCL 250
+ ++ +D L +++ E+GY +P++ FN + G
Sbjct: 159 NGFCHGNRISDAVSLVGQMV-EMGY--------------------QPDSFTFNTLIHGLF 197
Query: 251 LFDTSRKAEQLLDMMPRIGVKADSNLLVTMARIYERNGRREELKKLQRHIEDAPNLTDIQ 310
+ + +A L+D M G + D LVT
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPD---LVT------------------------------- 223
Query: 311 FRQFYNCLLTCHLKFGDLDSASNMVLEMLGKAKQARNSLAAAKFINGAAKLDHNYFPGPA 370
Y ++ K GD+D A L +L K +Q + I + +
Sbjct: 224 ----YGIVVNGLCKRGDIDLA----LSLLKKMEQGK--------IEPGVVIYNTIIDALC 267
Query: 371 SVHSLSNSEVMGSLENNQPIRSAFSSYEEFLKDRNFLQLEAESNAVLGSLLAKLQKHVDL 430
+ +++++ + + +N+ IR +Y + R S+A LL+ D+
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLI--RCLCNYGRWSDA--SRLLS------DM 317
Query: 431 ITTKHGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAER---EDSPFSNDNSALVH--V 485
I K + P + L+ AF++ K L++AE+ E S D + +
Sbjct: 318 IERK---INPNVVTFSALIDAFVKEGK-------LVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 486 INSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGI 545
IN LD+A + + M Y +L+K +C+A R + L R+ + G+
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 546 QLDSSSYEAMIQSRVLQEDTKGALKLFQEM-KEAKIPKVSRQN---PGMLTKSGAETDEA 601
++ +Y +I + A +F++M + +P + + G+ ET
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET--- 484
Query: 602 TLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHS 661
++ E + ++ ++ +N +I CK ++D + G PN T+ +
Sbjct: 485 ---ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 662 MVTGYAAIGGKYLEVTELWGEMK 684
M++G+ G K E L+ EMK
Sbjct: 542 MMSGFCRKGLKE-EADALFREMK 563
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 104/237 (43%), Gaps = 12/237 (5%)
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
L P Y ++ + +T + + +P S S ++ I +C G +
Sbjct: 404 LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTIL--IGACSRFGSISD 461
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A + M+ G++ Y +L+ Y + ++ V L+ + R AGI D ++Y +I
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 558 SRVLQEDTKGALKLFQEM-KEAKIPKV--SRQNPGMLTKSGAETDEATLMTKLLHEIK-E 613
S V++ A ++ E+ + +P G +K G + EA ++ + +++ +
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRG-DFQEAFILWFYMADLRMK 580
Query: 614 GQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
V C + ++H +CK + M+ A K+ G P+ +++++ GY ++G
Sbjct: 581 PDVVTC-----SALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 104/237 (43%), Gaps = 12/237 (5%)
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
L P Y ++ + +T + + +P S S ++ I +C G +
Sbjct: 404 LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTIL--IGACSRFGSISD 461
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A + M+ G++ Y +L+ Y + ++ V L+ + R AGI D ++Y +I
Sbjct: 462 AESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIH 521
Query: 558 SRVLQEDTKGALKLFQEM-KEAKIPKV--SRQNPGMLTKSGAETDEATLMTKLLHEIK-E 613
S V++ A ++ E+ + +P G +K G + EA ++ + +++ +
Sbjct: 522 SMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRG-DFQEAFILWFYMADLRMK 580
Query: 614 GQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
V C + ++H +CK + M+ A K+ G P+ +++++ GY ++G
Sbjct: 581 PDVVTC-----SALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 95/216 (43%), Gaps = 38/216 (17%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
++ ++ G ++ A +L+EM G ++ Y L+ YC+ R ++ A+++ D K
Sbjct: 232 ILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNE 291
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLM 604
I+ + +Y MI++ ++ + A +F EM E +++L
Sbjct: 292 IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSF-----------------MPDSSLC 334
Query: 605 TKLLHEIKEGQSVD--CGVHDW-----NN----------VIHFFCKKRLMQDAEKALKKM 647
K++ + E VD CG+ W NN +IH+ CK+ + +A K +
Sbjct: 335 CKVIDALCEDHKVDEACGL--WRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF 392
Query: 648 RSLGHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEM 683
G P+ T+++++ G G+ E LW +M
Sbjct: 393 EK-GSIPSLLTYNTLIAGMCE-KGELTEAGRLWDDM 426
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 16/234 (6%)
Query: 439 QPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQA 498
QP Y +V + T DLA+ LL + E + + VI+S D A
Sbjct: 215 QPDLVTYGAVVNGLCKRGDT-DLALNLLN-KMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
Query: 499 HDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQS 558
+L EM GVR Y+SL+ C R +D + LL D + I + ++ A+I +
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 332
Query: 559 RVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSV- 617
V + A KL++EM + I +P + T S M L E K+ +
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSI------DPNIFTYS--SLINGFCMLDRLGEAKQMLELM 384
Query: 618 ---DC--GVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGY 666
DC V +N +I+ FCK + + + ++M G N T+ +++ G+
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 9/192 (4%)
Query: 495 LDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEA 554
+ A L+D+M G + + + +L+ N+A++ +L+ + G Q D +Y A
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 555 MIQSRVLQEDTKGALKLFQEMKEAKIPK---VSRQNPGMLTKSGAETDEATLMTKLLHEI 611
++ + DT AL L +M+ AKI + L K E D L T++
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM---- 279
Query: 612 KEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGG 671
E + V V ++++I C DA + L M +PN TF +++ + G
Sbjct: 280 -ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVK-KG 337
Query: 672 KYLEVTELWGEM 683
K ++ +L+ EM
Sbjct: 338 KLVKAEKLYEEM 349
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 4/177 (2%)
Query: 495 LDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEA 554
L +A+++LD M + SL+K YC R D + R+ K G+ ++ +Y
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 555 MIQSRVLQEDTKGALKLFQEM-KEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKE 613
++Q K A +LFQEM +P V G+L + + ++ ++++
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDV--MTYGILLDGLCDNGKLEKALEIFEDLQK 466
Query: 614 GQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
+ +D G+ + +I CK ++DA + G PN T+ M++G G
Sbjct: 467 SK-MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKG 522
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 124/294 (42%), Gaps = 18/294 (6%)
Query: 439 QPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQA 498
QP Y +V + T LA+ LL+ + E+ D +I+S G +D A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTS-LALDLLR-KMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 499 HDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQS 558
L EM G+++ Y SL++ C+A + D A LL+D I + ++ ++
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 559 RVLQEDTKGALKLFQEMKEAKI-PKVSRQNP---GMLTKSGAETDEATLMTKLLHEIKEG 614
V + + A +L++EM I P + N G ++ EA M L+ ++
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN--RLSEANNMLDLM--VRNK 363
Query: 615 QSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYL 674
S D + + ++I +C + + D K + + G NA T+ +V G+ GK
Sbjct: 364 CSPD--IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ-SGKIK 420
Query: 675 EVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKM 728
EL+ EM S M + LLD G +A E+ ++K KM
Sbjct: 421 LAEELFQEMVSHGVLPDVMTYGI-LLDG----LCDNGKLEKALEIFEDLQKSKM 469
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 8/178 (4%)
Query: 493 GWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSY 552
G + +A L+D M G + Y S++ C++ + LLR + ++ D +Y
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 553 EAMIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGM--LTKSGAETDEATLMTKLLH 609
+I S A+ LF+EM+ I V N + L K+G D A L+ ++
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Query: 610 EIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYA 667
+ + V +N ++ F K+ +Q+A + K+M + G SPN T+++++ GY
Sbjct: 292 -----REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 127/648 (19%), Positives = 247/648 (38%), Gaps = 99/648 (15%)
Query: 57 LQGLYFSSMAERILVQAQDPAKVSLEIENAIDENQLDYSWKLFEQHMHMDGFPRKSVFNK 116
L+G+YFS+ + + + L++++A+D LF + + P FNK
Sbjct: 35 LRGVYFSAASYDYREKLSRNVLLDLKLDDAVD---------LFGEMVQSRPLPSIVEFNK 85
Query: 117 LVTSYVESLDTQWLRKAYELEERAIE-EGKHDLLEKEVLIYLSLGLAKAGLPVLASTILR 175
L+++ + L ER +DL +LI + ++ LP LA +L
Sbjct: 86 LLSAIAK---MNKFDLVISLGERMQNLRISYDLYSYNILI--NCFCRRSQLP-LALAVLG 139
Query: 176 KMIGMGHFPRVTAWSAVLANMSQTADGSYLAAELILEIGYMFQNNRVDPRKKSNAPLIAM 235
KM+ +G+ P + S++L S E + + MF ++
Sbjct: 140 KMMKLGYEPDIVTLSSLLNGYCHGKRIS----EAVALVDQMF--------------VMEY 181
Query: 236 KPNTAAFNIALAGCLLFDTSRKAEQLLDMMPRIGVKADSNLLVTMARIYERNGRREELKK 295
+PNT FN + G L + + +A L+D M G + D T+ + G +
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 296 LQRHIEDAPNLTDIQFRQFYNCLLTCHLKFGDLDSASNMVLEMLGKAKQAR----NSLAA 351
L + +E D+ Y ++ + +++ A N+ EM K + NSL
Sbjct: 242 LLKKMEKGKIEADV---VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 352 AKFING----AAKLDHNYFPGPASVHSLSNSEVMGSLENNQPIRSAFSSYEEFLK---DR 404
G A++L + + + ++ S ++ + + A Y+E +K D
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 405 NFLQLEAESNA-VLGSLLAKLQKHVDLITTKHGILQPTETIYVKLVKAFLEANKTKDLAV 463
+ + N + L + + +L+ +K P Y L+K F +A +
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF--PNVVTYNTLIKGFCKAKR------ 410
Query: 464 FLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKA 523
+++ +L EM G+ + Y +L++
Sbjct: 411 -------------------------------VEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 524 YCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKI-PK 582
QA + + G+ D +Y ++ + AL +F+ ++++K+ P
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 583 VSRQN---PGMLTKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQD 639
+ N GM K+G D L L + V V + +I FC+K L ++
Sbjct: 500 IYTYNIMIEGM-CKAGKVEDGWDLFCSL-----SLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 640 AEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEMKSLA 687
A+ ++M+ G PN+ T+++++ G K EL EM+S
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS-AELIKEMRSCG 600
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 30/210 (14%)
Query: 471 EDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRA 530
+D S+ NS +++S LG++D A LLDEM + G++ + SLL Y +
Sbjct: 151 KDRNLSSWNS----ILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLS 206
Query: 531 ADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGM 590
D ++L+ + AG++ +SS +++Q+ G LKL + + G
Sbjct: 207 KDAIAVLKRMQIAGLKPSTSSISSLLQAVA----EPGHLKLGKAIH------------GY 250
Query: 591 LTKSGAETDEATLMTKLLHEIKEG---------QSVDC-GVHDWNNVIHFFCKKRLMQDA 640
+ ++ D T + IK G +D + WN+++ L++DA
Sbjct: 251 ILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDA 310
Query: 641 EKALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
E + +M G P+A T++S+ +GYA +G
Sbjct: 311 EALMIRMEKEGIKPDAITWNSLASGYATLG 340
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 122/571 (21%), Positives = 211/571 (36%), Gaps = 155/571 (27%)
Query: 233 IAMKPNTAAFNIALAGCLLFDTS---RKAEQLLDMMPRIGVKADSNLLVTMARIYERNGR 289
+ +KPN N L G + + +S A ++ D M +IGV + + Y G+
Sbjct: 160 LKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGK 219
Query: 290 REE-LKKLQRHIED----APNLTDIQFRQFYNCLLTCHLKFGDLDSASNMVLEMLGKAKQ 344
E+ L L+R + + N+T YN +L K G L ++L+M K
Sbjct: 220 LEDALGMLERMVSEFKVNPDNVT-------YNTILKAMSKKGRLSDLKELLLDM-KKNGL 271
Query: 345 ARNSLAAAKFINGAAKLDHNYFPGPASVHSLSNSEVMGSLENNQPIRSAFSSYEEFLKDR 404
N + + G KL GSL + AF E +K
Sbjct: 272 VPNRVTYNNLVYGYCKL--------------------GSL------KEAFQIVE-LMKQT 304
Query: 405 NFLQLEAESNAVLGSLL--AKLQKHVDLITTKHGI-LQPTETIYVKLVKAF------LEA 455
N L N ++ L +++ ++L+ + LQP Y L+ LEA
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 456 NK---------------TKDLAV-FLLKAEREDS------------PFSNDNSALVHVIN 487
K T ++++ +L K E+ ++ FS D +I
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 488 SCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQL 547
+ + +G L A +++ EM G++ + ++L A C+ + + +LL A K G +
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484
Query: 548 DSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGM---------------- 590
D +Y +I +E + AL+++ EMK+ KI P VS N +
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 591 --LTKSGAETDEATLMTKLLHEIKEGQ-------------------SVDCGVH------- 622
L +SG D++T + +L KEG+ + C +
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604
Query: 623 ----------------------DWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFH 660
+N +I FCK + +++A L +M G P+ T++
Sbjct: 605 GMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 664
Query: 661 SMVTGYAAIGGKYLEVTEL-------WGEMK 684
S ++ GK E EL +G MK
Sbjct: 665 SFISLLME-DGKLSETDELLKKFSGKFGSMK 694
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 120/288 (41%), Gaps = 19/288 (6%)
Query: 415 AVLGSLLAKLQKHVDLITTKHGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSP 474
++GS+ L+ D+ KHG+ +P Y L K F + + + D
Sbjct: 268 CLVGSIAEALELASDM--NKHGV-EPDSVTYNILAKGFHLLGMIS--GAWEVIRDMLDKG 322
Query: 475 FSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYAS-LLKAYCQANRAADV 533
S D ++ LG +D LL +M G S + S +L C+ R +
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 534 ASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGML-- 591
SL + G+ D +Y +I AL L+ EM + +I SR + +L
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 592 -TKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSL 650
+ G + +L+ L I G+++D + +N VI + K +++A + K +
Sbjct: 443 LCQKGMLLEARSLLDSL---ISSGETLD--IVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 651 GHSPNAQTFHSMVTGYA-----AIGGKYLEVTELWGEMKSLAXXXXXM 693
G +P+ TF+S++ GY A K L+V +L+G S+ M
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 95/206 (46%), Gaps = 6/206 (2%)
Query: 466 LKAEREDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYC 525
L ++R+ SP + L+ ++ G L +A L + M G R ++Y L+ +
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKS---GRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 526 QANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKI-PKVS 584
+A A +L + K G++ D +Y ++ + L F+E+KE+ + P V
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 585 RQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKAL 644
N ++ ++ L +E+K + + ++ +N++I ++++A K
Sbjct: 998 CYN--LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055
Query: 645 KKMRSLGHSPNAQTFHSMVTGYAAIG 670
+++ G PN TF++++ GY+ G
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSG 1081
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 120/288 (41%), Gaps = 19/288 (6%)
Query: 415 AVLGSLLAKLQKHVDLITTKHGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSP 474
++GS+ L+ D+ KHG+ +P Y L K F + + + D
Sbjct: 268 CLVGSIAEALELASDM--NKHGV-EPDSVTYNILAKGFHLLGMIS--GAWEVIRDMLDKG 322
Query: 475 FSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYAS-LLKAYCQANRAADV 533
S D ++ LG +D LL +M G S + S +L C+ R +
Sbjct: 323 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 382
Query: 534 ASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGML-- 591
SL + G+ D +Y +I AL L+ EM + +I SR + +L
Sbjct: 383 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 442
Query: 592 -TKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSL 650
+ G + +L+ L I G+++D + +N VI + K +++A + K +
Sbjct: 443 LCQKGMLLEARSLLDSL---ISSGETLD--IVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 651 GHSPNAQTFHSMVTGYA-----AIGGKYLEVTELWGEMKSLAXXXXXM 693
G +P+ TF+S++ GY A K L+V +L+G S+ M
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 110/269 (40%), Gaps = 49/269 (18%)
Query: 442 ETIYVKLVKAFLEANKTKDLAVFLLKAEREDS-PFSNDNSALVHVINSCISLGWLDQAHD 500
E +YV +K + K ++ + + D P +A++ V+ + G+ DQAH
Sbjct: 76 EGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVL---VDSGYFDQAHK 132
Query: 501 LLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQS-- 558
+ MR G+ + +K++C+ +R LL + G +++ +Y ++
Sbjct: 133 VYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFY 192
Query: 559 -------------------------------RVL--QEDTKGALKLFQE-MKEAKIPKVS 584
RVL + D K KL + +K +P +
Sbjct: 193 EENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLF 252
Query: 585 RQN---PGMLTKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAE 641
N G+ + E D A M L I++G D V +NN+I+ CK Q+AE
Sbjct: 253 TYNLFIQGLCQR--GELDGAVRMVGCL--IEQGPKPD--VITYNNLIYGLCKNSKFQEAE 306
Query: 642 KALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
L KM + G P++ T+++++ GY G
Sbjct: 307 VYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 15/183 (8%)
Query: 495 LDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEA 554
++ A ++LD M GV Y SLL C+ ++ DV + + G + ++
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 555 MIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNP-----GMLTKSGAETDEATLMTKLLH 609
+++S AL L +EMK + NP G L + + L
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSV------NPDAVTFGTLIDGFCKNGDLDGAYTLFR 590
Query: 610 EIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKM--RSLGHSPNAQTFHSMVTGYA 667
+++E V +N +IH F +K + AEK ++M R LG P+ T+ MV G+
Sbjct: 591 KMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG--PDGYTYRLMVDGFC 648
Query: 668 AIG 670
G
Sbjct: 649 KTG 651
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 4/173 (2%)
Query: 497 QAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMI 556
+A L +M G+ S Y +L+ YC+ ++ DA G D +Y ++I
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 557 QSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQ 615
+ +T AL LF E I P V N L K + +L +E+ E
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNT--LIKGLSNQGMILEAAQLANEMSEKG 421
Query: 616 SVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAA 668
+ V +N +++ CK + DA+ +K M S G+ P+ TF+ ++ GY+
Sbjct: 422 LIP-EVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 91/189 (48%), Gaps = 5/189 (2%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
++N I G +A + + G R Y +LL A + ++S++ + ++G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGMLTKSGAETDEATL 603
+LDS + A+I + + + A++ +MKE + P S N L K +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYN--TLIKGYGIAGKPER 168
Query: 604 MTKLLHEIKEGQSVDCG--VHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHS 661
++LL + E +VD G + +N ++ +CKK+ +++A + +KKM G P+ T+++
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 662 MVTGYAAIG 670
+ T Y G
Sbjct: 229 IATCYVQKG 237
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 120/614 (19%), Positives = 231/614 (37%), Gaps = 117/614 (19%)
Query: 83 IENAIDENQLDYSWKLFEQHMHMDGFPRKSVFNKLVTSYVESLDTQWLRKAYELEERAIE 142
I+ +++ + +LF++ + P +N L+ Y ++ + + K++++ ER
Sbjct: 221 IDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPE---KSFKVRERM-- 275
Query: 143 EGKHDLLEKEVLIYLSL--GLAKAGLPVLASTILRKMIGMGHFPRVTAWSAVLANMS--Q 198
K D +E ++ + +L GL KAG+ A +L++M +G P +S + S +
Sbjct: 276 --KADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 199 TADGSYLAAELILEIGYMFQNNRVDPRKKSNAPLIAMKPNTAAFNIALAGCLLFDTSRKA 258
A+ + E ++ G +K N +I L KA
Sbjct: 334 KAEAALGVYETAVDSG--------------------VKMNAYTCSILLNALCKEGKIEKA 373
Query: 259 EQLLDMMPRIGVKADSNLLVTMARIYERNGR----REELKKLQRHIEDAPNLTDIQFRQF 314
E++L G+ + + TM Y R G R +++ +++ +L
Sbjct: 374 EEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA------- 426
Query: 315 YNCLLTCHLKFGDLDSASNMVLEMLGKAKQARNSLAAAKFINGAAKLDHNYFPGPASVHS 374
YNCL+ + G++++A V +M K
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKG-------------------------------- 454
Query: 375 LSNSEVMGSLENNQPIRSAFSSYEEFLKDRNFLQLEAESNAVLGSLLAKLQKHVDLITTK 434
V S+E + + EF K + L+ E E N +
Sbjct: 455 -----VSPSVETYNILIGGYGRKYEFDKCFDILK-EMEDNGTM----------------- 491
Query: 435 HGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGW 494
P Y L+ + +K L ++K + ED S +I+ C S G
Sbjct: 492 -----PNVVSYGTLINCLCKGSKL--LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544
Query: 495 LDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEA 554
++ A EM G+ Y +L+ + ++ LL + + G++ D +Y +
Sbjct: 545 IEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNS 604
Query: 555 MIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQN--PGMLTKSGAETDEATLMTKLLHEI 611
+I + + + L++EMK + I P + + + TK G E E +L E+
Sbjct: 605 LISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTE-----RLFGEM 659
Query: 612 KEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGG 671
S+ + +N V+H + M+ A K+M + T++S++ G + G
Sbjct: 660 ----SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV-G 714
Query: 672 KYLEVTELWGEMKS 685
K EV L EM +
Sbjct: 715 KLCEVRSLIDEMNA 728
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 91/189 (48%), Gaps = 5/189 (2%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
++N I G +A + + G R Y +LL A + ++S++ + ++G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGMLTKSGAETDEATL 603
+LDS + A+I + + + A++ +MKE + P S N L K +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYN--TLIKGYGIAGKPER 168
Query: 604 MTKLLHEIKEGQSVDCG--VHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHS 661
++LL + E +VD G + +N ++ +CKK+ +++A + +KKM G P+ T+++
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 662 MVTGYAAIG 670
+ T Y G
Sbjct: 229 IATCYVQKG 237
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 111/256 (43%), Gaps = 12/256 (4%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
VIN G ++A ++ EM +G+ S+ Y SLL C+ + + D R
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAK-IPKVSRQNPGMLTKSGAETDEATL 603
+ D + +M+ + AL F +KEA IP +L + ++
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT--ILIQGYCRKGMISV 428
Query: 604 MTKLLHE-IKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSM 662
L +E +++G ++D V +N ++H CK++++ +A+K +M P++ T +
Sbjct: 429 AMNLRNEMLQQGCAMD--VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 663 VTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSM 722
+ G+ + G EL+ +MK ++ D +++L F + G A E+ +
Sbjct: 487 IDGHCKL-GNLQNAMELFQKMKE-----KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 723 MEKGKMFIDKYKYRML 738
M ++ Y +L
Sbjct: 541 MVSKEILPTPISYSIL 556
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 132/307 (42%), Gaps = 53/307 (17%)
Query: 442 ETIYVKLVKAFLEANKTKDL--AVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAH 499
++++ L++ +++A K ++ A LL+++ F+ A +I S + +GW++ A
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSK----GFTVSIDACNALIGSLVRIGWVELAW 220
Query: 500 DLLDEMRLAGVRTGSSVYA--SLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
+ E+ +GV G +VY ++ A C+ + V + L ++ G+ D +Y +I
Sbjct: 221 GVYQEISRSGV--GINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 558 SRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSV 617
+ +KG ++ E+ A +P G+
Sbjct: 279 AY----SSKGLMEEAFELMNA-MP--------------------------------GKGF 301
Query: 618 DCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVT 677
GV+ +N VI+ CK + A++ +M G SP++ T+ S++ A G +E
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLM-EACKKGDVVETE 360
Query: 678 ELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDKYKYRM 737
+++ +M+S + F S++ F R G +A + +++ + D Y +
Sbjct: 361 KVFSDMRSRDVVPDLVCF-----SSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 738 LFLKYHK 744
L Y +
Sbjct: 416 LIQGYCR 422
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 129/279 (46%), Gaps = 13/279 (4%)
Query: 434 KHGILQPTETIYVKLVKAFLEANKT-KDLAVFLLKAEREDSPFSNDNSALVHVINSCISL 492
++GI+ P Y L+ ++ + + K VFL+ + P +AL+ S
Sbjct: 251 QNGII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN--- 306
Query: 493 GWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSY 552
G+L +A ++ +M G++ +LL A ++ + +V ++L A+ GI L++++Y
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 366
Query: 553 EAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIK 612
+ I S + + + A+ L+Q M++ K+ K +L + L E+
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKKV-KADSVTFTILISGSCRMSKYPEAISYLKEM- 424
Query: 613 EGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGK 672
E S+ +++V+ + K+ + +AE +M+ G P+ + SM+ Y A K
Sbjct: 425 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA-SEK 483
Query: 673 YLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGG 711
+ + EL+ EM++ ++ D +++ F +GG
Sbjct: 484 WGKACELFLEMEA-----NGIEPDSIACSALMRAFNKGG 517
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 129/279 (46%), Gaps = 13/279 (4%)
Query: 434 KHGILQPTETIYVKLVKAFLEANKT-KDLAVFLLKAEREDSPFSNDNSALVHVINSCISL 492
++GI+ P Y L+ ++ + + K VFL+ + P +AL+ S
Sbjct: 383 QNGII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN--- 438
Query: 493 GWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSY 552
G+L +A ++ +M G++ +LL A ++ + +V ++L A+ GI L++++Y
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 498
Query: 553 EAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIK 612
+ I S + + + A+ L+Q M++ K+ K +L + L E+
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKV-KADSVTFTILISGSCRMSKYPEAISYLKEM- 556
Query: 613 EGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGK 672
E S+ +++V+ + K+ + +AE +M+ G P+ + SM+ Y A K
Sbjct: 557 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA-SEK 615
Query: 673 YLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGG 711
+ + EL+ EM++ ++ D +++ F +GG
Sbjct: 616 WGKACELFLEMEA-----NGIEPDSIACSALMRAFNKGG 649
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 18/191 (9%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
VI+ G D+A +L EMR G+ Y +LL Y + R+ + +LR+ G
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKS--------GA 596
I+ D +Y A++ Q K+F EMK + P +LT S G
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL------PNLLTYSTLIDGYSKGG 528
Query: 597 ETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNA 656
EA ++ E K + V ++ +I CK L+ A + +M G SPN
Sbjct: 529 LYKEA---MEIFREFKSA-GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 657 QTFHSMVTGYA 667
T++S++ +
Sbjct: 585 VTYNSIIDAFG 595
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 7/234 (2%)
Query: 439 QPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQA 498
QP Y ++ + + DLA+ LL + E D +I+ +D A
Sbjct: 212 QPDLVTYGAVINGLCKRGE-PDLALNLLN-KMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 499 HDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQS 558
DL ++M G++ Y L+ C R +D + LL D + I D + A+I +
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 559 RVLQEDTKGALKLFQEMKEAK--IPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQS 616
V + A KL+ EM ++K P V N L K + ++ E+ +
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT--LIKGFCKYKRVEEGMEVFREMSQRGL 387
Query: 617 VDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
V V + +IH F + R +A+ K+M S G P+ T++ ++ G G
Sbjct: 388 VGNTV-TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 128/310 (41%), Gaps = 14/310 (4%)
Query: 440 PTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAH 499
P+ + KL+ A + NK DL V L + ++ S++ IN L A
Sbjct: 73 PSIVEFSKLLSAIAKMNKF-DL-VISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLAL 130
Query: 500 DLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSR 559
+L +M G SLL +C NR ++ +L+ + G Q D+ ++ ++
Sbjct: 131 AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 190
Query: 560 VLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVDC 619
A+ L + M K + G + + E L LL+++++G+ ++
Sbjct: 191 FQHNKASEAVALVERMV-VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK-IEA 248
Query: 620 GVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTEL 679
V +N +I CK + M DA KM + G P+ T++ +++ G++ + + L
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY-GRWSDASRL 307
Query: 680 WGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGK-MFIDKYKYRML 738
+M + D ++++ FV+ G A ++ M K K F D Y L
Sbjct: 308 LSDM-----LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTL 362
Query: 739 ---FLKYHKT 745
F KY +
Sbjct: 363 IKGFCKYKRV 372
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 86/209 (41%), Gaps = 39/209 (18%)
Query: 462 AVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLL 521
VF + E+E + + +I++C S+ +++A ++M AG + +Y +L+
Sbjct: 461 VVFFMDMEKEG--VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 522 KAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIP 581
CQ R D ++ ++ G LD +Y +I + +T+ ++ +M+
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDME----- 573
Query: 582 KVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAE 641
K G + D T +N +I FF K + + E
Sbjct: 574 -----------KEGKKPDSIT---------------------YNTLISFFGKHKDFESVE 601
Query: 642 KALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
+ +++MR G P T+ +++ Y ++G
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 111/256 (43%), Gaps = 22/256 (8%)
Query: 438 LQPTETIYVKLVKAFLEANKT---KDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGW 494
+ E IY ++ + +T K++ L+K +R ++ NS +I+ + +G
Sbjct: 550 FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNS----IIDGFVKVGD 605
Query: 495 LDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEA 554
D A + EM G + SL+ +C++NR + + + ++LD +Y A
Sbjct: 606 TDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGA 665
Query: 555 MIQSRVLQEDTKGALKLFQEMKE-AKIPKVSRQNPGM-----LTKSGAETDEATLMTKLL 608
+I + D K A LF E+ E +P VS N + L K A D L K++
Sbjct: 666 LIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAID---LYKKMV 722
Query: 609 HEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAA 668
++ + C + + +I K + A ++ LG P+ + H ++ +
Sbjct: 723 ND-----GISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPD-EILHMVLVNGLS 776
Query: 669 IGGKYLEVTELWGEMK 684
G++L+ +++ EMK
Sbjct: 777 KKGQFLKASKMLEEMK 792
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 11/218 (5%)
Query: 455 ANKTKDL--AVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRT 512
A KT DL A+ LL+ R VI + + G +++A ++DEM G+
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343
Query: 513 GSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLF 572
SL+ YC+ N L + G+ D + M++ + + A++ +
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403
Query: 573 QEMKEAKIPKVSRQNPGMLTKS-GAETDEATLMTKLLHEIKEGQSVDCGVHDW--NNVIH 629
MK +I S M+ AE+ EA L EI H + N +
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQGCLKAESPEAAL------EIFNDSFESWIAHGFMCNKIFL 457
Query: 630 FFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYA 667
FCK+ + A LK M G PN +++M+ +
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHC 495
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 87/209 (41%), Gaps = 39/209 (18%)
Query: 462 AVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLL 521
VF + E+E + + +I++C S+ +++A ++M AG + +Y +L+
Sbjct: 461 VVFFMDMEKEG--VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 522 KAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIP 581
CQ R D ++ ++ G LD +Y +I L D A K+++ + +
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG---LFCDKNNAEKVYEMLTD---- 571
Query: 582 KVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAE 641
+ K G + D T +N +I FF K + + E
Sbjct: 572 ---------MEKEGKKPDSIT---------------------YNTLISFFGKHKDFESVE 601
Query: 642 KALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
+ +++MR G P T+ +++ Y ++G
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 128/334 (38%), Gaps = 43/334 (12%)
Query: 440 PTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAH 499
P+ + +L+ A + NK + AV L E S+D + +I+ L A
Sbjct: 77 PSIVDFSRLLIAIAKLNKYE--AVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLAL 134
Query: 500 DLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSR 559
L +M G + SL+ +C NR + SL+ G + + Y +I S
Sbjct: 135 SCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSL 194
Query: 560 VLQEDTKGALKLFQEMKEAKI-PKVSRQNPGM------------------LTKSGAETDE 600
+ AL + + MK+ I P V N + + + G D
Sbjct: 195 CEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV 254
Query: 601 ATLMTKLLHEIKEGQ--------------SVDCGVHDWNNVIHFFCKKRLMQDAEKALKK 646
T + KEGQ SV+ + +N++I+ C L+ +A+K L
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNV 314
Query: 647 MRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEMKSLAXXXX-XMKFDQELLDSVLY 705
+ S G PNA T+++++ GY + + MK L + D +++
Sbjct: 315 LVSKGFFPNAVTYNTLINGYC-------KAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQ 367
Query: 706 TFVRGGFFTRANEVVSMMEKGKMFIDKYKYRMLF 739
+ + G F+ A +V+ M + D Y + +L
Sbjct: 368 GYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILL 401
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 35/205 (17%)
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A +L EM G+ Y ++ ++C + R +D LLR + I D ++ A+I
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 558 SRVLQEDTKGALKLFQEM--------------------KEAKIPKVSRQNPGMLTKSGAE 597
+ V + A ++++EM K+ ++ R M +K G
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASK-GCS 147
Query: 598 TDEATLMTKL-----LHEIKEGQSVDCGVH---------DWNNVIHFFCKKRLMQDAEKA 643
D T T + + G + C +H + +IH FC+ + A+
Sbjct: 148 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 207
Query: 644 LKKMRSLGHSPNAQTFHSMVTGYAA 668
L +M S G +P+ TFH M+ G +
Sbjct: 208 LNEMISCGVAPDYITFHCMLAGLCS 232
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 12/248 (4%)
Query: 440 PTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAH 499
P++ YV ++ +E N+ +LA K RE S V + C + G +D
Sbjct: 119 PSQKAYVTVLAILVEENQL-NLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGL 177
Query: 500 DLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSR 559
+ EM G S Y +L+ C+ R + L + + +Y ++I
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237
Query: 560 VLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKS----GAETDEATLMTKLLHEIKEGQ 615
++ A++ +EMK I P + T S G D +L L E+ +
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGI------EPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR 291
Query: 616 SVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLE 675
+ + +I CK++ +Q+A + L +M G P+A + +++G+ AI K+ E
Sbjct: 292 GCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAI-SKFRE 350
Query: 676 VTELWGEM 683
EM
Sbjct: 351 AANFLDEM 358
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 116/280 (41%), Gaps = 39/280 (13%)
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
+ P++ I KL++A E + K +AVF + + +D S+ +++ +S
Sbjct: 14 ITPSQVI--KLMRA--EKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKA 69
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A DL+ M++ + S+ + Y + +R D + + +Y ++
Sbjct: 70 AEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLA 129
Query: 558 SRVLQEDTKGALKLFQEMKEAKIP----------KVSRQNPGM----------LTKSGAE 597
V + A K ++ M+E +P K +N G + K G +
Sbjct: 130 ILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCD 189
Query: 598 TDE---ATLMTKLLH--EIKEGQSV-------DCG--VHDWNNVIHFFCKKRLMQDAEKA 643
D TL++ L I E + + DC V + ++I+ C + + +A +
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249
Query: 644 LKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEM 683
L++M+S G PN T+ S++ G G+ L+ EL+ M
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCK-DGRSLQAMELFEMM 288
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 87/209 (41%), Gaps = 39/209 (18%)
Query: 462 AVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLL 521
VF + E+E + + +I++C S+ +++A ++M AG + +Y +L+
Sbjct: 461 VVFFMDMEKEG--VKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALI 518
Query: 522 KAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIP 581
CQ R D ++ ++ G LD +Y +I L D A K+++ + +
Sbjct: 519 SGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIG---LFCDKNNAEKVYEMLTD---- 571
Query: 582 KVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAE 641
+ K G + D T +N +I FF K + + E
Sbjct: 572 ---------MEKEGKKPDSIT---------------------YNTLISFFGKHKDFESVE 601
Query: 642 KALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
+ +++MR G P T+ +++ Y ++G
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 132/304 (43%), Gaps = 16/304 (5%)
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
+P+ L+ F + N+ ++ AV L+ + + F + VIN L+
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQE-AVSLVDS-MDGFGFVPNVVIYNTVINGLCKNRDLNN 202
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A ++ M G+R + Y +L+ + R D A LLRD K I + + A+I
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 558 SRVLQEDTKGALKLFQEM-KEAKIPKVSRQNPGM--LTKSGAETDEATLMTKLLHEIKEG 614
+ V + + A L++EM + + +P V N + G D A M L+ + +G
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGD-AKYMFDLM--VSKG 319
Query: 615 QSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYL 674
D V +N +I FCK + ++D K +M G +A T+++++ GY GK
Sbjct: 320 CFPD--VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ-AGKLN 376
Query: 675 EVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDKYK 734
+++ M + ++ LLD + G +A +V ++K +M +D
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNI-LLDCL----CNNGKIEKALVMVEDLQKSEMDVDIIT 431
Query: 735 YRML 738
Y ++
Sbjct: 432 YNII 435
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 35/261 (13%)
Query: 440 PTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAH 499
P+ + +++ + NK D+ ++L + E+ S+D + +I+ L A
Sbjct: 77 PSIVDFTRVLTVIAKMNKF-DIVIYLYH-KMENLGISHDLYSFTILIHCFCRCSRLSLAL 134
Query: 500 DLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSR 559
LL +M G R SLL +CQ NR + SL+ G + Y +I
Sbjct: 135 ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 194
Query: 560 VLQEDTKGALKLFQEMKEAKIPKVSRQNPGM---LTKSGAETDEATLMTKLLHE------ 610
D AL++F M++ I + + L+ SG TD A L+ ++
Sbjct: 195 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 254
Query: 611 ----------IKEG--------------QSVDCGVHDWNNVIHFFCKKRLMQDAEKALKK 646
+KEG +SV V +N++I+ FC + DA+
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 647 MRSLGHSPNAQTFHSMVTGYA 667
M S G P+ T+++++TG+
Sbjct: 315 MVSKGCFPDVVTYNTLITGFC 335
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/192 (18%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQ---ANRAADVASLLRDAR 541
VIN+ G +++A D++++M++ G Y +L+ YC+ + ++L++
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288
Query: 542 KAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGM--LTKSGAET 598
+ + + +++ +I ++ G++K+F+EM + + P V N + L G +
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348
Query: 599 DEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQT 658
+ ++ K++ V + +N +I+ FCK ++++A ++ G P +
Sbjct: 349 EAISMRDKMV-----SAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM 403
Query: 659 FHSMVTGYAAIG 670
++ ++ Y +G
Sbjct: 404 YNMLIDAYCKLG 415
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 93/235 (39%), Gaps = 39/235 (16%)
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
+QPT+ Y L+ NKT++ K + D + +++ ++G +D+
Sbjct: 428 IQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG--MKPDLVMMNTLMDGHCAIGNMDR 485
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A LL EM + + Y L++ C + + L+ + ++ GI+ D SY +I
Sbjct: 486 AFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545
Query: 558 SRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSV 617
+ DTK A + EM NP +LT
Sbjct: 546 GYSKKGDTKHAFMVRDEMLSLGF------NPTLLT------------------------- 574
Query: 618 DCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGK 672
+N ++ K + + AE+ L++M+S G PN +F S++ + + K
Sbjct: 575 ------YNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAK 623
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 82/205 (40%), Gaps = 13/205 (6%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
+I C + G L+ A DEM G+ Y +L+ N+ L+R+ R+ G
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGML-----TKSGAETD 599
I LDS +Y +I D K A L EM I ++ E D
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 600 EATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTF 659
E L E G+ + + N ++ C M A LK+M + +P+ T+
Sbjct: 453 E-------LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTY 505
Query: 660 HSMVTGYAAIGGKYLEVTELWGEMK 684
+ ++ G GK+ E EL GEMK
Sbjct: 506 NCLMRGLCG-EGKFEEARELMGEMK 529
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 149/327 (45%), Gaps = 27/327 (8%)
Query: 427 HVDLITTKHGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAERED-SPFSNDNSALVHV 485
+V L+ +++ PTE Y L+KA+ A + V L++ + SP + V V
Sbjct: 178 YVQLLESRY---VPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSP----KTIGVTV 230
Query: 486 INSCIS-----LGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDA 540
N+ I G ++A D+ M+ + + Y ++ Y +A+++ L +
Sbjct: 231 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 290
Query: 541 RKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGM--LTKSGAE 597
R + + +Y A++ + + + A ++F++++E + P V N M +++G
Sbjct: 291 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 350
Query: 598 TDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQ 657
A + + + H E +N ++ + + L DAE ++M+ LG +P +
Sbjct: 351 YGAAEIFSLMQHMGCEPDRAS-----YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 405
Query: 658 TFHSMVTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRAN 717
+ +++ Y+ K +VT+ +K ++ ++ D +L+S+L + R G FT+
Sbjct: 406 SHMLLLSAYS----KARDVTKCEAIVKEMSENG--VEPDTFVLNSMLNLYGRLGQFTKME 459
Query: 718 EVVSMMEKGKMFIDKYKYRMLFLKYHK 744
++++ ME G D Y +L Y K
Sbjct: 460 KILAEMENGPCTADISTYNILINIYGK 486
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 14/244 (5%)
Query: 432 TTKHGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCIS 491
T G + P T Y LV+ F + + + + L E D ++ ++ +
Sbjct: 272 TMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLL--GEMASGGSLPDITSYNVLLEAYAK 329
Query: 492 LGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSS 551
G + +A + +M+ AG ++ Y+ LL + Q+ R DV L + + + D+++
Sbjct: 330 SGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAAT 389
Query: 552 YEAMIQSRVLQEDT--KGALKLFQEMKEAKIPKVSRQNPGML---TKSGAETDEATLMTK 606
Y +I+ V E K + LF +M E I G++ K G D K
Sbjct: 390 YNILIE--VFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHED----ARK 443
Query: 607 LLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGY 666
+L + V + VI F + L ++A A M +G +P+ +TFHS++ +
Sbjct: 444 ILQYMTANDIVPSS-KAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSF 502
Query: 667 AAIG 670
A G
Sbjct: 503 ARGG 506
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 149/327 (45%), Gaps = 27/327 (8%)
Query: 427 HVDLITTKHGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAERED-SPFSNDNSALVHV 485
+V L+ +++ PTE Y L+KA+ A + V L++ + SP + V V
Sbjct: 200 YVQLLESRY---VPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSP----KTIGVTV 252
Query: 486 INSCIS-----LGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDA 540
N+ I G ++A D+ M+ + + Y ++ Y +A+++ L +
Sbjct: 253 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM 312
Query: 541 RKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGM--LTKSGAE 597
R + + +Y A++ + + + A ++F++++E + P V N M +++G
Sbjct: 313 RSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 372
Query: 598 TDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQ 657
A + + + H E +N ++ + + L DAE ++M+ LG +P +
Sbjct: 373 YGAAEIFSLMQHMGCEPDRAS-----YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK 427
Query: 658 TFHSMVTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRAN 717
+ +++ Y+ K +VT+ +K ++ ++ D +L+S+L + R G FT+
Sbjct: 428 SHMLLLSAYS----KARDVTKCEAIVKEMSENG--VEPDTFVLNSMLNLYGRLGQFTKME 481
Query: 718 EVVSMMEKGKMFIDKYKYRMLFLKYHK 744
++++ ME G D Y +L Y K
Sbjct: 482 KILAEMENGPCTADISTYNILINIYGK 508
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 94/245 (38%), Gaps = 26/245 (10%)
Query: 440 PTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAH 499
P + Y K++ A+K + FLL E + D +++S G ++QA
Sbjct: 481 PDTSTYSKVLNYLCNASKME--LAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 500 DLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSR 559
+EMR G Y +L+ AY +A + + L G + +Y A+I
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 560 VLQEDTKGALKLFQEMKEAK-IPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVD 618
+ A ++F+ M +K +P V M K + E
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVD-----MYFKQYDDNSERP---------------- 637
Query: 619 CGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTE 678
V + ++ FCK +++A K L M G PN + +++ G + GK E E
Sbjct: 638 -NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV-GKLDEAQE 695
Query: 679 LWGEM 683
+ EM
Sbjct: 696 VKTEM 700
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 135/308 (43%), Gaps = 23/308 (7%)
Query: 370 ASVHSLSNSEVMGSLENNQPIRSAFSSYEEFLKDRNFLQLEAESNAVLGSLLAKLQKHVD 429
SVH+L+N MG L N I + Y+E + +++ N V+ S K K +
Sbjct: 181 VSVHALNN--FMGCLLNVNEIDRFWKVYKE-MDSLGYVENVNTFNLVIYSF-CKESKLFE 236
Query: 430 LITTKHGILQ----PTETIYVKLVKAFLEANKTKDLAV---FLLKAEREDSPFSNDNSAL 482
++ + +L+ P + ++ A KT D+ L K F + N+
Sbjct: 237 ALSVFYRMLKCGVWPNVVSFNMMIDG---ACKTGDMRFALQLLGKMGMMSGNFVSPNAVT 293
Query: 483 VH-VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDAR 541
+ VIN G LD A + +M +GV Y +L+ AY +A + + L +
Sbjct: 294 YNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMT 353
Query: 542 KAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKS---GAET 598
G+ +++ Y +++ ++ D +GA+ + ++M +K ++ R ++ +
Sbjct: 354 SKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMN-SKNMQIDRFTQAIVVRGLCRNGYV 412
Query: 599 DEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQT 658
EA + + E K + + C N ++H F + + + A++ L M G S +A +
Sbjct: 413 KEAVEFQRQISEKKLVEDIVC----HNTLMHHFVRDKKLACADQILGSMLVQGLSLDAIS 468
Query: 659 FHSMVTGY 666
F +++ GY
Sbjct: 469 FGTLIDGY 476
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 24/194 (12%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
+IN +G + A +LL +M ++ +Y +++ C+ +L + G
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLM 604
I D +Y MI S A +L ++M E +I NP ++T S L+
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQI------NPDVVTFSA-------LI 153
Query: 605 TKLLHEIKEGQSVDC-------GVH----DWNNVIHFFCKKRLMQDAEKALKKMRSLGHS 653
L+ E K ++ + G+ +N++I FCK+ + DA++ L M S S
Sbjct: 154 NALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCS 213
Query: 654 PNAQTFHSMVTGYA 667
P+ TF +++ GY
Sbjct: 214 PDVVTFSTLINGYC 227
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 74/185 (40%), Gaps = 37/185 (20%)
Query: 486 INSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGI 545
++S + G +D A EMR + ++ YC++ + LL+D + G
Sbjct: 210 MSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269
Query: 546 QLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMT 605
+ SY +I + ALKL M+ KSG + + T
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKL----------------KNMMGKSGLQPNVVT--- 310
Query: 606 KLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTG 665
+N +IH FC+ +Q+A K +M+++ +PN T+++++ G
Sbjct: 311 ------------------FNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 666 YAAIG 670
Y+ G
Sbjct: 353 YSQQG 357
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 74/185 (40%), Gaps = 37/185 (20%)
Query: 486 INSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGI 545
++S + G +D A EMR + ++ YC++ + LL+D + G
Sbjct: 210 MSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269
Query: 546 QLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMT 605
+ SY +I + ALKL M+ KSG + + T
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKL----------------KNMMGKSGLQPNVVT--- 310
Query: 606 KLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTG 665
+N +IH FC+ +Q+A K +M+++ +PN T+++++ G
Sbjct: 311 ------------------FNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 666 YAAIG 670
Y+ G
Sbjct: 353 YSQQG 357
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/263 (18%), Positives = 116/263 (44%), Gaps = 45/263 (17%)
Query: 463 VFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLK 522
++++ E +D F S+++ ++++ G + + + M+ AG +Y +++
Sbjct: 841 LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIE 900
Query: 523 AYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPK 582
C+ R D ++ + +A +++ + + +M++ ED K ++++Q +KE
Sbjct: 901 LLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKE----- 955
Query: 583 VSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEK 642
+G E DE T +N +I +C+ R ++
Sbjct: 956 -----------TGLEPDETT---------------------YNTLIIMYCRDRRPEEGYL 983
Query: 643 ALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTE-LWGEMKSLAXXXXXMKFDQELLD 701
+++MR+LG P T+ S+++ + K LE E L+ E+ S +K D+
Sbjct: 984 LMQQMRNLGLDPKLDTYKSLISAFGK--QKCLEQAEQLFEELLS-----KGLKLDRSFYH 1036
Query: 702 SVLYTFVRGGFFTRANEVVSMME 724
+++ G ++A +++ MM+
Sbjct: 1037 TMMKISRDSGSDSKAEKLLQMMK 1059
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 91/198 (45%), Gaps = 5/198 (2%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
++N G L A +++D M G+R Y +L+ +C+ + ++ + G
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLM 604
I+LD + A++ + A + +EM A I K M+ + + +A
Sbjct: 446 IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI-KPDDVTYTMMMDAFCKKGDAQTG 504
Query: 605 TKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVT 664
KLL E++ V V +N +++ CK M++A+ L M ++G P+ T+++++
Sbjct: 505 FKLLKEMQSDGHVP-SVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Query: 665 G---YAAIGGKYLEVTEL 679
G +A +Y++ E+
Sbjct: 564 GHHRHANSSKRYIQKPEI 581
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 475 FSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVA 534
S + LV +I++ G +A L +E+R +G++ + Y +LLK Y + D
Sbjct: 300 LSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAE 359
Query: 535 SLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKS 594
S++ + K G+ D +Y +I + V + A + +EM+ + + N + ++
Sbjct: 360 SMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV----QPNSFVFSRL 415
Query: 595 GAETDEATLMTKLLHEIKEGQSVDCGVHD----WNNVIHFFCKKRLMQDAEKALKKMRSL 650
A + K +KE +S+ GV +N VI F K + A +M S
Sbjct: 416 LAGFRDRGEWQKTFQVLKEMKSI--GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE 473
Query: 651 GHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEMK 684
G P+ T+++++ + G+++ E++ M+
Sbjct: 474 GIEPDRVTWNTLIDCHCK-HGRHIVAEEMFEAME 506
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 102/250 (40%), Gaps = 5/250 (2%)
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
++P Y L+K +++ KD + +E E S D +I++ ++ G +
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMV--SEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A +L EM V+ S V++ LL + +L++ + G++ D Y +I
Sbjct: 393 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 452
Query: 558 SRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSV 617
+ A+ F M I + R L + + ++ ++ +
Sbjct: 453 TFGKFNCLDHAMTTFDRMLSEGI-EPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL 511
Query: 618 DCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVT 677
C +N +I+ + + D ++ L KM+S G PN T ++V Y G++ +
Sbjct: 512 PCAT-TYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK-SGRFNDAI 569
Query: 678 ELWGEMKSLA 687
E EMKS+
Sbjct: 570 ECLEEMKSVG 579
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 4/180 (2%)
Query: 492 LGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSS 551
LG D +M AG R Y ++ C+ L + + G+ D+ +
Sbjct: 240 LGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVT 299
Query: 552 YEAMIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNPGMLTKSGAETDEATLMTKLLHE 610
Y +MI + F+EMK+ P V N L + + + + E
Sbjct: 300 YNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA--LINCFCKFGKLPIGLEFYRE 357
Query: 611 IKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIG 670
+K G + V ++ ++ FCK+ +MQ A K MR +G PN T+ S++ IG
Sbjct: 358 MK-GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG 416
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 5/204 (2%)
Query: 493 GWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSY 552
G + QA +MR G+ Y SL+ A C+ +D L + + G++ + +Y
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 440
Query: 553 EAMIQSRVLQEDTKGALKLFQEMKEAK-IPKVSRQNPGMLTKSGAETDEATLMTKLLHEI 611
A+I E K A +LF +M A IP ++ N + A+ + L +LL+E+
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL--ELLNEL 498
Query: 612 KEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGG 671
K G+ + + + I C ++ A+ + +M+ G N+ + +++ Y G
Sbjct: 499 K-GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK-SG 556
Query: 672 KYLEVTELWGEMKSLAXXXXXMKF 695
E L EMK L + F
Sbjct: 557 NPTEGLHLLDEMKELDIEVTVVTF 580
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 142/343 (41%), Gaps = 45/343 (13%)
Query: 326 GDLD-SASNMVLEMLGKAKQARNSLAA-AKFINGAAKLDHNYFPGPASVHSLSNSEVMGS 383
GDL +A N V++ L KA++ + K K+D + N+ +M
Sbjct: 239 GDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTY----------NNLMMLF 288
Query: 384 LENNQPIRSAFSSYEEFLKDRNFL-----QLEAESNAVLGSLLAKLQKHVDLITTKHGIL 438
L P + AF YE K + L +L S A G L A + + K L
Sbjct: 289 LNKGLPYK-AFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERK---L 344
Query: 439 QPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSA--LVHVINSCISLGWLD 496
+P+ +++ LV + +A + +K E F + SA V +I+S G LD
Sbjct: 345 RPSFSVFSSLVDSMGKAGRLDTS----MKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLD 400
Query: 497 QAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMI 556
A L DEM+ +G R +Y +++++ ++ + ++ +D KAG S+Y ++
Sbjct: 401 TALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLL 460
Query: 557 QSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGM-----LTKSGAETDEATLMTKLLHEI 611
+ A+K++ M A + PG+ L A + K+L E+
Sbjct: 461 EMHAGSGQVDSAMKIYNSMTNAGL------RPGLSSYISLLTLLANKRLVDVAGKILLEM 514
Query: 612 KE-GQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHS 653
K G SVD D V+ + K + ALK +R +G S
Sbjct: 515 KAMGYSVDVCASD---VLMIYIKD---ASVDLALKWLRFMGSS 551
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 116/280 (41%), Gaps = 12/280 (4%)
Query: 460 DLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYAS 519
DLA + + + D S +N L +++S G L A LL ++ V V S
Sbjct: 120 DLAGQMFECMKSDG-VSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNS 176
Query: 520 LLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAK 579
LL + +R D L + + D+ ++ +I+ + AL+L M
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFG 236
Query: 580 I-PKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQ 638
P + N L + +++E +++ ++K G V + ++I +CK M+
Sbjct: 237 CEPDIVTYN--TLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 639 DAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQE 698
+A L M LG P TF+ +V GYA G+ L E+ G+M S + F
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAK-AGEMLTAEEIRGKMISFGCFPDVVTF--- 350
Query: 699 LLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDKYKYRML 738
S++ + R G ++ + M MF + + Y +L
Sbjct: 351 --TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 116/280 (41%), Gaps = 12/280 (4%)
Query: 460 DLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYAS 519
DLA + + + D S +N L +++S G L A LL ++ V V S
Sbjct: 120 DLAGQMFECMKSDG-VSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNS 176
Query: 520 LLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAK 579
LL + +R D L + + D+ ++ +I+ + AL+L M
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFG 236
Query: 580 I-PKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQ 638
P + N L + +++E +++ ++K G V + ++I +CK M+
Sbjct: 237 CEPDIVTYN--TLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 639 DAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQE 698
+A L M LG P TF+ +V GYA G+ L E+ G+M S + F
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAK-AGEMLTAEEIRGKMISFGCFPDVVTF--- 350
Query: 699 LLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDKYKYRML 738
S++ + R G ++ + M MF + + Y +L
Sbjct: 351 --TSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSIL 388
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 86/427 (20%), Positives = 160/427 (37%), Gaps = 75/427 (17%)
Query: 315 YNCLLTCHLKFGDLDSASNMVLEMLGKAKQARNSLAAAKFI----NGAAKLDHNY----- 365
YNC+LTC K G +D A + EM K A +L+ + A KLD +
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEEM---KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDS 402
Query: 366 ------FPGPASVHSLSNSEVMGSLENNQPIRSAFSSYEEFLKDRNFLQLEAESNAVLGS 419
FP +V+ + + L +Q + A + +EE D + + L
Sbjct: 403 MQKAGLFPNVRTVNIMVDR-----LCKSQKLDEACAMFEEM--DYKVCTPDEITFCSLID 455
Query: 420 LLAKLQKHVDLITTKHGIL----QPTETIYVKLVKAF----------------LEANKTK 459
L K+ + D +L + +Y L+K F + N +
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 460 DL--------------------AVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAH 499
DL A+F R P + S L+H + I G+ ++ +
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL---IKAGFANETY 572
Query: 500 DLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSR 559
+L M+ G + Y ++ +C+ + LL + + G + +Y ++I
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 560 VLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSG--AETDEATLMTKLLHEIKEGQSV 617
+ A LF+E K +I ++ G DEA L +L E+ + + +
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL---ILEELMQ-KGL 688
Query: 618 DCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVT 677
++ WN+++ K + +A + M+ L +PN T+ ++ G + K+ +
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV-RKFNKAF 747
Query: 678 ELWGEMK 684
W EM+
Sbjct: 748 VFWQEMQ 754
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 137/336 (40%), Gaps = 17/336 (5%)
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
+ P Y ++++ ++ K K L + + D + + + + + +C G +
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC-YPDVITYTILIEATCRDSG-VGH 257
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A LLDEMR G Y L+ C+ R + L D +G Q + ++ +++
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 558 SRVLQEDTKGALKLFQEM-KEAKIPKVSRQNP--GMLTKSGAETDEATLMTKLLHEIKEG 614
S A KL +M ++ P V N L + G ++ K+ +
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 615 QSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYL 674
S+ +N ++H FCK++ M A + L++M S G P+ T+++M+T GK
Sbjct: 378 NSLS-----YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK-DGKVE 431
Query: 675 EVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEKGKMFIDKYK 734
+ E+ ++ S + + ++V+ + G +A +++ M + D
Sbjct: 432 DAVEILNQLSSKGCSPVLITY-----NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486
Query: 735 YRMLFLKYHKTLYKGKAPKFQTE-SQLNKREAAIAF 769
Y L + +A KF E ++ R A+ F
Sbjct: 487 YSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 116/296 (39%), Gaps = 17/296 (5%)
Query: 432 TTKHGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCIS 491
T + G+++ ++K++K E +K LL + P+ D V +I S
Sbjct: 140 TERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDED--MFVVLIESYGK 197
Query: 492 LGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSS 551
G + ++ + +M+ GV Y SL K + R G++ +
Sbjct: 198 AGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHT 257
Query: 552 YEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTK--SGAETDEATLMTKLLH 609
Y M+ L + AL+ F++MK I M+ + DEA KL
Sbjct: 258 YNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEA---EKLFV 314
Query: 610 EIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAI 669
E+K G + V + +I + + D + ++MRS G PNA T+ +++ G
Sbjct: 315 EMK-GNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCD- 372
Query: 670 GGKYLEVTELWGEM--KSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMM 723
GK +E + M K +A D + +L + + G A EV+ M
Sbjct: 373 AGKMVEAKNILKNMMAKHIAPK------DNSIFLKLLVSQSKAGDMAAATEVLKAM 422
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 95/246 (38%), Gaps = 39/246 (15%)
Query: 440 PTETIYVKLVKAFLEANKTKDLAVFLLKAERED-SPFSNDNSALVHVINSCISLGWLDQA 498
P +Y +V+A +K K+ + +E+ +P +A + + L W ++
Sbjct: 420 PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 479
Query: 499 HDLLDEMRLAGVRTGSSV--YASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMI 556
+++ R ++ Y LL +ANR + L R+ G++ SS+Y ++
Sbjct: 480 FRQMEQQH----RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Query: 557 QSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQS 616
A +P ++ Q G + G DE T+ +L K+G++
Sbjct: 536 HGSC----------------NAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKA 579
Query: 617 ---------VDCGVHDW-------NNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFH 660
V CG W NVI C+ +D L++M S G P+ T+
Sbjct: 580 ERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWS 639
Query: 661 SMVTGY 666
++ +
Sbjct: 640 VLINCF 645
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 104/254 (40%), Gaps = 16/254 (6%)
Query: 475 FSNDNSALV--HVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAAD 532
F D S + HV+++ + + + + +M+ G Y LLKA C+ N+
Sbjct: 140 FGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDG 199
Query: 533 VASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLT 592
LL + G D+ SY +I S G +K +E+ E P VS N ++
Sbjct: 200 AKKLLVEMSNKGCCPDAVSYTTVISSMC----EVGLVKEGRELAERFEPVVSVYN-ALIN 254
Query: 593 KSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGH 652
E D + +++G S + V ++ +I+ C ++ A L +M G
Sbjct: 255 GLCKEHDYKGAFELMREMVEKGISPN--VISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 653 SPNAQTFHSMVTGYAAIGGKYLEVTELWGEM-KSLAXXXXXMKFDQELLDSVLYTFVRGG 711
PN T S+V G + G + +LW +M + + + ++++ F G
Sbjct: 313 HPNIYTLSSLVKG-CFLRGTTFDALDLWNQMIRGFGLQPNVVAY-----NTLVQGFCSHG 366
Query: 712 FFTRANEVVSMMEK 725
+A V S ME+
Sbjct: 367 NIVKAVSVFSHMEE 380
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 104/256 (40%), Gaps = 11/256 (4%)
Query: 474 PFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADV 533
P +D L+H S ++ A + + + G+ + Y+ L++ + + A+
Sbjct: 171 PCVDDLDQLLH---SLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGA 227
Query: 534 ASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTK 593
+ + + +D +Y A++ + D G K+FQEM + K + +
Sbjct: 228 RKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL-KPDAYSFAIFIH 286
Query: 594 SGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHS 653
+ + + K+L +K V V+ +N++I CK + DA L +M G +
Sbjct: 287 AYCDAGDVHSAYKVLDRMKRYDLVP-NVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGAN 345
Query: 654 PNAQTFHSMVTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFF 713
P+ T++S + Y + T+L M D+ + VL +R G F
Sbjct: 346 PDTWTYNS-IMAYHCDHCEVNRATKLLSRMDRTKCLP-----DRHTYNMVLKLLIRIGRF 399
Query: 714 TRANEVVSMMEKGKMF 729
RA E+ M + K +
Sbjct: 400 DRATEIWEGMSERKFY 415
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 24/257 (9%)
Query: 490 ISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQAN--RAADV-ASLLRDARKAGIQ 546
IS W D L + M+ G + S Y+S +K N +A ++ S+ ++ K +
Sbjct: 110 ISGRWQDLIQ-LFEWMQQHG-KISVSTYSSCIKFVGAKNVSKALEIYQSIPDESTKINVY 167
Query: 547 LDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKI-PKVSRQNP---GMLTKSGAETDEAT 602
+ +S ++++ L +KLF +MK + P V N G +
Sbjct: 168 ICNSILSCLVKNGKLD----SCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIE 223
Query: 603 LMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSM 662
L+ +L H + SV G V+ ++AE +++M+ GHSPN + S+
Sbjct: 224 LIGELPHNGIQMDSVMYGT-----VLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSL 278
Query: 663 VTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSM 722
+ Y+ G Y + EL EMKS+ ++ ++ ++L +++GG F R+ E++S
Sbjct: 279 LNSYSW-KGDYKKADELMTEMKSIGLVP-----NKVMMTTLLKVYIKGGLFDRSRELLSE 332
Query: 723 MEKGKMFIDKYKYRMLF 739
+E ++ Y ML
Sbjct: 333 LESAGYAENEMPYCMLM 349
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 99/222 (44%), Gaps = 7/222 (3%)
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
+P Y ++ A +A K ++ F + E+ + S +IN S L+
Sbjct: 263 FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSP--HIFCSLINGLGSEKKLND 320
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A + + + +G + Y +L+ AYC + R D + + R G+ ++ +Y+ ++
Sbjct: 321 ALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILH 380
Query: 558 SRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSV 617
+ + +K A +++Q M + P VS ++ + + + K+ E+K G+ V
Sbjct: 381 HLIRMQRSKEAYEVYQTM--SCEPTVSTYE--IMVRMFCNKERLDMAIKIWDEMK-GKGV 435
Query: 618 DCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTF 659
G+H ++++I C + + +A + +M +G P F
Sbjct: 436 LPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMF 477
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 95/474 (20%), Positives = 186/474 (39%), Gaps = 46/474 (9%)
Query: 231 PLIAMKPNTAAFNIALAGCLLFDTSRKAEQLLDMMPRIGVKADSNLLVTMARIYERNGRR 290
P KPN F I + G + K +LL+ M GV + + T+ + R GR
Sbjct: 174 PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRN 233
Query: 291 EELKKLQRHIEDAPNLTDIQFRQFYNCLLTCHLKFGDLDSASNMVLEM-----LGKAKQA 345
++ +K+ + + + DI +N ++ K G + AS + +M LG +
Sbjct: 234 DDSEKMVEKMREEGLVPDIVT---FNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP- 289
Query: 346 RNSLAAAKFINGAAKLDHNYFPGPASVHSLSNSEVMGSLENNQPIRSAFSSYEEFLKDRN 405
NS+ + G K+ S+ ++ + SL++ + +F++
Sbjct: 290 -NSITYNLMLKGFCKVGL-LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 406 FLQLEAE--------SNAVLGSLLAKLQKHVDLITT----KHGILQPTETIYVKLVKAFL 453
L+ + S +L L KL D T K + P Y L+ +
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 454 EANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTG 513
K D A LL+ ++ N + + +++S +G + +A +LL +M G
Sbjct: 408 SVGKV-DAAKSLLQEMMRNNCLPNAYTCNI-LLHSLWKMGRISEAEELLRKMNEKGYGLD 465
Query: 514 SSVYASLLKAYC---QANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALK 570
+ ++ C + ++A ++ +R A + +SY ++ +++ + L
Sbjct: 466 TVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI 525
Query: 571 LFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHF 630
+ + L K+G + L +++ E + SV +N IH
Sbjct: 526 TYSTLLNG------------LCKAGRFAEAKNLFAEMMGEKLQPDSVA-----YNIFIHH 568
Query: 631 FCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEMK 684
FCK+ + A + LK M G + +T++S++ G I + E+ L EMK
Sbjct: 569 FCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL-GIKNQIFEIHGLMDEMK 621
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 89/201 (44%), Gaps = 8/201 (3%)
Query: 485 VINSCISLGWLD-----QAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRD 539
V +C+ G+ D +A +LL++M G Y +++ C+ R +V L++
Sbjct: 313 VTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKK 372
Query: 540 -ARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAET 598
A++ G+ D +Y +I + AL ++ +E ++ + + + +
Sbjct: 373 MAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGF-RIDKLGYSAIVHALCKE 431
Query: 599 DEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQT 658
+ L++E+ V + V++ FC+ + A+K L+ M + GH PN +
Sbjct: 432 GRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVS 491
Query: 659 FHSMVTGYAAIGGKYLEVTEL 679
+ +++ G GK LE E+
Sbjct: 492 YTALLNGMCRT-GKSLEAREM 511
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 98/233 (42%), Gaps = 12/233 (5%)
Query: 439 QPTETIYVKLVKAFLEANKTKDLA-VFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
+P+ Y ++K F+E +K K+ VF + + SP D +I G ++
Sbjct: 213 EPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEK 272
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A + M GV + Y SL+ +V+ + +++ IQ D SY +I+
Sbjct: 273 ARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIK 329
Query: 558 SRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTK---SGAETDEATLMTKLLHEIKEG 614
+ + AL +F+EM +A + + +L SG T+ + +
Sbjct: 330 AYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD---- 385
Query: 615 QSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYA 667
+ + + ++ + M+ AEK K+++ G PN T+ +++ GYA
Sbjct: 386 -RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA 437
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/231 (19%), Positives = 106/231 (45%), Gaps = 8/231 (3%)
Query: 495 LDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEA 554
+D ++ M +GV+ +++ C+ L+++ GI+ ++ +Y
Sbjct: 205 IDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNT 264
Query: 555 MIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEG 614
+I + V Q D G + + MK+ + ++ +L + + + + KL E++E
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVV-YNKVTYTLLMELSVKNGKMSDAEKLFDEMRE- 322
Query: 615 QSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYL 674
+ ++ VH + ++I + C+K M+ A ++ G SP++ T+ +++ G + G+
Sbjct: 323 RGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKV-GEMG 381
Query: 675 EVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVSMMEK 725
L EM+S + Q + ++++ + R G A+ + +ME+
Sbjct: 382 AAEILMNEMQSKG-----VNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQ 427
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 114/284 (40%), Gaps = 42/284 (14%)
Query: 438 LQPTETIYVKLVKAFLEANKTKDLAVF--LLKAEREDSPFSNDNSALVHVINSCISLGWL 495
++P Y ++ A++ K +D + +LK ++D N + + ++ + G +
Sbjct: 255 IKPEAYTYNTIINAYV---KQRDFSGVEGVLKVMKKDGVVYNKVTYTL-LMELSVKNGKM 310
Query: 496 DQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAM 555
A L DEMR G+ + VY SL+ C+ L + + G+ S +Y A+
Sbjct: 311 SDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGAL 370
Query: 556 IQSRVLQEDTKGALKLFQEM--KEAKIPKV-------SRQNPGMLTKS----------GA 596
I + A L EM K I +V GM+ ++ G
Sbjct: 371 IDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGF 430
Query: 597 ETDEATLMT---------------KLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAE 641
+ D T T + L + EG V + N+I +CK+ +++A+
Sbjct: 431 QADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG-GVKLSTVSYTNLIDVYCKEGNVEEAK 489
Query: 642 KALKKMRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEMKS 685
+ +M S G PNA T++ M+ Y GK E +L M++
Sbjct: 490 RLFVEMSSKGVQPNAITYNVMIYAYCK-QGKIKEARKLRANMEA 532
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 27/203 (13%)
Query: 481 ALVHVIN----SCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASL 536
A +HV N +C G ++A LL EM GV Y +L+ YC+ + + S+
Sbjct: 201 ANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSV 260
Query: 537 LRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKE----------AKIPKVSRQ 586
++G+ + +Y + I + + A +LF+E+K+ I R
Sbjct: 261 QDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRM 320
Query: 587 NPGMLTKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKK 646
N + DEA L E+ E + GV +N+++ C+ +++A + L +
Sbjct: 321 N---------DIDEAL----RLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTE 367
Query: 647 MRSLGHSPNAQTFHSMVTGYAAI 669
M P+ T ++++ Y I
Sbjct: 368 MSGKKIEPDNITCNTLINAYCKI 390
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 98/233 (42%), Gaps = 12/233 (5%)
Query: 439 QPTETIYVKLVKAFLEANKTKDLA-VFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQ 497
+P+ Y ++K F+E +K K+ VF + + SP D +I G ++
Sbjct: 206 EPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEK 265
Query: 498 AHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQ 557
A + M GV + Y SL+ +V+ + +++ IQ D SY +I+
Sbjct: 266 ARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIK 322
Query: 558 SRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTK---SGAETDEATLMTKLLHEIKEG 614
+ + AL +F+EM +A + + +L SG T+ + +
Sbjct: 323 AYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD---- 378
Query: 615 QSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYA 667
+ + + ++ + M+ AEK K+++ G PN T+ +++ GYA
Sbjct: 379 -RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA 430
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 10/211 (4%)
Query: 478 DNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLL 537
D L ++S + + ++ +A +L +E GV+ + + +LL+ C+ + + S+
Sbjct: 185 DLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVF 244
Query: 538 RDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGM---LTKS 594
+A+K I DS SY MI + + K+ +EM E+ + L ++
Sbjct: 245 -NAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRT 303
Query: 595 GAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSP 654
G D + + H +G D V +N +I F R ++ + ++M P
Sbjct: 304 GRINDSVEIFDNIKH---KGNVPDANV--YNAMICNFISARDFDESMRYYRRMLDEECEP 358
Query: 655 NAQTFHSMVTGYAAIGGKYLEVTELWGEMKS 685
N +T+ +V+G G K + E++ EM S
Sbjct: 359 NLETYSKLVSGLIK-GRKVSDALEIFEEMLS 388
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 77/193 (39%), Gaps = 31/193 (16%)
Query: 493 GWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVA-SLLRDARKAGIQLDSSS 551
G + A+DL+++MR G + Y L++A C+ + D A + + + G + D +
Sbjct: 285 GKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVT 344
Query: 552 YEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEI 611
Y A+I + +M+ K G + T M ++
Sbjct: 345 YTALISGFCKWGMIDKGYSVLDDMR----------------KKGVMPSQVTYMQIMVAHE 388
Query: 612 KEGQSVDC----------GVHD----WNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQ 657
K+ Q +C G H +N VI CK +++A + +M + G SP
Sbjct: 389 KKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVD 448
Query: 658 TFHSMVTGYAAIG 670
TF M+ G+ + G
Sbjct: 449 TFVIMINGFTSQG 461
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 149/361 (41%), Gaps = 33/361 (9%)
Query: 238 NTAAFNIALAGCLLFDTSRKAEQLLDMMPRIGVKADSNLLVTMARIYERNGRREELKKLQ 297
+T N+ ++G + +A+++LD + K ++ Y + G +E ++
Sbjct: 505 DTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVK 564
Query: 298 RHIEDAPNLTDIQFRQFYNCLLTCHLKFGDLDSASNMVLEMLGKAKQARNSLAA-AKFIN 356
++E I+ YN L++ K+ L+ +++V+E+ +A+ ++A I
Sbjct: 565 EYMERKGIFPTIEM---YNTLISGAFKYRHLNKVADLVIEL--RARGLTPTVATYGALIT 619
Query: 357 G---AAKLDHNY------FPGPASVHSLSNSEVMGSLENNQPIRSA------FSSYEEFL 401
G +D Y +++ S++ SL I A ++ L
Sbjct: 620 GWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLL 679
Query: 402 KDRNFLQ--LEAESNAVLGSLLAKLQKHVDLITTKHGILQPTETIYVKLVKAFLEANKTK 459
L+ LEA + L + K+ + V+ T K +L P +Y + +A K +
Sbjct: 680 PGYQSLKEFLEASATTCLKT--QKIAESVENSTPKK-LLVPNNIVYNVAIAGLCKAGKLE 736
Query: 460 D---LAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSV 516
D L LL ++R F D +I+ C G +++A L DEM L G+
Sbjct: 737 DARKLFSDLLSSDR----FIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVT 792
Query: 517 YASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMK 576
Y +L+K C+ LL + GI ++ +Y +I V + A++L ++M
Sbjct: 793 YNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMI 852
Query: 577 E 577
E
Sbjct: 853 E 853
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:22598038-22601688 FORWARD LENGTH=1136
Length = 1136
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 20/258 (7%)
Query: 435 HGILQPTETIYVKLVKAFLEAN----KTKDLAVFLLKAEREDSPFSNDNSALVHVINSCI 490
+GIL P + LV E+N K L F+ + D N +I+ C
Sbjct: 823 NGIL-PDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN------MLISKCC 875
Query: 491 SLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSS 550
+ G ++ A DL+ M G+ +++ + +R + +L + K GI +S
Sbjct: 876 ANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 935
Query: 551 SYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGM---LTKSGAETDEATLMTKL 607
Y +I D K A + +EM KI + M L K G + DEATL+ +
Sbjct: 936 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCG-KADEATLLLRF 994
Query: 608 LHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYA 667
+ ++K ++ + ++H CK + +A + M + G + +++ ++TG
Sbjct: 995 MLKMKLVPTIA----SFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLC 1050
Query: 668 AIGGKYLEVTELWGEMKS 685
A G L EL+ EMK
Sbjct: 1051 AKGDMALAF-ELYEEMKG 1067
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 100/217 (46%), Gaps = 6/217 (2%)
Query: 468 AEREDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQA 527
AE DS +I S + LG L A DL + M GV+ VY SL+ + ++
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES 633
Query: 528 NRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAK-IPKVSRQ 586
+ R + G+Q + ++I++ + A +++ +MK+++ P V+
Sbjct: 634 GMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAAS 693
Query: 587 NPGMLTKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKK 646
N ML+ A+ + + + ++E + C V + +++ + ++ +A + ++
Sbjct: 694 N-SMLSLC-ADLGIVSEAESIFNALREKGT--CDVISFATMMYLYKGMGMLDEAIEVAEE 749
Query: 647 MRSLGHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEM 683
MR G + +F+ ++ YAA G+ E EL+ EM
Sbjct: 750 MRESGLLSDCTSFNQVMACYAA-DGQLSECCELFHEM 785
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 104/234 (44%), Gaps = 11/234 (4%)
Query: 495 LDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEA 554
+ + D+M+ V Y+ L+ YC+ NR LL + + G ++Y +
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCS 449
Query: 555 MIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIK-E 613
+I + + + A +LF+E+KE VS + ++ K + + + L +E+K +
Sbjct: 450 LINALGKAKRYEAANELFKELKE-NFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQ 508
Query: 614 GQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGGKY 673
G D V+ +N ++ K ++ +A L+KM G + + + ++ G+A G
Sbjct: 509 GSGPD--VYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPR 566
Query: 674 LEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVV-SMMEKG 726
+ E++ +K +K D +++L F G F A ++ M +KG
Sbjct: 567 RAI-EMFETIKH-----SGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 83/450 (18%), Positives = 177/450 (39%), Gaps = 39/450 (8%)
Query: 236 KPNTAAFNIALAGCLLFDTSRKAEQLLDMMPRIG-VKADSNLLVTMARIYERNGRREELK 294
KP ++ +N + + K ++ M G D+ + YE+ GR +
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253
Query: 295 KLQRHIED---APNLTDIQFRQFYNCLLTCHLKFGDLDSASNMVLEM--LGKAKQARNSL 349
+L ++D P + Y LL + K G ++ A ++ EM G +
Sbjct: 254 RLFDEMKDNCMQPT------EKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYT 307
Query: 350 AAAKFINGAAKLDHNY-----------FPGPASVHSLSNSEVMGSLENNQPIRSAFSSYE 398
K + A ++D Y P +++L N ++G + + + + FS
Sbjct: 308 ELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN--ILGKVGRVEELTNVFSEMG 365
Query: 399 EFLKDRNFLQLEAESNAVLGSLLAKLQKHVDLITT-----KHGILQPTETIYVKLVKAFL 453
+ + N V+ +L + HV +++ K + P+E Y L+ +
Sbjct: 366 MWRCTPTVVSY----NTVIKALFES-KAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYC 420
Query: 454 EANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLGWLDQAHDLLDEMRLAGVRTG 513
+ N+ + LL E ++ F +A +IN+ + A++L E++
Sbjct: 421 KTNRVE--KALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVS 478
Query: 514 SSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQ 573
S VYA ++K + + + ++ L + + G D +Y A++ V A L +
Sbjct: 479 SRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLR 538
Query: 574 EMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCK 633
+M+E + + ++ A T ++ IK GV +N ++ F
Sbjct: 539 KMEENGC-RADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGV-TYNTLLGCFAH 596
Query: 634 KRLMQDAEKALKKMRSLGHSPNAQTFHSMV 663
+ ++A + +++M+ G +A T+ S++
Sbjct: 597 AGMFEEAARMMREMKDKGFEYDAITYSSIL 626
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 179/468 (38%), Gaps = 88/468 (18%)
Query: 83 IENAIDENQLDYSWKLFEQHMHMDGFPRKSVFNKLVTSYVESLDTQWLRKAYELEERAIE 142
I D +LD LF++ + P +N L+ + + L++A E+ E IE
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK---LGQLKEASEIFEFMIE 310
Query: 143 EGKHDLLEKEVLIYLSL--GLAKAGLPVLASTILRKMIGMGHFPRVTAWSAVLANMSQTA 200
G + V Y L GL G A +L MI P ++ ++ + +
Sbjct: 311 RG----VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK-- 364
Query: 201 DGSYLAAELILEIGYMFQNNRVDPRKKSNAPLIAMKPNTAAFNIALAGCLLFDTSRKAEQ 260
DG L A+ + EI + + R +P+ +NI L G +A +
Sbjct: 365 DG--LVADAV-EIVELMKKRRT-------------RPDNITYNILLGGLCAKGDLDEASK 408
Query: 261 LLDMMPRIGVKADSNLLVTMARIYERNGRREELKKLQRHIEDAPNLTDIQF-------RQ 313
LL +M + D +++ A I+ G +E + A ++ D+ R
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIH---GLCKE-----NRLHQALDIYDLLVEKLGAGDRV 460
Query: 314 FYNCLLTCHLKFGDLDSASNMVLEMLGKAKQARNSLAAAKFINGAAKLDH-NYFPGPASV 372
N LL LK GD++ A + + + +K RNS I+G K N G
Sbjct: 461 TTNILLNSTLKAGDVNKAMEL-WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCK 519
Query: 373 HSLSNSE--------VMGSLENNQPIRSAFSSYEEFLKDRNFLQLEAESNAVLGSLLAKL 424
+S + ++ SL + A+ +EE +D NF + + + + GSL
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL---- 575
Query: 425 QKHVDLITTKHGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVH 484
K G ++ E++ V + +A L SP D
Sbjct: 576 ---------KAGDIKSAESLLVGMSRAGL-------------------SP---DLFTYSK 604
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAAD 532
+IN + LG+LD+A D+M +G + + S+LK YC + D
Sbjct: 605 LINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK-YCISQGETD 651
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 8/189 (4%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
+I++ G +D+A L EM+ G+ VY SL++ +C +L + + G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGM---LTKSGAETDEA 601
+ +Y +I+ K A ++F+ M E + G+ L G +
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337
Query: 602 TLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHS 661
L+ ++ + +E +V +N +I+ CK L+ DA + ++ M+ P+ T++
Sbjct: 338 QLLNLMIEKDEEPNAV-----TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 662 MVTGYAAIG 670
++ G A G
Sbjct: 393 LLGGLCAKG 401
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 84/207 (40%), Gaps = 32/207 (15%)
Query: 493 GWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRD-ARKAGIQLDSSS 551
G + AH L DEM + +LL AY + + + ++ K GI D +
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVT 195
Query: 552 YEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKL---- 607
Y MI++ + L +F+E L K+G E D + T L
Sbjct: 196 YNTMIKALCRKGSMDDILSIFEE----------------LEKNGFEPDLISFNTLLEEFY 239
Query: 608 ----------LHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQ 657
+ ++ + +++ + +N+ + + + DA + M++ G SP+
Sbjct: 240 RRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVH 299
Query: 658 TFHSMVTGYAAIGGKYLEVTELWGEMK 684
T+++++T Y + EV + + EMK
Sbjct: 300 TYNALITAY-RVDNNLEEVMKCYNEMK 325
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 28/247 (11%)
Query: 481 ALVHVINSCISLGWL------DQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVA 534
A V V N+ +S WL D+A +LL +M G+ Y +++ +C+ + D+A
Sbjct: 441 ANVFVCNTILS--WLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCR-QKNMDLA 497
Query: 535 SLL-RDARKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIP---KVSRQNPGM 590
++ + + G++ ++ +Y +I D + AL++ M + I V +
Sbjct: 498 RIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIING 557
Query: 591 LTKSGAETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSL 650
L K G + L+ ++ E + V C +N++I F K+ M A A ++M
Sbjct: 558 LCKVGQTSKARELLANMIEEKR--LCVSC--MSYNSIIDGFFKEGEMDSAVAAYEEMCGN 613
Query: 651 GHSPNAQTFHSMVTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRG 710
G SPN T+ S++ G + + E+ EMK+ LD Y +
Sbjct: 614 GISPNVITYTSLMNGLCK-NNRMDQALEMRDEMKNKGVK----------LDIPAYGALID 662
Query: 711 GFFTRAN 717
GF R+N
Sbjct: 663 GFCKRSN 669
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 103/267 (38%), Gaps = 49/267 (18%)
Query: 439 QPTETIYVKLVKAFLEANKTKDLAVF--LLKAEREDSPFSNDNSALVHVINSCISLGWLD 496
+P +Y V+A KT DLA+ LL+ +E VI + + G +D
Sbjct: 265 EPDSLLYSLAVQA---CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD 321
Query: 497 QAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSYEAMI 556
A L DEM G+ SL+ +C+ N L K G +S ++ +I
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 557 Q------------------------------SRVLQEDTKG-----ALKLFQEMKEAKIP 581
+ ++Q KG ALKLF E E +
Sbjct: 382 EWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA 441
Query: 582 KVSRQNPGM--LTKSGAETDEAT-LMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQ 638
V N + L K G +TDEAT L++K+ E + + V +NNV+ C+++ M
Sbjct: 442 NVFVCNTILSWLCKQG-KTDEATELLSKM-----ESRGIGPNVVSYNNVMLGHCRQKNMD 495
Query: 639 DAEKALKKMRSLGHSPNAQTFHSMVTG 665
A + G PN T+ ++ G
Sbjct: 496 LARIVFSNILEKGLKPNNYTYSILIDG 522
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 105/246 (42%), Gaps = 14/246 (5%)
Query: 485 VINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAG 544
VI++ G + +AHD+ +M +G + + +L++ + +A R V + +K G
Sbjct: 296 VIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLG 355
Query: 545 IQLDSSSYEAMIQSRVLQEDTKGALKLFQEM--KEAKIPKVSRQNPGMLTKSGAETDEAT 602
+ D+ +Y +I++ E+ + A+K+ M K+ ++ + + + + A
Sbjct: 356 CEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAH 415
Query: 603 LMTKLLHEIK-EGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHS 661
M + E K E +V +N ++ F + K K+M PN T+
Sbjct: 416 RMYSKMMEAKCEPNTVT-----YNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRL 470
Query: 662 MVTGYAAIGGKYLEVTELWGEMKSLAXXXXXMKFDQELLDSVLYTFVRGGFFTRANEVVS 721
+VT + + G + +L+ EM + L + VL R G + E+V
Sbjct: 471 LVTMFCGM-GHWNNAYKLFKEM----VEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVE 525
Query: 722 -MMEKG 726
M++KG
Sbjct: 526 KMIQKG 531
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 132/314 (42%), Gaps = 21/314 (6%)
Query: 380 VMGSLENNQPIRSAFSSYEEFLKDRNFLQL-EAESNAVLGSLLAKLQKHVDL-ITTKHGI 437
+MG+ E++ S + LKD N L +++S +++ + L K K VD+ +T H I
Sbjct: 412 LMGNYESD-----GVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANK-VDMAVTLLHDI 465
Query: 438 LQ----PTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNSALVHVINSCISLG 493
+Q P +Y +++ + ++++ L E +D+ L + I C++
Sbjct: 466 VQNGLIPGPMMYNNIIEGMCKEGRSEESLKLL--GEMKDAGVEPSQFTL-NCIYGCLAER 522
Query: 494 W-LDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLDSSSY 552
A DLL +MR G L+K C+ RA D L D G +
Sbjct: 523 CDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVAS 582
Query: 553 EAMIQSRVLQEDTKGALKLFQEM-KEAKIPKVSRQNPGMLTKSGAETDEATLMTKLLHEI 611
A I + E L+LF+++ P V + +L K+ + T+ +L
Sbjct: 583 TAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYH--VLIKALCKACR-TMEADILFNE 639
Query: 612 KEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNAQTFHSMVTGYAAIGG 671
+ + V +N++I +CK+ + + +M +P+ T+ S++ G A G
Sbjct: 640 MVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCA-SG 698
Query: 672 KYLEVTELWGEMKS 685
+ E W EMK
Sbjct: 699 RPSEAIFRWNEMKG 712
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 111/266 (41%), Gaps = 38/266 (14%)
Query: 431 ITTKHGILQPTETIYVKLVKAFLEANKTKDLAVF--LLKAEREDSPFSNDNSALVHVINS 488
+T KH P Y L+K K KDL V + R+D D + +I++
Sbjct: 185 LTEKHS--PPDTYTYNFLLKHLC---KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 489 CISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDARKAGIQLD 548
+ L +A L+ ++ AG + +Y +++K +C ++ ++ + + ++ G++ D
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 549 SSSYEAMIQSRVLQEDTKGALKLFQEMKEAKIPKVSRQNPGMLTKSGAETDEATLMTKLL 608
+Y +I F K ++ + +R + +G E D AT + +
Sbjct: 300 QITYNTLI---------------FGLSKAGRVEE-ARMYLKTMVDAGYEPDTATYTSLMN 343
Query: 609 HEIKEGQSV------------DCGVHD--WNNVIHFFCKKRLMQDAEKALKKMRSLGHSP 654
++G+S+ C +D +N ++H CK RLM + + M+S G
Sbjct: 344 GMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKL 403
Query: 655 NAQTFHSMVTGYAAIGGKYLEVTELW 680
+ + ++V GK E E++
Sbjct: 404 ESNGYATLVRSLVK-SGKVAEAYEVF 428
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 104/254 (40%), Gaps = 12/254 (4%)
Query: 421 LAKLQKHVDLITTKHGILQPTETIYVKLVKAFLEANKTKDLAVFLLKAEREDSPFSNDNS 480
L + K V ++ QP Y L+ F + N+ D L + +D FS D
Sbjct: 137 LRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD--FSPDTV 194
Query: 481 ALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCQANRAADVASLLRDA 540
+I S S G LD A +L+++ + Y L++A + L+ +
Sbjct: 195 TYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM 254
Query: 541 RKAGIQLDSSSYEAMIQSRVLQEDTKGALKLFQ--EMKEAKIPKVSRQNPGM--LTKSGA 596
G++ D +Y +I+ + A ++ + E+K + P V N + L G
Sbjct: 255 LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCE-PDVISYNILLRALLNQGK 313
Query: 597 ETDEATLMTKLLHEIKEGQSVDCGVHDWNNVIHFFCKKRLMQDAEKALKKMRSLGHSPNA 656
+ LMTK+ E D V ++ +I C+ +++A LK M+ G +P+A
Sbjct: 314 WEEGEKLMTKMFSE-----KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
Query: 657 QTFHSMVTGYAAIG 670
++ ++ + G
Sbjct: 369 YSYDPLIAAFCREG 382