Miyakogusa Predicted Gene

Lj5g3v0868340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0868340.1 Non Chatacterized Hit- tr|I1JGE1|I1JGE1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,80.31,0,SAP,DNA-binding SAP;
AP_NUCLEASE_F1_4,Exodeoxyribonuclease III xth; Putative DNA-binding
(bihelical),CUFF.54085.1
         (544 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G41460.1 | Symbols: ARP | apurinic endonuclease-redox protein...   582   e-166
AT2G41460.2 | Symbols: ARP | apurinic endonuclease-redox protein...   333   3e-91
AT3G60950.1 | Symbols:  | C2 calcium/lipid-binding endonuclease/...   126   4e-29
AT3G48425.1 | Symbols:  | DNAse I-like superfamily protein | chr...   108   1e-23
AT4G36050.2 | Symbols:  | endonuclease/exonuclease/phosphatase f...    81   2e-15
AT3G61030.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB ...    76   6e-14

>AT2G41460.1 | Symbols: ARP | apurinic endonuclease-redox protein |
           chr2:17285731-17288769 FORWARD LENGTH=536
          Length = 536

 Score =  582 bits (1501), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 282/458 (61%), Positives = 345/458 (75%), Gaps = 9/458 (1%)

Query: 89  EIERLRNDPSIVDTMTVQELRKTLKSIRVPAKGRKEDLLSTLKSFMDNNMGEQHPQIEEE 148
           E+  L++D   ++ MTVQELR TL+ + VP KGRK++L+STL+  MD+N+ +Q       
Sbjct: 86  EMGTLQDDRKEIEAMTVQELRSTLRKLGVPVKGRKQELISTLRLHMDSNLPDQKETSS-- 143

Query: 149 HGLLISSENTSVEVKTKKVD-EDHVDDINDNPEVFEHSRGKRRLKQSGXXXXXXXXXXXX 207
                S+ + SV +K K  + E+  +D   N E ++   G++R+KQS             
Sbjct: 144 -----STRSDSVTIKRKISNREEPTEDECTNSEAYDIEHGEKRVKQSTEKNLKAKVSAKA 198

Query: 208 XXXXXXDEVSDFKPS-RAKXXXXXXXXXXXXXXDEISTTTIPTEPWTVLAHKKPQKDWIA 266
                   +   K   ++K              +EI ++   +EPWTVLAHKKPQKDW A
Sbjct: 199 IAKEQKSLMRTGKQQIQSKEETSSTISSELLKTEEIISSPSQSEPWTVLAHKKPQKDWKA 258

Query: 267 YNPKTMRPQPLTRDTKFVKLLSWNVNGLRALLKLEGFSALELAQREDFDVLCLQETKLQE 326
           YNPKTMRP PL   TK VK+++WNVNGLR LLK E FSAL+LAQRE+FD+LCLQETKLQ 
Sbjct: 259 YNPKTMRPPPLPEGTKCVKVMTWNVNGLRGLLKFESFSALQLAQRENFDILCLQETKLQV 318

Query: 327 KDINEIKRQLIDGYENSFWTCSVSKLGYSGTAIISRIKPLSVRYGLGISDHDTEGRLVTA 386
           KD+ EIK+ LIDGY++SFW+CSVSKLGYSGTAIISRIKPLSVRYG G+S HDTEGR+VTA
Sbjct: 319 KDVEEIKKTLIDGYDHSFWSCSVSKLGYSGTAIISRIKPLSVRYGTGLSGHDTEGRIVTA 378

Query: 387 EFDTFYLICGYIPNSGDGLKRLSYRVTQWDPSLSNYLKELEKTKPVVLTGDLNCAHEEID 446
           EFD+FYLI  Y+PNSGDGLKRLSYR+ +WD +LSN++KELEK+KPVVLTGDLNCAHEEID
Sbjct: 379 EFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLSNHIKELEKSKPVVLTGDLNCAHEEID 438

Query: 447 IYNPAGNKKSAGFTDEERKSFAANFLSRGFVDTFRRQHPDVVGYTYWGYRHGGRKTNRGW 506
           I+NPAGNK+SAGFT EER+SF AN L +GFVDTFR+QHP VVGYTYWGYRHGGRKTN+GW
Sbjct: 439 IFNPAGNKRSAGFTIEERQSFGANLLDKGFVDTFRKQHPGVVGYTYWGYRHGGRKTNKGW 498

Query: 507 RLDYFLVSESIADKVHDSYILPDVMGSDHCPVGLIIKL 544
           RLDYFLVS+SIA  VHDSYILPD+ GSDHCP+GLI+KL
Sbjct: 499 RLDYFLVSQSIAANVHDSYILPDINGSDHCPIGLILKL 536


>AT2G41460.2 | Symbols: ARP | apurinic endonuclease-redox protein |
           chr2:17285731-17288041 FORWARD LENGTH=403
          Length = 403

 Score =  333 bits (853), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 172/322 (53%), Positives = 219/322 (68%), Gaps = 9/322 (2%)

Query: 89  EIERLRNDPSIVDTMTVQELRKTLKSIRVPAKGRKEDLLSTLKSFMDNNMGEQHPQIEEE 148
           E+  L++D   ++ MTVQELR TL+ + VP KGRK++L+STL+  MD+N+ +Q       
Sbjct: 86  EMGTLQDDRKEIEAMTVQELRSTLRKLGVPVKGRKQELISTLRLHMDSNLPDQKETSS-- 143

Query: 149 HGLLISSENTSVEVKTKKVD-EDHVDDINDNPEVFEHSRGKRRLKQSGXXXXXXXXXXXX 207
                S+ + SV +K K  + E+  +D   N E ++   G++R+KQS             
Sbjct: 144 -----STRSDSVTIKRKISNREEPTEDECTNSEAYDIEHGEKRVKQSTEKNLKAKVSAKA 198

Query: 208 XXXXXXDEVSDFKPS-RAKXXXXXXXXXXXXXXDEISTTTIPTEPWTVLAHKKPQKDWIA 266
                   +   K   ++K              +EI ++   +EPWTVLAHKKPQKDW A
Sbjct: 199 IAKEQKSLMRTGKQQIQSKEETSSTISSELLKTEEIISSPSQSEPWTVLAHKKPQKDWKA 258

Query: 267 YNPKTMRPQPLTRDTKFVKLLSWNVNGLRALLKLEGFSALELAQREDFDVLCLQETKLQE 326
           YNPKTMRP PL   TK VK+++WNVNGLR LLK E FSAL+LAQRE+FD+LCLQETKLQ 
Sbjct: 259 YNPKTMRPPPLPEGTKCVKVMTWNVNGLRGLLKFESFSALQLAQRENFDILCLQETKLQV 318

Query: 327 KDINEIKRQLIDGYENSFWTCSVSKLGYSGTAIISRIKPLSVRYGLGISDHDTEGRLVTA 386
           KD+ EIK+ LIDGY++SFW+CSVSKLGYSGTAIISRIKPLSVRYG G+S HDTEGR+VTA
Sbjct: 319 KDVEEIKKTLIDGYDHSFWSCSVSKLGYSGTAIISRIKPLSVRYGTGLSGHDTEGRIVTA 378

Query: 387 EFDTFYLICGYIPNSGDGLKRL 408
           EFD+FYLI  Y+PNSGDGLKRL
Sbjct: 379 EFDSFYLINTYVPNSGDGLKRL 400


>AT3G60950.1 | Symbols:  | C2 calcium/lipid-binding
           endonuclease/exonuclease/phosphatase |
           chr3:22524475-22529770 FORWARD LENGTH=627
          Length = 627

 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/95 (68%), Positives = 76/95 (80%), Gaps = 6/95 (6%)

Query: 363 IKPLSVRYGLGIS--DHDTEGRLVTAEFDTFYLICGYIPNSGDGLKRLSYR----VTQWD 416
           IKPL VRYG G+S  DHD EGR+VTAEFD+FYLI  Y+PNS DGLK L       +  WD
Sbjct: 502 IKPLRVRYGTGLSGSDHDMEGRMVTAEFDSFYLISTYVPNSVDGLKGLVLLKLNAIEDWD 561

Query: 417 PSLSNYLKELEKTKPVVLTGDLNCAHEEIDIYNPA 451
            +LSN++K+LEK+KPVVLTGDLNCAHEEIDI+NPA
Sbjct: 562 RTLSNHIKDLEKSKPVVLTGDLNCAHEEIDIFNPA 596


>AT3G48425.1 | Symbols:  | DNAse I-like superfamily protein |
           chr3:17931910-17934493 FORWARD LENGTH=364
          Length = 364

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 146/309 (47%), Gaps = 57/309 (18%)

Query: 285 KLLSWNVNGLRALLKLEGFSALELAQREDFDVLCLQETKL-------QEKDINEI----- 332
           K ++WN N     +K +     +     D DV+ +QE ++       + K+  E+     
Sbjct: 44  KFMTWNANSFLLRVKNDWSQFSKFVSDFDPDVIAIQEVRMPAAGGKGKPKNHEELSDDTK 103

Query: 333 ----KRQLID--------GYENSFWTCSVSKLGYSGTAIISR--IKPLSVRYGLG--ISD 376
               ++Q++         G    +W+ + SK  Y+GTA++ +   KP  V + L    S 
Sbjct: 104 VLREEKQILTRALSSPPFGNYGVWWSLADSK--YAGTALLVKKCFKPRKVYFNLDKLASK 161

Query: 377 HDTEGRLVTAEFDTFYLICGYIPNSGDGLKRLSY-RVTQWDPSLSNYLKELEKTKPVVLT 435
           H+ +GR++ AEF+TF L+  Y PN+G   +  ++ R  +WD  +  +L +    KP++  
Sbjct: 162 HEPDGRVILAEFETFRLLNTYSPNNGWKDEENAFQRRRKWDKRIVEFLNKTS-DKPLIWC 220

Query: 436 GDLNCAHEEIDIYNP------------AGNKKSA---GFTDEERKSFAANFLSRGFVDTF 480
           GDLN +HEEID+ +P              NK+     GFT  ER  F A       VD +
Sbjct: 221 GDLNVSHEEIDVSHPEFFATAKLNGYVPPNKEDCGQPGFTPSERGRFGATIKEGRLVDAY 280

Query: 481 RRQHPDV---VGYTYWGYRHGGRKTNRGWRLDYFLVSESIAD-----KVHDSYI-LPDVM 531
           R  H +     G+++ G   G  +  R  R+DYFLVSE + D     K+H   I L    
Sbjct: 281 RYLHKEQEMESGFSWSGNPIGKYRGKR-MRIDYFLVSEQLKDRIVSCKMHGRGIELEGFH 339

Query: 532 GSDHCPVGL 540
           GSDHCPV L
Sbjct: 340 GSDHCPVTL 348


>AT4G36050.2 | Symbols:  | endonuclease/exonuclease/phosphatase
           family protein | chr4:17052323-17055044 REVERSE
           LENGTH=610
          Length = 610

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 133/302 (44%), Gaps = 59/302 (19%)

Query: 284 VKLLSWNVNGLRALLKLEGF-SALELAQREDFDVLCLQETKLQEKDINEIKRQLIDGYEN 342
           +K++++NVNGLR   ++  F S L+L    D D++C QETKL+ +++      + DGYE 
Sbjct: 1   MKIVTYNVNGLRQ--RVSQFDSLLKLLDSFDADIICFQETKLRRQELT-ADLAIADGYE- 56

Query: 343 SFWTCSVS----KLGYSGTAIISRIK----------PLSVRYGL----------GISDH- 377
           SF++C+ +    + GYSG A   R+K          P++   G+          G S+  
Sbjct: 57  SFFSCTRTSEKGRTGYSGVATFCRVKSASSSCETALPVTAEEGITGLVNSNSRGGKSETS 116

Query: 378 -----------------DTEGRLVTAEFDTFYLICGYIPNS-GDGLKRLSYRVTQWDPSL 419
                            D EGR V  +   F +   Y P +  D   R+ ++   +    
Sbjct: 117 TVAEGLEEYEKEELLMIDQEGRCVITDHGHFVVFNVYGPRAVADDADRIEFKHRFYGVLE 176

Query: 420 SNYLKELEKTKPVVLTGDLNCAHEEIDIYNPAGNKKSAGFTDEERKSFAANFLSRG--FV 477
             +   L + + V + GDLN A   +D      + +     +E RK F +  + RG  F 
Sbjct: 177 RRWECLLRQGRRVFVVGDLNIAPFAMDRCEAGPDFEK----NEFRKWFRSLLVERGGSFS 232

Query: 478 DTFRRQHPDVV-GYTYWGYRHGGRKTNRGWRLDYFLVSESI----ADKVHDSYILPDVMG 532
           D FR +HP+    +T W    G  + N G R+D+ LV+ S      DK   S++   V  
Sbjct: 233 DVFRSKHPERKDAFTCWSSSSGAEQFNYGSRIDHILVAGSCLHQDEDKQGHSFLACHVKE 292

Query: 533 SD 534
            D
Sbjct: 293 CD 294


>AT3G61030.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB
           domain) family protein | chr3:22585655-22590452 FORWARD
           LENGTH=509
          Length = 509

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 87/166 (52%), Gaps = 20/166 (12%)

Query: 266 AYNPKTMRPQPLTRDTKFVKLLSWNVNGLRAL-LKLEGFSALELAQREDFDVLCLQETKL 324
           A +P+  + Q        VK + +++N  +   LK+ G +    + R++ + + +QE K 
Sbjct: 356 AISPRNKKFQQGLMSNATVKSVPFSINNSKGKELKIVGAAMGSDSDRDEIEAMTVQELK- 414

Query: 325 QEKDINEIKRQLIDGYENSFWTCSVSKLGYSGTAIISRIKPLSVRYGLGIS--DHDTEGR 382
                + I+  L   Y   F  C V         I   IKPL VRYG G+S  DHD EGR
Sbjct: 415 -----SHIEASL---YSFRFSCCFV----IVSVDIQILIKPLRVRYGTGLSGSDHDMEGR 462

Query: 383 LVTAEFDTFYLICGYIPNSGDGLKRLSYR----VTQWDPSLSNYLK 424
           +VTAEFD+FYLI  Y+PNS DGLK L       +  WD +LSN++K
Sbjct: 463 MVTAEFDSFYLISTYVPNSVDGLKGLVLLKLNAIEDWDRTLSNHIK 508