Miyakogusa Predicted Gene
- Lj5g3v0921010.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0921010.1 Non Chatacterized Hit- tr|I1L2M9|I1L2M9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50387 PE,81.84,0,domain
in helicases and associated with SANT,HAS subgroup; DEAD-like
helicases superfamily,Helicase,,CUFF.54309.1
(2016 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 2103 0.0
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 313 1e-84
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 299 2e-80
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 280 8e-75
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 280 8e-75
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 280 8e-75
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 279 1e-74
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 279 1e-74
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 265 2e-70
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 259 2e-68
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 241 3e-63
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 241 3e-63
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 241 3e-63
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 237 7e-62
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 226 9e-59
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 224 5e-58
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 223 1e-57
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 210 1e-53
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 200 9e-51
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 194 4e-49
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 194 5e-49
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 183 1e-45
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 178 3e-44
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 178 4e-44
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 172 3e-42
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 168 3e-41
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 166 1e-40
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 161 4e-39
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 151 5e-36
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 137 1e-31
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 124 5e-28
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 124 9e-28
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 124 9e-28
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 124 9e-28
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 120 1e-26
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 119 2e-26
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 115 4e-25
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 112 4e-24
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 109 2e-23
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 108 6e-23
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 107 6e-23
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 103 1e-21
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 102 3e-21
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 101 6e-21
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 100 2e-20
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 98 7e-20
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 95 6e-19
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 92 3e-18
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 86 2e-16
AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein / ... 84 1e-15
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 82 4e-15
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 80 1e-14
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 76 3e-13
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 72 3e-12
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 63 2e-09
AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases... 63 3e-09
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 63 3e-09
AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 55 4e-07
AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family... 55 4e-07
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 2103 bits (5450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1176/2075 (56%), Positives = 1411/2075 (68%), Gaps = 94/2075 (4%)
Query: 1 MASKGPRFKFDHETKAKRQKTLEAPKEPRRPKTHWDHVLEEMVWLSKDFESERXXXXXXX 60
MASK + K D+E++AKRQKTLEAPKEPRRPKTHWDHVLEEM WLSKDFESER
Sbjct: 14 MASKSGKSKPDNESRAKRQKTLEAPKEPRRPKTHWDHVLEEMAWLSKDFESERKWKLAQA 73
Query: 61 XXXXXXXXXGFLDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMVLD 120
G LDQA+R E+K+KEEEQRLRKVALNISKD+KKFW K+EKLVLYKHQ+V +
Sbjct: 74 KKVALRASKGMLDQASREERKLKEEEQRLRKVALNISKDMKKFWMKVEKLVLYKHQLVRN 133
Query: 121 EKKKKALDKQLEFLLGQTERYSTMLAENLV---------------------DSTSADK-P 158
EKKKKA+DKQLEFLLGQTERYSTMLAENLV D A++ P
Sbjct: 134 EKKKKAMDKQLEFLLGQTERYSTMLAENLVEPYKQGQNTPSKPLLTIESKSDEERAEQIP 193
Query: 159 AEKNSAEHHIDYQSDAPDHDEEYGVQSXXXXXXXXXXXXXXXALITKEERQEELTALHDE 218
E NS+ +S +P+ DE+Y ++S TK ERQEEL AL +E
Sbjct: 194 PEINSS---AGLESGSPELDEDYDLKSEDETEDDEDTIEEDEKHFTKRERQEELEALQNE 250
Query: 219 MNLPIEELLKRYAGEKGELERPQISQEHSEDGAKIARTGDA--DENGD-LSPVSKIGTND 275
++LP+EELL+RY + E + E+ ++ ++R DEN D L+ V + D
Sbjct: 251 VDLPVEELLRRYTSGRVSRETSPVKDENEDNLTSVSRVTSPVKDENQDNLASVGQDHGED 310
Query: 276 SSVVPGRRCDESNGDIATSTNNLSEY--KDRQSENLKEPSDTAN-----ENFAYDFTDEE 328
+ + E N + S ++ + S +L+ TA+ E+ YDF DE+
Sbjct: 311 KNNLAASEETEGNPSVRRSNDSYGHLAISETHSHDLEPGMTTASVKSRKEDHTYDFNDEQ 370
Query: 329 EDGDFLFGT-EDKDDETTLSEEEKLECVDAIDPKDEIALLQKESDMPVEELLARYKKEQG 387
ED DF+ E+KDDE TL+ EE+L D D +EIALLQKES+MP+E LLARYK++ G
Sbjct: 371 EDVDFVLANGEEKDDEATLAVEEELAKADNEDHVEEIALLQKESEMPIEVLLARYKEDFG 430
Query: 388 --DDRESESDYASALSEDHCDSSVQEDSGQKVPAISVD-EEVKSGEHLASVQSQAEEQWE 444
D E ES+ + A+SED S + + +VD E K S E +
Sbjct: 431 GKDISEDESESSFAVSEDSIVDSDENRQQADLDDDNVDLTECKLDPEPCS--ENVEGTFH 488
Query: 445 EPCENSEKKESEXXXXXXXXXXRSAQPTGNTFSTTKVRTKFPFLLKYSLREYQHIGLDWL 504
E E+++K S+ RSAQPTG T+STTKVRTK PFLLK+SLREYQHIGLDWL
Sbjct: 489 EVAEDNDKDSSDKIADAAAAA-RSAQPTGFTYSTTKVRTKLPFLLKHSLREYQHIGLDWL 547
Query: 505 VTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKW 564
VTMYEKKLNGILADEMGLGKTIMTIALLAHLAC+KGIWGPHLIVVPTSVMLNWETEFLKW
Sbjct: 548 VTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVVPTSVMLNWETEFLKW 607
Query: 565 CPAFKILTYFGSAKERKHKRQGWLKPNSFHVCITTYRLVIQDAKVFKRKKWKYLILDEAH 624
CPAFKILTYFGSAKERK KRQGW+K NSFHVCITTYRLVIQD+K+FKRKKWKYLILDEAH
Sbjct: 608 CPAFKILTYFGSAKERKLKRQGWMKLNSFHVCITTYRLVIQDSKMFKRKKWKYLILDEAH 667
Query: 625 LIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSN 684
LIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWF N
Sbjct: 668 LIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCN 727
Query: 685 PISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLY 744
PI+GM DRLHNVLRPFLLRRLKRDVEKQLP K EHVI+CRLSKRQRNLY
Sbjct: 728 PIAGMVEGQEKINKEVIDRLHNVLRPFLLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLY 787
Query: 745 EDFIASSETQATLASANFFGMISIIMQLRKVCNHPDLFEGRPIISSFDMSGIHIQLXXXX 804
EDFIAS+ETQATL S +FFGMISIIMQLRKVCNHPDLFEGRPI+SSFDM+GI +QL
Sbjct: 788 EDFIASTETQATLTSGSFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDMAGIDVQLSSTI 847
Query: 805 XXXXXXXXXXTVDLEGLGLLFTHLDHRMTSWESDEVQAIETPATLITERSDMA-DLEVIS 863
VDLE LG LFTHLD MTSWE DE++AI TP+ LI +R ++ DLE I
Sbjct: 848 CSLLLESPFSKVDLEALGFLFTHLDFSMTSWEGDEIKAISTPSELIKQRVNLKDDLEAIP 907
Query: 864 PGLKRHKKLQGTNIFEEIQRAIWEERLRQAKDRAAAIAWWNSLRCKKRAIYSTTLRDLVT 923
K K LQGTNIFEEI++A++EER++++KDRAAAIAWWNSLRC+++ YST+LR L+T
Sbjct: 908 LSPKNRKNLQGTNIFEEIRKAVFEERIQESKDRAAAIAWWNSLRCQRKPTYSTSLRTLLT 967
Query: 924 IRHPVHDIHQMKANPVSYLYSSKLADIVLSPVERFQRMTDVVESFMFAIPATRAPSPVCW 983
I+ P+ D +KAN SY+YSS LADIVLSP+ERFQ+M ++VE+F FAIPA R PSP CW
Sbjct: 968 IKGPLDD---LKANCSSYMYSSILADIVLSPIERFQKMIELVEAFTFAIPAARVPSPTCW 1024
Query: 984 CSKNETTVLLHPSFKQQCSDVLSPLLSPIRPAIVRRQLYFPDRRLIQFDCGKLQELAILL 1043
CSK+++ V L PS+K++ +D+LSPLLSPIRPAIVRRQ+YFPDRRLIQFDCGKLQELA+LL
Sbjct: 1025 CSKSDSPVFLSPSYKEKVTDLLSPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAMLL 1084
Query: 1044 RKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKYF 1103
RKLK GHRALIFTQMTKMLD+LEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPK F
Sbjct: 1085 RKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKIF 1144
Query: 1104 LFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTI 1163
LFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTI
Sbjct: 1145 LFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTI 1204
Query: 1164 EENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEIFSGHRTLSIKNTPKEKNQNNGEV 1223
EENILKKANQKR LD+LVIQ+G YNTEFFKKLDPME+FSGH+ L+ K+ + ++
Sbjct: 1205 EENILKKANQKRVLDNLVIQNGEYNTEFFKKLDPMELFSGHKALTTKDEKETSKHCGADI 1264
Query: 1224 SVTNADVEAALKYVEDEADYMALKKVELEEAVDNQEFTEEAIGRLDEDEYVNED----DE 1279
++NADVEAALK EDEADYMALK+VE EEAVDNQEFTEE + R ++DE VNED DE
Sbjct: 1265 PLSNADVEAALKQAEDEADYMALKRVEQEEAVDNQEFTEEPVERPEDDELVNEDDIKADE 1324
Query: 1280 PAELGESVPNLNKENALVLKESDPKEDRPP-SVSAKEDDVDMLADVKQMXXXXXXCGQAI 1338
PA+ G KE + L SD +++R + S++EDD D+L DVKQM GQAI
Sbjct: 1325 PADQGLVAAGPAKEE-MSLLHSDIRDERAVITTSSQEDDTDVLDDVKQMAAAAADAGQAI 1383
Query: 1339 SAFENELRPIDRYAIRFLELWDPIIDKTALESEVRIEDTDWELDRXXXXXXXXXXXXXXX 1398
S+FEN+LRPIDRYAIRFLELWDPII + A+E+E E+ +WELD
Sbjct: 1384 SSFENQLRPIDRYAIRFLELWDPIIVEAAMENEAGFEEKEWELDHIEKYKEEMEAEIDDG 1443
Query: 1399 XXPLVYESWDADFATMAYRQQVEALAQHQLMXXXXXXXXXXXXXXXXXFDSKKIQTPGDX 1458
PLVYE WDADFAT AYRQQVE LAQHQLM + ++
Sbjct: 1444 EEPLVYEKWDADFATEAYRQQVEVLAQHQLMEDLENEAREREAAEVAEMVLTQNESAHVL 1503
Query: 1459 XXXXXXXXXXXXXXXXXXXXLTSGLRSVKE--ETQDLRRDTSPDF----------VSPNS 1506
L + + VK + +D D + +F V+P S
Sbjct: 1504 KPKKKKKAKKAKYKSLKKGSLAAESKHVKSVVKIEDSTDDDNEEFGYVSSSDSDMVTPLS 1563
Query: 1507 AMQKKRKKSILTIDGEEE-IRFKKSKKSKRDLPDVYSSDLE-SNSLVVLDEHAESKPCET 1564
M K KK L +D +EE KK+KK K+ LP+ SD++ + +LDE SKP ++
Sbjct: 1564 RMHMKGKKRDLIVDTDEEKTSKKKAKKHKKSLPN---SDIKYKQTSALLDELEPSKPSDS 1620
Query: 1565 M-VDLDQKTASRCKVRGKISIVPMPGKWIFTIKPEKSKKG---SKDCIPSADFWLPQEDA 1620
M VD + K +R K GK I MP K + IKPEK KKG S+DC+PS D WLPQEDA
Sbjct: 1621 MVVDNELKLTNRGKTVGKKFITSMPIKRVLMIKPEKLKKGNLWSRDCVPSPDSWLPQEDA 1680
Query: 1621 ILCAIVHEYGTNWSLVSETLYGMTAGGAYRGRYRHPIHCCERFRELFQKYVVFSMDTANH 1680
ILCA+VHEYG NW+ VS TLYGMTAGGAYRGRYRHP +CCER+REL Q++++ + D+A +
Sbjct: 1681 ILCAMVHEYGPNWNFVSGTLYGMTAGGAYRGRYRHPAYCCERYRELIQRHILSASDSAVN 1740
Query: 1681 EKINNAGSGKGLLRVTEDNIRMLLGVASEQVNRELLLQKHFFALLSSAWKVASHVNRRQN 1740
EK N GSGK LL+VTE+NIR LL VA+EQ + E+LLQKHF LLSS W+ ++ Q
Sbjct: 1741 EKNLNTGSGKALLKVTEENIRTLLNVAAEQPDTEMLLQKHFSCLLSSIWRTSTRTGNDQM 1800
Query: 1741 PSATCNGLSFDQRFFTSTGQQSQNSLNKPPERMAFSNLAQSKKLIAAALEDAGSSQENDK 1800
S N F+++F S +Q+ KP + M ++L S+KL+ +AL+D+G SQ ++
Sbjct: 1801 LS--LNSPIFNRQFMGSVN-HTQDLARKPWQGMKVTSL--SRKLLESALQDSGPSQPDNT 1855
Query: 1801 IVPSNLGEDMPVRADLLDITLEFQKEDSDSLVSFPPAINLSICGTETEASPSLKKQTVQY 1860
I S L E P+ L++TLEF + + DSL FPP I+LSI G++ S + +
Sbjct: 1856 ISRSRLQETQPINKLGLELTLEFPRGNDDSLNQFPPMISLSIDGSD---SLNYVNEPPGE 1912
Query: 1861 DHLKVFLSXXXXXXXXXXXXXXXDSSGWASSAFPTNDXXXXXXXXVQSSAKQKSAVSDLT 1920
D LK DS GWAS+ FP ND QS K K + SD
Sbjct: 1913 DVLKGSRVAAENRYRNAANACIEDSFGWASNTFPANDLKSRTGTKAQSLGKHKLSASDSA 1972
Query: 1921 KPSRSKSRKASLDPSEHHQARPLLESMPSLKDLRFDMTSFSTGEFGIDMDSNLPFDLNGE 1980
K ++SK RK + E RP + P+LK FD F+ G+ + + + N
Sbjct: 1973 KSTKSKHRKLLAEQLEGAWVRP---NDPNLK---FD---FTPGDREEEEEQEVDEKAN-- 2021
Query: 1981 SSFETENFEVVPHGYVDGLISGLDDCTEFPEYTDI 2015
S E E Y SGLDDC+ + ++I
Sbjct: 2022 -SAEIEMIS-CSQWYDPFFTSGLDDCSLASDISEI 2054
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 313 bits (801), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 150/320 (46%), Positives = 210/320 (65%), Gaps = 17/320 (5%)
Query: 478 TTKVRTKFPFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLAC 537
T+ V+T P L K +L+EYQ GL WLV YE+ LNGILADEMGLGKTI +A LAHLA
Sbjct: 573 TSTVQT--PELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 630
Query: 538 EKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQG------WLKPN 591
EK IWGP L+V P SV+ NW E ++CP K L Y+G +ER R+ + +
Sbjct: 631 EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRMYRRDA 690
Query: 592 SFHVCITTYRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGT 651
FH+ IT+Y+L++ D K F+R KW+Y++LDEA IK+ S RW+TLL+FN + R+LLTGT
Sbjct: 691 GFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGT 750
Query: 652 PLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPF 711
P+QN++ ELW+L+HF+MP +F +H +F +WFS I +RLH +L+PF
Sbjct: 751 PIQNNMAELWALLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPF 810
Query: 712 LLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLYEDFIASSETQATLASAN--------FF 763
+LRR+K+DV +L K E ++C+LS RQ+ Y+ I + + A L +N
Sbjct: 811 MLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQA-IKNKISLAELFDSNRGQFTDKKVL 869
Query: 764 GMISIIMQLRKVCNHPDLFE 783
+++I++QLRKVCNHP+LFE
Sbjct: 870 NLMNIVIQLRKVCNHPELFE 889
Score = 184 bits (467), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 114/154 (74%)
Query: 1032 DCGKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQT 1091
D GKLQ L ILL++L++ HR L+F QMTKML+ILE ++N Y Y+RLDGS+ +R+
Sbjct: 1204 DSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRD 1263
Query: 1092 LMQRFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1151
+++ F F+F+LSTR+GG+GINL ADTVIFY+SDWNP +D QA DR HR+GQT++
Sbjct: 1264 MVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1323
Query: 1152 VHIYRLISESTIEENILKKANQKRALDDLVIQSG 1185
V +YRLI + T+EE IL +A+QK + LV+ G
Sbjct: 1324 VTVYRLICKETVEEKILHRASQKNTVQQLVMTGG 1357
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 299 bits (765), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 210/353 (59%), Gaps = 50/353 (14%)
Query: 478 TTKVRTKFPFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLAC 537
T+ V+T P L K +L+EYQ GL WLV YE+ LNGILADEMGLGKTI +A LAHLA
Sbjct: 573 TSTVQT--PELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAE 630
Query: 538 EKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQG----------- 586
EK IWGP L+V P SV+ NW E ++CP K L Y+G +ER R+
Sbjct: 631 EKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRVMFFST 690
Query: 587 WL----------------------------KPNSFHVCITTYRLVIQDAKVFKRKKWKYL 618
W+ FH+ IT+Y+L++ D K F+R KW+Y+
Sbjct: 691 WIISFDPWAVRQICICKRACNVVRFQTLSDMDAGFHILITSYQLLVTDEKYFRRVKWQYM 750
Query: 619 ILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEF 678
+LDEA IK+ S RW+TLL+FN + R+LLTGTP+QN++ ELW+L+HF+MP +F +H +F
Sbjct: 751 VLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQF 810
Query: 679 KDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLKRDVEKQLPMKREHVIYCRLSK 738
+WFS I +RLH +L+PF+LRR+K+DV +L K E ++C+LS
Sbjct: 811 NEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSS 870
Query: 739 RQRNLYEDFIASSETQATLASAN--------FFGMISIIMQLRKVCNHPDLFE 783
RQ+ Y+ I + + A L +N +++I++QLRKVCNHP+LFE
Sbjct: 871 RQQAFYQA-IKNKISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELFE 922
Score = 184 bits (467), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 114/154 (74%)
Query: 1032 DCGKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQT 1091
D GKLQ L ILL++L++ HR L+F QMTKML+ILE ++N Y Y+RLDGS+ +R+
Sbjct: 1237 DSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRD 1296
Query: 1092 LMQRFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1151
+++ F F+F+LSTR+GG+GINL ADTVIFY+SDWNP +D QA DR HR+GQT++
Sbjct: 1297 MVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD 1356
Query: 1152 VHIYRLISESTIEENILKKANQKRALDDLVIQSG 1185
V +YRLI + T+EE IL +A+QK + LV+ G
Sbjct: 1357 VTVYRLICKETVEEKILHRASQKNTVQQLVMTGG 1390
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 280 bits (716), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 134/313 (42%), Positives = 200/313 (63%), Gaps = 13/313 (4%)
Query: 472 TGNTFSTTKVRTKFPFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIAL 531
+GNT T+ P ++ +R+YQ GL+WL+ +YE +NGILADEMGLGKT+ TI+L
Sbjct: 173 SGNTRLLTQ-----PSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISL 227
Query: 532 LAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPN 591
LA+L +GI GPH++V P S + NW E ++CP + + + G+ +ER+H R+ L
Sbjct: 228 LAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAG 287
Query: 592 SFHVCITTYRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGT 651
F +C+T++ + I++ +R W+Y+I+DEAH IKN S +T+ F++ R+L+TGT
Sbjct: 288 KFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGT 347
Query: 652 PLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPF 711
PLQN+L ELW+L++FL+P +F S + F +WF ISG +LH VLRPF
Sbjct: 348 PLQNNLHELWALLNFLLPEIFSSAETFDEWFQ--ISG-----ENDQQEVVQQLHKVLRPF 400
Query: 712 LLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISIIMQ 771
LLRRLK DVEK LP K+E ++ +S+ Q+ Y+ + + +A A +++I MQ
Sbjct: 401 LLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALL-QKDLEAVNAGGERKRLLNIAMQ 459
Query: 772 LRKVCNHPDLFEG 784
LRK CNHP LF+G
Sbjct: 460 LRKCCNHPYLFQG 472
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/135 (54%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
Query: 1052 RALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNT-NPKYFLFILSTR 1110
R LIF+QMT++LDILE ++ GY Y R+DG+T +ER ++ +N + F+F+LSTR
Sbjct: 508 RVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTR 567
Query: 1111 SGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKK 1170
+GG+GINL AD VI YDSDWNP +D QAQDR HRIGQ +EV ++R +ES IEE ++++
Sbjct: 568 AGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIER 627
Query: 1171 ANQKRALDDLVIQSG 1185
A +K ALD LVIQ G
Sbjct: 628 AYKKLALDALVIQQG 642
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 280 bits (716), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 134/313 (42%), Positives = 200/313 (63%), Gaps = 13/313 (4%)
Query: 472 TGNTFSTTKVRTKFPFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIAL 531
+GNT T+ P ++ +R+YQ GL+WL+ +YE +NGILADEMGLGKT+ TI+L
Sbjct: 173 SGNTRLLTQ-----PSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISL 227
Query: 532 LAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPN 591
LA+L +GI GPH++V P S + NW E ++CP + + + G+ +ER+H R+ L
Sbjct: 228 LAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAG 287
Query: 592 SFHVCITTYRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGT 651
F +C+T++ + I++ +R W+Y+I+DEAH IKN S +T+ F++ R+L+TGT
Sbjct: 288 KFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGT 347
Query: 652 PLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPF 711
PLQN+L ELW+L++FL+P +F S + F +WF ISG +LH VLRPF
Sbjct: 348 PLQNNLHELWALLNFLLPEIFSSAETFDEWFQ--ISG-----ENDQQEVVQQLHKVLRPF 400
Query: 712 LLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISIIMQ 771
LLRRLK DVEK LP K+E ++ +S+ Q+ Y+ + + +A A +++I MQ
Sbjct: 401 LLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALL-QKDLEAVNAGGERKRLLNIAMQ 459
Query: 772 LRKVCNHPDLFEG 784
LRK CNHP LF+G
Sbjct: 460 LRKCCNHPYLFQG 472
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/135 (54%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
Query: 1052 RALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNT-NPKYFLFILSTR 1110
R LIF+QMT++LDILE ++ GY Y R+DG+T +ER ++ +N + F+F+LSTR
Sbjct: 508 RVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTR 567
Query: 1111 SGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKK 1170
+GG+GINL AD VI YDSDWNP +D QAQDR HRIGQ +EV ++R +ES IEE ++++
Sbjct: 568 AGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIER 627
Query: 1171 ANQKRALDDLVIQSG 1185
A +K ALD LVIQ G
Sbjct: 628 AYKKLALDALVIQQG 642
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 280 bits (716), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 134/313 (42%), Positives = 200/313 (63%), Gaps = 13/313 (4%)
Query: 472 TGNTFSTTKVRTKFPFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIAL 531
+GNT T+ P ++ +R+YQ GL+WL+ +YE +NGILADEMGLGKT+ TI+L
Sbjct: 173 SGNTRLLTQ-----PSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISL 227
Query: 532 LAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPN 591
LA+L +GI GPH++V P S + NW E ++CP + + + G+ +ER+H R+ L
Sbjct: 228 LAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAG 287
Query: 592 SFHVCITTYRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGT 651
F +C+T++ + I++ +R W+Y+I+DEAH IKN S +T+ F++ R+L+TGT
Sbjct: 288 KFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGT 347
Query: 652 PLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPF 711
PLQN+L ELW+L++FL+P +F S + F +WF ISG +LH VLRPF
Sbjct: 348 PLQNNLHELWALLNFLLPEIFSSAETFDEWFQ--ISG-----ENDQQEVVQQLHKVLRPF 400
Query: 712 LLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISIIMQ 771
LLRRLK DVEK LP K+E ++ +S+ Q+ Y+ + + +A A +++I MQ
Sbjct: 401 LLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALL-QKDLEAVNAGGERKRLLNIAMQ 459
Query: 772 LRKVCNHPDLFEG 784
LRK CNHP LF+G
Sbjct: 460 LRKCCNHPYLFQG 472
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/135 (54%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
Query: 1052 RALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNT-NPKYFLFILSTR 1110
R LIF+QMT++LDILE ++ GY Y R+DG+T +ER ++ +N + F+F+LSTR
Sbjct: 508 RVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTR 567
Query: 1111 SGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKK 1170
+GG+GINL AD VI YDSDWNP +D QAQDR HRIGQ +EV ++R +ES IEE ++++
Sbjct: 568 AGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIER 627
Query: 1171 ANQKRALDDLVIQSG 1185
A +K ALD LVIQ G
Sbjct: 628 AYKKLALDALVIQQG 642
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 279 bits (714), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/303 (44%), Positives = 194/303 (64%), Gaps = 16/303 (5%)
Query: 486 PFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWGPH 545
P ++ LR+YQ GL+WL+ +YE +NGILADEMGLGKT+ TI+LLA+L +GI GPH
Sbjct: 187 PACIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPH 246
Query: 546 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPNSFHVCITTYRLVIQ 605
++V P S + NW E ++CP + + + G+ +ER+H R+ L F +C+T++ + I+
Sbjct: 247 MVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTSFEMAIK 306
Query: 606 DAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMH 665
+ +R W+Y+I+DEAH IKN S +T+ F++ R+L+TGTPLQN+L ELW+L++
Sbjct: 307 EKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLN 366
Query: 666 FLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLKRDVEKQLP 725
FL+P VF S + F +WF ISG +LH VLRPFLLRRLK DVEK LP
Sbjct: 367 FLLPEVFSSAETFDEWFQ--ISG-----ENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 419
Query: 726 MKREHVIYCRLSKRQRNLYEDFIASSETQATLASANFFG----MISIIMQLRKVCNHPDL 781
K+E ++ +S+ Q+ Y+ + Q L N G +++I MQLRK CNHP L
Sbjct: 420 PKKETILKVGMSQMQKQYYKALL-----QKDLEVVNGGGERKRLLNIAMQLRKCCNHPYL 474
Query: 782 FEG 784
F+G
Sbjct: 475 FQG 477
Score = 158 bits (399), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 72/135 (53%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Query: 1052 RALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNT-NPKYFLFILSTR 1110
R LIF+QMT++LDILE ++ GY Y R+DG+T +ER ++ +N + F+F+LSTR
Sbjct: 513 RVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTR 572
Query: 1111 SGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKK 1170
+GG+GINL AD VI YDSDWNP +D QAQDR HRIGQ +EV ++R +E+ IE ++++
Sbjct: 573 AGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIER 632
Query: 1171 ANQKRALDDLVIQSG 1185
A +K ALD LVIQ G
Sbjct: 633 AYKKLALDALVIQQG 647
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 279 bits (714), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/303 (44%), Positives = 194/303 (64%), Gaps = 16/303 (5%)
Query: 486 PFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWGPH 545
P ++ LR+YQ GL+WL+ +YE +NGILADEMGLGKT+ TI+LLA+L +GI GPH
Sbjct: 187 PACIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPH 246
Query: 546 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPNSFHVCITTYRLVIQ 605
++V P S + NW E ++CP + + + G+ +ER+H R+ L F +C+T++ + I+
Sbjct: 247 MVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGKFDICVTSFEMAIK 306
Query: 606 DAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMH 665
+ +R W+Y+I+DEAH IKN S +T+ F++ R+L+TGTPLQN+L ELW+L++
Sbjct: 307 EKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLN 366
Query: 666 FLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLKRDVEKQLP 725
FL+P VF S + F +WF ISG +LH VLRPFLLRRLK DVEK LP
Sbjct: 367 FLLPEVFSSAETFDEWFQ--ISG-----ENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLP 419
Query: 726 MKREHVIYCRLSKRQRNLYEDFIASSETQATLASANFFG----MISIIMQLRKVCNHPDL 781
K+E ++ +S+ Q+ Y+ + Q L N G +++I MQLRK CNHP L
Sbjct: 420 PKKETILKVGMSQMQKQYYKALL-----QKDLEVVNGGGERKRLLNIAMQLRKCCNHPYL 474
Query: 782 FEG 784
F+G
Sbjct: 475 FQG 477
Score = 158 bits (399), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 72/135 (53%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Query: 1052 RALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNT-NPKYFLFILSTR 1110
R LIF+QMT++LDILE ++ GY Y R+DG+T +ER ++ +N + F+F+LSTR
Sbjct: 513 RVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTR 572
Query: 1111 SGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKK 1170
+GG+GINL AD VI YDSDWNP +D QAQDR HRIGQ +EV ++R +E+ IE ++++
Sbjct: 573 AGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIER 632
Query: 1171 ANQKRALDDLVIQSG 1185
A +K ALD LVIQ G
Sbjct: 633 AYKKLALDALVIQQG 647
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 265 bits (677), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/306 (44%), Positives = 187/306 (61%), Gaps = 4/306 (1%)
Query: 483 TKFPFLLKYS-LREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGI 541
T+ P LL+ LR YQ GL W+V+++ LNGILADEMGLGKTI TI+L+A+L KG+
Sbjct: 392 TEQPSLLEGGELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGV 451
Query: 542 WGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPNSFHVCITTYR 601
GP+LIV P +V+ NW EF W P+ Y G +ERK R+ F+V IT Y
Sbjct: 452 PGPYLIVAPKAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIREKIAGEGKFNVLITHYD 511
Query: 602 LVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLL-NFNSKRRILLTGTPLQNDLMEL 660
L+++D K+ +W Y+I+DE H +KN +S +TLL + KRR+LLTGTP+QN L EL
Sbjct: 512 LIMRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSLQEL 571
Query: 661 WSLMHFLMPHVFQSHQEFKDWFSNPIS--GMXXXXXXXXXXXXDRLHNVLRPFLLRRLKR 718
WSL++FL+PH+F S Q F++WF+ P + G RLH+V+RPF+LRR K
Sbjct: 572 WSLLNFLLPHIFNSVQNFEEWFNAPFADRGNVSLTDEEELLIIHRLHHVIRPFILRRKKD 631
Query: 719 DVEKQLPMKREHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISIIMQLRKVCNH 778
+VEK LP K + ++ C +S Q+ Y+ S + ++ MQLRK CNH
Sbjct: 632 EVEKFLPGKTQVILKCDMSAWQKVYYKQVTDMGRVGLQTGSGKSKSLQNLTMQLRKCCNH 691
Query: 779 PDLFEG 784
P LF G
Sbjct: 692 PYLFVG 697
Score = 182 bits (462), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 119/157 (75%), Gaps = 1/157 (0%)
Query: 1034 GKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLM 1093
GK + L LL KL+ GHR L+F+QMT+++D+LE ++ L Y Y+RLDG+T ++R L+
Sbjct: 713 GKFELLDRLLPKLRKAGHRILLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLL 772
Query: 1094 QRFNT-NPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1152
++FN + YF+F+LSTR+GG+G+NL ADTVI +DSDWNP MDQQA+DR HRIGQ +EV
Sbjct: 773 KQFNEPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEV 832
Query: 1153 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNT 1189
++ L+S ++EE IL++A QK +D VIQ+G +NT
Sbjct: 833 RVFVLVSVGSVEEVILERAKQKMGIDAKVIQAGLFNT 869
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 259 bits (662), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/306 (43%), Positives = 185/306 (60%), Gaps = 5/306 (1%)
Query: 483 TKFPFLLKYS-LREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGI 541
TK P LL+ LR YQ GL W+V++Y NGILADEMGLGKTI TIAL+A+L K +
Sbjct: 375 TKQPSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDL 434
Query: 542 WGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPNSFHVCITTYR 601
GPHLI+ P +V+ NWE EF W P+ Y GS KE++ + + + F+V IT Y
Sbjct: 435 HGPHLILAPKAVLPNWENEFALWAPSISAFLYDGS-KEKRTEIRARIAGGKFNVLITHYD 493
Query: 602 LVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTL-LNFNSKRRILLTGTPLQNDLMEL 660
L+++D K+ W Y+I+DE H +KN + +TL + KRR+LLTGTP+QN L EL
Sbjct: 494 LIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSLQEL 553
Query: 661 WSLMHFLMPHVFQSHQEFKDWFSNPIS--GMXXXXXXXXXXXXDRLHNVLRPFLLRRLKR 718
WSL++FL+PH+F S F++WF+ P + G +RLH+V+RPFLLRR K
Sbjct: 554 WSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINRLHHVIRPFLLRRKKS 613
Query: 719 DVEKQLPMKREHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISIIMQLRKVCNH 778
+VEK LP K + ++ C +S Q+ Y+ + + ++ MQLRK CNH
Sbjct: 614 EVEKFLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSGNGKSKSLQNLTMQLRKCCNH 673
Query: 779 PDLFEG 784
P LF G
Sbjct: 674 PYLFVG 679
Score = 184 bits (468), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 120/157 (76%), Gaps = 1/157 (0%)
Query: 1034 GKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLM 1093
GK + L LL KLK GHR L+F+QMT+++D+LE +++L Y Y+RLDGST ++R L+
Sbjct: 695 GKFELLDRLLPKLKKAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILL 754
Query: 1094 QRFNT-NPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1152
++FN + YF+F+LSTR+GG+G+NL ADT+I +DSDWNP MDQQA+DR HRIGQ +EV
Sbjct: 755 KQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEV 814
Query: 1153 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNT 1189
++ L+S +IEE IL++A QK +D VIQ+G +NT
Sbjct: 815 RVFVLVSIGSIEEVILERAKQKMGIDAKVIQAGLFNT 851
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 241 bits (616), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 175/306 (57%), Gaps = 18/306 (5%)
Query: 488 LLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLI 547
L+ LREYQ GL WLV++Y LNGILADEMGLGKT+ I+L+ +L K GP L+
Sbjct: 749 LVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLV 808
Query: 548 VVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPNSFHVCITTYRLVI--Q 605
VVP+SV+ W++E W P+ + Y G+ ER+ + + F+V +TTY ++
Sbjct: 809 VVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLMNKH 868
Query: 606 DAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMH 665
D + W Y+I+DE H IKN + L ++ S R+LLTGTPLQN+L ELW+L++
Sbjct: 869 DRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLN 928
Query: 666 FLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXX-------DRLHNVLRPFLLRRLKR 718
FL+P++F S ++F WF+ P +RLH VLRPF+LRRLK
Sbjct: 929 FLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLRRLKH 988
Query: 719 DVEKQLPMKREHVIYCRLSKRQRNL---YEDFIASSETQATLASANFFGMISIIMQLRKV 775
VE +LP K E +I C S Q+ L ED + S + +A + + +M+LR +
Sbjct: 989 KVENELPEKIERLIRCEASAYQKLLMKRVEDNLGS------IGNAKSRAVHNSVMELRNI 1042
Query: 776 CNHPDL 781
CNHP L
Sbjct: 1043 CNHPYL 1048
Score = 157 bits (397), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 111/174 (63%), Gaps = 5/174 (2%)
Query: 1016 IVRRQLYFPDRRLIQFDCGKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGY 1075
I+ + P RL CGKL+ L +L KLK+ HR L F+ MT++LD++E ++ L GY
Sbjct: 1059 IIPKHFLPPIVRL----CGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGY 1114
Query: 1076 TYMRLDGSTPPEERQTLMQRFN-TNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPA 1134
Y+RLDG T +R L+ FN + +F+F+LS R+GGVG+NL ADTVI +D+DWNP
Sbjct: 1115 KYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQ 1174
Query: 1135 MDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1188
+D QAQ R HRIGQ ++V + R + +++EE + A K + + I +G ++
Sbjct: 1175 VDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFD 1228
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 241 bits (616), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 175/306 (57%), Gaps = 18/306 (5%)
Query: 488 LLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLI 547
L+ LREYQ GL WLV++Y LNGILADEMGLGKT+ I+L+ +L K GP L+
Sbjct: 749 LVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLV 808
Query: 548 VVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPNSFHVCITTYRLVI--Q 605
VVP+SV+ W++E W P+ + Y G+ ER+ + + F+V +TTY ++
Sbjct: 809 VVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLMNKH 868
Query: 606 DAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMH 665
D + W Y+I+DE H IKN + L ++ S R+LLTGTPLQN+L ELW+L++
Sbjct: 869 DRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLN 928
Query: 666 FLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXX-------DRLHNVLRPFLLRRLKR 718
FL+P++F S ++F WF+ P +RLH VLRPF+LRRLK
Sbjct: 929 FLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLRRLKH 988
Query: 719 DVEKQLPMKREHVIYCRLSKRQRNL---YEDFIASSETQATLASANFFGMISIIMQLRKV 775
VE +LP K E +I C S Q+ L ED + S + +A + + +M+LR +
Sbjct: 989 KVENELPEKIERLIRCEASAYQKLLMKRVEDNLGS------IGNAKSRAVHNSVMELRNI 1042
Query: 776 CNHPDL 781
CNHP L
Sbjct: 1043 CNHPYL 1048
Score = 157 bits (397), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 111/174 (63%), Gaps = 5/174 (2%)
Query: 1016 IVRRQLYFPDRRLIQFDCGKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGY 1075
I+ + P RL CGKL+ L +L KLK+ HR L F+ MT++LD++E ++ L GY
Sbjct: 1059 IIPKHFLPPIVRL----CGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGY 1114
Query: 1076 TYMRLDGSTPPEERQTLMQRFN-TNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPA 1134
Y+RLDG T +R L+ FN + +F+F+LS R+GGVG+NL ADTVI +D+DWNP
Sbjct: 1115 KYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQ 1174
Query: 1135 MDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1188
+D QAQ R HRIGQ ++V + R + +++EE + A K + + I +G ++
Sbjct: 1175 VDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFD 1228
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 241 bits (616), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 175/306 (57%), Gaps = 18/306 (5%)
Query: 488 LLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLI 547
L+ LREYQ GL WLV++Y LNGILADEMGLGKT+ I+L+ +L K GP L+
Sbjct: 749 LVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLV 808
Query: 548 VVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPNSFHVCITTYRLVI--Q 605
VVP+SV+ W++E W P+ + Y G+ ER+ + + F+V +TTY ++
Sbjct: 809 VVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQIVHQKFNVLLTTYEYLMNKH 868
Query: 606 DAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMH 665
D + W Y+I+DE H IKN + L ++ S R+LLTGTPLQN+L ELW+L++
Sbjct: 869 DRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQNNLEELWALLN 928
Query: 666 FLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXX-------DRLHNVLRPFLLRRLKR 718
FL+P++F S ++F WF+ P +RLH VLRPF+LRRLK
Sbjct: 929 FLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLHQVLRPFVLRRLKH 988
Query: 719 DVEKQLPMKREHVIYCRLSKRQRNL---YEDFIASSETQATLASANFFGMISIIMQLRKV 775
VE +LP K E +I C S Q+ L ED + S + +A + + +M+LR +
Sbjct: 989 KVENELPEKIERLIRCEASAYQKLLMKRVEDNLGS------IGNAKSRAVHNSVMELRNI 1042
Query: 776 CNHPDL 781
CNHP L
Sbjct: 1043 CNHPYL 1048
Score = 157 bits (397), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 111/174 (63%), Gaps = 5/174 (2%)
Query: 1016 IVRRQLYFPDRRLIQFDCGKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGY 1075
I+ + P RL CGKL+ L +L KLK+ HR L F+ MT++LD++E ++ L GY
Sbjct: 1059 IIPKHFLPPIVRL----CGKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGY 1114
Query: 1076 TYMRLDGSTPPEERQTLMQRFN-TNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPA 1134
Y+RLDG T +R L+ FN + +F+F+LS R+GGVG+NL ADTVI +D+DWNP
Sbjct: 1115 KYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQ 1174
Query: 1135 MDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYN 1188
+D QAQ R HRIGQ ++V + R + +++EE + A K + + I +G ++
Sbjct: 1175 VDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRASAEHKLGVANQSITAGFFD 1228
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 237 bits (604), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 183/314 (58%), Gaps = 16/314 (5%)
Query: 486 PFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWGPH 545
P L L+ YQ G+ WL+++++ LNGILAD+MGLGKTI TI L+HL G+ GP+
Sbjct: 195 PLLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKG-NGLDGPY 253
Query: 546 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPN---SFHVCITTYRL 602
L++ P S + NW E ++ P+ + Y G +R R+ + F + IT+Y +
Sbjct: 254 LVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEV 313
Query: 603 VIQDAK-VFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 661
+ DAK + + WKY+++DE H +KN K + + L + ++LLTGTPLQN+L ELW
Sbjct: 314 AMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELW 373
Query: 662 SLMHFLMPHVFQSHQEFKDWF----SNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLK 717
SL++F++P +F SH EF+ WF N +LH +LRPF+LRR+K
Sbjct: 374 SLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMK 433
Query: 718 RDVEKQLPMKREHVIYCRLSKRQRNLYEDFIASSETQATLASANFFG------MISIIMQ 771
DVE LP K+E ++Y ++ Q+ +++ + ++ +A L G + ++++Q
Sbjct: 434 CDVELSLPRKKEIIMYATMTDHQKK-FQEHLVNNTLEAHLGENAIRGQGWKGKLNNLVIQ 492
Query: 772 LRKVCNHPDLFEGR 785
LRK CNHPDL +G+
Sbjct: 493 LRKNCNHPDLLQGQ 506
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 114/178 (64%), Gaps = 1/178 (0%)
Query: 1023 FPDRRLIQFDCGKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDG 1082
+P I CGK + L LL +L + H+ LIF+Q TK+LDI++ + + G+ R+DG
Sbjct: 513 YPPVEEIVGQCGKFRLLERLLVRLFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDG 572
Query: 1083 STPPEERQTLMQRF-NTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1141
S +ER+ ++ F + +F+LSTR+GG+GINL ADT I YDSDWNP MD QA D
Sbjct: 573 SVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMD 632
Query: 1142 RCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPME 1199
RCHRIGQT+ VH+YRL + +IE +LK+A K L+ +VI G ++ E K P+E
Sbjct: 633 RCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLEHVVIGQGQFHQERAKSSTPLE 690
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 226 bits (577), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 127/328 (38%), Positives = 191/328 (58%), Gaps = 25/328 (7%)
Query: 477 STTKVRTKFPFLLKY-SLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHL 535
+ +V + P +L+ +LR+YQ +GL W++++Y KLNGILADEMGLGKT+ +AL+A+L
Sbjct: 964 AVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYL 1023
Query: 536 ACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPNSFHV 595
KG +GPHLI+VP +V++NW++E W P+ + Y G+ K+++ K +K F+V
Sbjct: 1024 MEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGT-KDQRSKLFSQVKFEKFNV 1082
Query: 596 CITTYRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQN 655
+TTY ++ D + WKY+I+DEA +K+ +S + L + +RR+LLTGTPLQN
Sbjct: 1083 LVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQN 1142
Query: 656 DLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMXXX--------XXXXXXXXXDRLHNV 707
DL ELWSL++ L+P VF + + F DWF+ P RLH +
Sbjct: 1143 DLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQI 1202
Query: 708 LRPFLLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLYEDFIASSET-------------Q 754
L PF+LRR DVE LP K V+ CR+S Q +Y D+I ++ T +
Sbjct: 1203 LEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVY-DWIKATGTLRVDPDDEKLRAQK 1261
Query: 755 ATLASANFFGMI-SIIMQLRKVCNHPDL 781
+ A + + + M+LRK CNHP L
Sbjct: 1262 NPIYQAKIYRTLNNRCMELRKACNHPLL 1289
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 102/168 (60%), Gaps = 12/168 (7%)
Query: 1022 YFPD--RRLIQFDCGKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMR 1079
YF D + + CGKL L +L KL+ GHR L+F+ MTK+LDILE ++ Y R
Sbjct: 1293 YFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRR 1352
Query: 1080 LDGSTPPEERQTLMQRFN-TNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQ 1138
+DG+T E+R++ + FN + F+F+LS R+ G G+NL ADTV+ YD D NP ++Q
Sbjct: 1353 IDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQ 1412
Query: 1139 AQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGG 1186
A R HRIGQTREV + + E +++K + + D+L +SGG
Sbjct: 1413 AVARAHRIGQTREVKVIYM-------EAVVEKLSSHQKEDEL--RSGG 1451
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 224 bits (571), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 187/328 (57%), Gaps = 24/328 (7%)
Query: 477 STTKVRTKFPFLLKY-SLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHL 535
+ +V + P +L+ +LR+YQ +GL W++++Y KLNGILADEMGLGKT+ +AL+A+L
Sbjct: 964 AVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYL 1023
Query: 536 ACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPNSFHV 595
KG +GPHLI+VP +V++NW++E W P+ + Y G+ +R + F+V
Sbjct: 1024 MEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEVCAMKFNV 1083
Query: 596 CITTYRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQN 655
+TTY ++ D + WKY+I+DEA +K+ +S + L + +RR+LLTGTPLQN
Sbjct: 1084 LVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQN 1143
Query: 656 DLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMXXX--------XXXXXXXXXDRLHNV 707
DL ELWSL++ L+P VF + + F DWF+ P RLH +
Sbjct: 1144 DLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQI 1203
Query: 708 LRPFLLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLYEDFIASSET-------------Q 754
L PF+LRR DVE LP K V+ CR+S Q +Y D+I ++ T +
Sbjct: 1204 LEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVY-DWIKATGTLRVDPDDEKLRAQK 1262
Query: 755 ATLASANFFGMI-SIIMQLRKVCNHPDL 781
+ A + + + M+LRK CNHP L
Sbjct: 1263 NPIYQAKIYRTLNNRCMELRKACNHPLL 1290
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 102/168 (60%), Gaps = 12/168 (7%)
Query: 1022 YFPD--RRLIQFDCGKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMR 1079
YF D + + CGKL L +L KL+ GHR L+F+ MTK+LDILE ++ Y R
Sbjct: 1294 YFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRR 1353
Query: 1080 LDGSTPPEERQTLMQRFN-TNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQ 1138
+DG+T E+R++ + FN + F+F+LS R+ G G+NL ADTV+ YD D NP ++Q
Sbjct: 1354 IDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQ 1413
Query: 1139 AQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGG 1186
A R HRIGQTREV + + E +++K + + D+L +SGG
Sbjct: 1414 AVARAHRIGQTREVKVIYM-------EAVVEKLSSHQKEDEL--RSGG 1452
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 223 bits (569), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 185/324 (57%), Gaps = 20/324 (6%)
Query: 470 QPTGNTFSTTKVRTKFPFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTI 529
Q T S K+ + +L+ +LR+YQ GL++LV + N ILADEMGLGKT+ ++
Sbjct: 602 QRTKGKASLRKLDEQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSV 661
Query: 530 ALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERK-------- 581
++L L + I GP L+VVP S + NW EF KW P I+ Y G+ R+
Sbjct: 662 SMLGFLQNTQQIPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFY 721
Query: 582 -HKRQGWLKPNSFHVCITTYRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNF 640
K+ G +P F+ +TTY +V++D V + KW YL++DEAH +KN ++Q + LL F
Sbjct: 722 NEKKVG--RPIKFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEF 779
Query: 641 NSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXX 700
++K ++L+TGTPLQN + ELW+L+HFL P F++ EF + + N S
Sbjct: 780 STKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSS--------FNESE 831
Query: 701 XDRLHNVLRPFLLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLYEDFIASSETQATLA-S 759
LH LRP +LRR+ +DVEK LP K E ++ +S Q+ Y+ + +
Sbjct: 832 LANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVR 891
Query: 760 ANFFGMISIIMQLRKVCNHPDLFE 783
N +++I+++L+K CNHP LFE
Sbjct: 892 GNQVSLLNIVVELKKCCNHPFLFE 915
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 103/156 (66%), Gaps = 1/156 (0%)
Query: 1029 IQFDCGKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEE 1088
I GKL L LL +L+ HR LIF+QM +MLDIL +++L G+ + RLDGST E
Sbjct: 934 IILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAEL 993
Query: 1089 RQTLMQRFNT-NPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIG 1147
RQ M FN F F+LSTR+GG+GINL ADTV+ +DSDWNP D QA R HRIG
Sbjct: 994 RQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIG 1053
Query: 1148 QTREVHIYRLISESTIEENILKKANQKRALDDLVIQ 1183
Q V+IYR ++ ++EE IL++A +K LD LVIQ
Sbjct: 1054 QQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQ 1089
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 210 bits (534), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 177/327 (54%), Gaps = 36/327 (11%)
Query: 486 PFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWGPH 545
P LK L YQ GL++L + K+ + ILADEMGLGKTI +IALLA L E I PH
Sbjct: 266 PEFLKGLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEENLI--PH 323
Query: 546 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQ-----------------GWL 588
L++ P S + NWE EF W P ++ YFG+A+ R R+ G +
Sbjct: 324 LVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQI 383
Query: 589 KPNS------FHVCITTYRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNS 642
S F V +T+Y ++ D+ V K KW+ +I+DE H +KN S+ + +L ++S
Sbjct: 384 SSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSS 443
Query: 643 KRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXXD 702
RILLTGTPLQN+L EL+ LMHFL F S +EF++ F +
Sbjct: 444 NHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD----------INQEEQIS 493
Query: 703 RLHNVLRPFLLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLYEDFIASSETQATLASANF 762
RLH +L P LLRR+K+DV K +P K+E ++ LS Q+ Y+ + T
Sbjct: 494 RLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVLTKKGGAQ 553
Query: 763 FGMISIIMQLRKVCNHPDLFEG-RPII 788
+ +I+M+LRKVC HP + EG P+I
Sbjct: 554 ISLNNIMMELRKVCCHPYMLEGVEPVI 580
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 100/151 (66%), Gaps = 1/151 (0%)
Query: 1033 CGKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTL 1092
CGKLQ L ++ KLK +GHR LI+TQ MLD+LE + + Y R+DG ERQ
Sbjct: 594 CGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIR 653
Query: 1093 MQRFNT-NPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1151
+ RFN N F F+LSTR+GG+GINL ADTVI YDSDWNP D QA R HR+GQT +
Sbjct: 654 IDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNK 713
Query: 1152 VHIYRLISESTIEENILKKANQKRALDDLVI 1182
V IYRLI+ TIEE +++ +K L+ LV+
Sbjct: 714 VMIYRLINRGTIEERMMQLTKKKMVLEHLVV 744
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 200 bits (508), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 183/342 (53%), Gaps = 52/342 (15%)
Query: 493 LREYQHIGLDWLVTMYEKKLNG-ILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPT 551
L+ YQ +G+++L+ +Y+K + G ILADEMGLGKTI I L L+ GPHL+V P
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 552 SVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWL----KPNSFHVCITTYRLVIQ-- 605
SV+ NWE E KWCP+F +L Y G+A+ + L KP F+V + Y L +
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHGAARAAYSRELNSLSKAGKPPPFNVLLVCYSLFERHS 332
Query: 606 -----DAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNF--NSKRRILLTGTPLQNDLM 658
D KV KR +W +++DEAH +K+ S RW+ L++ N+ +R++LTGTPLQNDL
Sbjct: 333 EQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLH 392
Query: 659 ELWSLMHFLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLKR 718
ELWSL+ F++P +F + + R+ ++L PF+LRRLK
Sbjct: 393 ELWSLLEFMLPDIFTTEN----------VDLKKLLNAEDTELITRMKSILGPFILRRLKS 442
Query: 719 DVEKQLPMKREHVIYCRLSKRQRNLYEDFI-------------ASSETQATLASA----- 760
DV +QL K + V Y + ++Q + Y++ I SS++ +LA A
Sbjct: 443 DVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAKALPKRQ 502
Query: 761 --NFFGMISIIMQLRKVCNHPDLFEGRPIISSFDMSGIHIQL 800
N+F Q RK+ NHP L R I S D+ I +L
Sbjct: 503 ISNYF------TQFRKIANHPLLI--RRIYSDEDVIRIARKL 536
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 111/152 (73%)
Query: 1034 GKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLM 1093
K + LA LL +K GHR LIF+Q T MLDILE +++ G TY RLDGST +RQT++
Sbjct: 588 AKCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIV 647
Query: 1094 QRFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1153
FN + F +LSTR+GG G+NL GADTVI +D D+NP +D+QA+DRCHRIGQT+ V
Sbjct: 648 DTFNNDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVT 707
Query: 1154 IYRLISESTIEENILKKANQKRALDDLVIQSG 1185
I+RL+++ST++ENI + A +K LD V++SG
Sbjct: 708 IFRLVTKSTVDENIYEIAKRKLVLDAAVLESG 739
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 194 bits (494), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 172/311 (55%), Gaps = 31/311 (9%)
Query: 486 PFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWGPH 545
P L +L YQ GL++L + KK N ILADEMGLGKTI +IA LA L E PH
Sbjct: 218 PEFLTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEEN--LSPH 275
Query: 546 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERK-------HKRQGWLKPNSFHVCIT 598
L+V P S + NWE EF W P ++ Y G ++ R + +G + + F V +T
Sbjct: 276 LVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEG--RKSKFDVLLT 333
Query: 599 TYRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLM 658
TY +V V KW +I+DE H +KN KS+ + +L F SK +LLTGTPLQN+L
Sbjct: 334 TYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLN 393
Query: 659 ELWSLMHFLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLKR 718
EL++LMHFL F S ++F+D RLH +L P LLRRLK+
Sbjct: 394 ELFALMHFLDADKFGSLEKFQD--------------INKEEQISRLHQMLAPHLLRRLKK 439
Query: 719 DVEK-QLPMKREHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISIIMQLRKVCN 777
DV K ++P K+E ++ +S +Q+ +Y+ I ++ L + +++M+LR+VC+
Sbjct: 440 DVLKDKVPPKKELILRVDMSSQQKEVYKAVITNN--YQVLTKKRDAKISNVLMKLRQVCS 497
Query: 778 HPDL---FEGR 785
HP L FE R
Sbjct: 498 HPYLLPDFEPR 508
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 96/150 (64%), Gaps = 1/150 (0%)
Query: 1034 GKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLM 1093
GKLQ L ++ KLK +GHR LI+TQ L +LE + + Y R+DG ERQ +
Sbjct: 524 GKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRI 583
Query: 1094 QRFNT-NPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1152
RFN N F F+LSTR+GG+GINL ADTVI YDSDWNP D QA R HR+GQT +V
Sbjct: 584 DRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKV 643
Query: 1153 HIYRLISESTIEENILKKANQKRALDDLVI 1182
IYRLI + T+EE +++ K L+ LV+
Sbjct: 644 MIYRLIHKGTVEERMMEITKNKMLLEHLVV 673
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 194 bits (493), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 172/311 (55%), Gaps = 31/311 (9%)
Query: 486 PFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWGPH 545
P L +L YQ GL++L + KK N ILADEMGLGKTI +IA LA L E PH
Sbjct: 177 PEFLTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEEN--LSPH 234
Query: 546 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERK-------HKRQGWLKPNSFHVCIT 598
L+V P S + NWE EF W P ++ Y G ++ R + +G + + F V +T
Sbjct: 235 LVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEG--RKSKFDVLLT 292
Query: 599 TYRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLM 658
TY +V V KW +I+DE H +KN KS+ + +L F SK +LLTGTPLQN+L
Sbjct: 293 TYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQFTSKHIVLLTGTPLQNNLN 352
Query: 659 ELWSLMHFLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLKR 718
EL++LMHFL F S ++F+D RLH +L P LLRRLK+
Sbjct: 353 ELFALMHFLDADKFGSLEKFQD--------------INKEEQISRLHQMLAPHLLRRLKK 398
Query: 719 DVEK-QLPMKREHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISIIMQLRKVCN 777
DV K ++P K+E ++ +S +Q+ +Y+ I ++ L + +++M+LR+VC+
Sbjct: 399 DVLKDKVPPKKELILRVDMSSQQKEVYKAVITNN--YQVLTKKRDAKISNVLMKLRQVCS 456
Query: 778 HPDL---FEGR 785
HP L FE R
Sbjct: 457 HPYLLPDFEPR 467
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 96/150 (64%), Gaps = 1/150 (0%)
Query: 1034 GKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLM 1093
GKLQ L ++ KLK +GHR LI+TQ L +LE + + Y R+DG ERQ +
Sbjct: 483 GKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRI 542
Query: 1094 QRFNT-NPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1152
RFN N F F+LSTR+GG+GINL ADTVI YDSDWNP D QA R HR+GQT +V
Sbjct: 543 DRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKV 602
Query: 1153 HIYRLISESTIEENILKKANQKRALDDLVI 1182
IYRLI + T+EE +++ K L+ LV+
Sbjct: 603 MIYRLIHKGTVEERMMEITKNKMLLEHLVV 632
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/307 (35%), Positives = 165/307 (53%), Gaps = 24/307 (7%)
Query: 492 SLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPT 551
+L +Q L+WL + K N ILADEMGLGKT+ A L+ L E G+ P L++VP
Sbjct: 688 ALFAHQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFGVARPCLVLVPL 747
Query: 552 SVMLNWETEFLKWCPAFKILTYFGSAKER----------KHKRQGWLKPNS--FHVCITT 599
S M NW +EF W P ++ Y GSAK R K+ KP S F+V +TT
Sbjct: 748 STMPNWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKPTSYKFNVLLTT 807
Query: 600 YRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 659
Y +V+ D+ + W+ L++DE H +KN +S+ + L F+ + R+LLTGTPLQN++ E
Sbjct: 808 YEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGE 867
Query: 660 LWSLMHFLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLKRD 719
+++L++FL P F S F++ F + S + L ++ P +LRRLK+D
Sbjct: 868 MYNLLNFLQPSSFPSLSSFEERFHDLTSA----------EKVEELKKLVAPHMLRRLKKD 917
Query: 720 VEKQLPMKREHVIYCRLSKRQRNLYEDFIASSET--QATLASANFFGMISIIMQLRKVCN 777
+ +P K E ++ L+ Q Y + + + M++I+MQLRKVCN
Sbjct: 918 AMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCN 977
Query: 778 HPDLFEG 784
HP L G
Sbjct: 978 HPYLIPG 984
Score = 160 bits (406), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 109/160 (68%), Gaps = 2/160 (1%)
Query: 1034 GKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINL-YG-YTYMRLDGSTPPEERQT 1091
KL L +L+ L EGHR LIF+QMTK+LDILE ++N+ +G T+ R+DGS +RQ
Sbjct: 1004 AKLTLLHSMLKVLHKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVADRQA 1063
Query: 1092 LMQRFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1151
+ RFN + F+F+LSTR+ G+GINL ADTVI YDSD+NP D QA +R HRIGQ++
Sbjct: 1064 AIARFNQDKNRFVFLLSTRACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKR 1123
Query: 1152 VHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEF 1191
+ +YRL+ +++EE IL+ A +K LD L + G EF
Sbjct: 1124 LLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEF 1163
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 178 bits (452), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 167/330 (50%), Gaps = 41/330 (12%)
Query: 489 LKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEK-------GI 541
LK LR YQ G++WL + KL+GIL D+MGLGKT+ A++A A E+ +
Sbjct: 1447 LKVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDV 1506
Query: 542 WGPHLIVVPTSVMLNWETEFLKWC--PAFKILTYFGSAKERKHKRQGWLKPNSFHVCITT 599
+ P +IV P++++ +W E K+ +L Y GSA++R R+ + N+ +V IT+
Sbjct: 1507 F-PSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQF---NNHNVIITS 1562
Query: 600 YRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 659
Y +V +D + W Y ILDE H+IKN KS+ + ++ R++L+GTP+QN++ME
Sbjct: 1563 YDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIME 1622
Query: 660 LWSLMHFLMPHVFQSHQEFKDWFSNPISG-----MXXXXXXXXXXXXDRLHNVLRPFLLR 714
LWSL FLMP + ++F+ + P+ + LH + PFLLR
Sbjct: 1623 LWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLR 1682
Query: 715 RLKRDVEKQLPMKREHVIYCRLSKRQRNLYEDFIASSETQ-------------------- 754
R K +V LP K YC LS Q LYE F SS Q
Sbjct: 1683 RTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVA 1742
Query: 755 ATLASANFFGMISIIMQLRKVCNHPDLFEG 784
T AS + F + ++ K+C+HP L G
Sbjct: 1743 PTKASTHVFQALQYLL---KLCSHPLLVLG 1769
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 121/217 (55%), Gaps = 18/217 (8%)
Query: 1051 HRALIFTQMTKMLDILEAFI---NLYGYTYMRLDGSTPPEERQTLMQRFNTNPKYFLFIL 1107
HR LIF Q +LDI+E + ++ TYMRLDGS PE+R +++ FN++P + +L
Sbjct: 1831 HRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLL 1890
Query: 1108 STRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENI 1167
+T GG+G+NL ADT++F + DWNP D QA DR HR+GQ R V+++RLI T+EE +
Sbjct: 1891 TTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKV 1950
Query: 1168 LKKANQKRALDDLVIQSGGYNTEFFKKLDPMEIFSGHRT-LSIKNTPKEKNQNNGEVSVT 1226
+ K ++ + VI + + + +++F+ T + K+ +++N +++ T
Sbjct: 1951 MSLQKFKVSVANTVINAENASMKTMNTDQLLDLFASAETSKKGGGSSKKGSEDNDQIAGT 2010
Query: 1227 NADVEAALKYVEDEADYMALKKVELEEAVDNQEFTEE 1263
++A L LEE D ++TEE
Sbjct: 2011 GKGMKAILG--------------NLEELWDQSQYTEE 2033
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 178 bits (451), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 167/330 (50%), Gaps = 41/330 (12%)
Query: 489 LKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEK-------GI 541
LK LR YQ G++WL + KL+GIL D+MGLGKT+ A++A A E+ +
Sbjct: 1478 LKVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDV 1537
Query: 542 WGPHLIVVPTSVMLNWETEFLKWC--PAFKILTYFGSAKERKHKRQGWLKPNSFHVCITT 599
+ P +IV P++++ +W E K+ +L Y GSA++R R+ + N+ +V IT+
Sbjct: 1538 F-PSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQF---NNHNVIITS 1593
Query: 600 YRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLME 659
Y +V +D + W Y ILDE H+IKN KS+ + ++ R++L+GTP+QN++ME
Sbjct: 1594 YDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIME 1653
Query: 660 LWSLMHFLMPHVFQSHQEFKDWFSNPISG-----MXXXXXXXXXXXXDRLHNVLRPFLLR 714
LWSL FLMP + ++F+ + P+ + LH + PFLLR
Sbjct: 1654 LWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPFLLR 1713
Query: 715 RLKRDVEKQLPMKREHVIYCRLSKRQRNLYEDFIASSETQ-------------------- 754
R K +V LP K YC LS Q LYE F SS Q
Sbjct: 1714 RTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSADSGNADVA 1773
Query: 755 ATLASANFFGMISIIMQLRKVCNHPDLFEG 784
T AS + F + ++ K+C+HP L G
Sbjct: 1774 PTKASTHVFQALQYLL---KLCSHPLLVLG 1800
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 121/217 (55%), Gaps = 18/217 (8%)
Query: 1051 HRALIFTQMTKMLDILEAFI---NLYGYTYMRLDGSTPPEERQTLMQRFNTNPKYFLFIL 1107
HR LIF Q +LDI+E + ++ TYMRLDGS PE+R +++ FN++P + +L
Sbjct: 1862 HRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLL 1921
Query: 1108 STRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENI 1167
+T GG+G+NL ADT++F + DWNP D QA DR HR+GQ R V+++RLI T+EE +
Sbjct: 1922 TTHVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKV 1981
Query: 1168 LKKANQKRALDDLVIQSGGYNTEFFKKLDPMEIFSGHRT-LSIKNTPKEKNQNNGEVSVT 1226
+ K ++ + VI + + + +++F+ T + K+ +++N +++ T
Sbjct: 1982 MSLQKFKVSVANTVINAENASMKTMNTDQLLDLFASAETSKKGGGSSKKGSEDNDQIAGT 2041
Query: 1227 NADVEAALKYVEDEADYMALKKVELEEAVDNQEFTEE 1263
++A L LEE D ++TEE
Sbjct: 2042 GKGMKAILG--------------NLEELWDQSQYTEE 2064
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 162/339 (47%), Gaps = 45/339 (13%)
Query: 485 FPFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWGP 544
P + L +YQ +G+ WL ++ ++ GI+ DEMGLGKTI ++ L L K ++ P
Sbjct: 377 IPECIFRKLFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGSLHFSK-MYKP 435
Query: 545 HLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKH-KRQGWL--------------- 588
+I+ P +++ W E KW P F + SA++ H K QG
Sbjct: 436 SIIICPVTLLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKASESDYDSESSVDSDH 495
Query: 589 KPNSFH-----------------VCITTY-RLVIQDAKVFKRKKWKYLILDEAHLIKNWK 630
+P S + + ITTY +L +Q K+ +W Y +LDE H I+N
Sbjct: 496 EPKSKNTKKWDSLLNRVLNSESGLLITTYEQLRLQGEKLLN-IEWGYAVLDEGHRIRNPN 554
Query: 631 SQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPIS-GM 689
S + RI++TG P+QN L ELWSL F+ P F+ FS PI+ G
Sbjct: 555 SDITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGG 614
Query: 690 XXXXXXXXXXXXDRLHNVLR----PFLLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLYE 745
R VLR P+LLRR+K DV L K EHV++C L+ QR+ Y
Sbjct: 615 YANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYR 674
Query: 746 DFIASSETQATL-ASANFFGMISIIMQLRKVCNHPDLFE 783
F+ASSE + + N I + +RK+CNHPDL E
Sbjct: 675 AFLASSEVEQIFDGNRNSLYGIDV---MRKICNHPDLLE 710
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 111/168 (66%), Gaps = 1/168 (0%)
Query: 1034 GKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLM 1093
GK++ +A +L+ K +GHR L+F+Q +MLDILE+F+ Y+Y R+DG TP ++R L+
Sbjct: 727 GKMKVVAEVLKVWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALI 786
Query: 1094 QRFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVH 1153
FN + F+F+L+T+ GG+G NL GA+ VI +D DWNP+ D QA++R RIGQ ++V
Sbjct: 787 DEFNNSEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVT 846
Query: 1154 IYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEIF 1201
+YRLI+ TIEE + + K L + ++++ FFK D ++F
Sbjct: 847 VYRLITRGTIEEKVYHRQIYKHFLTNKILKN-PQQRRFFKARDMKDLF 893
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 168 bits (426), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 158/319 (49%), Gaps = 24/319 (7%)
Query: 487 FLLKYSLREYQHIGLDWLVTMYEKKLNGIL-ADEMGLGKTIMTIALLAHLACEKGIWGPH 545
F + +L+ +Q G+ WL+ Y +N +L D+MGLGKT+ I+ L++L +G+ GP
Sbjct: 45 FGVTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPF 104
Query: 546 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKER-----------KHKRQGWLKPNSFH 594
L++ P SV W +E ++ P ++L Y G R K +G P F
Sbjct: 105 LVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHVKKSSKGHFLP--FD 162
Query: 595 VCITTYRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLL-NFNSKRRILLTGTPL 653
V +TTY + + D + W+Y I+DEA +KN S + LL F RR+L+TGTP+
Sbjct: 163 VLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPI 222
Query: 654 QNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPFLL 713
QN+L ELW+LMHF MP VF + +F F G+ L +L F+L
Sbjct: 223 QNNLTELWALMHFCMPLVFGTLDQFLSAFKETGDGLSGLDVSNDKETYKSLKFILGAFML 282
Query: 714 RRLKRDVEKQ----LPMKREHVIYCRLSKRQRNLYEDFIASSETQATL----ASANFFGM 765
RR K + + LP E + L Q+ +Y I E L +N +
Sbjct: 283 RRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTS-ILRKELPGLLELSSGGSNHTSL 341
Query: 766 ISIIMQLRKVCNHPDLFEG 784
+I++QLRK C+HP LF G
Sbjct: 342 QNIVIQLRKACSHPYLFPG 360
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 101/160 (63%), Gaps = 11/160 (6%)
Query: 1034 GKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLM 1093
GKL L LL++L GHR L+F+QMT LDIL+ F+ L Y+Y RLDGS EER +
Sbjct: 377 GKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAI 436
Query: 1094 QRFNT-----------NPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDR 1142
+ F+ F+F++STR+GGVG+NLV ADTVIFY+ DWNP +D+QA R
Sbjct: 437 KNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQR 496
Query: 1143 CHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVI 1182
HRIGQ V L++E ++EE IL++A +K L V+
Sbjct: 497 AHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVV 536
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 158/313 (50%), Gaps = 21/313 (6%)
Query: 487 FLLKYSLREYQHIGLDWLVTMYEKKLNGIL-ADEMGLGKTIMTIALLAHLACEKGIWGPH 545
F + +L+ +Q G+ WL+ Y +N +L D+MGLGKT+ I+ L++L +G+ GP
Sbjct: 45 FGVTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPF 104
Query: 546 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQ-----GWLKPNSFHVCITTY 600
L++ P SV W +E ++ P ++L Y G R R+ G P F V +TTY
Sbjct: 105 LVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHGHFLP--FDVLLTTY 162
Query: 601 RLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLL-NFNSKRRILLTGTPLQNDLME 659
+ + D + W+Y I+DEA +KN S + LL F RR+L+TGTP+QN+L E
Sbjct: 163 DIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTE 222
Query: 660 LWSLMHFLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLKRD 719
LW+LMHF MP VF + +F F G+ L +L F+LRR K
Sbjct: 223 LWALMHFCMPLVFGTLDQFLSAFKETGDGLDVSNDKETYKS---LKFILGAFMLRRTKSL 279
Query: 720 VEKQ----LPMKREHVIYCRLSKRQRNLYEDFIASSETQATL----ASANFFGMISIIMQ 771
+ + LP E + L Q+ +Y I E L +N + +I++Q
Sbjct: 280 LIESGNLVLPPLTELTVMVPLVSLQKKIYTS-ILRKELPGLLELSSGGSNHTSLQNIVIQ 338
Query: 772 LRKVCNHPDLFEG 784
LRK C+HP LF G
Sbjct: 339 LRKACSHPYLFPG 351
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 102/150 (68%), Gaps = 1/150 (0%)
Query: 1034 GKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLM 1093
GKL L LL++L GHR L+F+QMT LDIL+ F+ L Y+Y RLDGS EER +
Sbjct: 368 GKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAI 427
Query: 1094 QRFNTN-PKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1152
+ F+ + F+F++STR+GGVG+NLV ADTVIFY+ DWNP +D+QA R HRIGQ V
Sbjct: 428 KNFSVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHV 487
Query: 1153 HIYRLISESTIEENILKKANQKRALDDLVI 1182
L++E ++EE IL++A +K L V+
Sbjct: 488 LSINLVTEHSVEEVILRRAERKLQLSHNVV 517
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 154/292 (52%), Gaps = 19/292 (6%)
Query: 486 PFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWG-- 543
P + L E+Q G+ ++ +Y+ GIL D+MGLGKTI TIA LA + + G G
Sbjct: 132 PASINCRLLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGES 191
Query: 544 --------PHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPNSFHV 595
P LI+ P+S++ NWE+EF +W FK+ Y GS ++ ++ LK V
Sbjct: 192 CLLESDKGPVLIICPSSIIHNWESEFSRWASFFKVSVYHGSNRDMILEK---LKARGVEV 248
Query: 596 CITTYRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQN 655
+T++ V W+ +I DEAH +KN KS+ ++ L +K+RI LTGT +QN
Sbjct: 249 LVTSFDTFRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTVMQN 308
Query: 656 DLMELWSLMHFLMPHVFQSHQEFKDWFSNPIS-GMXXXXXXXXXXXXDR----LHNVLRP 710
+ EL++L ++ P + + F+D++ P+ G D+ L ++LR
Sbjct: 309 KISELFNLFEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIADKRKQHLGSLLRK 368
Query: 711 FLLRRLKRDVEKQLPMKRE-HVIYCRLSKRQRNLYEDFIASSETQATLASAN 761
++LRR K + L M +E +V++C++S+ QR +Y+ I E Q + N
Sbjct: 369 YMLRRTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQLPEIQCLVNKDN 420
Score = 147 bits (370), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 111/171 (64%), Gaps = 1/171 (0%)
Query: 1033 CGKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTL 1092
CGK++ L L+ S+G + L+F+ +MLDILE F+ GY++ RLDGSTP RQ+L
Sbjct: 527 CGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQSL 586
Query: 1093 MQRFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1152
+ FN +P +F++ST++GG+G+NLV A+ V+ +D +WNP+ D QAQDR R GQ R V
Sbjct: 587 VDDFNASPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHV 646
Query: 1153 HIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEIFSG 1203
++RL+S ++EE + + K+ L ++ + +G T +F+ + + F G
Sbjct: 647 VVFRLLSAGSLEELVYTRQVYKQQLSNIAV-AGKMETRYFEGVQDCKEFQG 696
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 165/344 (47%), Gaps = 32/344 (9%)
Query: 467 RSAQPTGN-TFSTTKVRTKFPFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKT 525
RS + G+ T + + P + L +Q GL+WL +++ + GIL D+MGLGKT
Sbjct: 350 RSLEDEGSITLTGLNLSYTLPGKIATMLYPHQREGLNWLWSLHTQGKGGILGDDMGLGKT 409
Query: 526 IMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFG-SAKERKHKR 584
+ + LA L K I L+V P +++ +W E + Y+G S K R++
Sbjct: 410 MQICSFLAGLFHSKLI-KRALVVAPKTLLPHWMKELATVGLSQMTREYYGTSTKAREYDL 468
Query: 585 QGWLKPNSFHVCITTYRLVIQDAKVFKR------------KKWKYLILDEAHLIKNWKSQ 632
L+ + +TTY +V + K + KW Y+ILDE HLIKN +Q
Sbjct: 469 HHILQGKG--ILLTTYDIVRNNTKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQ 526
Query: 633 RWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPI-----S 687
R ++LL S RI+++GTP+QN+L ELW+L +F P + FK + + I
Sbjct: 527 RAKSLLEIPSSHRIIISGTPIQNNLKELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDK 586
Query: 688 GMXXXXXXXXXXXXDRLHNVLRPFLLRRLKRDV------EKQLPMKREHVIYCRLSKRQR 741
L ++PF LRRLK +V +L K E V++ RL+ QR
Sbjct: 587 NATDREQRIGSTVAKNLREHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQR 646
Query: 742 NLYEDFIASSETQATLASANFFGMISIIMQLRKVCNHPDLFEGR 785
LYE F+ S + SA ++ + L+K+C+HP L R
Sbjct: 647 QLYEAFLNSE----IVLSAFDGSPLAALTILKKICDHPLLLTKR 686
Score = 124 bits (311), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Query: 1035 KLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQ 1094
KL + LL L EGHR LIF+Q KML++++ + GY+++R+DG+T +R ++
Sbjct: 733 KLSFIMSLLENLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGTTKAPDRLKTVE 792
Query: 1095 RFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHI 1154
F +F+L+++ GG+G+ L AD VI D WNP+ D Q+ DR +RIGQT++V +
Sbjct: 793 EFQEGHVAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIV 852
Query: 1155 YRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMEIFS 1202
YRL++ +T+EE I +K K L + +F + D E+FS
Sbjct: 853 YRLMTSATVEEKIYRKQVYKGGLFKTATEH-KEQIRYFSQQDLRELFS 899
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 160/330 (48%), Gaps = 26/330 (7%)
Query: 488 LLKYSLREYQHIGLDWLVTMYE-----KKLNG-ILADEMGLGKTIMTIALLAHLACEKGI 541
L+K+ LR +Q G+ ++ +NG ILAD+MGLGKT+ +I LL L C+
Sbjct: 176 LVKF-LRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFD 234
Query: 542 WGPH----LIVVPTSVMLNWETEFLKWCP-AFKILTYFGSAKERK-HKRQGWLKPNS-FH 594
P +IV PTS++ NWE E KW +++ S ++ + +P S
Sbjct: 235 GTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSALQ 294
Query: 595 VCITTYRLV-IQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPL 653
V I +Y + +K + + LI DEAH +KN ++ + L + KRR+LL+GTP+
Sbjct: 295 VLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPM 354
Query: 654 QNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPI--SGMXXXXXXXXXXXXDR---LHNVL 708
QNDL E +++++F P F+ ++ PI DR L + +
Sbjct: 355 QNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKV 414
Query: 709 RPFLLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLYEDFIASSETQATLA-SANFFGMIS 767
F+LRR + LP K V+ C+++ Q LY FI+S + LA +A +++
Sbjct: 415 NQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFISSKNLKRALADNAKQTKVLA 474
Query: 768 IIMQLRKVCNHPDLF-----EGRPIISSFD 792
I L+K+CNHP L G P F+
Sbjct: 475 YITALKKLCNHPKLIYDTIKSGNPGTVGFE 504
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 90/150 (60%), Gaps = 2/150 (1%)
Query: 1034 GKLQELAILLRKLKSEGH-RALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTL 1092
GK+ L+ LL L+ + R ++ + T+ LD+ Y ++RLDGST +RQ L
Sbjct: 534 GKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKL 593
Query: 1093 MQRFNTNPK-YFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1151
+ R N K F F+LS+++GG G+NL+GA+ ++ +D DWNPA D+QA R R GQ +
Sbjct: 594 VNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKR 653
Query: 1152 VHIYRLISESTIEENILKKANQKRALDDLV 1181
V++YR +S TIEE + ++ K L ++
Sbjct: 654 VYVYRFLSTGTIEEKVYQRQMSKEGLQKVI 683
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 155/329 (47%), Gaps = 26/329 (7%)
Query: 488 LLKYSLREYQHIGLDWLVTMYE-----KKLNG-ILADEMGLGKTIMTIALLAHLACEKGI 541
L+K+ LR +Q G+ ++ +NG ILAD+MGLGKT+ +I LL L C+
Sbjct: 176 LVKF-LRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFD 234
Query: 542 WGPH----LIVVPTSVMLNWETEFLKWCP-AFKILTYFGSAKERK-HKRQGWLKPNS-FH 594
P +IV PTS++ NWE E KW +++ S ++ + +P S
Sbjct: 235 GTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFTRPRSALQ 294
Query: 595 VCITTYRLV-IQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPL 653
V I +Y + +K + + LI DEAH +KN ++ + L + KRR+LL+GTP+
Sbjct: 295 VLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPM 354
Query: 654 QNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPI--SGMXXXXXXXXXXXXDR---LHNVL 708
QNDL E +++++F P F+ ++ PI DR L + +
Sbjct: 355 QNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKV 414
Query: 709 RPFLLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISI 768
F+LRR + LP K V+ C+++ Q Y + +A +A +++
Sbjct: 415 NQFILRRTNALLSNHLPPKIIEVVCCKMTTLQ-TTYNGCLCMQLKRALADNAKQTKVLAY 473
Query: 769 IMQLRKVCNHPDLF-----EGRPIISSFD 792
I L+K+CNHP L G P F+
Sbjct: 474 ITALKKLCNHPKLIYDTIKSGNPGTVGFE 502
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 90/150 (60%), Gaps = 2/150 (1%)
Query: 1034 GKLQELAILLRKLKSEGH-RALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTL 1092
GK+ L+ LL L+ + R ++ + T+ LD+ Y ++RLDGST +RQ L
Sbjct: 532 GKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKL 591
Query: 1093 MQRFNTNPK-YFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1151
+ R N K F F+LS+++GG G+NL+GA+ ++ +D DWNPA D+QA R R GQ +
Sbjct: 592 VNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKR 651
Query: 1152 VHIYRLISESTIEENILKKANQKRALDDLV 1181
V++YR +S TIEE + ++ K L ++
Sbjct: 652 VYVYRFLSTGTIEEKVYQRQMSKEGLQKVI 681
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 124 bits (310), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 150/336 (44%), Gaps = 40/336 (11%)
Query: 483 TKFPFLLKYSLREYQHIGLDWL----------VTMYEKKLNGILADEMGLGKTIMTIALL 532
+ P + L+ +Q G+ ++ V +K L ILA MGLGKT IA L
Sbjct: 709 VRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFL 768
Query: 533 -AHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPA----FKILTYFGSAKERKHKR-QG 586
+ C LIV P +V+ NW +EF KW P+ +I ++ER+
Sbjct: 769 YTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTK 828
Query: 587 WLKPNS-FHVCITTYRLV-----IQDAKVFK------RKKWKYLILDEAHLIKNWKSQRW 634
W K F + T +R + ++D + R L+ DEAH+IKN K+
Sbjct: 829 WRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTT 888
Query: 635 QTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPI-SGMXXXX 693
Q L +RRI LTG+PLQN+LME + ++ F+ S EF++ F NPI +G
Sbjct: 889 QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNS 948
Query: 694 XXXXXXXXDR----LHNVLRPFLLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLYEDFIA 749
++ L+ L+ F+ R V+K LP K VI +LS QR LY+ F+
Sbjct: 949 TAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLE 1008
Query: 750 ----SSETQATLASANFFGMISIIMQLRKVCNHPDL 781
S NFF ++ Q + NHP +
Sbjct: 1009 LYGFSDGRTDERMRKNFFAAYQVLAQ---ILNHPGI 1041
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 14/163 (8%)
Query: 1034 GKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLY------------GYTYMRLD 1081
GK+ L +L G +AL+F+Q LD++E +++ G + R+D
Sbjct: 1115 GKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRID 1174
Query: 1082 GSTPPEERQTLMQRFNT--NPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQA 1139
G T ERQ L+ RFN N + ++STR+G +GINL A+ VI D WNP D QA
Sbjct: 1175 GKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQA 1234
Query: 1140 QDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVI 1182
R R GQ + V YRL++ TIEE I K+ K L V+
Sbjct: 1235 IFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 124 bits (310), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 150/336 (44%), Gaps = 40/336 (11%)
Query: 483 TKFPFLLKYSLREYQHIGLDWL----------VTMYEKKLNGILADEMGLGKTIMTIALL 532
+ P + L+ +Q G+ ++ V +K L ILA MGLGKT IA L
Sbjct: 709 VRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFL 768
Query: 533 -AHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPA----FKILTYFGSAKERKHKR-QG 586
+ C LIV P +V+ NW +EF KW P+ +I ++ER+
Sbjct: 769 YTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTK 828
Query: 587 WLKPNS-FHVCITTYRLV-----IQDAKVFK------RKKWKYLILDEAHLIKNWKSQRW 634
W K F + T +R + ++D + R L+ DEAH+IKN K+
Sbjct: 829 WRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTT 888
Query: 635 QTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPI-SGMXXXX 693
Q L +RRI LTG+PLQN+LME + ++ F+ S EF++ F NPI +G
Sbjct: 889 QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNS 948
Query: 694 XXXXXXXXDR----LHNVLRPFLLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLYEDFIA 749
++ L+ L+ F+ R V+K LP K VI +LS QR LY+ F+
Sbjct: 949 TAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLE 1008
Query: 750 ----SSETQATLASANFFGMISIIMQLRKVCNHPDL 781
S NFF ++ Q + NHP +
Sbjct: 1009 LYGFSDGRTDERMRKNFFAAYQVLAQ---ILNHPGI 1041
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 14/163 (8%)
Query: 1034 GKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLY------------GYTYMRLD 1081
GK+ L +L G +AL+F+Q LD++E +++ G + R+D
Sbjct: 1115 GKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRID 1174
Query: 1082 GSTPPEERQTLMQRFNT--NPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQA 1139
G T ERQ L+ RFN N + ++STR+G +GINL A+ VI D WNP D QA
Sbjct: 1175 GKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQA 1234
Query: 1140 QDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVI 1182
R R GQ + V YRL++ TIEE I K+ K L V+
Sbjct: 1235 IFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 124 bits (310), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 150/336 (44%), Gaps = 40/336 (11%)
Query: 483 TKFPFLLKYSLREYQHIGLDWL----------VTMYEKKLNGILADEMGLGKTIMTIALL 532
+ P + L+ +Q G+ ++ V +K L ILA MGLGKT IA L
Sbjct: 709 VRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFL 768
Query: 533 -AHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPA----FKILTYFGSAKERKHKR-QG 586
+ C LIV P +V+ NW +EF KW P+ +I ++ER+
Sbjct: 769 YTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERRFDLLTK 828
Query: 587 WLKPNS-FHVCITTYRLV-----IQDAKVFK------RKKWKYLILDEAHLIKNWKSQRW 634
W K F + T +R + ++D + R L+ DEAH+IKN K+
Sbjct: 829 WRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTT 888
Query: 635 QTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPI-SGMXXXX 693
Q L +RRI LTG+PLQN+LME + ++ F+ S EF++ F NPI +G
Sbjct: 889 QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNS 948
Query: 694 XXXXXXXXDR----LHNVLRPFLLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLYEDFIA 749
++ L+ L+ F+ R V+K LP K VI +LS QR LY+ F+
Sbjct: 949 TAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLE 1008
Query: 750 ----SSETQATLASANFFGMISIIMQLRKVCNHPDL 781
S NFF ++ Q + NHP +
Sbjct: 1009 LYGFSDGRTDERMRKNFFAAYQVLAQ---ILNHPGI 1041
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 14/163 (8%)
Query: 1034 GKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLY------------GYTYMRLD 1081
GK+ L +L G +AL+F+Q LD++E +++ G + R+D
Sbjct: 1115 GKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRID 1174
Query: 1082 GSTPPEERQTLMQRFNT--NPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQA 1139
G T ERQ L+ RFN N + ++STR+G +GINL A+ VI D WNP D QA
Sbjct: 1175 GKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQA 1234
Query: 1140 QDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVI 1182
R R GQ + V YRL++ TIEE I K+ K L V+
Sbjct: 1235 IFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1277
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 145/320 (45%), Gaps = 29/320 (9%)
Query: 483 TKFPFLLKYSLREYQHIGLDWL----------VTMYEKKLNGILADEMGLGKTIMTIALL 532
+ P + L+ +Q G+ ++ V +K L ILA MGLGKT IA L
Sbjct: 709 VRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFL 768
Query: 533 -AHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPA-FKILTYFGSAKERKHKRQGWLKP 590
+ C LIV P +V+ NW +EF KW P+ K L F ++K + +
Sbjct: 769 YTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRYK--FFYER 826
Query: 591 NSFHVCITTYRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTG 650
N + V I +A R L+ DEAH+IKN K+ Q L +RRI LTG
Sbjct: 827 NFWGVKDLNAARGICNA---LRDGPDILVCDEAHIIKNTKADTTQALKQVKCQRRIALTG 883
Query: 651 TPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPI-SGMXXXXXXXXXXXXDR----LH 705
+PLQN+LME + ++ F+ S EF++ F NPI +G ++ L+
Sbjct: 884 SPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILY 943
Query: 706 NVLRPFLLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLYEDFIA----SSETQATLASAN 761
L+ F+ R V+K LP K VI +LS QR LY+ F+ S N
Sbjct: 944 EQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLELYGFSDGRTDERMRKN 1003
Query: 762 FFGMISIIMQLRKVCNHPDL 781
FF ++ Q + NHP +
Sbjct: 1004 FFAAYQVLAQ---ILNHPGI 1020
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 14/163 (8%)
Query: 1034 GKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFINLY------------GYTYMRLD 1081
GK+ L +L G +AL+F+Q LD++E +++ G + R+D
Sbjct: 1094 GKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRID 1153
Query: 1082 GSTPPEERQTLMQRFNT--NPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQA 1139
G T ERQ L+ RFN N + ++STR+G +GINL A+ VI D WNP D QA
Sbjct: 1154 GKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQA 1213
Query: 1140 QDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVI 1182
R R GQ + V YRL++ TIEE I K+ K L V+
Sbjct: 1214 IFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVV 1256
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 141/322 (43%), Gaps = 61/322 (18%)
Query: 513 NGILADEMGLGKTIMTIALL----------------------------AHLACEK-GIWG 543
GILAD MGLGKT+MTIAL+ H+A G
Sbjct: 682 GGILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHMALTTVKAKG 741
Query: 544 PHLIVVPTSVMLNWETEFLKWCP--AFKILTYFGSAKERKHKRQGWLKPNSFHVCITTYR 601
LI+ P +++ W+ E +L Y+G +R H + S V +TTY
Sbjct: 742 GTLIICPMALLSQWKDELETHSKPDTVSVLVYYGG--DRTHDAKAI---ASHDVVLTTYG 796
Query: 602 LVIQDAK------VFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQN 655
++ K +F R W ++LDEAH IK+WK+Q + +S R LTGTPLQN
Sbjct: 797 VLTSAYKQDMANSIFHRIDWYRIVLDEAHTIKSWKTQAAKATFELSSHCRWCLTGTPLQN 856
Query: 656 DLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRR 715
L +L+SL+ FL + + W+S I + +LRP +LRR
Sbjct: 857 KLEDLYSLLCFLHVEPWCNWA----WWSKLIQ---KPYENGDPRGLKLIKAILRPLMLRR 909
Query: 716 LK--RDVEK----QLPMKREHVIYCRLSKRQRNLYEDFIASSETQATLASA------NFF 763
K RD E +LP VI C S+ +R+ Y S+ Q A N+
Sbjct: 910 TKETRDKEGSLILELPPTDVQVIECEQSEAERDFYTALFKRSKVQFDQFVAQGKVLHNYA 969
Query: 764 GMISIIMQLRKVCNHPDLFEGR 785
++ ++++LR+ CNHP L R
Sbjct: 970 NILELLLRLRQCCNHPFLVMSR 991
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 980 PVCWCSKNETTVLLHPSFKQQCSDVL-------SPLLSPIRPAIVRRQ--LYFPDRRLIQ 1030
P+C S ++ +L P + C + L S L PI I++R + P + +
Sbjct: 1041 PICLESADDP--VLTPCAHRMCRECLLTSWRSPSCGLCPICRTILKRTELISCPTDSIFR 1098
Query: 1031 FDC-------GKLQELAILLRKLK--SEGHRALIFTQMTKMLDILEAFINLYGYTYMRLD 1081
D K+ EL L K+K G ++++F+Q T LD+LE + G+ ++R D
Sbjct: 1099 VDVVKNWKESSKVSELLKCLEKIKKSGSGEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFD 1158
Query: 1082 GSTPPEERQTLMQRFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQD 1141
G + R+ +++ FN + + ++S ++GGVG+NL A +V D WNPA+++QA
Sbjct: 1159 GKLAQKGREKVLKEFNETKQKTILLMSLKAGGVGLNLTAASSVFLMDPWWNPAVEEQAIM 1218
Query: 1142 RCHRIGQTREVHIYRLISESTIEENILKKANQKRAL 1177
R HRIGQ R V + R I + T+EE + + +K+ +
Sbjct: 1219 RIHRIGQKRTVFVRRFIVKDTVEERMQQVQARKQRM 1254
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 144/358 (40%), Gaps = 78/358 (21%)
Query: 488 LLKYSLREYQHIGLDWLV---TMYEKKLNGILADEMGLGKTIMTIALL------AHLACE 538
+L SL +Q I L W+ T GILAD+ GLGKT+ TIAL+ +L CE
Sbjct: 537 VLAVSLLRHQRIALSWMSQKETSGNPCFGGILADDQGLGKTVSTIALILTERSTPYLPCE 596
Query: 539 K-----GI---------------------------WGPHLIVVPTSVMLNWETEFLKWC- 565
+ G LIV PTS+M W E K
Sbjct: 597 EDSKNGGCNQSDHSQVVFNENKVVEDSLCKMRGRPAAGTLIVCPTSLMRQWADELRKKVT 656
Query: 566 --PAFKILTYFGSAKERKHKRQGWLKPNSFHVCITTYRLVIQDAKV-----------FKR 612
+L Y G ++ + + V ITTY LV + + +
Sbjct: 657 LEAHLSVLVYHGCSRTKDPHELA-----KYDVVITTYSLVSKRKHMDCEPVEFLSGPLAQ 711
Query: 613 KKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVF 672
W ++LDEA IKN+K+Q ++KRR L+GTP+QN + +L+S FL +
Sbjct: 712 VSWFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLKYDPY 771
Query: 673 QSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLKRDVEK-----QLPMK 727
S+Q F + NPIS L +L+ +LRR K + LP K
Sbjct: 772 SSYQTFCETIKNPISSYPGEGYKT-------LQAILKKVMLRRTKDTLLDGKPVISLPPK 824
Query: 728 REHVIYCRLSKRQRNLYEDFIASSETQ------ATLASANFFGMISIIMQLRKVCNHP 779
+ +K +R+ Y S Q A N+ ++ ++++LR+ C HP
Sbjct: 825 SIELRRVDFTKEERDFYSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQACGHP 882
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 75/128 (58%)
Query: 1050 GHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKYFLFILST 1109
G +A++FTQ TKMLD+LEA + G Y R DG R +Q FNT P + I+S
Sbjct: 1071 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSVMIMSL 1130
Query: 1110 RSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILK 1169
++ +G+N+V A VI D WNP + QA DR HRIGQTR V + R + T+E+ IL
Sbjct: 1131 KAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRILA 1190
Query: 1170 KANQKRAL 1177
+KR +
Sbjct: 1191 LQQKKRKM 1198
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 75/128 (58%)
Query: 1050 GHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKYFLFILST 1109
G +A++FTQ TKMLD+LEA + G Y R DG R +Q FNT P + I+S
Sbjct: 1114 GEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSVMIMSL 1173
Query: 1110 RSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILK 1169
++ +G+N+V A VI D WNP + QA DR HRIGQTR V + R + T+E+ IL
Sbjct: 1174 KAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRILA 1233
Query: 1170 KANQKRAL 1177
+KR +
Sbjct: 1234 LQQKKRKM 1241
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 148/402 (36%), Gaps = 122/402 (30%)
Query: 488 LLKYSLREYQHIGLDWLV---TMYEKKLNGILADEMGLGKTIMTIALL------AHLACE 538
+L SL +Q I L W+ T GILAD+ GLGKT+ TIAL+ +L CE
Sbjct: 536 VLAVSLLRHQRIALSWMSQKETSGNPCFGGILADDQGLGKTVSTIALILTERSTPYLPCE 595
Query: 539 K-----GI---------------------------WGPHLIVVPTSVMLNWETEFLKWC- 565
+ G LIV PTS+M W E K
Sbjct: 596 EDSKNGGCNQSDHSQVVFNENKVVEDSLCKMRGRPAAGTLIVCPTSLMRQWADELRKKVT 655
Query: 566 --PAFKILTYFGSAKERKHKRQGWLKPNSFHVCITTYRLV------------------IQ 605
+L Y G ++ + + V ITTY LV I
Sbjct: 656 LEAHLSVLVYHGCSRTKDPHELA-----KYDVVITTYSLVSVEVPKQPRDRADEEKGGIH 710
Query: 606 DAKV-------------------FKRKK------------------WKYLILDEAHLIKN 628
D V K++K W ++LDEA IKN
Sbjct: 711 DGGVESVGFGSNKKDLPNSQKKGTKKRKHMDCEPVEFLSGPLAQVSWFRVVLDEAQSIKN 770
Query: 629 WKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISG 688
+K+Q ++KRR L+GTP+QN + +L+S FL + S+Q F + NPIS
Sbjct: 771 YKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSYFRFLKYDPYSSYQTFCETIKNPISS 830
Query: 689 MXXXXXXXXXXXXDRLHNVLRPFLLRRLKRDVEK-----QLPMKREHVIYCRLSKRQRNL 743
L +L+ +LRR K + LP K + +K +R+
Sbjct: 831 YPGEGYKT-------LQAILKKVMLRRTKDTLLDGKPVISLPPKSIELRRVDFTKEERDF 883
Query: 744 YEDFIASSETQ------ATLASANFFGMISIIMQLRKVCNHP 779
Y S Q A N+ ++ ++++LR+ C HP
Sbjct: 884 YSKLECDSRDQFKEYAEAGTVKQNYVNILLMLLRLRQACGHP 925
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 82/125 (65%)
Query: 1043 LRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKY 1102
L L+S G ++++F+Q T LD+L+ ++ ++++RLDG+ ++R+ +++ F+ +
Sbjct: 872 LEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFSEDGSI 931
Query: 1103 FLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISEST 1162
+ ++S ++GGVGINL A D WNPA+++QA R HRIGQT+EV I R I + T
Sbjct: 932 LVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGT 991
Query: 1163 IEENI 1167
+EE +
Sbjct: 992 VEERM 996
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 145/341 (42%), Gaps = 80/341 (23%)
Query: 513 NGILADEMGLGKTIMTIALL-AHL--ACEKGIWGPH------------------------ 545
GILAD MGLGKT+MTI+LL AH A G P+
Sbjct: 414 GGILADAMGLGKTVMTISLLLAHSWKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKF 473
Query: 546 -------------------LIVVPTSVMLNWETEF-LKWCP-AFKILTYFGSAKERKHKR 584
LIV P +++ W+TE + P + + ++G ++ + K
Sbjct: 474 LGFDKRLLEQKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAK- 532
Query: 585 QGWLKPNSFHVCITTYRLVIQ--------DAKVFKRKKWKYLILDEAHLIKNWKSQRWQT 636
L S V ITTY ++ D + +W ++LDEAH IKN KSQ
Sbjct: 533 ---LLSQS-DVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLA 588
Query: 637 LLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMXXXXXXX 696
+ RR LTGTP+QN+L +L+SL+ FL + + + P
Sbjct: 589 AAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFE-------EG 641
Query: 697 XXXXXDRLHNVLRPFLLRRLKRDVEKQ------LPMKREHVIYCRLSKRQRNLYEDFIAS 750
+ ++L+P +LRR K +++ LP VIYC LS+ +R+ Y+
Sbjct: 642 DERGLKLVQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCELSESERDFYDALFKR 701
Query: 751 SE------TQATLASANFFGMISIIMQLRKVCNHPDLFEGR 785
S+ + N+ ++ ++++LR+ C+HP L R
Sbjct: 702 SKVKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFLVMSR 742
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 79/132 (59%)
Query: 1046 LKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKYFLF 1105
+K G +A++F+Q TKML++LEA + Y RLDG+ R +Q FNT P+ +
Sbjct: 1119 IKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVM 1178
Query: 1106 ILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEE 1165
I+S ++ +G+N+V A V+ D WNP + QA DR HRIGQTR V + R + T+E+
Sbjct: 1179 IMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVED 1238
Query: 1166 NILKKANQKRAL 1177
IL +KR +
Sbjct: 1239 RILALQQKKRMM 1250
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 117/305 (38%), Gaps = 78/305 (25%)
Query: 546 LIVVPTSVMLNWETEFLKWCPA---FKILTYFGSAKERKHKRQGWLKPNSFHVCITTYRL 602
L+V PTSVM W E K + +L Y GS++ + + V +TT+ +
Sbjct: 668 LVVCPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTKDPHELA-----KYDVVVTTFSI 722
Query: 603 V-------------------IQDAKVF--------KRK---------------------- 613
V + D KRK
Sbjct: 723 VSMEVPKQPLVDDEDEEKDGVHDGGTAATGFCSNKKRKYPPDSKKKGSKKKKVEFLSGPL 782
Query: 614 ---KWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPH 670
W ++LDEA IKN+K+Q + +KRR L+GTP+QN + +L+S FL
Sbjct: 783 AKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYD 842
Query: 671 VFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLKRDVEK-----QLP 725
+ S+ F NPI+ +L +L+ +LRR K + LP
Sbjct: 843 PYSSYVLFCSTIKNPIT-------RNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLP 895
Query: 726 MKREHVIYCRLSKRQRNLYEDFIASSETQ------ATLASANFFGMISIIMQLRKVCNHP 779
K + + +R+ Y A S TQ A N+ ++ ++++LR+ C+HP
Sbjct: 896 PKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHP 955
Query: 780 DLFEG 784
L G
Sbjct: 956 LLVNG 960
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 79/132 (59%)
Query: 1046 LKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKYFLF 1105
+K G +A++F+Q TKML++LEA + Y RLDG+ R +Q FNT P+ +
Sbjct: 961 IKVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVM 1020
Query: 1106 ILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEE 1165
I+S ++ +G+N+V A V+ D WNP + QA DR HRIGQTR V + R + T+E+
Sbjct: 1021 IMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVED 1080
Query: 1166 NILKKANQKRAL 1177
IL +KR +
Sbjct: 1081 RILALQQKKRMM 1092
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 117/305 (38%), Gaps = 78/305 (25%)
Query: 546 LIVVPTSVMLNWETEFLKWCPA---FKILTYFGSAKERKHKRQGWLKPNSFHVCITTYRL 602
L+V PTSVM W E K + +L Y GS++ + + V +TT+ +
Sbjct: 510 LVVCPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTKDPHELA-----KYDVVVTTFSI 564
Query: 603 V-------------------IQDAKVF--------KRK---------------------- 613
V + D KRK
Sbjct: 565 VSMEVPKQPLVDDEDEEKDGVHDGGTAATGFCSNKKRKYPPDSKKKGSKKKKVEFLSGPL 624
Query: 614 ---KWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPH 670
W ++LDEA IKN+K+Q + +KRR L+GTP+QN + +L+S FL
Sbjct: 625 AKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYD 684
Query: 671 VFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLKRDVEK-----QLP 725
+ S+ F NPI+ +L +L+ +LRR K + LP
Sbjct: 685 PYSSYVLFCSTIKNPIT-------RNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLP 737
Query: 726 MKREHVIYCRLSKRQRNLYEDFIASSETQ------ATLASANFFGMISIIMQLRKVCNHP 779
K + + +R+ Y A S TQ A N+ ++ ++++LR+ C+HP
Sbjct: 738 PKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHP 797
Query: 780 DLFEG 784
L G
Sbjct: 798 LLVNG 802
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 76/123 (61%)
Query: 1052 RALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKYFLFILSTRS 1111
+A++F+Q T LD++ + G + ++L GS R T + +F +P +F++S ++
Sbjct: 682 KAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCRVFLMSLKA 741
Query: 1112 GGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKA 1171
GGV +NL A V D WNPA+++QAQDR HRIGQ + + + R I E+T+EE IL+
Sbjct: 742 GGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEERILRLQ 801
Query: 1172 NQK 1174
+K
Sbjct: 802 KKK 804
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 142/342 (41%), Gaps = 71/342 (20%)
Query: 486 PFLLKYSLREYQHIGLDWLVTMYEKK---LNGILADEMGLGKTIMTIAL--LAHLACE-- 538
P +L L +Q I L+W+ ++ L GILAD+ GLGKTI TI+L L L +
Sbjct: 46 PGVLTVPLMRHQKIALNWMRKKEKRSRHCLGGILADDQGLGKTISTISLILLQKLKSQSK 105
Query: 539 ----KGI-WGPHLIVVPTSVMLNWETEFLKWCP---AFKILTYFGSAKERKHKRQGWLKP 590
KG G LIV P SV+ W E + +L + GS H+ + +
Sbjct: 106 QRKRKGQNSGGTLIVCPASVVKQWAREVKEKVSDEHKLSVLVHHGS-----HRTKDPTEI 160
Query: 591 NSFHVCITTYRLVIQDA----------------------------KVFKRKKWKYLILDE 622
+ V +TTY +V + R +W ++LDE
Sbjct: 161 AIYDVVMTTYAIVTNEVPQNPMLNRYDSMRGRESLDGSSLIQPHVGALGRVRWLRVVLDE 220
Query: 623 AHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWF 682
AH IKN ++ + + +KRR LTGTP++N + +L+S FL H + F
Sbjct: 221 AHTIKNHRTLIAKACFSLRAKRRWCLTGTPIKNKVDDLYSYFRFLRYHPYAMCNSFHQRI 280
Query: 683 SNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLKRDVEKQLPMKREHVIYCRLSKRQRN 742
PI +L +LR +LRR K E Y +L R
Sbjct: 281 KAPID-------KKPLHGYKKLQAILRGIMLRRTK-----------EWSFYRKLELNSRW 322
Query: 743 LYEDFIASSETQATLASANFFGMISIIMQLRKVCNHPDLFEG 784
+E++ A +A ++ ++++LR+ CNHP L G
Sbjct: 323 KFEEYAADGTLHEHMAY-----LLVMLLRLRQACNHPQLVNG 359
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 1105 FILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIE 1164
++S ++G +G+N+V A VI D WNP + QA DR HRIGQTR V + R+ ++T+E
Sbjct: 510 MLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTVE 569
Query: 1165 ENILKKANQKRAL 1177
E IL +KR +
Sbjct: 570 ERILTLHERKRNI 582
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 83/131 (63%), Gaps = 4/131 (3%)
Query: 1052 RALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKY---FLFILS 1108
++++F+Q KML +LE + G+T +RLDG+ ++R ++ F NP+ + + S
Sbjct: 708 KSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFG-NPELTGPVVLLAS 766
Query: 1109 TRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENIL 1168
++ G GINL A V +D WNPA+++QA DR HRIGQ +EV + R+I+ ++IEE +L
Sbjct: 767 LKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVL 826
Query: 1169 KKANQKRALDD 1179
+ +K+ L +
Sbjct: 827 ELQQKKKNLAN 837
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 116/259 (44%), Gaps = 22/259 (8%)
Query: 546 LIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPNSFHVCITTY-RLVI 604
LIV P SV+ W T+ + + Y ER +K + + +TTY L +
Sbjct: 342 LIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDVNELMK---YDIVLTTYGTLAV 398
Query: 605 QDA---KVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELW 661
+++ K+ +W +ILDEAH IKN +Q+ + + + RR +TGTP+QN +L+
Sbjct: 399 EESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFDLY 458
Query: 662 SLMHFLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLKRDVE 721
SLM FL F ++ P+ RL ++ LRR K
Sbjct: 459 SLMAFLRFEPFSIKSYWQSLIQRPLG-------QGNKKGLSRLQVLMATISLRRTKEKSL 511
Query: 722 KQLPMKREHVIYCRLSKRQRNLYEDF--IASSETQATLASA----NFFGMISIIMQLRKV 775
LP K Y LS +R LY+ A Q + + N+ ++SII++LR++
Sbjct: 512 IGLPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQL 571
Query: 776 CNHPDLFEGRPIISSFDMS 794
C+ D+ P + SF S
Sbjct: 572 CD--DMSLCPPELRSFTTS 588
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 75/126 (59%)
Query: 1052 RALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKYFLFILSTRS 1111
+ +IF+Q T MLD++E I G + RLDG+ R ++ F+ P + ++S ++
Sbjct: 894 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVKVMLMSLKA 953
Query: 1112 GGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKA 1171
G +G+N+V A VI D WNP + QA DR HRIGQTR V + R+ + T+E+ ILK
Sbjct: 954 GNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILKLQ 1013
Query: 1172 NQKRAL 1177
+KR +
Sbjct: 1014 EEKRTM 1019
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 606 DAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMH 665
D + W ++LDEA IKN+++Q ++ +KRR L+GTP+QN + +L+S
Sbjct: 533 DCGPLGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFR 592
Query: 666 FLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLKRDVEK--- 722
FL + ++ F PIS +L VLR +LRR K +
Sbjct: 593 FLRYDPYAVYKSFYSTIKVPIS-------RNSCQGYKKLQAVLRAIMLRRTKGTLLDGKP 645
Query: 723 --QLPMKREHVIYCRLSKRQRNLYEDFIASSETQ------ATLASANFFGMISIIMQLRK 774
LP K ++ S +R+ Y+ A S +Q A S N+ ++ ++++LR+
Sbjct: 646 IINLPPKVVNLSQVDFSVAERSFYKKLEADSRSQFKAYADAGTLSQNYANILLLLLRLRQ 705
Query: 775 VCNHPDLFE 783
C+HP L +
Sbjct: 706 ACDHPQLVK 714
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 72/126 (57%)
Query: 1052 RALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKYFLFILSTRS 1111
+A++F+Q T LD++ + G + ++L GS + ++ F P + ++S ++
Sbjct: 527 KAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKEEPDCRVLLMSLQA 586
Query: 1112 GGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKA 1171
GGV +NL A V D WNPA+++QAQDR HRIGQ + V + R I E T+EE IL
Sbjct: 587 GGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTLQ 646
Query: 1172 NQKRAL 1177
+K L
Sbjct: 647 KKKEDL 652
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 138/328 (42%), Gaps = 47/328 (14%)
Query: 486 PFLLKYSLREYQHIGLDWLVTMYEKKL--NGILADEMGLGKTIMTIALL-----AHLACE 538
P L L +YQ L W T+ E GILADEMG+GKTI I+L+ A
Sbjct: 127 PLDLIIPLLKYQKEFLAW-ATIQELSAVRGGILADEMGMGKTIQAISLVLARREVDRAKS 185
Query: 539 KGIWGPHLIVVPTSVMLNW--ETEFLKWCPAFKILTYFGSAKERKHKRQGWLKPNSFHVC 596
+ G L++VP + W E L + ++L Y G +++ + K ++
Sbjct: 186 REAVGHTLVLVPPVALSQWLDEISRLTSPGSTRVLQYHGPKRDKNVQ-----KLMNYDFV 240
Query: 597 ITTYRLVIQDAKV----------FKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRI 646
+TT +V + + KW +I+DEAH IKN S+ + + + R
Sbjct: 241 LTTSPIVENEYRKDEGVDETMSPLHSIKWNRIIVDEAHDIKNRSSRTAKAVFALEATYRW 300
Query: 647 LLTGTPLQNDLMELWSLMHFLMPHVFQS-HQEFK------DWFSNPISGMXXXXXXXXXX 699
L+GTPLQND+ EL+SL+ + + F S + F + N
Sbjct: 301 ALSGTPLQNDVDELYSLVSYSFLNFFYSTYASFAFRHTHITFARNVTVKFLIGGNILPLS 360
Query: 700 XXDRLHNVLRPFLLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLYEDFIASSET------ 753
R+ NV +++ + L KR LS + + YE S+T
Sbjct: 361 IPVRIENVPAVLIMQ-----INTSLGGKRRDA----LSVVEADFYESLYKVSKTTFDGYI 411
Query: 754 QATLASANFFGMISIIMQLRKVCNHPDL 781
QA N+ + ++++LR+ +HP L
Sbjct: 412 QAGTLMNNYAHIFGLLIRLRQAVDHPYL 439
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 75/126 (59%)
Query: 1052 RALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKYFLFILSTRS 1111
+ +IF+Q T MLD++E + + RLDG+ R ++ F+ +P + I+S ++
Sbjct: 828 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKA 887
Query: 1112 GGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKA 1171
G +G+N++ A VI D WNP + QA DR HRIGQTR V + R+ ++T+E+ IL
Sbjct: 888 GNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILALQ 947
Query: 1172 NQKRAL 1177
+KR +
Sbjct: 948 EEKRKM 953
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 18/189 (9%)
Query: 606 DAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMH 665
D+ + W ++LDEA IKN ++Q + +KRR L+GTP+QN + +L+S
Sbjct: 462 DSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFR 521
Query: 666 FLMPHVFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLKRDVEK--- 722
FL + ++ F PIS +L VLR +LRR K +
Sbjct: 522 FLKYDPYAVYKSFCHQIKGPIS-------RNSLQGYKKLQAVLRAIMLRRTKGTLLDGQP 574
Query: 723 --QLPMKREHVIYCRLSKRQRNLYEDFIASSETQ------ATLASANFFGMISIIMQLRK 774
LP K ++ S +R+ Y + S +Q A + N+ ++ ++++LR+
Sbjct: 575 IINLPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQNYANILLMLLRLRQ 634
Query: 775 VCNHPDLFE 783
C+HP L +
Sbjct: 635 ACDHPQLVK 643
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18
| chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 131/273 (47%), Gaps = 33/273 (12%)
Query: 484 KFPFLLKYSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWG 543
K P ++ L +Q G+++++ + L LADEMGLGKT+ IA+ C + W
Sbjct: 163 KIPSHIEPKLLPFQREGIEFILQHGGRVL---LADEMGLGKTLQAIAVTT---CVQESW- 215
Query: 544 PHLIVVPTSVMLNWETEFLKW--CPAFKILTYF---GSAKERKHKRQGWLKPNSFHV--- 595
P LI+ P+S+ L+W T +W P I+ G + + + H+
Sbjct: 216 PVLIIAPSSLRLHWATMIHQWLHVPPSDIVVVLPQPGGSNKCGFTIVSSNTKGTIHLDGV 275
Query: 596 -CITTYRLVIQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRR--ILLTGTP 652
I +Y +V + K+ +K +I DE+H +KN +++R L K + ILL+GTP
Sbjct: 276 FNIVSYDVVTKLDKLLMALDFKVVIADESHFLKNGQAKRTSACLPVIKKAQYAILLSGTP 335
Query: 653 LQNDLMELWSLMHFLMPHVFQSHQEF-----KDWFSNPISGMXXXXXXXXXXXXDRLHNV 707
+ +EL+ + L P V+++ E+ K F G D LHN+
Sbjct: 336 ALSRPIELFKQLEALYPDVYRNIHEYGGRYCKGGFFGTYQG---------ASNHDELHNL 386
Query: 708 LRP-FLLRRLKRDVEKQLPMKREHVIYCRLSKR 739
++ ++RRLK+DV +LP KR ++ L+ +
Sbjct: 387 MKATVMIRRLKKDVLTELPSKRRQQVFLDLAAK 419
Score = 91.7 bits (226), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 2/138 (1%)
Query: 1043 LRKLKSEGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKY 1102
L + G + L+F ML+ L F+ +R+DGSTP RQ L+ F +
Sbjct: 477 LENVIEAGCKFLVFAHHQSMLEELHQFLKKKKVGCIRIDGSTPASSRQALVSDFQDKDEI 536
Query: 1103 FLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISEST 1162
+LS R+ GVGI L A TVIF + W P QA+DR HRIGQ V+I+ L++ T
Sbjct: 537 KAAVLSIRAAGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDT 596
Query: 1163 IEENILKKANQKRALDDL 1180
+++ I K LD+L
Sbjct: 597 VDDIIWDVVQSK--LDNL 612
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 73/123 (59%)
Query: 1052 RALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKYFLFILSTRS 1111
+ ++F K+LD ++ FI G ++R+DG+T P +RQ +Q F + + + I+ +
Sbjct: 556 KMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQFSSEVKIAIIGVEA 615
Query: 1112 GGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKA 1171
GGVG++ A V+F + P++ QA+DR HR GQT V++Y ++ T++E+ +
Sbjct: 616 GGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTMDESNWQNL 675
Query: 1172 NQK 1174
N+K
Sbjct: 676 NKK 678
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 25/275 (9%)
Query: 501 LDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETE 560
LD L + +ADEMGLGKT+ IA+ E I L+V P + W E
Sbjct: 209 LDGLRFGLRRGGRCFIADEMGLGKTLQAIAIAGCFISEGSI----LVVCPAVLRFTWAEE 264
Query: 561 FLKWCPAF---KILTYFGSAKERKHKRQGWLKPNSFHVCITTYRLVIQDAKVFKRKKWKY 617
+W P+ + FG H+ P V + +Y+++ ++W
Sbjct: 265 LERWLPSCLPSDVHLVFG------HQDNPAYLPRWPKVVVISYKMLQHLRTTMLEREWAL 318
Query: 618 LILDEAHLIKNWKSQ----RWQTLLNFNSKRR--ILLTGTPLQNDLMELWSLMHFLMPHV 671
LI+DE+H ++ K + +T+L+ K + ILL+GTP + +++ ++ L P +
Sbjct: 319 LIVDESHHLRCSKKKSDPPEIKTVLDVAEKVKHIILLSGTPSVSRPFDIFHQINMLWPGL 378
Query: 672 F-QSHQEFKDWFS--NPISGMXXXXXXXXXXXXDRLH-NVL--RPFLLRRLKRDVEKQLP 725
+ EF + + G+ L N+L + ++RRLK+ + QLP
Sbjct: 379 LGKDKYEFAKTYCEVGLVRGIQGKIFQDFSKGTRLLELNILLNQTVMIRRLKQHLLTQLP 438
Query: 726 MKREHVIYCRLSKRQRNLYEDFIASSETQATLASA 760
KR ++ L K L ++ ++ Q A A
Sbjct: 439 PKRRQIVTILLKKSDIALAMAIVSEAKKQKDGAIA 473
>AT1G61140.2 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22536293-22540610 REVERSE
LENGTH=1022
Length = 1022
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 117/305 (38%), Gaps = 78/305 (25%)
Query: 546 LIVVPTSVMLNWETEFLKWCPA---FKILTYFGSAKERKHKRQGWLKPNSFHVCITTYRL 602
L+V PTSVM W E K + +L Y GS++ + + V +TT+ +
Sbjct: 675 LVVCPTSVMRQWADELHKKVTSEANLSVLVYHGSSRTKDPHELA-----KYDVVVTTFSI 729
Query: 603 V-------------------IQDAKVF--------KRK---------------------- 613
V + D KRK
Sbjct: 730 VSMEVPKQPLVDDEDEEKDGVHDGGTAATGFCSNKKRKYPPDSKKKGSKKKKVEFLSGPL 789
Query: 614 ---KWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPH 670
W ++LDEA IKN+K+Q + +KRR L+GTP+QN + +L+S FL
Sbjct: 790 AKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKYD 849
Query: 671 VFQSHQEFKDWFSNPISGMXXXXXXXXXXXXDRLHNVLRPFLLRRLKRDVEK-----QLP 725
+ S+ F NPI+ +L +L+ +LRR K + LP
Sbjct: 850 PYSSYVLFCSTIKNPIT-------RNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISLP 902
Query: 726 MKREHVIYCRLSKRQRNLYEDFIASSETQ------ATLASANFFGMISIIMQLRKVCNHP 779
K + + +R+ Y A S TQ A N+ ++ ++++LR+ C+HP
Sbjct: 903 PKSIELRKVDFTVEERDFYSKLEAESRTQFREYAEAGTVKQNYVNILLMLLRLRQACDHP 962
Query: 780 DLFEG 784
L G
Sbjct: 963 LLVNG 967
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 117/245 (47%), Gaps = 29/245 (11%)
Query: 950 IVLSPVERFQRMTDVVESFMFAIPATRAPSPVCWCSKNETTVLLHPSFKQQCS------- 1002
+VL+P E +R+ + +E + R V + V +HPS +C
Sbjct: 1124 VVLNPPELQRRVLESIE-----VTHNRKTKNVFETEHKLSLVSVHPSLVSRCKISEKERL 1178
Query: 1003 DVLSPLLSPIRPAIVRRQLYFPDRRLIQFDCGKLQELAILLRKLKSEGHRALIFTQMTKM 1062
+ LL+ ++ + R L++F EL ++++ + L+F+Q
Sbjct: 1179 SIDEALLAQLKKVRLDPNQSVKTRFLMEF-----VELCEVIKE------KVLVFSQYIDP 1227
Query: 1063 LD-ILEAFINLY----GYTYMRLDGSTPPEERQTLMQRFN-TNPKYFLFILSTRSGGVGI 1116
L I++ ++ + G + + G ++RQTL+ FN K +F+ ST++ GI
Sbjct: 1228 LKLIMKHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVFLASTKACSEGI 1287
Query: 1117 NLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRA 1176
+LVGA VI D WNPA+++QA R +RIGQ R V+ Y L+++ T E K QK
Sbjct: 1288 SLVGASRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPEGPKYCKQAQKDR 1347
Query: 1177 LDDLV 1181
+ +LV
Sbjct: 1348 ISELV 1352
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 122/315 (38%), Gaps = 57/315 (18%)
Query: 515 ILADEMGLGKTIMTIALL-AHLACEKGIWGPHLIVVPTSVMLNWETEFLKW---CPAFKI 570
I++ G GKT +TI L A+L C +I+ P S++L W EF KW P +
Sbjct: 860 IMSHAPGTGKTRLTIIFLQAYLQCFPDC--KPVIIAPASLLLTWAEEFKKWNISIPFHNL 917
Query: 571 LTYFGSAKE---------------------RKHKRQGWLKPNSFHVCITTYRLV------ 603
+ + KE R K W+K S + +Y L
Sbjct: 918 SSLDFTGKENSAALGLLMQKNATARSNNEIRMVKIYSWIKSKS--ILGISYNLYEKLAGV 975
Query: 604 ------------------IQDAKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRR 645
+ D + + L+LDEAH +N +S W+TL +++R
Sbjct: 976 KDEDKKTKMVREVKPDKELDDIREILMGRPGLLVLDEAHTPRNQRSCIWKTLSKVETQKR 1035
Query: 646 ILLTGTPLQNDLMELWSLMHFLMPHVFQ--SHQEFKDWFSNPISGMXXXXXXXXXXXXDR 703
ILL+GTP QN+ +EL +++ P + + K + G +
Sbjct: 1036 ILLSGTPFQNNFLELCNVLGLARPKYLERLTSTLKKSGMTVTKRGKKNLGNEINNRGIEE 1095
Query: 704 LHNVLRPFLLRRLKRDVEKQLPMKREHVIYCRLSKRQRNLYE--DFIASSETQATLASAN 761
L V+ PF+ ++ LP RE V+ + QR + E + + +T+ + +
Sbjct: 1096 LKAVMLPFVHVHKGSILQSSLPGLRECVVVLNPPELQRRVLESIEVTHNRKTKNVFETEH 1155
Query: 762 FFGMISIIMQLRKVC 776
++S+ L C
Sbjct: 1156 KLSLVSVHPSLVSRC 1170
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 1042 LLRKLKSEGHRALIFTQMTKMLDILEAFINL-----YGYTYMRLDGSTPPEERQTLMQRF 1096
L+ S G + L+F+Q L LE L G L G+T E+R+ M+ F
Sbjct: 702 LINLCDSAGEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTGNTSSEQREWSMETF 761
Query: 1097 NTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYR 1156
N++P +F S ++ G GI+LVGA ++ D NP++ +QA R R GQ + VH YR
Sbjct: 762 NSSPDAKIFFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIGRAFRPGQKKMVHAYR 821
Query: 1157 LISESTIEE 1165
LI+ S+ EE
Sbjct: 822 LIAGSSPEE 830
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 20/175 (11%)
Query: 515 ILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYF 574
I+A G GKT M I+ + + P L+V+P ++ W+ EF++W L F
Sbjct: 374 IMAHAPGSGKTFMIISFMQSFLAKYPQAKP-LVVLPKGILPTWKKEFVRWQVEDIPLLDF 432
Query: 575 GSAKERKHKRQ-----GWLKPNSFH----------VCI-TTYRLVIQDAKVFKRKKWKYL 618
SAK +Q W++ S VC TT L Q+ + K L
Sbjct: 433 YSAKAENRAQQLSILKQWMEKKSILFLGYQQFSTIVCDDTTDSLSCQEILL---KVPSIL 489
Query: 619 ILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQ 673
ILDE H +N + Q+L + R+++L+GT QN + E++++++ + P +
Sbjct: 490 ILDEGHTPRNEDTNLLQSLAQVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLK 544
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 5/154 (3%)
Query: 1032 DCGKLQELAILLRKLKSEGHRALIFTQMTKMLDILEAFIN-----LYGYTYMRLDGSTPP 1086
D K++ LL +S G + L+F+Q + LE ++ G + G +
Sbjct: 618 DGVKMKFFLNLLALCESTGEKLLVFSQYIVPIKTLERLMSSMKGWRLGKEMFTITGDSSN 677
Query: 1087 EERQTLMQRFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRI 1146
E+R+ M+RFN + + +F S ++ G GI+LVGA V+ D NP++ QQA R +R
Sbjct: 678 EQREWSMERFNNSLEAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQAVARAYRP 737
Query: 1147 GQTREVHIYRLISESTIEENILKKANQKRALDDL 1180
GQ R+V+ Y+L++ + EE + +K + +
Sbjct: 738 GQKRKVYAYKLVAADSPEEENYETCTRKEMMSKM 771
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 515 ILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYF 574
ILA G GKT + I+ L P L+V+P ++ +W+ EF W L F
Sbjct: 289 ILAHAPGSGKTFLLISFLQSFMAMDPQARP-LVVLPKGIIESWKREFTLWEVEKIPLLDF 347
Query: 575 GSAKERKHKRQ-----GWLKPNSFH----------VCITTYRLVIQDAKVFKRKKWKYLI 619
S K K+Q W+K S +C + +D K+ +K LI
Sbjct: 348 YSVKAESRKQQLKVLGQWIKERSILFLGYQQFTRIICDDNFEAASEDCKLILLEKPTLLI 407
Query: 620 LDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQ 673
LDE H +N ++ +L ++R+++LTGT QN++ E+++++ + P +
Sbjct: 408 LDEGHTSRNKETYMLSSLARVKTRRKVVLTGTLFQNNVEEVFNILDLVRPKFLK 461
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Query: 989 TTVLLHPSFKQQCSDVLSPLLSPIRPAIVRRQLYFPDRRLIQFDCG-KLQELAILLRKLK 1047
+ V +HPS C+ L I PA L R ++++ G K + L +R
Sbjct: 886 SAVSVHPSLYLCCNPTKKEDLV-IGPAT----LGTLKRLRLKYEEGVKTKFLIDFIRISG 940
Query: 1048 SEGHRALIFTQMTKMLD-ILEAFINLYGYT----YMRLDGSTPPEERQTLMQRFNT-NPK 1101
+ + L+++Q L I+E I +T + + G +RQ ++ FN +
Sbjct: 941 TVKEKVLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPDSG 1000
Query: 1102 YFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISES 1161
+ + ST++ GI+LVGA V+ D WNP+++ QA R RIGQ R V IY L+ +
Sbjct: 1001 SKVLLASTKACSEGISLVGASRVVILDVVWNPSVESQAISRAFRIGQKRAVFIYHLMVKD 1060
Query: 1162 TIEENILKKANQKRALDDLVIQS 1184
T E N K ++K + +LV S
Sbjct: 1061 TSEWNKYCKQSEKHRISELVFSS 1083
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 1039 LAILLRKLKSEGHRALIFTQMTKMLDIL-EAFINLY----GYTYMRLDGSTPPEERQTLM 1093
L ++ R +K E + LIF + + E F N++ G + L G ER ++
Sbjct: 1069 LNLIFRVVKRE--KILIFCHNIAPIRMFTELFENIFRWQRGREILTLTGDLELFERGRVI 1126
Query: 1094 QRFN--TNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTRE 1151
+F NP L + S + GI+L A VI DS+WNP+ +QA R R GQ +
Sbjct: 1127 DKFEEPGNPSRVL-LASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKV 1185
Query: 1152 VHIYRLISESTIEENILKKANQKRALDDLVI 1182
V++Y+L+S T+EE+ ++ K + ++
Sbjct: 1186 VYVYQLLSRGTLEEDKYRRTTWKEWVSCMIF 1216
>AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases;ATP
binding;nucleic acid binding | chr2:17013535-17021315
REVERSE LENGTH=1664
Length = 1664
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 1052 RALIFTQMTKMLDILEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPK---------- 1101
+ L+F+ +LD+LE T +R+ G + QT + +F + K
Sbjct: 1451 KVLVFSSWNDVLDVLEHAFAANSITCIRMKGG---RKSQTAISKFKGSEKETQKTNSHQK 1507
Query: 1102 ----YFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRL 1157
+ +L + G G+NL+ A VI + NPA + QA R HRIGQ + ++R
Sbjct: 1508 EEKSIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTLVHRF 1567
Query: 1158 ISESTIEENILK 1169
+ T+EE+I K
Sbjct: 1568 LVSGTVEESIYK 1579
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 1039 LAILLRKLKSEGHRALIFTQ-MTKMLDILEAFINLY----GYTYMRLDGSTPPEERQTLM 1093
L ++ R +K E + LIF + + LE F N++ G + L G ER ++
Sbjct: 1063 LNLVFRVVKRE--KILIFCHNIAPIRLFLELFENVFRWKRGRELLTLTGDLELFERGRVI 1120
Query: 1094 QRFN-TNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREV 1152
+F + + + S + GI+L A VI DS+WNP+ +QA R R GQ + V
Sbjct: 1121 DKFEEPGGQSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVV 1180
Query: 1153 HIYRLISESTIEENILKKANQKRALDDLVI 1182
++Y+L+S T+EE+ ++ K + ++
Sbjct: 1181 YVYQLLSRGTLEEDKYRRTTWKEWVSSMIF 1210
>AT1G08060.2 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 1034 GKLQELAILLRKLKSEGHRALIFTQMTK------MLDILEAFINLYGYTYMRLDGSTPPE 1087
GKL L +L +K G +A++F Q T+ + +ILE F+ + +
Sbjct: 559 GKLHLLDKMLTHIKKNGLKAVVFYQATQTPEGLLLGNILEDFVGQR-FGPKSYEHGIYSS 617
Query: 1088 ERQTLMQRFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIG 1147
++ + + FN + + +L TR+ I L+ AD I + S NP+ D + ++
Sbjct: 618 KKNSAINNFNKESQCCVLLLETRACSQTIKLLRADAFILFGSSLNPSHDVKHVEKIKIES 677
Query: 1148 QTREVHIYRLISESTIEEN--ILKKAN--QKRALDDL 1180
+ I+RL S T+EE IL + N Q +A+++L
Sbjct: 678 CSERTKIFRLYSVCTVEEKALILARQNKRQNKAVENL 714
>AT1G08060.1 | Symbols: MOM, MOM1 | ATP-dependent helicase family
protein | chr1:2501981-2510488 REVERSE LENGTH=2001
Length = 2001
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 1034 GKLQELAILLRKLKSEGHRALIFTQMTK------MLDILEAFINLYGYTYMRLDGSTPPE 1087
GKL L +L +K G +A++F Q T+ + +ILE F+ + +
Sbjct: 559 GKLHLLDKMLTHIKKNGLKAVVFYQATQTPEGLLLGNILEDFVGQR-FGPKSYEHGIYSS 617
Query: 1088 ERQTLMQRFNTNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIG 1147
++ + + FN + + +L TR+ I L+ AD I + S NP+ D + ++
Sbjct: 618 KKNSAINNFNKESQCCVLLLETRACSQTIKLLRADAFILFGSSLNPSHDVKHVEKIKIES 677
Query: 1148 QTREVHIYRLISESTIEEN--ILKKAN--QKRALDDL 1180
+ I+RL S T+EE IL + N Q +A+++L
Sbjct: 678 CSERTKIFRLYSVCTVEEKALILARQNKRQNKAVENL 714