Miyakogusa Predicted Gene

Lj5g3v0845560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0845560.1 Non Chatacterized Hit- tr|G7KD20|G7KD20_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,77.59,2e-16,seg,NULL; Apc5,Anaphase-promoting complex
subunit 5,TPR-containing domain; SUBFAMILY NOT
NAMED,NULL;,gene.g60182.t1.1
         (651 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G06590.1 | Symbols:  | unknown protein; Has 380 Blast hits to...   554   e-158

>AT1G06590.1 | Symbols:  | unknown protein; Has 380 Blast hits to
           268 proteins in 109 species: Archae - 0; Bacteria - 0;
           Metazoa - 245; Fungi - 73; Plants - 49; Viruses - 0;
           Other Eukaryotes - 13 (source: NCBI BLink). |
           chr1:2016504-2024505 REVERSE LENGTH=916
          Length = 916

 Score =  554 bits (1427), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 284/433 (65%), Positives = 335/433 (77%), Gaps = 24/433 (5%)

Query: 233 KFEVKKHVQRPLLSFGPKTSMKLSTCPVNVSKELRLSSHLISDFTSESSPMTIDGAFSTA 292
           KFE+  HVQRPLLSFGPK SM+  TCPV+V KE+RL +HLISDF+SESS MTIDG+ S+A
Sbjct: 479 KFELM-HVQRPLLSFGPKASMRHKTCPVSVCKEIRLGAHLISDFSSESSTMTIDGSLSSA 537

Query: 293 WLRNLQKPVGSPVLCQENGSGNNSNVSQFCAQPTSIPGSVLQVLGSSCILRATAWELYGS 352
           WL++LQKP G PV+  ++GS  +S   Q C    SIPGSV Q++G+S +LRAT+WELYGS
Sbjct: 538 WLKDLQKPWGPPVISPDSGSRKSSTFFQLCDHLVSIPGSVSQLIGASYLLRATSWELYGS 597

Query: 353 --------------------SADAALAYVKLIQHLAVFKGYKEAFSALKIAEEKFXXXXX 392
                               S+DA LAY+KLIQHLA++KGYK+AF+ALK+AEEKF     
Sbjct: 598 APMARMNTLVYATLFGDSSSSSDAELAYLKLIQHLALYKGYKDAFAALKVAEEKFLTVSK 657

Query: 393 XXXXXXXXXXXHEHALHRGRLKLAQKLCDELSVLASPVTGVDMVLKTEASLRHARTLLAA 452
                      HE ALH G LKLAQ++C+EL  LAS   GVDM LK EASLR ARTLLAA
Sbjct: 658 SKVLLLKLQLLHERALHCGNLKLAQRICNELGGLASTAMGVDMELKVEASLREARTLLAA 717

Query: 453 KQFREAAAVAHSLFCMCYKYNLQVENASVLLLLAEIHKKSGNAVLGLPYALASLSFCTSF 512
           KQ+ +AA VAHSLFC C+K+NLQ+E ASVLLLLAEIHKKSGNAVLGLPYALAS+SFC SF
Sbjct: 718 KQYSQAANVAHSLFCTCHKFNLQIEKASVLLLLAEIHKKSGNAVLGLPYALASISFCQSF 777

Query: 513 NLDLLKASATLTLAELWLSLGSNHATRALNLVHGAFPMILGHGGLELRSRAYIVEAKCYL 572
           NLDLLKASATLTLAELWL LGSNH  RAL+L+HGAFPMILGHGGLELR+RAYI EA CYL
Sbjct: 778 NLDLLKASATLTLAELWLGLGSNHTKRALDLLHGAFPMILGHGGLELRARAYIFEANCYL 837

Query: 573 ---CNTNFNNYNIVIDPLRQASEELQLLEFHELAAEAFYLMAMVYDKLGQYEEREEAAAS 629
               ++   + + V+D LRQAS+ELQ LE+HELAAEA YLMAMVYDKLG+ +EREEAA+ 
Sbjct: 838 SDPSSSVSTDSDTVLDSLRQASDELQALEYHELAAEASYLMAMVYDKLGRLDEREEAASL 897

Query: 630 FQKHTLALDNPQD 642
           F+KH +AL+NPQD
Sbjct: 898 FKKHIIALENPQD 910



 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 60/86 (69%), Gaps = 6/86 (6%)

Query: 1   MFLRRCILAFNLLSFEGICYLLTSIGMYCKD-FSNCSPYEEPSLDDSSSNIETHPEYENT 59
           MF+RRCILAFNLLSFEG+C+L +SI  YCK+  S+ + +  P     ++N+E+  +Y+  
Sbjct: 136 MFVRRCILAFNLLSFEGVCHLFSSIEDYCKEAHSSFAQFGAP-----NNNLESLIQYDQM 190

Query: 60  DLENFVYEKVSEEIDARKEASERVLF 85
           D+EN+  +K +EEI+ +K AS  V F
Sbjct: 191 DMENYAMDKPTEEIEFQKTASGIVPF 216