Miyakogusa Predicted Gene
- Lj5g3v0875710.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0875710.1 tr|Q8H2U6|Q8H2U6_ORYSJ Os07g0661700 protein
OS=Oryza sativa subsp. japonica GN=P0453E03.109 PE=4
SV=,52.81,0.00000000000001,coiled-coil,NULL,CUFF.54141.1
(113 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G57320.1 | Symbols: | unknown protein; Has 30 Blast hits to ... 82 6e-17
AT3G57320.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 46 6e-06
>AT3G57320.1 | Symbols: | unknown protein; Has 30 Blast hits to 30
proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). |
chr3:21210082-21210672 FORWARD LENGTH=102
Length = 102
Score = 82.4 bits (202), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 67/94 (71%), Gaps = 7/94 (7%)
Query: 14 LKPFYQRASEAEDRLSRLEAAFNSRK----DTGNEEESKVINDLQSKLKDANAELISEKE 69
LKPF+ RA+EA++RL++LEAA S K D EE+K LQSKL++ANA + E+
Sbjct: 11 LKPFFHRATEAQERLAKLEAALASTKTDIPDAKLVEENK---QLQSKLEEANATVKQEQT 67
Query: 70 KVQMLAAENEKLQNRIIHLVRALKDADLKLEQVS 103
KV+ L EN K + RI+HLVRALKDAD KLE++S
Sbjct: 68 KVKDLTIENAKHKYRILHLVRALKDADQKLERLS 101
>AT3G57320.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 17
Blast hits to 17 proteins in 7 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr3:21210082-21210571 FORWARD LENGTH=78
Length = 78
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 7/62 (11%)
Query: 14 LKPFYQRASEAEDRLSRLEAAFNSRK----DTGNEEESKVINDLQSKLKDANAELISEKE 69
LKPF+ RA+EA++RL++LEAA S K D EE+K LQSKL++ANA + E+
Sbjct: 11 LKPFFHRATEAQERLAKLEAALASTKTDIPDAKLVEENK---QLQSKLEEANATVKQEQT 67
Query: 70 KV 71
K
Sbjct: 68 KF 69