Miyakogusa Predicted Gene

Lj5g3v0921280.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0921280.1 CUFF.54260.1
         (286 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G33840.1 | Symbols:  | Tyrosyl-tRNA synthetase, class Ib, bac...   365   e-101
AT1G28350.1 | Symbols:  | Nucleotidylyl transferase superfamily ...   335   2e-92

>AT2G33840.1 | Symbols:  | Tyrosyl-tRNA synthetase, class Ib,
           bacterial/mitochondrial | chr2:14315011-14317329 FORWARD
           LENGTH=385
          Length = 385

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 170/213 (79%), Positives = 190/213 (89%), Gaps = 2/213 (0%)

Query: 35  ELRFQIVRSVGEECIQEDELLNLLANKPEPVCYDGFEPSGRMHIAQGVMKTINVNKLTSA 94
           E R++IVRS+GEECIQE+EL NLLA K  P+CYDGFEPSGRMHIAQGVMK INVNK+TSA
Sbjct: 40  EKRYKIVRSIGEECIQEEELKNLLAKKAAPICYDGFEPSGRMHIAQGVMKVINVNKMTSA 99

Query: 95  GCRVKIWIADWFAKLNNKMGGDLKKIEIVGRYLIEIWKAVGMDLEGGKVEFLWSSKEINA 154
           GCRVKIWIADWFA+LNNKMGGDLKKI +VG Y  EIWKA GMD    KVEFLWSS+EIN+
Sbjct: 100 GCRVKIWIADWFAQLNNKMGGDLKKIRVVGEYFQEIWKAAGMD--NDKVEFLWSSEEINS 157

Query: 155 RAHEYWPLVLDIAQKNNLKRIIRCSQIMGRGEHEELTAAQIFYPCMQCADIFFLKADICQ 214
           +A +YWPLV+DIA+KN L RI+RC QIMGR E +EL+AAQI YPCMQCADIFFL+ADICQ
Sbjct: 158 KADKYWPLVMDIARKNKLPRILRCVQIMGRSETDELSAAQILYPCMQCADIFFLEADICQ 217

Query: 215 LGMDQRKVNVLAREYCDDIKRRNKPIILSHRIL 247
           LGMDQRKVNVLAREYCDDIKR+NKPIILSH +L
Sbjct: 218 LGMDQRKVNVLAREYCDDIKRKNKPIILSHHML 250


>AT1G28350.1 | Symbols:  | Nucleotidylyl transferase superfamily
           protein | chr1:9944483-9949577 FORWARD LENGTH=748
          Length = 748

 Score =  335 bits (859), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 160/213 (75%), Positives = 187/213 (87%), Gaps = 2/213 (0%)

Query: 35  ELRFQIVRSVGEECIQEDELLNLLANKPEPVCYDGFEPSGRMHIAQGVMKTINVNKLTSA 94
           E++++IVRS+GEECIQEDEL NLLA KP P+CYDGFEPSGRMHIAQGVMK  NVNKLTSA
Sbjct: 404 EMKYKIVRSIGEECIQEDELKNLLAKKPAPICYDGFEPSGRMHIAQGVMKVTNVNKLTSA 463

Query: 95  GCRVKIWIADWFAKLNNKMGGDLKKIEIVGRYLIEIWKAVGMDLEGGKVEFLWSSKEINA 154
           GC+VKIWIADWFA+LNNK+GGDL++I +VG Y  EIW+A GM+    KVEFLW+S EIN 
Sbjct: 464 GCQVKIWIADWFAQLNNKLGGDLERIRVVGEYFKEIWQAGGMN--NDKVEFLWASDEING 521

Query: 155 RAHEYWPLVLDIAQKNNLKRIIRCSQIMGRGEHEELTAAQIFYPCMQCADIFFLKADICQ 214
           +  +YWPLV+DIA++NNL+RI+RC QIMGR E E L+AAQI YPCMQCADIF L+ADICQ
Sbjct: 522 KGSKYWPLVMDIARRNNLRRILRCGQIMGRSETEVLSAAQILYPCMQCADIFLLEADICQ 581

Query: 215 LGMDQRKVNVLAREYCDDIKRRNKPIILSHRIL 247
           LGMDQRKVN+LAREYC DIKR+NKPIILSH +L
Sbjct: 582 LGMDQRKVNMLAREYCADIKRKNKPIILSHHML 614



 Score =  323 bits (827), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 150/213 (70%), Positives = 177/213 (83%), Gaps = 2/213 (0%)

Query: 35  ELRFQIVRSVGEECIQEDELLNLLANKPEPVCYDGFEPSGRMHIAQGVMKTINVNKLTSA 94
           E R+ +VRSVGE+CI +DEL +LLA K  PVCYDGFEPSGRMHIAQG+MK +NVNKLTSA
Sbjct: 26  EKRYNVVRSVGEQCIHDDELKDLLAKKAAPVCYDGFEPSGRMHIAQGLMKIMNVNKLTSA 85

Query: 95  GCRVKIWIADWFAKLNNKMGGDLKKIEIVGRYLIEIWKAVGMDLEGGKVEFLWSSKEINA 154
           GCRVKIWIADWFA +NNK+GGDLKKI +VG Y  EI++A GM+ E   VEFLWSS EINA
Sbjct: 86  GCRVKIWIADWFAYMNNKLGGDLKKIRVVGEYFKEIFQAAGMNSEN--VEFLWSSDEINA 143

Query: 155 RAHEYWPLVLDIAQKNNLKRIIRCSQIMGRGEHEELTAAQIFYPCMQCADIFFLKADICQ 214
           +  EYWPLV+DIA +N+L +I RC  IMG  E+EEL+AA I Y CMQCAD FFL+ADICQ
Sbjct: 144 KGDEYWPLVMDIACRNSLAQIKRCMPIMGLSENEELSAAHILYVCMQCADTFFLEADICQ 203

Query: 215 LGMDQRKVNVLAREYCDDIKRRNKPIILSHRIL 247
           LGMDQ+ VN+LAR+YCD +KR NKP+ILSH +L
Sbjct: 204 LGMDQQTVNLLARDYCDVVKRENKPVILSHHML 236