Miyakogusa Predicted Gene

Lj5g3v0963130.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0963130.1 Non Chatacterized Hit- tr|G7IEF2|G7IEF2_MEDTR
Isomerase, putative OS=Medicago truncatula GN=MTR_1g07,70.86,0,no
description,NULL; SUBFAMILY NOT NAMED,Phenazine biosynthesis PhzF
protein; PHENAZINE BIOSYNTHESIS,CUFF.54404.1
         (288 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G03210.1 | Symbols:  | Phenazine biosynthesis PhzC/PhzF prote...   335   2e-92
AT4G02860.1 | Symbols:  | Phenazine biosynthesis PhzC/PhzF prote...   325   3e-89
AT4G02850.1 | Symbols:  | phenazine biosynthesis PhzC/PhzF famil...   294   5e-80

>AT1G03210.1 | Symbols:  | Phenazine biosynthesis PhzC/PhzF protein
           | chr1:782948-784240 FORWARD LENGTH=286
          Length = 286

 Score =  335 bits (859), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 169/291 (58%), Positives = 213/291 (73%), Gaps = 13/291 (4%)

Query: 3   KKPLKYYVVDAFTDSAFKGNPAAVCLLEED--KDDAWLQALAAEFNITATCYLTRIHYSL 60
           KK +KY++VDAF +SAFKGNPAAVC LE+D  +DDAWLQ+LA EFNI+ TC+LT I   L
Sbjct: 4   KKRVKYFIVDAFAESAFKGNPAAVCFLEDDNERDDAWLQSLATEFNISETCFLTPIIGDL 63

Query: 61  NGASINPCFRLRWFSPLTEAKLCGHATLAAAHALFSSGLVDTSNIEFVTLSGLLTAKKIS 120
                 P FRLRWF+P+ E  LCGHATLA+AH LFS+GLV +  +EF TLSG+LTAK + 
Sbjct: 64  ------PRFRLRWFTPVAEVDLCGHATLASAHVLFSTGLVGSETVEFDTLSGILTAKHLK 117

Query: 121 NLEKGE-AHIELDFPADPIEELNF--DGTEQISVALKGASIVDIKRTHNVDDLLVEVTSA 177
           N + GE + IELDFP  P  E+N+  D     S AL GA+I+D+K T    DLLV ++S 
Sbjct: 118 NDDDGEESSIELDFPVVPTYEVNYIDDDLSLFSKALNGATILDVKATKK--DLLVVLSSW 175

Query: 178 NNIIEVEPQYDEIVKCPGRGIIVSGIAPPKSGFDFYTRFFVPKYGVNEDPVCGSAHCALA 237
             +I+++P+ DEI KCP  G++V+  A   S +DF +R+F P++G+NEDPV GSAHCALA
Sbjct: 176 EAVIDLKPRLDEISKCPCEGMMVTAAASDGSTYDFCSRYFAPRFGINEDPVTGSAHCALA 235

Query: 238 SYWSKKLGKCDFKAYQASPRGGILNIHLDEENQRVFLRGTAVTVMEGCVLV 288
            YWS ++ KCDF AYQAS RGG L +HLD+E QRV LRG AVTVMEG VLV
Sbjct: 236 HYWSLRMNKCDFFAYQASSRGGTLKVHLDKEKQRVLLRGKAVTVMEGYVLV 286


>AT4G02860.1 | Symbols:  | Phenazine biosynthesis PhzC/PhzF protein
           | chr4:1268952-1270508 REVERSE LENGTH=313
          Length = 313

 Score =  325 bits (832), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 168/298 (56%), Positives = 210/298 (70%), Gaps = 19/298 (6%)

Query: 3   KKPLKYYVVDAFTDSAFKGNPAAVCLLEED--KDDAWLQALAAEFNITATCYLTRIHYSL 60
           KK +KY+VVDAFTDSAFKGNPAAVC L +D  +DD WLQ+LAAEFNI+ TC+L  I    
Sbjct: 23  KKGVKYFVVDAFTDSAFKGNPAAVCFLNDDNERDDTWLQSLAAEFNISETCFLIPI---- 78

Query: 61  NGASINPCFRLRWFSPLTEAKLCGHATLAAAHALFSSGLVDTSNIEFVTLSGLLTAKKIS 120
                   F LRWF+PL E  LCGHATLA+AH LFS+GLVD+  +EFVT SG+LTAK++S
Sbjct: 79  --TGFQARFSLRWFTPLAEVDLCGHATLASAHCLFSNGLVDSDMVEFVTRSGILTAKRVS 136

Query: 121 N---LEKGEAH-----IELDFPADPIEELNFD--GTEQISVALKGASIVDIKRTHNVDDL 170
           +   L  GE       IEL+FP     ++N     +  I+ AL GA+IVDIK T   +++
Sbjct: 137 DTSELSDGEVKGGTFLIELNFPVVTTCDVNLSDVSSSMITKALNGATIVDIKATAT-NNI 195

Query: 171 LVEVTSANNIIEVEPQYDEIVKCPGRGIIVSGIAPPKSGFDFYTRFFVPKYGVNEDPVCG 230
           LV + S  ++ E++P+ D+I+KCP  GIIV+      S +DFY+R+F PK+GV+EDPVCG
Sbjct: 196 LVVLPSKESVTELQPRMDDILKCPCDGIIVTAAGSTGSSYDFYSRYFAPKFGVDEDPVCG 255

Query: 231 SAHCALASYWSKKLGKCDFKAYQASPRGGILNIHLDEENQRVFLRGTAVTVMEGCVLV 288
           SAHCALA YWS K+ K DF AYQAS R G + IHLD+E QRV LRG AVTVMEG VLV
Sbjct: 256 SAHCALAHYWSIKMNKFDFLAYQASSRSGTIRIHLDKEKQRVLLRGKAVTVMEGHVLV 313


>AT4G02850.1 | Symbols:  | phenazine biosynthesis PhzC/PhzF family
           protein | chr4:1266535-1268569 REVERSE LENGTH=306
          Length = 306

 Score =  294 bits (752), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 150/308 (48%), Positives = 207/308 (67%), Gaps = 25/308 (8%)

Query: 1   MAKKPLKYYVVDAFTDSAFKGNPAAVCLLEED--KDDAWLQALAAEFNITATCYLTRIHY 58
           + KKP+KY++VDAFT+SAFKGN AAVC LEED  +DD WLQ++A+EF++  TC+L  I  
Sbjct: 4   LVKKPVKYFMVDAFTESAFKGNQAAVCFLEEDHERDDVWLQSMASEFDLPLTCFLIPI-- 61

Query: 59  SLNGASINPCFRLRWFSPLTEAKLCGHATLAAAHALFSSGLVDTSN-IEFVTLSGLLTAK 117
                S  P F LRWF+ + E  +CGHATLA+AH++FS+ LV +S+ +EF T SG+LTAK
Sbjct: 62  ---PGSEPPRFLLRWFTAVAEMDICGHATLASAHSIFSNSLVGSSDTVEFSTNSGILTAK 118

Query: 118 KISNLEKGEAH-IELDFPADPIEELNFDGTEQISVALKGASIVDIK-------------- 162
           ++S+ +   +  IE++FP     E +       S AL GA+IVD++              
Sbjct: 119 RLSDCDSKRSFLIEMNFPVITTCEYSSKDVSIFSKALNGATIVDVRETKTDRLIFKPLIG 178

Query: 163 --RTHNVDDLLVEVTSANNIIEVEPQYDEIVKCPGRGIIVSGIAPPKSGFDFYTRFFVPK 220
             +T + D ++V ++S  ++IE +P+ D+IVKCPG+ +IV+  AP  S FDF +R F PK
Sbjct: 179 AFKTTSTDQIIVVLSSWESVIEFQPRVDDIVKCPGKVMIVTAAAPQGSPFDFCSRLFAPK 238

Query: 221 YGVNEDPVCGSAHCALASYWSKKLGKCDFKAYQASPRGGILNIHLDEENQRVFLRGTAVT 280
            G+NED VCGSAHC+LA YWS K+ KCDF A+ AS R G L +H D+E QRV L G AVT
Sbjct: 239 LGLNEDSVCGSAHCSLAHYWSLKMNKCDFVAFAASQRSGTLKVHYDKEKQRVLLTGKAVT 298

Query: 281 VMEGCVLV 288
           VM+G +LV
Sbjct: 299 VMKGSILV 306