Miyakogusa Predicted Gene
- Lj5g3v0844490.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0844490.1 tr|C1EEU2|C1EEU2_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MICPUN_106293,25.07,3e-18,seg,NULL; NT-C2,EEIG1/EHBP1 N-terminal
domain; coiled-coil,NULL; FAMILY NOT NAMED,NULL,gene.g60181.t1.1
(795 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G11760.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 453 e-127
AT5G04860.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 393 e-109
AT2G10560.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 240 3e-63
AT2G25460.1 | Symbols: | CONTAINS InterPro DOMAIN/s: C2 calcium... 136 5e-32
>AT3G11760.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr3:3718529-3721123 FORWARD
LENGTH=702
Length = 702
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/360 (62%), Positives = 266/360 (73%), Gaps = 51/360 (14%)
Query: 414 RGVSLDIIYP--GEKTEDDSCAN-RTSISEFGDDNFAVGSWEQKEVMSRDGHMKLQAQVF 470
R +S D +P G K ++DS AN RTS SEFG+D+FA+GSWE+KEV+SRDGHMKLQ VF
Sbjct: 377 RQLSSDEAHPPFGSKIDEDSSANPRTSFSEFGEDSFAIGSWEEKEVISRDGHMKLQTSVF 436
Query: 471 FASIDQRSERAAGESACTALVAVIADWFQNNHDLMPIKSQFDSLIREGSLEWRNLCENQT 530
ASIDQRSERAAGESACTALVAVIADWFQ N +LMPIKSQFDSLIREGSLEWRNLCEN+T
Sbjct: 437 LASIDQRSERAAGESACTALVAVIADWFQKNGNLMPIKSQFDSLIREGSLEWRNLCENET 496
Query: 531 YMERFPDKHFDLETVIQAKTRPLSVVPGKSFIGFFHPEGM-DEGRFDFLHGAMSFDNIWD 589
YM++FPDKHFDL+TV+QAK RPL+V+PGKSF+GFFHP+GM +EGRF+FL GAMSFD+IW
Sbjct: 497 YMQKFPDKHFDLDTVLQAKIRPLTVIPGKSFVGFFHPDGMINEGRFEFLQGAMSFDSIWA 556
Query: 590 EI-----SHNAGHDCTYNGEPQVYIISWNDHFFILKVEVDAYYIIDTLGERLYEGCNQAY 644
EI S G + P VYI+SWNDHFF+LKVE +AYYIIDTLGERLYEGC+QAY
Sbjct: 557 EIISLEESSANGDSYDDDSPPHVYIVSWNDHFFVLKVEKEAYYIIDTLGERLYEGCDQAY 616
Query: 645 ILKFDSNTLIHKMPEVAQSSDEKTITDQQQTVADVLENNDKQIQQVNAKEADSVAAXXXX 704
+LKFD T+IHK+ ++ E E +S
Sbjct: 617 VLKFDHKTVIHKILHTEEAGSE--------------------------SEPES------- 643
Query: 705 XXXXXXXXXXVVCRGKDACKEYIKSFLAAIPIRELQADVKKGLVSSTPLHHRLQIEFHYT 764
++ RGK++CKEYIK+FLAAIPIRELQ D+KKGL S+ P+HHRLQIEFHYT
Sbjct: 644 ---------EILSRGKESCKEYIKNFLAAIPIRELQEDIKKGLASTAPVHHRLQIEFHYT 694
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 190/406 (46%), Positives = 226/406 (55%), Gaps = 69/406 (16%)
Query: 1 MKKWRPWPPLVSRKYEVKLLVRTLQGCDLLREGAREG-MFAVEIRWKGPKLALSSLRRSA 59
M KWRPWPPLV+RKYEVKL V+ L+G DL+REG E VEIRWKGPK L SLRRS
Sbjct: 5 MMKWRPWPPLVTRKYEVKLSVKKLEGWDLVREGVPEKDRLTVEIRWKGPKATLGSLRRS- 63
Query: 60 VARNFTKEAAAGCDGDNNNDVVLW-DEEFQSFCTLSAYKDNNNAFHPWEIAFTVF-NGL- 116
V RNFTKEA +DVV W DEEFQS C+L++YKD + F+PWEI F+VF NG+
Sbjct: 64 VKRNFTKEAVG------ESDVVSWEDEEFQSLCSLTSYKD--SLFYPWEITFSVFTNGMK 115
Query: 117 -NQRPKVPVIGTASLNLAEFASVIDQKDFDLNIPLTIPGGSAXXXXXXXXXXXXXXXLRA 175
Q+ K PV+GTA LNLAE+A V D+K+FD+NIPLT+ A LR
Sbjct: 116 QGQKNKAPVVGTAFLNLAEYACVTDKKEFDINIPLTLSACVASETHPLLFVSLSLLELRT 175
Query: 176 AQESSELVQKSV----VPVASPLAQTGETNLAEKDEVSTIKAGLRKVKILTEFVXXXXXX 231
E+S+ ++ + Q ET+ EK++VS IKAGLRKVKI TEFV
Sbjct: 176 TPETSDSAAQTAVVPLPLPSPSPQQPTETHSVEKEDVSAIKAGLRKVKIFTEFVSTRKAK 235
Query: 232 XXXXXXXXXXXNLSARSEDGEYNYPFDSDSLDDFEEGESDEGKE---------------- 275
+ R E+G ++ S+SLDDFE + DEGKE
Sbjct: 236 K------------ACREEEGRFSSFESSESLDDFET-DFDEGKEELMSMRKSFSYGPLSY 282
Query: 276 ---------------------FYYSNHISDTGXXXXXXXXXXXXXXXXXXXQSSKRSILP 314
YYS+ SD G +RSILP
Sbjct: 283 ANGVGTSLNCGAKVSDEDEDWVYYSHRKSDVGAGCSDAEDSAAGLVYEASLL-PRRSILP 341
Query: 315 WRKRKLSFRSPKSKGEPLLKKAYGEEGGDDIDFDRRQLSSDESLSP 360
WRKRKLSFRSPKSKGEPLLKK GEEGGDDIDFDRRQLSSDE+ P
Sbjct: 342 WRKRKLSFRSPKSKGEPLLKKDNGEEGGDDIDFDRRQLSSDEAHPP 387
>AT5G04860.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G11760.1); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
- 339 (source: NCBI BLink). | chr5:1411760-1414459
REVERSE LENGTH=782
Length = 782
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/367 (54%), Positives = 253/367 (68%), Gaps = 38/367 (10%)
Query: 438 ISEFGDDNFAVGSWEQKEVMSRDGHMKLQAQVFFASIDQRSERAAGESACTALVAVIADW 497
+S+FGDD+F VGSWE KE++SRDG MKL A+VF ASIDQRSERAAGESACTALVAV+A W
Sbjct: 418 LSQFGDDDFVVGSWETKEIISRDGLMKLTARVFLASIDQRSERAAGESACTALVAVMAHW 477
Query: 498 FQNNHDLMPIKSQFDSLIREGSLEWRNLCENQTYMERFPDKHFDLETVIQAKTRPLSVVP 557
+N D++P +S+FDSLIREGS EWRN+CEN+ Y ERFPDKHFDLETV+QAK RP+ VVP
Sbjct: 478 LGSNRDIIPTRSEFDSLIREGSSEWRNMCENEEYRERFPDKHFDLETVLQAKVRPICVVP 537
Query: 558 GKSFIGFFHP------EGMDEGRFDFLHGAMSFDNIWDEISHNAGHDCTYNGEPQVYIIS 611
+SFIGFFHP EG ++ DFL G MSFD+IW+E+ + EP +YI+S
Sbjct: 538 ERSFIGFFHPEKSEEEEGKEDASLDFLKGVMSFDSIWEELMKQEPEESA--SEPVIYIVS 595
Query: 612 WNDHFFILKVEVDAYYIIDTLGERLYEGCNQAYILKFDSNTLIHKMPEVAQSSDEKTITD 671
WNDHFF+L V DAYYIIDTLGERLYEGCNQAY+LKFD + I ++P V I D
Sbjct: 596 WNDHFFVLLVNHDAYYIIDTLGERLYEGCNQAYVLKFDKDAEIKRLPSV--------IKD 647
Query: 672 QQQTVADVLENNDKQIQQVNAKEADSVAAXXXXXXXXXXXXXXVVCRGKDACKEYIKSFL 731
+ + + + + +Q + VVCRGK++C+EYIKSFL
Sbjct: 648 NKADMGNQKQGGKNKSEQPERSKESEEQE-----------EEEVVCRGKESCREYIKSFL 696
Query: 732 AAIPIRELQADVKKGLVSSTPLHHRLQIEFHYTQLLQSYDI---------VPVAEASMTV 782
AAIPI++++AD+KKGLVSS LHHRLQIE HYT+ L + V V+EA+++V
Sbjct: 697 AAIPIQQVKADMKKGLVSS--LHHRLQIELHYTKHLHHHQPNMFESSATEVTVSEAAVSV 754
Query: 783 PETLALA 789
+LA
Sbjct: 755 TVAWSLA 761
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 198/422 (46%), Gaps = 83/422 (19%)
Query: 3 KWRPWPPLVSRKYEVKLLVRTLQGC--------DLLREGAREGMFA------VEIRWKGP 48
+W PWPPL + K++V ++V + G D + R G VEI+WKGP
Sbjct: 10 RWPPWPPLFAVKFDVIVVVHQMDGLLDSDGGGDDSTDQSQRGGGTTTRKRPVVEIKWKGP 69
Query: 49 KLALSSLRRSAVARNFTKEAAAGCDGDNNNDVVLWDEEFQSFCTLSAYKDNNNAFHPWEI 108
K +L+RS V RN T+E DG VV W+EEF+ C S YK+ +F PW +
Sbjct: 70 KSV--TLKRS-VVRNLTEEGGFRGDG-----VVEWNEEFKRVCEFSVYKE--GSFLPWFV 119
Query: 109 AFTVFNGLNQ--RPKVPVIGTASLNLAEFASVIDQKDFDLNIPLTIPGGSAXXXXXXXXX 166
+ TVF+GLNQ + KV G ASLN+AE+ S++ + D + +PL S+
Sbjct: 120 SLTVFSGLNQGSKEKVRSFGKASLNIAEYFSLMKEDDVQVKVPLKDCDSSSVRSPHVHIS 179
Query: 167 XXXXXXLRAAQESSELVQKSVVPVA-SPLAQTGETNLAEKDEVSTIKAGLRKVKILTEFV 225
+ +ES Q+S +PV SPL+ AEK E S +K GLRK+K +
Sbjct: 180 LQF-----SPKESLPERQRSALPVLWSPLSAE-----AEKAE-SVVKVGLRKMKTFNNCM 228
Query: 226 XXXXXXXXXXXXXXXXXNLSA-----RSEDGEYNYPFDSDSLDD---------------- 264
+ S R+ D + +YPFD+DSLD+
Sbjct: 229 SSTQASEKESEKDGSSGSGSDGKSPERNLDSDSSYPFDTDSLDEGDAADESEENKENESS 288
Query: 265 -------------------FEEGESDEGKEFYYSNH---ISDTGXXXXXXXXXXXXXXXX 302
F + E ++ Y +H +++TG
Sbjct: 289 LADPVNYKTLRSANWARGSFHTVTNPEDEDLIYYSHRSPLAETG-HCSDEVSNDVVSLEQ 347
Query: 303 XXXQSSKRSILPWRKRKLSFRSPKSKGEPLLKKAYGEEGGDDIDFDRRQL-SSDESLSPG 361
Q SK+ +L W+KRKLSFRSPK KGEPLLKK EEGGDDIDFDRRQL SSDES S
Sbjct: 348 AKGQMSKKRMLSWKKRKLSFRSPKQKGEPLLKKDCLEEGGDDIDFDRRQLSSSDESNSDW 407
Query: 362 VR 363
R
Sbjct: 408 YR 409
>AT2G10560.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G04860.1); Has 70 Blast hits to 70 proteins in
12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr2:4109862-4110698 REVERSE
LENGTH=278
Length = 278
Score = 240 bits (613), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 175/280 (62%), Gaps = 40/280 (14%)
Query: 525 LCENQTYMERFPDKHFDLETVIQAKTRPLSVVPGKSFIGFFH------PEGMDEGRFDFL 578
+CEN+ Y ERFPDKHFDLETV+QAK RP+ VVP ++FIGFFH E ++ DFL
Sbjct: 1 MCENEEYRERFPDKHFDLETVLQAKVRPICVVPERTFIGFFHREKSKEEEEKEDVSLDFL 60
Query: 579 HGAMSFDNIWDEISHNAGHDCTYNGEPQVYIISWNDHFFILKVEVDAYYIIDTLGERLYE 638
G MSFD+IW+EI + E +YI+SWNDH+F+L V DAYYIIDTLGER+YE
Sbjct: 61 KGVMSFDSIWEEIMKQEPEESA--SEHVIYIVSWNDHYFVLLVNHDAYYIIDTLGERVYE 118
Query: 639 GCNQAYILKFDSNTLIHKMPEVAQSSDEKTITDQQQTVADVLENNDKQIQQVNAKEADSV 698
GCNQAY+LKFD + I ++P V + + + +Q +K Q +KE++
Sbjct: 119 GCNQAYVLKFDQDAEIKRLPSVIKDNKADMGSQKQG-------GKNKYEQPERSKESEEQ 171
Query: 699 AAXXXXXXXXXXXXXXVVCRGKDACKEYIKSFLAAIPIRELQADVKKGLVSSTPLHHRLQ 758
VVCRGK++C+EYIKSFLAAIPI++++AD+K+GLVSS HHRLQ
Sbjct: 172 G------------EEVVVCRGKESCREYIKSFLAAIPIQQVKADMKEGLVSS--FHHRLQ 217
Query: 759 IEFHYTQLLQ---------SYDIVPVAEA--SMTVPETLA 787
IE +YT+ L S V V+EA SMTV LA
Sbjct: 218 IELYYTKHLHHRQPNMFESSTTKVTVSEATVSMTVAWLLA 257
>AT2G25460.1 | Symbols: | CONTAINS InterPro DOMAIN/s: C2
calcium-dependent membrane targeting
(InterPro:IPR000008); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G04860.1); Has 108
Blast hits to 69 proteins in 11 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr2:10833175-10835374 REVERSE LENGTH=423
Length = 423
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 114/189 (60%), Gaps = 11/189 (5%)
Query: 410 WLALRGVSLDIIYPGEKTEDDSCANRTSISE-----FGDDNFAVGSWEQKEVMSRDGHMK 464
W R +S + + E ED+ T SE + W K+++SRDG K
Sbjct: 236 WWKRRRLSFSMTWRREPREDEVTKTSTKPSEELEKPATEIPIEANKWVMKDLVSRDGKSK 295
Query: 465 LQAQVFFASIDQRSERAAGESACTALVAVIADWFQNNHDLM-PIKSQFDSLIREGSLEWR 523
L+++V+ ASIDQRSE+AAGE+AC A+ V+A WF N L+ P + FDSLI +GS W+
Sbjct: 296 LKSEVYLASIDQRSEQAAGEAACAAVAVVVAHWFHANPKLINPSGTAFDSLITQGSSLWQ 355
Query: 524 NLCENQTYMERFPDKHFDLETVIQAKTRPLSVVPGKSFIGFFHPEGMDEGRFDFLHGAMS 583
+LC+ ++Y+ FP++HFDLET++ A RP+ V KSF G F PE RF L G MS
Sbjct: 356 SLCDKESYLRLFPNRHFDLETIVSANLRPVRVCTDKSFTGLFSPE-----RFASLDGLMS 410
Query: 584 FDNIWDEIS 592
FD IWDE+S
Sbjct: 411 FDQIWDELS 419