Miyakogusa Predicted Gene

Lj5g3v0998700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0998700.1 tr|A9SV66|A9SV66_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_188742,34.62,5e-18,Kelch motif,NULL; Kelch_1,Kelch
repeat type 1; no description,Galactose oxidase, beta-propeller;
SUB,NODE_60282_length_971_cov_46.759010.path2.1
         (166 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G63220.2 | Symbols:  | Galactose oxidase/kelch repeat superfa...   246   5e-66
AT3G63220.1 | Symbols:  | Galactose oxidase/kelch repeat superfa...   246   6e-66

>AT3G63220.2 | Symbols:  | Galactose oxidase/kelch repeat
           superfamily protein | chr3:23357540-23358598 REVERSE
           LENGTH=352
          Length = 352

 Score =  246 bits (628), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 113/166 (68%), Positives = 133/166 (80%)

Query: 1   MYDPEKDVWIPMPDLHRTHNSACSGVMIGGKVHVLHKDMSTVQVLDNAGAGWIVEDCGWF 60
           MYDPE DVW  +PDLH+THNSACSG+++ GKVHVLHK +STVQVL++   GW V+D GW 
Sbjct: 187 MYDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWP 246

Query: 61  QSPMAVVQDALYVMSHGLIHKQEKDVRKVVGSASEFRRRIGFGMIGLGNELYVIGGFIGP 120
           Q PM VV+D LYVMSHGL+ KQE D  K+V SASEF+RRIG  M  L +E+ ++GG IGP
Sbjct: 247 QGPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGP 306

Query: 121 DRLNWDLKPLSDVDVLTLGNERPTWRQAAPMTRCRGTIFGCTLLRI 166
           DRLNWD+KPLSDVD LT+GN+RP WR  APMTRCRGTI GCT L I
Sbjct: 307 DRLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 352


>AT3G63220.1 | Symbols:  | Galactose oxidase/kelch repeat
           superfamily protein | chr3:23357540-23358577 REVERSE
           LENGTH=345
          Length = 345

 Score =  246 bits (627), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 113/166 (68%), Positives = 133/166 (80%)

Query: 1   MYDPEKDVWIPMPDLHRTHNSACSGVMIGGKVHVLHKDMSTVQVLDNAGAGWIVEDCGWF 60
           MYDPE DVW  +PDLH+THNSACSG+++ GKVHVLHK +STVQVL++   GW V+D GW 
Sbjct: 180 MYDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWP 239

Query: 61  QSPMAVVQDALYVMSHGLIHKQEKDVRKVVGSASEFRRRIGFGMIGLGNELYVIGGFIGP 120
           Q PM VV+D LYVMSHGL+ KQE D  K+V SASEF+RRIG  M  L +E+ ++GG IGP
Sbjct: 240 QGPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGP 299

Query: 121 DRLNWDLKPLSDVDVLTLGNERPTWRQAAPMTRCRGTIFGCTLLRI 166
           DRLNWD+KPLSDVD LT+GN+RP WR  APMTRCRGTI GCT L I
Sbjct: 300 DRLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 345