Miyakogusa Predicted Gene

Lj5g3v0963080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0963080.1 Non Chatacterized Hit- tr|I3IC32|I3IC32_9GAMM
Uncharacterized protein OS=Cellvibrio sp. BR
GN=O59_00,60.24,6e-19,Diaminopimelate epimerase-like,NULL; no
description,NULL; PhzC-PhzF,Phenazine biosynthesis PhzF
prot,gene.g60658.t1.1
         (86 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G02860.1 | Symbols:  | Phenazine biosynthesis PhzC/PhzF prote...   129   4e-31
AT1G03210.1 | Symbols:  | Phenazine biosynthesis PhzC/PhzF prote...   127   2e-30
AT4G02850.1 | Symbols:  | phenazine biosynthesis PhzC/PhzF famil...   117   2e-27

>AT4G02860.1 | Symbols:  | Phenazine biosynthesis PhzC/PhzF protein
           | chr4:1268952-1270508 REVERSE LENGTH=313
          Length = 313

 Score =  129 bits (324), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 58/80 (72%), Positives = 65/80 (81%)

Query: 6   SGFDFYSRYFCPKFGINEDPVCGSAHCALASYWSKKLGMCDFNAYQASPRGGALISHLDE 65
           S +DFYSRYF PKFG++EDPVCGSAHCALA YWS K+   DF AYQAS R G +  HLD+
Sbjct: 233 SSYDFYSRYFAPKFGVDEDPVCGSAHCALAHYWSIKMNKFDFLAYQASSRSGTIRIHLDK 292

Query: 66  ENQRVLLRGKAVTVMEGCIL 85
           E QRVLLRGKAVTVMEG +L
Sbjct: 293 EKQRVLLRGKAVTVMEGHVL 312


>AT1G03210.1 | Symbols:  | Phenazine biosynthesis PhzC/PhzF protein
           | chr1:782948-784240 FORWARD LENGTH=286
          Length = 286

 Score =  127 bits (318), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 59/81 (72%), Positives = 65/81 (80%)

Query: 6   SGFDFYSRYFCPKFGINEDPVCGSAHCALASYWSKKLGMCDFNAYQASPRGGALISHLDE 65
           S +DF SRYF P+FGINEDPV GSAHCALA YWS ++  CDF AYQAS RGG L  HLD+
Sbjct: 206 STYDFCSRYFAPRFGINEDPVTGSAHCALAHYWSLRMNKCDFFAYQASSRGGTLKVHLDK 265

Query: 66  ENQRVLLRGKAVTVMEGCILA 86
           E QRVLLRGKAVTVMEG +L 
Sbjct: 266 EKQRVLLRGKAVTVMEGYVLV 286


>AT4G02850.1 | Symbols:  | phenazine biosynthesis PhzC/PhzF family
           protein | chr4:1266535-1268569 REVERSE LENGTH=306
          Length = 306

 Score =  117 bits (292), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/84 (65%), Positives = 61/84 (72%)

Query: 2   APPDSGFDFYSRYFCPKFGINEDPVCGSAHCALASYWSKKLGMCDFNAYQASPRGGALIS 61
           AP  S FDF SR F PK G+NED VCGSAHC+LA YWS K+  CDF A+ AS R G L  
Sbjct: 222 APQGSPFDFCSRLFAPKLGLNEDSVCGSAHCSLAHYWSLKMNKCDFVAFAASQRSGTLKV 281

Query: 62  HLDEENQRVLLRGKAVTVMEGCIL 85
           H D+E QRVLL GKAVTVM+G IL
Sbjct: 282 HYDKEKQRVLLTGKAVTVMKGSIL 305