Miyakogusa Predicted Gene

Lj5g3v0921280.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0921280.2 Non Chatacterized Hit- tr|K4DJP7|K4DJP7_TRYCR
Tryptophanyl-tRNA synthetase, putative OS=Trypanosoma
,28.77,0.000000000005,no description,Rossmann-like alpha/beta/alpha
sandwich fold; no description,NULL; OS03G0335600 PROTE,CUFF.54260.2
         (270 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G33840.1 | Symbols:  | Tyrosyl-tRNA synthetase, class Ib, bac...   449   e-127
AT1G28350.1 | Symbols:  | Nucleotidylyl transferase superfamily ...   407   e-114

>AT2G33840.1 | Symbols:  | Tyrosyl-tRNA synthetase, class Ib,
           bacterial/mitochondrial | chr2:14315011-14317329 FORWARD
           LENGTH=385
          Length = 385

 Score =  449 bits (1156), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 208/270 (77%), Positives = 239/270 (88%), Gaps = 2/270 (0%)

Query: 1   MGGDLKKIEIVGRYLIEIWKAVGMDLEGGKVEFLWSSKEINARAHEYWPLVLDIAQKNNL 60
           MGGDLKKI +VG Y  EIWKA GMD    KVEFLWSS+EIN++A +YWPLV+DIA+KN L
Sbjct: 118 MGGDLKKIRVVGEYFQEIWKAAGMD--NDKVEFLWSSEEINSKADKYWPLVMDIARKNKL 175

Query: 61  KRIIRCSQIMGRGEHEELTAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDD 120
            RI+RC QIMGR E +EL+AAQI YPCMQCADIFFL+ADICQLGMDQRKVNVLAREYCDD
Sbjct: 176 PRILRCVQIMGRSETDELSAAQILYPCMQCADIFFLEADICQLGMDQRKVNVLAREYCDD 235

Query: 121 IKRRNKPIILSHHMLPGLQQGQDKMSKSDPSSSVFMEDEEAEVNVKIKKAYCPPKIVEGN 180
           IKR+NKPIILSHHMLPGLQQGQ+KMSKSDP S++FMEDEEAEVNVKIKKAYCPPK+V+GN
Sbjct: 236 IKRKNKPIILSHHMLPGLQQGQEKMSKSDPLSAIFMEDEEAEVNVKIKKAYCPPKVVKGN 295

Query: 181 PCLEYIKYLIFPWFNEFTVERNADNGGNKTFKSSEELVAAYESGELHPGDLKPALAKSLN 240
           PCLEYIKY+I PWF+EFTVERN + GGNKT+KS E++ A YESGELHPGDLK  L  +LN
Sbjct: 296 PCLEYIKYIILPWFDEFTVERNEEYGGNKTYKSFEDIAADYESGELHPGDLKKGLMNALN 355

Query: 241 KILEPVREHFRKDNNAKELLKRVKAYRITK 270
           KIL+PVR+HF+ D  AK LLK++KAYR+T+
Sbjct: 356 KILQPVRDHFKTDARAKNLLKQIKAYRVTR 385


>AT1G28350.1 | Symbols:  | Nucleotidylyl transferase superfamily
           protein | chr1:9944483-9949577 FORWARD LENGTH=748
          Length = 748

 Score =  407 bits (1046), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 188/270 (69%), Positives = 228/270 (84%), Gaps = 2/270 (0%)

Query: 1   MGGDLKKIEIVGRYLIEIWKAVGMDLEGGKVEFLWSSKEINARAHEYWPLVLDIAQKNNL 60
           +GGDLKKI +VG Y  EI++A GM+ E   VEFLWSS EINA+  EYWPLV+DIA +N+L
Sbjct: 104 LGGDLKKIRVVGEYFKEIFQAAGMNSEN--VEFLWSSDEINAKGDEYWPLVMDIACRNSL 161

Query: 61  KRIIRCSQIMGRGEHEELTAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDD 120
            +I RC  IMG  E+EEL+AA I Y CMQCAD FFL+ADICQLGMDQ+ VN+LAR+YCD 
Sbjct: 162 AQIKRCMPIMGLSENEELSAAHILYVCMQCADTFFLEADICQLGMDQQTVNLLARDYCDV 221

Query: 121 IKRRNKPIILSHHMLPGLQQGQDKMSKSDPSSSVFMEDEEAEVNVKIKKAYCPPKIVEGN 180
           +KR NKP+ILSHHMLPGLQQGQ KMSKSDPSS++FMEDEEAEVNVKIKKAYCPP IVEGN
Sbjct: 222 VKRENKPVILSHHMLPGLQQGQKKMSKSDPSSAIFMEDEEAEVNVKIKKAYCPPDIVEGN 281

Query: 181 PCLEYIKYLIFPWFNEFTVERNADNGGNKTFKSSEELVAAYESGELHPGDLKPALAKSLN 240
           PCLEY+K++I PWF+EFTVER+   GGN+TFKS E++   YESG+LHP DLK AL+K+LN
Sbjct: 282 PCLEYVKHIILPWFSEFTVERDEKYGGNRTFKSFEDITTDYESGQLHPKDLKDALSKALN 341

Query: 241 KILEPVREHFRKDNNAKELLKRVKAYRITK 270
           KIL+PVR+HF+ ++ AK LLK+VK Y++T+
Sbjct: 342 KILQPVRDHFKTNSRAKNLLKQVKGYKVTR 371



 Score =  392 bits (1006), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/270 (70%), Positives = 229/270 (84%), Gaps = 3/270 (1%)

Query: 1   MGGDLKKIEIVGRYLIEIWKAVGMDLEGGKVEFLWSSKEINARAHEYWPLVLDIAQKNNL 60
           +GGDL++I +VG Y  EIW+A GM+    KVEFLW+S EIN +  +YWPLV+DIA++NNL
Sbjct: 482 LGGDLERIRVVGEYFKEIWQAGGMN--NDKVEFLWASDEINGKGSKYWPLVMDIARRNNL 539

Query: 61  KRIIRCSQIMGRGEHEELTAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDD 120
           +RI+RC QIMGR E E L+AAQI YPCMQCADIF L+ADICQLGMDQRKVN+LAREYC D
Sbjct: 540 RRILRCGQIMGRSETEVLSAAQILYPCMQCADIFLLEADICQLGMDQRKVNMLAREYCAD 599

Query: 121 IKRRNKPIILSHHMLPGLQQGQDKMSKSDPSSSVFMEDEEAEVNVKIKKAYCPPKIVEGN 180
           IKR+NKPIILSHHMLPGLQQGQ+KMSKSDPSS++FMEDEEA+VN KI KAYCPPK VEGN
Sbjct: 600 IKRKNKPIILSHHMLPGLQQGQEKMSKSDPSSAIFMEDEEADVNEKISKAYCPPKTVEGN 659

Query: 181 PCLEYIKYLIFPWFNEFTVERNADNGGNKTFKSSEELVAAYESGELHPGDLKPALAKSLN 240
           PCLEY+KY++ P FNEF VE +  NGGNKTF S E++VA YE+GELHP DLK AL K+LN
Sbjct: 660 PCLEYVKYIVLPRFNEFKVE-SEKNGGNKTFNSFEDIVADYETGELHPEDLKKALMKALN 718

Query: 241 KILEPVREHFRKDNNAKELLKRVKAYRITK 270
             L+PVR+HF+ +  AK LL++VKA+R+T+
Sbjct: 719 ITLQPVRDHFKTNERAKNLLEQVKAFRVTR 748