Miyakogusa Predicted Gene

Lj5g3v0931370.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0931370.1 Non Chatacterized Hit- tr|I3S7F6|I3S7F6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.05,0,CYTC,Cytochrome c domain; Cytochrom_C1,Cytochrome c1;
CYTOCHROME C1, HEME PROTEIN, MITOCHONDRIAL,NUL,CUFF.54345.1
         (307 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G40810.1 | Symbols:  | Cytochrome C1 family | chr5:16340200-1...   472   e-133
AT3G27240.1 | Symbols:  | Cytochrome C1 family | chr3:10056144-1...   463   e-131
AT5G40810.2 | Symbols:  | Cytochrome C1 family | chr5:16340670-1...   456   e-128

>AT5G40810.1 | Symbols:  | Cytochrome C1 family |
           chr5:16340200-16342327 FORWARD LENGTH=307
          Length = 307

 Score =  472 bits (1215), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 236/277 (85%), Positives = 250/277 (90%), Gaps = 3/277 (1%)

Query: 31  NNDAGSTGSSSIRALALIGAGVSGFLGFATTASADEAEHGLSCPSYPWPHEGILSSYDHA 90
           N DAGS G   +RA AL+GAG++G L F+T ASADEAEHGL CP+YPWPHEGILSSYDHA
Sbjct: 34  NEDAGSAG---LRAFALMGAGITGLLSFSTVASADEAEHGLECPNYPWPHEGILSSYDHA 90

Query: 91  SIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRP 150
           SIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEE KAMAAEIEVVDGPNDEGEMFTRP
Sbjct: 91  SIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEEAKAMAAEIEVVDGPNDEGEMFTRP 150

Query: 151 GKLSDRLPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPSGVSIR 210
           GKLSDRLP+PY+NE+AARFANGGAYPPDLSL+TKARHNGQNYVFALLTGYRDPP+G+SIR
Sbjct: 151 GKLSDRLPEPYSNESAARFANGGAYPPDLSLVTKARHNGQNYVFALLTGYRDPPAGISIR 210

Query: 211 EGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATESQMGKDVVSFLSWAAEPEMEERKLM 270
           EGLHYNPYFPGGAIAMPKMLND AVEYEDGTPATE+QMGKDVVSFLSWAAEPEMEERKLM
Sbjct: 211 EGLHYNPYFPGGAIAMPKMLNDEAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLM 270

Query: 271 GFKWIFVXXXXXXXXXXXXXXXWSVLKSRKLVLDVVN 307
           GFKWIF+               WSVLKSRKLVLDVVN
Sbjct: 271 GFKWIFLLSLALLQAAYYRRLKWSVLKSRKLVLDVVN 307


>AT3G27240.1 | Symbols:  | Cytochrome C1 family |
           chr3:10056144-10058370 REVERSE LENGTH=307
          Length = 307

 Score =  463 bits (1192), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 233/277 (84%), Positives = 247/277 (89%), Gaps = 3/277 (1%)

Query: 31  NNDAGSTGSSSIRALALIGAGVSGFLGFATTASADEAEHGLSCPSYPWPHEGILSSYDHA 90
           + DAGS+G   +RALAL+GAGV+G L F+T ASADEAEHGL  P YPWPH+GILSSYDHA
Sbjct: 34  HEDAGSSG---VRALALLGAGVTGLLSFSTVASADEAEHGLESPEYPWPHDGILSSYDHA 90

Query: 91  SIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRP 150
           SIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEE KAMAAEIEVVDGPNDEGEMFTRP
Sbjct: 91  SIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEEAKAMAAEIEVVDGPNDEGEMFTRP 150

Query: 151 GKLSDRLPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPSGVSIR 210
           GKLSDR PQPYANE+AARFANGGAYPPDLSLITKARHNG NYVFALLTGYRDPP+G+SIR
Sbjct: 151 GKLSDRFPQPYANESAARFANGGAYPPDLSLITKARHNGPNYVFALLTGYRDPPAGISIR 210

Query: 211 EGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATESQMGKDVVSFLSWAAEPEMEERKLM 270
           EGLHYNPYFPGGAIAMPKMLND AVEYEDG PATE+QMGKD+VSFL+WAAEPEMEERKLM
Sbjct: 211 EGLHYNPYFPGGAIAMPKMLNDEAVEYEDGVPATEAQMGKDIVSFLAWAAEPEMEERKLM 270

Query: 271 GFKWIFVXXXXXXXXXXXXXXXWSVLKSRKLVLDVVN 307
           GFKWIF+               WSVLKSRKLVLDVVN
Sbjct: 271 GFKWIFLLSLALLQAAYYRRLKWSVLKSRKLVLDVVN 307


>AT5G40810.2 | Symbols:  | Cytochrome C1 family |
           chr5:16340670-16342327 FORWARD LENGTH=260
          Length = 260

 Score =  456 bits (1172), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 226/260 (86%), Positives = 239/260 (91%)

Query: 48  IGAGVSGFLGFATTASADEAEHGLSCPSYPWPHEGILSSYDHASIRRGHQVYQQVCASCH 107
           +GAG++G L F+T ASADEAEHGL CP+YPWPHEGILSSYDHASIRRGHQVYQQVCASCH
Sbjct: 1   MGAGITGLLSFSTVASADEAEHGLECPNYPWPHEGILSSYDHASIRRGHQVYQQVCASCH 60

Query: 108 SMSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRLPQPYANEAAA 167
           SMSLISYRDLVGVAYTEEE KAMAAEIEVVDGPNDEGEMFTRPGKLSDRLP+PY+NE+AA
Sbjct: 61  SMSLISYRDLVGVAYTEEEAKAMAAEIEVVDGPNDEGEMFTRPGKLSDRLPEPYSNESAA 120

Query: 168 RFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPSGVSIREGLHYNPYFPGGAIAMP 227
           RFANGGAYPPDLSL+TKARHNGQNYVFALLTGYRDPP+G+SIREGLHYNPYFPGGAIAMP
Sbjct: 121 RFANGGAYPPDLSLVTKARHNGQNYVFALLTGYRDPPAGISIREGLHYNPYFPGGAIAMP 180

Query: 228 KMLNDGAVEYEDGTPATESQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVXXXXXXXXXX 287
           KMLND AVEYEDGTPATE+QMGKDVVSFLSWAAEPEMEERKLMGFKWIF+          
Sbjct: 181 KMLNDEAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFLLSLALLQAAY 240

Query: 288 XXXXXWSVLKSRKLVLDVVN 307
                WSVLKSRKLVLDVVN
Sbjct: 241 YRRLKWSVLKSRKLVLDVVN 260