Miyakogusa Predicted Gene

Lj5g3v0962850.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0962850.2 Non Chatacterized Hit- tr|I3S4C3|I3S4C3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,Diaminopimelate epimerase-like,NULL; PhzF_family: phenazine
biosynthesis protein, PhzF ,Phenazine bi,CUFF.54447.2
         (295 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G02860.1 | Symbols:  | Phenazine biosynthesis PhzC/PhzF prote...   337   6e-93
AT1G03210.1 | Symbols:  | Phenazine biosynthesis PhzC/PhzF prote...   327   7e-90
AT4G02850.1 | Symbols:  | phenazine biosynthesis PhzC/PhzF famil...   306   1e-83

>AT4G02860.1 | Symbols:  | Phenazine biosynthesis PhzC/PhzF protein
           | chr4:1268952-1270508 REVERSE LENGTH=313
          Length = 313

 Score =  337 bits (864), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 176/296 (59%), Positives = 216/296 (72%), Gaps = 12/296 (4%)

Query: 4   KPVKYYVVDAFTESAFKGNPAAVCLL--EQERDDEWLQAVAAEFNISQTGYLTRIDEASN 61
           K VKY+VVDAFT+SAFKGNPAAVC L  + ERDD WLQ++AAEFNIS+T +L  I     
Sbjct: 24  KGVKYFVVDAFTDSAFKGNPAAVCFLNDDNERDDTWLQSLAAEFNISETCFLIPI-TGFQ 82

Query: 62  PRFGLRWFTPLVEVKLCGHATLAAAHTLFSSGLAKTNVIEFVTLSGILTAKKVPAVNVTN 121
            RF LRWFTPL EV LCGHATLA+AH LFS+GL  ++++EFVT SGILTAK+V     ++
Sbjct: 83  ARFSLRWFTPLAEVDLCGHATLASAHCLFSNGLVDSDMVEFVTRSGILTAKRV-----SD 137

Query: 122 ANNLQKSEAKDG-FYIELDFPADPITEFN-SDVTT-QISGALNGPPIIDIKRTQIGDNLL 178
            + L   E K G F IEL+FP     + N SDV++  I+ ALNG  I+DIK T   +N+L
Sbjct: 138 TSELSDGEVKGGTFLIELNFPVVTTCDVNLSDVSSSMITKALNGATIVDIKATAT-NNIL 196

Query: 179 VEVTSGKDVIAVQPQLDAIVKCPGNGIIVSGMAPPDSGFDFYSRYFCPKLGINEDPVCGS 238
           V + S + V  +QP++D I+KCP +GIIV+      S +DFYSRYF PK G++EDPVCGS
Sbjct: 197 VVLPSKESVTELQPRMDDILKCPCDGIIVTAAGSTGSSYDFYSRYFAPKFGVDEDPVCGS 256

Query: 239 AHCALASYWSKKLGKCDFNAYQASPRGGALIIHLDEENQRVLLRGKAVTVMEGCIL 294
           AHCALA YWS K+ K DF AYQAS R G + IHLD+E QRVLLRGKAVTVMEG +L
Sbjct: 257 AHCALAHYWSIKMNKFDFLAYQASSRSGTIRIHLDKEKQRVLLRGKAVTVMEGHVL 312


>AT1G03210.1 | Symbols:  | Phenazine biosynthesis PhzC/PhzF protein
           | chr1:782948-784240 FORWARD LENGTH=286
          Length = 286

 Score =  327 bits (838), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 172/296 (58%), Positives = 210/296 (70%), Gaps = 18/296 (6%)

Query: 3   NKPVKYYVVDAFTESAFKGNPAAVCLLE--QERDDEWLQAVAAEFNISQTGYLTRIDEAS 60
            K VKY++VDAF ESAFKGNPAAVC LE   ERDD WLQ++A EFNIS+T +LT I    
Sbjct: 4   KKRVKYFIVDAFAESAFKGNPAAVCFLEDDNERDDAWLQSLATEFNISETCFLTPI-IGD 62

Query: 61  NPRFGLRWFTPLVEVKLCGHATLAAAHTLFSSGLAKTNVIEFVTLSGILTAKKVPAVNVT 120
            PRF LRWFTP+ EV LCGHATLA+AH LFS+GL  +  +EF TLSGILTAK     ++ 
Sbjct: 63  LPRFRLRWFTPVAEVDLCGHATLASAHVLFSTGLVGSETVEFDTLSGILTAK-----HLK 117

Query: 121 NANNLQKSEAKDGFYIELDFPADPITEFN--SDVTTQISGALNGPPIIDIKRTQIGDNLL 178
           N ++ ++S       IELDFP  P  E N   D  +  S ALNG  I+D+K T+   +LL
Sbjct: 118 NDDDGEESS------IELDFPVVPTYEVNYIDDDLSLFSKALNGATILDVKATK--KDLL 169

Query: 179 VEVTSGKDVIAVQPQLDAIVKCPGNGIIVSGMAPPDSGFDFYSRYFCPKLGINEDPVCGS 238
           V ++S + VI ++P+LD I KCP  G++V+  A   S +DF SRYF P+ GINEDPV GS
Sbjct: 170 VVLSSWEAVIDLKPRLDEISKCPCEGMMVTAAASDGSTYDFCSRYFAPRFGINEDPVTGS 229

Query: 239 AHCALASYWSKKLGKCDFNAYQASPRGGALIIHLDEENQRVLLRGKAVTVMEGCIL 294
           AHCALA YWS ++ KCDF AYQAS RGG L +HLD+E QRVLLRGKAVTVMEG +L
Sbjct: 230 AHCALAHYWSLRMNKCDFFAYQASSRGGTLKVHLDKEKQRVLLRGKAVTVMEGYVL 285


>AT4G02850.1 | Symbols:  | phenazine biosynthesis PhzC/PhzF family
           protein | chr4:1266535-1268569 REVERSE LENGTH=306
          Length = 306

 Score =  306 bits (783), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 159/313 (50%), Positives = 208/313 (66%), Gaps = 30/313 (9%)

Query: 1   MANKPVKYYVVDAFTESAFKGNPAAVCLLEQ--ERDDEWLQAVAAEFNISQTGYLTRIDE 58
           +  KPVKY++VDAFTESAFKGN AAVC LE+  ERDD WLQ++A+EF++  T +L  I  
Sbjct: 4   LVKKPVKYFMVDAFTESAFKGNQAAVCFLEEDHERDDVWLQSMASEFDLPLTCFLIPIPG 63

Query: 59  ASNPRFGLRWFTPLVEVKLCGHATLAAAHTLFSSGLA-KTNVIEFVTLSGILTAKKVPAV 117
           +  PRF LRWFT + E+ +CGHATLA+AH++FS+ L   ++ +EF T SGILTAK+    
Sbjct: 64  SEPPRFLLRWFTAVAEMDICGHATLASAHSIFSNSLVGSSDTVEFSTNSGILTAKR---- 119

Query: 118 NVTNANNLQKSEAKDGFYIELDFPADPITEFNSDVTTQISGALNGPPIIDIKRTQ----- 172
                  L   ++K  F IE++FP     E++S   +  S ALNG  I+D++ T+     
Sbjct: 120 -------LSDCDSKRSFLIEMNFPVITTCEYSSKDVSIFSKALNGATIVDVRETKTDRLI 172

Query: 173 ----IG-------DNLLVEVTSGKDVIAVQPQLDAIVKCPGNGIIVSGMAPPDSGFDFYS 221
               IG       D ++V ++S + VI  QP++D IVKCPG  +IV+  AP  S FDF S
Sbjct: 173 FKPLIGAFKTTSTDQIIVVLSSWESVIEFQPRVDDIVKCPGKVMIVTAAAPQGSPFDFCS 232

Query: 222 RYFCPKLGINEDPVCGSAHCALASYWSKKLGKCDFNAYQASPRGGALIIHLDEENQRVLL 281
           R F PKLG+NED VCGSAHC+LA YWS K+ KCDF A+ AS R G L +H D+E QRVLL
Sbjct: 233 RLFAPKLGLNEDSVCGSAHCSLAHYWSLKMNKCDFVAFAASQRSGTLKVHYDKEKQRVLL 292

Query: 282 RGKAVTVMEGCIL 294
            GKAVTVM+G IL
Sbjct: 293 TGKAVTVMKGSIL 305