Miyakogusa Predicted Gene

Lj5g3v0921240.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0921240.2 tr|B7FYR9|B7FYR9_PHATC Predicted protein
OS=Phaeodactylum tricornutum (strain CCAP 1055/1)
GN=PHATRD,29.47,0.00000000000002,seg,NULL; PAP_fibrillin,Plastid
lipid-associated protein/fibrillin conserved domain,CUFF.54257.2
         (299 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42130.4 | Symbols:  | Plastid-lipid associated protein PAP /...   355   2e-98
AT2G42130.3 | Symbols:  | Plastid-lipid associated protein PAP /...   338   3e-93
AT3G58010.1 | Symbols: PGL34 | plastoglobulin 34kD | chr3:214759...   337   6e-93
AT2G42130.2 | Symbols:  | Plastid-lipid associated protein PAP /...   328   4e-90
AT2G42130.1 | Symbols:  | Plastid-lipid associated protein PAP /...   299   2e-81
AT2G42130.5 | Symbols:  | Plastid-lipid associated protein PAP /...   285   2e-77

>AT2G42130.4 | Symbols:  | Plastid-lipid associated protein PAP /
           fibrillin family protein | chr2:17566242-17567916
           FORWARD LENGTH=299
          Length = 299

 Score =  355 bits (911), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 178/268 (66%), Positives = 211/268 (78%), Gaps = 7/268 (2%)

Query: 33  WKVSASPRTRHGGCCRAMVQ-IQTGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVSGK 91
           WK S   R       RAMVQ    G+P  YA+EMERLSAKESLLLA KDAGGFEALV+GK
Sbjct: 38  WKNSCRRR-----VLRAMVQETVQGSPLVYAREMERLSAKESLLLALKDAGGFEALVTGK 92

Query: 92  TTEYQKIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGPGTPGLFAARLIFENFPSS 151
           TT  Q+IDVNERIT LERLNPTPRPTTSP  EGRWNFEWFG G+PGL AAR+IFE FPS+
Sbjct: 93  TTNMQRIDVNERITSLERLNPTPRPTTSPCFEGRWNFEWFGSGSPGLLAARVIFERFPST 152

Query: 152 LANLSKLDVVIKDGNAKITANTRYLNSIESKIILSTKLSVEGPLRMKEEYVEGVLVSPTV 211
           LANLS+++++IKD NAK TAN + LNSIESKIILS+KL+VEGPLR+KEEYVEG+L +PTV
Sbjct: 153 LANLSRMEILIKDANAKATANIKLLNSIESKIILSSKLTVEGPLRLKEEYVEGMLETPTV 212

Query: 212 IEERVPEQIKXXXXXXXXXXXXXPVPIRDAVASGLKVPLSGSIQRLFMISYLDEEILIIR 271
           IEE VPEQ+K             P  I+D +ASGL++PLSGS +R FMISYLDEEILI+R
Sbjct: 213 IEEAVPEQLKSALGQAATTLQQLPALIKDTLASGLRIPLSGSFERFFMISYLDEEILIVR 272

Query: 272 DTAGMPEVLTRLDASPSSIGESGPDYES 299
           DT G+PEVLTR++   S++ E+  +Y+S
Sbjct: 273 DTEGVPEVLTRIETPSSTVVET-IEYDS 299


>AT2G42130.3 | Symbols:  | Plastid-lipid associated protein PAP /
           fibrillin family protein | chr2:17566389-17567916
           FORWARD LENGTH=271
          Length = 271

 Score =  338 bits (867), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 167/259 (64%), Positives = 198/259 (76%), Gaps = 21/259 (8%)

Query: 56  GAPAAYAKEMERLSAKESLLLA---------------------FKDAGGFEALVSGKTTE 94
           G+P  YA+EMERLSAKESLLLA                      KDAGGFEALV+GKTT 
Sbjct: 8   GSPLVYAREMERLSAKESLLLAEQSSVCLELSNYFCPEAIYVQLKDAGGFEALVTGKTTN 67

Query: 95  YQKIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGPGTPGLFAARLIFENFPSSLAN 154
            Q+IDVNERIT LERLNPTPRPTTSP  EGRWNFEWFG G+PGL AAR+IFE FPS+LAN
Sbjct: 68  MQRIDVNERITSLERLNPTPRPTTSPCFEGRWNFEWFGSGSPGLLAARVIFERFPSTLAN 127

Query: 155 LSKLDVVIKDGNAKITANTRYLNSIESKIILSTKLSVEGPLRMKEEYVEGVLVSPTVIEE 214
           LS+++++IKD NAK TAN + LNSIESKIILS+KL+VEGPLR+KEEYVEG+L +PTVIEE
Sbjct: 128 LSRMEILIKDANAKATANIKLLNSIESKIILSSKLTVEGPLRLKEEYVEGMLETPTVIEE 187

Query: 215 RVPEQIKXXXXXXXXXXXXXPVPIRDAVASGLKVPLSGSIQRLFMISYLDEEILIIRDTA 274
            VPEQ+K             P  I+D +ASGL++PLSGS +R FMISYLDEEILI+RDT 
Sbjct: 188 AVPEQLKSALGQAATTLQQLPALIKDTLASGLRIPLSGSFERFFMISYLDEEILIVRDTE 247

Query: 275 GMPEVLTRLDASPSSIGES 293
           G+PEVLTR++   S++ E+
Sbjct: 248 GVPEVLTRIETPSSTVVET 266


>AT3G58010.1 | Symbols: PGL34 | plastoglobulin 34kD |
           chr3:21475949-21477463 REVERSE LENGTH=308
          Length = 308

 Score =  337 bits (864), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 159/239 (66%), Positives = 194/239 (81%), Gaps = 1/239 (0%)

Query: 47  CRAMVQIQT-GAPAAYAKEMERLSAKESLLLAFKDAGGFEALVSGKTTEYQKIDVNERIT 105
           CRAMVQ    G P+ YA+EMERLSAKESL+LAF DAGGFEALV+GK T+ QKIDVNERIT
Sbjct: 52  CRAMVQDSVQGIPSVYAREMERLSAKESLILAFNDAGGFEALVTGKITDMQKIDVNERIT 111

Query: 106 GLERLNPTPRPTTSPFLEGRWNFEWFGPGTPGLFAARLIFENFPSSLANLSKLDVVIKDG 165
            LERLNPTPRPTTSP+LEGRW+FEWFG  TPG  A R++FE FPS+L +LS +++ IKD 
Sbjct: 112 NLERLNPTPRPTTSPYLEGRWSFEWFGVNTPGSLAVRVMFERFPSTLVSLSNMEIFIKDN 171

Query: 166 NAKITANTRYLNSIESKIILSTKLSVEGPLRMKEEYVEGVLVSPTVIEERVPEQIKXXXX 225
           N K TAN + LNSIE+KI LS+KL++EGPLRMKEEY+EG+L SPTVIEE VP+Q++    
Sbjct: 172 NTKATANIKLLNSIENKITLSSKLTIEGPLRMKEEYLEGLLESPTVIEEAVPDQLRGLLG 231

Query: 226 XXXXXXXXXPVPIRDAVASGLKVPLSGSIQRLFMISYLDEEILIIRDTAGMPEVLTRLD 284
                    P PI+D +A+GL++PL G+ QR FMISYLD+EILI+RDTAG+PEVLTR++
Sbjct: 232 QATTTLQQLPEPIKDTLANGLRIPLGGTYQRFFMISYLDDEILIVRDTAGVPEVLTRVE 290


>AT2G42130.2 | Symbols:  | Plastid-lipid associated protein PAP /
           fibrillin family protein | chr2:17566242-17567830
           FORWARD LENGTH=269
          Length = 269

 Score =  328 bits (840), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 163/237 (68%), Positives = 187/237 (78%), Gaps = 6/237 (2%)

Query: 33  WKVSASPRTRHGGCCRAMVQ-IQTGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVSGK 91
           WK S   R       RAMVQ    G+P  YA+EMERLSAKESLLLA KDAGGFEALV+GK
Sbjct: 38  WKNSCRRR-----VLRAMVQETVQGSPLVYAREMERLSAKESLLLALKDAGGFEALVTGK 92

Query: 92  TTEYQKIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGPGTPGLFAARLIFENFPSS 151
           TT  Q+IDVNERIT LERLNPTPRPTTSP  EGRWNFEWFG G+PGL AAR+IFE FPS+
Sbjct: 93  TTNMQRIDVNERITSLERLNPTPRPTTSPCFEGRWNFEWFGSGSPGLLAARVIFERFPST 152

Query: 152 LANLSKLDVVIKDGNAKITANTRYLNSIESKIILSTKLSVEGPLRMKEEYVEGVLVSPTV 211
           LANLS+++++IKD NAK TAN + LNSIESKIILS+KL+VEGPLR+KEEYVEG+L +PTV
Sbjct: 153 LANLSRMEILIKDANAKATANIKLLNSIESKIILSSKLTVEGPLRLKEEYVEGMLETPTV 212

Query: 212 IEERVPEQIKXXXXXXXXXXXXXPVPIRDAVASGLKVPLSGSIQRLFMISYLDEEIL 268
           IEE VPEQ+K             P  I+D +ASGL++PLSGS +R FMISYLDEEIL
Sbjct: 213 IEEAVPEQLKSALGQAATTLQQLPALIKDTLASGLRIPLSGSFERFFMISYLDEEIL 269


>AT2G42130.1 | Symbols:  | Plastid-lipid associated protein PAP /
           fibrillin family protein | chr2:17566242-17567651
           FORWARD LENGTH=270
          Length = 270

 Score =  299 bits (765), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 150/228 (65%), Positives = 175/228 (76%), Gaps = 6/228 (2%)

Query: 33  WKVSASPRTRHGGCCRAMVQ-IQTGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVSGK 91
           WK S   R       RAMVQ    G+P  YA+EMERLSAKESLLLA KDAGGFEALV+GK
Sbjct: 38  WKNSCRRR-----VLRAMVQETVQGSPLVYAREMERLSAKESLLLALKDAGGFEALVTGK 92

Query: 92  TTEYQKIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGPGTPGLFAARLIFENFPSS 151
           TT  Q+IDVNERIT LERLNPTPRPTTSP  EGRWNFEWFG G+PGL AAR+IFE FPS+
Sbjct: 93  TTNMQRIDVNERITSLERLNPTPRPTTSPCFEGRWNFEWFGSGSPGLLAARVIFERFPST 152

Query: 152 LANLSKLDVVIKDGNAKITANTRYLNSIESKIILSTKLSVEGPLRMKEEYVEGVLVSPTV 211
           LANLS+++++IKD NAK TAN + LNSIESKIILS+KL+VEGPLR+KEEYVEG+L +PTV
Sbjct: 153 LANLSRMEILIKDANAKATANIKLLNSIESKIILSSKLTVEGPLRLKEEYVEGMLETPTV 212

Query: 212 IEERVPEQIKXXXXXXXXXXXXXPVPIRDAVASGLKVPLSGSIQRLFM 259
           IEE VPEQ+K             P  I+D +ASGL++PLS  +   F+
Sbjct: 213 IEEAVPEQLKSALGQAATTLQQLPALIKDTLASGLRIPLSKLLYPFFI 260


>AT2G42130.5 | Symbols:  | Plastid-lipid associated protein PAP /
           fibrillin family protein | chr2:17566862-17567916
           FORWARD LENGTH=204
          Length = 204

 Score =  285 bits (730), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 135/198 (68%), Positives = 163/198 (82%)

Query: 96  QKIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGPGTPGLFAARLIFENFPSSLANL 155
           Q+IDVNERIT LERLNPTPRPTTSP  EGRWNFEWFG G+PGL AAR+IFE FPS+LANL
Sbjct: 2   QRIDVNERITSLERLNPTPRPTTSPCFEGRWNFEWFGSGSPGLLAARVIFERFPSTLANL 61

Query: 156 SKLDVVIKDGNAKITANTRYLNSIESKIILSTKLSVEGPLRMKEEYVEGVLVSPTVIEER 215
           S+++++IKD NAK TAN + LNSIESKIILS+KL+VEGPLR+KEEYVEG+L +PTVIEE 
Sbjct: 62  SRMEILIKDANAKATANIKLLNSIESKIILSSKLTVEGPLRLKEEYVEGMLETPTVIEEA 121

Query: 216 VPEQIKXXXXXXXXXXXXXPVPIRDAVASGLKVPLSGSIQRLFMISYLDEEILIIRDTAG 275
           VPEQ+K             P  I+D +ASGL++PLSGS +R FMISYLDEEILI+RDT G
Sbjct: 122 VPEQLKSALGQAATTLQQLPALIKDTLASGLRIPLSGSFERFFMISYLDEEILIVRDTEG 181

Query: 276 MPEVLTRLDASPSSIGES 293
           +PEVLTR++   S++ E+
Sbjct: 182 VPEVLTRIETPSSTVVET 199