Miyakogusa Predicted Gene

Lj5g3v0975690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0975690.1 tr|I1L835|I1L835_SOYBN Mitochondrial Rho GTPase
OS=Glycine max GN=Gma.19679 PE=3 SV=1,81.8,0,seg,NULL; P-loop
containing nucleoside triphosphate hydrolases,NULL; EF-hand,NULL;
EF_assoc_2,EF han,CUFF.54449.1
         (496 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO-related GTP-ase 2 | c...   584   e-167
AT5G27540.2 | Symbols: MIRO1 | MIRO-related GTP-ase 1 | chr5:972...   563   e-161
AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO-related GTP-ase 1 |...   563   e-161
AT3G05310.1 | Symbols: MIRO3 | MIRO-related GTP-ase 3 | chr3:151...   469   e-132

>AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO-related GTP-ase 2 |
           chr3:23329200-23332692 REVERSE LENGTH=643
          Length = 643

 Score =  584 bits (1506), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 274/497 (55%), Positives = 365/497 (73%), Gaps = 4/497 (0%)

Query: 1   MIQFREIATCIECSAATLYQVPEVFYFAQRAVLHPVDPLYDYREHALTGRCLRALRRIFV 60
           M ++REI TCIECSA TL QVP+VFYFA +AVLHP  PL+D  +  L  R  RA++RIF 
Sbjct: 146 MKEYREIETCIECSALTLIQVPDVFYFASKAVLHPTFPLFDQEKQCLKPRLRRAVQRIFN 205

Query: 61  VCDQNMDGALSDAELNEFQVKCFNKPLQPSEVAKIKTIIQQKVPEGVNSHGLTFPGFIFV 120
           +CD ++DGAL+DAELN+FQV CF  PL P E+  +K ++Q++ P+GV   GLT PGF+F+
Sbjct: 206 LCDHDLDGALNDAELNDFQVNCFGAPLDPVELMGVKKVVQERQPDGVTDLGLTLPGFLFL 265

Query: 121 HDMFLKRGRIEAFWAVLRKFGYDNDLKLQDDFLPVPSKQASDQSVELTSEAVEFLNGIFR 180
             +F++RGR E  WA+LRK GY++ L+L  + LPVP+KQ+ DQS+ELT+EA++FL+GIF+
Sbjct: 266 FSLFIERGRPETAWAILRKCGYNDSLELHAELLPVPAKQSPDQSIELTNEAMDFLSGIFQ 325

Query: 181 LLDTDKDRSLRPAEVDKLFDVAPESPWNDAPYKDVAEKNDMGYITLNGFLSQWALMTLLD 240
           L D D D +L+PAE+D LF  AP+SPW + PYK+ AEK   G +T+NGFLS+WALMTLLD
Sbjct: 326 LYDLDNDGALQPAELDDLFQTAPDSPWLEDPYKEAAEKTPGGSLTINGFLSEWALMTLLD 385

Query: 241 PPRSLANLIYIGYSGNPXXXXXXXXXXXXXXKKQKTERNVFQCYVFGSKNAGKSALLYSL 300
           P +SLANL YIGY  +P              KKQ+TERNVFQC+VFG K +GKSALL S 
Sbjct: 386 PRKSLANLTYIGYGHDPASTFSVTRKRSVDRKKQRTERNVFQCFVFGPKKSGKSALLDSF 445

Query: 301 LGRPFSKNYTPTTVEQYATNVIELIGGAKKILILHEIPEDGISNFLSNKDCLAACDVAAF 360
           LGR FS +Y  T  E+YA NVI+  GG+KK LIL EIPED +  FL+NK+ LAACDVA  
Sbjct: 446 LGRKFSNSYKATMGERYAANVIDQPGGSKKTLILREIPEDRVKKFLTNKESLAACDVAVV 505

Query: 361 VYDSSDEYSWKKSIDFLEKVVRQGEITGYRVPCLLIAAKDDLTPFPRALLDSAKVTQELG 420
           VYDSSD YSW+K+ + L +V R+GE  GY  PCLL+AAKDDL P+P ++ +S +V  ELG
Sbjct: 506 VYDSSDVYSWRKAREILMEVARRGEERGYGTPCLLVAAKDDLDPYPMSVQESDRVCMELG 565

Query: 421 IEAPIHVSMKLGDSNSVYNKIVNAAEHPHLSIPETEAARKRNQFQQI----LIYGLVGVA 476
           I+ P+ +SMKLG+ NS++++IV+ AE+PH+SIPETE+ R+    +Q+    L++  VG A
Sbjct: 566 IDIPVSLSMKLGEPNSLFSRIVSTAENPHMSIPETESGRRSRNIRQLVNSSLLFVSVGTA 625

Query: 477 MAIVGVTASRARAVKKN 493
           +   G+ A RA + +KN
Sbjct: 626 VGFAGLAAYRAYSARKN 642


>AT5G27540.2 | Symbols: MIRO1 | MIRO-related GTP-ase 1 |
           chr5:9722816-9727112 FORWARD LENGTH=648
          Length = 648

 Score =  563 bits (1452), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 257/478 (53%), Positives = 348/478 (72%), Gaps = 2/478 (0%)

Query: 1   MIQFREIATCIECSAATLYQVPEVFYFAQRAVLHPVDPLYDYREHALTGRCLRALRRIFV 60
           M QFREI TCIECSA    Q  EVFY+AQ+ VLHP  PL+D    AL  RC+RAL+RIF+
Sbjct: 149 MQQFREIETCIECSALKQLQAQEVFYYAQKTVLHPTGPLFDQDSQALKPRCVRALKRIFI 208

Query: 61  VCDQNMDGALSDAELNEFQVKCFNKPLQPSEVAKIKTIIQQKVPEGVNSHGLTFPGFIFV 120
           +CD + DGALS+AELN+FQVKCF+ PLQPSE+  +K ++Q+K+PEGVN  GLT  GF+F+
Sbjct: 209 LCDHDRDGALSEAELNDFQVKCFHAPLQPSEIEGVKRVVQEKLPEGVNERGLTVTGFLFL 268

Query: 121 HDMFLKRGRIEAFWAVLRKFGYDNDLKLQDDFLPVPS-KQASDQSVELTSEAVEFLNGIF 179
           H +F+++GR+E  W VLRKFGY+ND++L ++ LP    K+A DQS ELT+ A++FL G++
Sbjct: 269 HALFIEKGRLETTWTVLRKFGYNNDIRLAEELLPSAIFKRAPDQSFELTNAAIDFLKGMY 328

Query: 180 RLLDTDKDRSLRPAEVDKLFDVAPESPWNDAPYKDVAEKNDMGYITLNGFLSQWALMTLL 239
            L D D+D +LRP E++ LF  APESPW +APY+D AEK  +G ++ + FLS W+LMTLL
Sbjct: 329 MLFDDDQDNNLRPQEIEDLFSTAPESPWKEAPYEDAAEKTALGGLSFDAFLSMWSLMTLL 388

Query: 240 DPPRSLANLIYIGYSGNPXXXXXXXXXXXXXXKKQKTERNVFQCYVFGSKNAGKSALLYS 299
           +P RS+ NLIYIG+ G+P              KKQ+ ER VFQC+VFG  NAGKSALL  
Sbjct: 389 EPARSVENLIYIGFPGDPSTAIRVTRRRRLDRKKQQCERKVFQCFVFGPNNAGKSALLNC 448

Query: 300 LLGRPFSKNYTPTTVEQYATNVIELIGGAKKILILHEIPEDGISNFLSNKDCLAACDVAA 359
            LGR ++ N   TT E+YA N+++   GAKK LI+ EIPEDG+    S+K+ LAACD+A 
Sbjct: 449 FLGRSYTDNQESTTDERYAVNMVDE-SGAKKTLIMREIPEDGVQGLFSSKESLAACDIAV 507

Query: 360 FVYDSSDEYSWKKSIDFLEKVVRQGEITGYRVPCLLIAAKDDLTPFPRALLDSAKVTQEL 419
           FVYDSSDE SWK++   L +V   GE TGY VPCL+++AKDDL   P ++ +S ++TQ++
Sbjct: 508 FVYDSSDESSWKRATQLLVEVANYGEATGYEVPCLMVSAKDDLDSSPISIQESTRMTQDM 567

Query: 420 GIEAPIHVSMKLGDSNSVYNKIVNAAEHPHLSIPETEAARKRNQFQQILIYGLVGVAM 477
           GIE P+ +S KLGD N+++ KI+ AA+HPHLSIPETEA + R  + +++   L+ V++
Sbjct: 568 GIEPPVSISSKLGDFNNLFRKILTAAQHPHLSIPETEAGKSRKHYNRLINRSLMAVSI 625


>AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO-related GTP-ase 1 |
           chr5:9722816-9727112 FORWARD LENGTH=648
          Length = 648

 Score =  563 bits (1452), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 257/478 (53%), Positives = 348/478 (72%), Gaps = 2/478 (0%)

Query: 1   MIQFREIATCIECSAATLYQVPEVFYFAQRAVLHPVDPLYDYREHALTGRCLRALRRIFV 60
           M QFREI TCIECSA    Q  EVFY+AQ+ VLHP  PL+D    AL  RC+RAL+RIF+
Sbjct: 149 MQQFREIETCIECSALKQLQAQEVFYYAQKTVLHPTGPLFDQDSQALKPRCVRALKRIFI 208

Query: 61  VCDQNMDGALSDAELNEFQVKCFNKPLQPSEVAKIKTIIQQKVPEGVNSHGLTFPGFIFV 120
           +CD + DGALS+AELN+FQVKCF+ PLQPSE+  +K ++Q+K+PEGVN  GLT  GF+F+
Sbjct: 209 LCDHDRDGALSEAELNDFQVKCFHAPLQPSEIEGVKRVVQEKLPEGVNERGLTVTGFLFL 268

Query: 121 HDMFLKRGRIEAFWAVLRKFGYDNDLKLQDDFLPVPS-KQASDQSVELTSEAVEFLNGIF 179
           H +F+++GR+E  W VLRKFGY+ND++L ++ LP    K+A DQS ELT+ A++FL G++
Sbjct: 269 HALFIEKGRLETTWTVLRKFGYNNDIRLAEELLPSAIFKRAPDQSFELTNAAIDFLKGMY 328

Query: 180 RLLDTDKDRSLRPAEVDKLFDVAPESPWNDAPYKDVAEKNDMGYITLNGFLSQWALMTLL 239
            L D D+D +LRP E++ LF  APESPW +APY+D AEK  +G ++ + FLS W+LMTLL
Sbjct: 329 MLFDDDQDNNLRPQEIEDLFSTAPESPWKEAPYEDAAEKTALGGLSFDAFLSMWSLMTLL 388

Query: 240 DPPRSLANLIYIGYSGNPXXXXXXXXXXXXXXKKQKTERNVFQCYVFGSKNAGKSALLYS 299
           +P RS+ NLIYIG+ G+P              KKQ+ ER VFQC+VFG  NAGKSALL  
Sbjct: 389 EPARSVENLIYIGFPGDPSTAIRVTRRRRLDRKKQQCERKVFQCFVFGPNNAGKSALLNC 448

Query: 300 LLGRPFSKNYTPTTVEQYATNVIELIGGAKKILILHEIPEDGISNFLSNKDCLAACDVAA 359
            LGR ++ N   TT E+YA N+++   GAKK LI+ EIPEDG+    S+K+ LAACD+A 
Sbjct: 449 FLGRSYTDNQESTTDERYAVNMVDE-SGAKKTLIMREIPEDGVQGLFSSKESLAACDIAV 507

Query: 360 FVYDSSDEYSWKKSIDFLEKVVRQGEITGYRVPCLLIAAKDDLTPFPRALLDSAKVTQEL 419
           FVYDSSDE SWK++   L +V   GE TGY VPCL+++AKDDL   P ++ +S ++TQ++
Sbjct: 508 FVYDSSDESSWKRATQLLVEVANYGEATGYEVPCLMVSAKDDLDSSPISIQESTRMTQDM 567

Query: 420 GIEAPIHVSMKLGDSNSVYNKIVNAAEHPHLSIPETEAARKRNQFQQILIYGLVGVAM 477
           GIE P+ +S KLGD N+++ KI+ AA+HPHLSIPETEA + R  + +++   L+ V++
Sbjct: 568 GIEPPVSISSKLGDFNNLFRKILTAAQHPHLSIPETEAGKSRKHYNRLINRSLMAVSI 625


>AT3G05310.1 | Symbols: MIRO3 | MIRO-related GTP-ase 3 |
           chr3:1510160-1513301 FORWARD LENGTH=648
          Length = 648

 Score =  469 bits (1208), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 236/506 (46%), Positives = 335/506 (66%), Gaps = 15/506 (2%)

Query: 1   MIQFREIATCIECSAATLYQVPEVFYFAQRAVLHPVDPLYDYREHALTGRCLRALRRIFV 60
           M Q+RE+ T I+ SA  L Q  +V Y+AQ+AV+ PV P++D   + L  RC+ AL+RIF+
Sbjct: 146 MKQYREVETSIQWSAQRLDQAKDVLYYAQKAVIDPVGPVFDQENNVLKPRCIAALKRIFL 205

Query: 61  VCDQNMDGALSDAELNEFQVKCFNKPLQPSEVAKIKTIIQQKVPEGVNSHGLTFPGFIFV 120
           + D NMDG LSD ELNE Q KCF+ PL P E+ ++K ++Q   P+GVN  GLT  GF+F+
Sbjct: 206 LSDHNMDGILSDEELNELQKKCFDTPLVPCEIKQMKNVMQVTFPQGVNERGLTLDGFLFL 265

Query: 121 HDMFLKRGRIEAFWAVLRKFGYDNDLKLQDDFLPVPS-KQASDQSVELTSEAVEFLNGIF 179
           +   ++  RI+  W +LRKFGY NDL+L DD +P  S K+ +DQSVELT+ A+EFL  ++
Sbjct: 266 NTRLIEEARIQTLWTMLRKFGYSNDLRLGDDLVPYSSFKRQADQSVELTNVAIEFLREVY 325

Query: 180 RLLDTDKDRSLRPAEVDKLFDVAPESPWNDAPYKDVAEKNDMGYITLNGFLSQWALMTLL 239
              D++ D +L P E+  LF+ APESPW    YKDV E+N  G ++L  FLS W+LMTL+
Sbjct: 326 EFFDSNGDNNLEPHEMGYLFETAPESPWTKPLYKDVTEENMDGGLSLEAFLSLWSLMTLI 385

Query: 240 DPPRSLANLIYIGY-SGNPXXXXXXXXXXXXXXKKQKTERNVFQCYVFGSKNAGKSALLY 298
           DPPRSL  L+YI + S +P              K++K+ER V QC+VFG KNAGKSALL 
Sbjct: 386 DPPRSLEYLMYIRFPSDDPSSAVRVTRKRVLDRKEKKSERKVVQCFVFGPKNAGKSALLN 445

Query: 299 SLLGRPF---SKNYTPTTVEQYATNVIE---LIGGAKKILILHE--IPEDGISNFLSNKD 350
             +GR +   S N   +T E YA N+++   +I    K L+L E  I +DG   F+ +K+
Sbjct: 446 QFIGRSYDDDSNNNNGSTDEHYAVNMVKEPGVISDTDKTLVLKEVRIKDDG---FMLSKE 502

Query: 351 CLAACDVAAFVYDSSDEYSWKKSIDFLEKVVRQGEITGYRVPCLLIAAKDDLTPFPRALL 410
            LAACDVA F+YDSSDEYSW +++D L +V    + +GY  PCL++AAK DL PFP A+ 
Sbjct: 503 ALAACDVAIFIYDSSDEYSWNRAVDMLAEVATIAKDSGYVFPCLMVAAKTDLDPFPVAIQ 562

Query: 411 DSAKVTQELGIEAPIHVSMKLGDSNSVYNKIVNAAEHPHLSIPETEAARKRN--QFQQIL 468
           +S +VTQ++GI+API +S KLGD ++++ KI+ AAE+PHL+IPE E+ +KR+     + L
Sbjct: 563 ESTRVTQDIGIDAPIPISSKLGDVSNLFRKILTAAENPHLNIPEIESKKKRSCKLNNRSL 622

Query: 469 IYGLVGVAMAIVGVTASRARAVKKNT 494
           +   +G A+ I G+ + R    +K +
Sbjct: 623 MAVSIGTAVLIAGLASFRLYTARKQS 648