Miyakogusa Predicted Gene

Lj5g3v0962850.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0962850.1 Non Chatacterized Hit- tr|I3SI57|I3SI57_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.66,0,Diaminopimelate epimerase-like,NULL; PhzF_family:
phenazine biosynthesis protein, PhzF ,Phenazine bi,CUFF.54447.1
         (295 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G02860.1 | Symbols:  | Phenazine biosynthesis PhzC/PhzF prote...   339   2e-93
AT1G03210.1 | Symbols:  | Phenazine biosynthesis PhzC/PhzF prote...   331   5e-91
AT4G02850.1 | Symbols:  | phenazine biosynthesis PhzC/PhzF famil...   302   2e-82

>AT4G02860.1 | Symbols:  | Phenazine biosynthesis PhzC/PhzF protein
           | chr4:1268952-1270508 REVERSE LENGTH=313
          Length = 313

 Score =  339 bits (869), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 175/297 (58%), Positives = 218/297 (73%), Gaps = 12/297 (4%)

Query: 4   KPVKYYVVDAFTESAFKGNPAAVCLLEED--KDDDWLQAVAAEFNISETCFLTRIDGTSN 61
           K VKY+VVDAFT+SAFKGNPAAVC L +D  +DD WLQ++AAEFNISETCFL  I G   
Sbjct: 24  KGVKYFVVDAFTDSAFKGNPAAVCFLNDDNERDDTWLQSLAAEFNISETCFLIPITGF-Q 82

Query: 62  PRFGLRWFTPVVEVNLCGHATLAAAHILFSSGLVKTNVIEFVTLSGILTVKKIPAVNATN 121
            RF LRWFTP+ EV+LCGHATLA+AH LFS+GLV ++++EFVT SGILT K++     ++
Sbjct: 83  ARFSLRWFTPLAEVDLCGHATLASAHCLFSNGLVDSDMVEFVTRSGILTAKRV-----SD 137

Query: 122 GTNLQKSEAKDG-FYIELDFPADHIIESNFD--GTARISGALNGAPIIDIKSTQNSEDFL 178
            + L   E K G F IEL+FP     + N     ++ I+ ALNGA I+DIK+T  + + L
Sbjct: 138 TSELSDGEVKGGTFLIELNFPVVTTCDVNLSDVSSSMITKALNGATIVDIKATA-TNNIL 196

Query: 179 VELASREDVIAVQPQLDAMVKFPGRGVIVSAIAPPESGFDFYSRFFCPKFGVDEDPVCGT 238
           V L S+E V  +QP++D ++K P  G+IV+A     S +DFYSR+F PKFGVDEDPVCG+
Sbjct: 197 VVLPSKESVTELQPRMDDILKCPCDGIIVTAAGSTGSSYDFYSRYFAPKFGVDEDPVCGS 256

Query: 239 AHCALASYWSKKLGKCDFIANQASPRGGILHIHLDEENQRVFLRGKAVTVMEGCVLV 295
           AHCALA YWS K+ K DF+A QAS R G + IHLD+E QRV LRGKAVTVMEG VLV
Sbjct: 257 AHCALAHYWSIKMNKFDFLAYQASSRSGTIRIHLDKEKQRVLLRGKAVTVMEGHVLV 313


>AT1G03210.1 | Symbols:  | Phenazine biosynthesis PhzC/PhzF protein
           | chr1:782948-784240 FORWARD LENGTH=286
          Length = 286

 Score =  331 bits (848), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 173/296 (58%), Positives = 214/296 (72%), Gaps = 18/296 (6%)

Query: 4   KPVKYYVVDAFTESAFKGNPAAVCLLEED--KDDDWLQAVAAEFNISETCFLTRIDGTSN 61
           K VKY++VDAF ESAFKGNPAAVC LE+D  +DD WLQ++A EFNISETCFLT I G   
Sbjct: 5   KRVKYFIVDAFAESAFKGNPAAVCFLEDDNERDDAWLQSLATEFNISETCFLTPIIG-DL 63

Query: 62  PRFGLRWFTPVVEVNLCGHATLAAAHILFSSGLVKTNVIEFVTLSGILTVKKIPAVNATN 121
           PRF LRWFTPV EV+LCGHATLA+AH+LFS+GLV +  +EF TLSGILT K         
Sbjct: 64  PRFRLRWFTPVAEVDLCGHATLASAHVLFSTGLVGSETVEFDTLSGILTAK--------- 114

Query: 122 GTNLQKSEAKDGFYIELDFPADHIIESNF--DGTARISGALNGAPIIDIKSTQNSEDFLV 179
             +L+  +  +   IELDFP     E N+  D  +  S ALNGA I+D+K+T+  +D LV
Sbjct: 115 --HLKNDDDGEESSIELDFPVVPTYEVNYIDDDLSLFSKALNGATILDVKATK--KDLLV 170

Query: 180 ELASREDVIAVQPQLDAMVKFPGRGVIVSAIAPPESGFDFYSRFFCPKFGVDEDPVCGTA 239
            L+S E VI ++P+LD + K P  G++V+A A   S +DF SR+F P+FG++EDPV G+A
Sbjct: 171 VLSSWEAVIDLKPRLDEISKCPCEGMMVTAAASDGSTYDFCSRYFAPRFGINEDPVTGSA 230

Query: 240 HCALASYWSKKLGKCDFIANQASPRGGILHIHLDEENQRVFLRGKAVTVMEGCVLV 295
           HCALA YWS ++ KCDF A QAS RGG L +HLD+E QRV LRGKAVTVMEG VLV
Sbjct: 231 HCALAHYWSLRMNKCDFFAYQASSRGGTLKVHLDKEKQRVLLRGKAVTVMEGYVLV 286


>AT4G02850.1 | Symbols:  | phenazine biosynthesis PhzC/PhzF family
           protein | chr4:1266535-1268569 REVERSE LENGTH=306
          Length = 306

 Score =  302 bits (774), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 157/314 (50%), Positives = 208/314 (66%), Gaps = 30/314 (9%)

Query: 1   MASKPVKYYVVDAFTESAFKGNPAAVCLLEED--KDDDWLQAVAAEFNISETCFLTRIDG 58
           +  KPVKY++VDAFTESAFKGN AAVC LEED  +DD WLQ++A+EF++  TCFL  I G
Sbjct: 4   LVKKPVKYFMVDAFTESAFKGNQAAVCFLEEDHERDDVWLQSMASEFDLPLTCFLIPIPG 63

Query: 59  TSNPRFGLRWFTPVVEVNLCGHATLAAAHILFSSGLV-KTNVIEFVTLSGILTVKKIPAV 117
           +  PRF LRWFT V E+++CGHATLA+AH +FS+ LV  ++ +EF T SGILT K+    
Sbjct: 64  SEPPRFLLRWFTAVAEMDICGHATLASAHSIFSNSLVGSSDTVEFSTNSGILTAKR---- 119

Query: 118 NATNGTNLQKSEAKDGFYIELDFPADHIIESNFDGTARISGALNGAPIIDIKSTQ----- 172
                  L   ++K  F IE++FP     E +    +  S ALNGA I+D++ T+     
Sbjct: 120 -------LSDCDSKRSFLIEMNFPVITTCEYSSKDVSIFSKALNGATIVDVRETKTDRLI 172

Query: 173 -----------NSEDFLVELASREDVIAVQPQLDAMVKFPGRGVIVSAIAPPESGFDFYS 221
                      +++  +V L+S E VI  QP++D +VK PG+ +IV+A AP  S FDF S
Sbjct: 173 FKPLIGAFKTTSTDQIIVVLSSWESVIEFQPRVDDIVKCPGKVMIVTAAAPQGSPFDFCS 232

Query: 222 RFFCPKFGVDEDPVCGTAHCALASYWSKKLGKCDFIANQASPRGGILHIHLDEENQRVFL 281
           R F PK G++ED VCG+AHC+LA YWS K+ KCDF+A  AS R G L +H D+E QRV L
Sbjct: 233 RLFAPKLGLNEDSVCGSAHCSLAHYWSLKMNKCDFVAFAASQRSGTLKVHYDKEKQRVLL 292

Query: 282 RGKAVTVMEGCVLV 295
            GKAVTVM+G +LV
Sbjct: 293 TGKAVTVMKGSILV 306