Miyakogusa Predicted Gene
- Lj5g3v0840940.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0840940.2 Non Chatacterized Hit- tr|I1L9L1|I1L9L1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7457
PE=,85.09,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; ATP-DEPENDENT RNA
HELICASE,NULL; HELICASE_ATP_BIND_1,Helicase, s,CUFF.54352.2
(1030 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G35920.1 | Symbols: | RNA helicase family protein | chr2:150... 1405 0.0
AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 811 0.0
AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 783 0.0
AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 783 0.0
AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 759 0.0
AT1G58060.1 | Symbols: | RNA helicase family protein | chr1:214... 514 e-145
AT1G58050.1 | Symbols: | RNA helicase family protein | chr1:214... 463 e-130
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prote... 311 2e-84
AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein | chr1... 310 3e-84
AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissu... 305 1e-82
AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |... 302 7e-82
AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase | chr1:204... 301 1e-81
AT2G47250.1 | Symbols: | RNA helicase family protein | chr2:193... 290 4e-78
AT3G62310.1 | Symbols: | RNA helicase family protein | chr3:230... 286 5e-77
AT4G18465.1 | Symbols: | RNA helicase family protein | chr4:101... 270 5e-72
AT1G26370.1 | Symbols: | RNA helicase family protein | chr1:912... 229 6e-60
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protei... 205 2e-52
AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein | c... 194 4e-49
AT1G27900.1 | Symbols: | RNA helicase family protein | chr1:971... 191 2e-48
AT5G10370.1 | Symbols: | helicase domain-containing protein / I... 182 9e-46
AT4G01020.1 | Symbols: | helicase domain-containing protein / I... 127 5e-29
AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosph... 122 2e-27
AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protei... 117 4e-26
AT5G14900.1 | Symbols: | helicase associated (HA2) domain-conta... 91 3e-18
AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase famil... 86 1e-16
>AT2G35920.1 | Symbols: | RNA helicase family protein |
chr2:15075674-15080506 FORWARD LENGTH=995
Length = 995
Score = 1405 bits (3638), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/960 (70%), Positives = 795/960 (82%), Gaps = 12/960 (1%)
Query: 75 EQRWWDPVWRAERLRQQQPEKEVFNENEWWDKIEKMQRGGEQELIIKRYFSIGDQQTLAD 134
EQRWWDPVWRAERLRQQQ E EV +ENEWW+KIE+ + GGEQE++IKR FS GDQQTL+D
Sbjct: 39 EQRWWDPVWRAERLRQQQAEMEVLDENEWWNKIEQWKTGGEQEMLIKRNFSRGDQQTLSD 98
Query: 135 MAYKQGLYFHAYNKGKTLVVSKVPLPDYRADLDERHGTTQKEIRMSTDIERRVGNLLNSS 194
MA + GLYFHAYNKGK LVVSKVPLPDYRADLDERHG+TQKEI+MST+ ER++G+LL ++
Sbjct: 99 MALQMGLYFHAYNKGKALVVSKVPLPDYRADLDERHGSTQKEIKMSTETERKLGSLLKTT 158
Query: 195 QSMETETASLPSV------STDLGHKQSMSTTKSVSSQQTDXXXXXXXXXXXXXXXXMQA 248
Q + AS + ++ LG K+ S +K S + + ++A
Sbjct: 159 QESGSSGASASAFNDQQDRTSTLGLKRPDSASKLPDSLEKEKFSFALKERQEK----LKA 214
Query: 249 SDALKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLR 308
++++K +K+FREKLPAFKMK EFL +VS+NQVLVVSGETGCGKTTQLPQFILEEE+S LR
Sbjct: 215 TESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLR 274
Query: 309 GADCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLL 368
GADCNIICTQP ERGE +GE+VGY IRLE+KRS +TRLLFCTTGVLL
Sbjct: 275 GADCNIICTQPRRISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLL 334
Query: 369 RQLVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSN 428
R+L++DP LT VSHLLVDEIHERGMNEDF +MSATINAD+FS
Sbjct: 335 RRLIEDPNLTNVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLRLILMSATINADMFST 394
Query: 429 YFGNAPTIHIPGFTFPVAEHYLEDVLEKTRYTIKP-EFDNFEGNXXXXXXXXXXXXXPLT 487
YFGN+PT+HIPGFTFPVAE +LEDVLEK+RY IK + N++G+ LT
Sbjct: 395 YFGNSPTMHIPGFTFPVAELFLEDVLEKSRYNIKSSDSGNYQGSSRGRRRESESKKDDLT 454
Query: 488 EMFEDVDVDTHYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWD 547
+FED+D+++HYK+YS R SLEAWSG+QID+ LVEA+IE+ICR EG GAILVFLTGWD
Sbjct: 455 TLFEDIDINSHYKSYSSATRNSLEAWSGAQIDVDLVEATIEHICRLEGGGAILVFLTGWD 514
Query: 548 EISKLLDKLKGNRLLGDPSKFLILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSI 607
EISKLL+K+ N LGD SKFL+LP+HGSMPTVNQ EIFDRPPPNKRKIVLATNIAESSI
Sbjct: 515 EISKLLEKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSI 574
Query: 608 TIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPKL 667
TIDDVVYVVDCGKAKETSYDALNK+ACLLPSWISKAS CYRLYPK+
Sbjct: 575 TIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKV 634
Query: 668 IHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTIG 727
I+DA P+YQL EI+RTPLQELCLHIKSLQ+G++ SFL KALQPPD+LAV+NAIELLKTIG
Sbjct: 635 IYDAFPQYQLPEIIRTPLQELCLHIKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIG 694
Query: 728 ALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPINRK 787
AL++ E+LTPLG+HLCT+P+DPNIGKMLL+G+IFQC+NPALTIAAALAYR+PFVLP+NRK
Sbjct: 695 ALNDVEELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRK 754
Query: 788 EEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMRMQ 847
EEAD AKR FAGDSCSDHIALLKA+EG+++AKR GNEKDFCW+NFLSP TLR+++DMR Q
Sbjct: 755 EEADEAKRYFAGDSCSDHIALLKAYEGYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQ 814
Query: 848 FLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKEVG 907
FL+LLSDIGFVDKS+ NAYNQYS+D+EM+ A+LCAGLYPNVVQCKRRGKRTA YTKE+G
Sbjct: 815 FLDLLSDIGFVDKSK-PNAYNQYSYDMEMISAVLCAGLYPNVVQCKRRGKRTAFYTKELG 873
Query: 908 KVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNISDYALLLFGGNLVPSKSGDG 967
KVDIHP SVNA V++F LPYLVYSEKVKTTS+YIRDSTNISDYALL+FGGNL+PSK+G+G
Sbjct: 874 KVDIHPGSVNARVNLFSLPYLVYSEKVKTTSVYIRDSTNISDYALLMFGGNLIPSKTGEG 933
Query: 968 IEMLGGYLHFSASKSVIELIKKLRGELDKLLNRKIVEPGLDVSGEGKGVVAAAVELLHNQ 1027
IEMLGGYLHFSASK+++ELI++LRGE+DKLLN+KI +P LD++ EGKGVV+A VELL +Q
Sbjct: 934 IEMLGGYLHFSASKNILELIQRLRGEVDKLLNKKIEDPSLDITVEGKGVVSAVVELLRSQ 993
>AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr5:1428796-1434516 FORWARD LENGTH=1161
Length = 1161
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/951 (44%), Positives = 587/951 (61%), Gaps = 25/951 (2%)
Query: 90 QQQPEKEVFNENEW-WDKIEKMQRGGEQELIIKRYFSIGDQQTLADMAYKQGLYFHAYNK 148
+ + V N +EW W + EQE++ + D + ++++A + GLY Y
Sbjct: 84 EHKASSSVANVDEWKWKLGILLANDSEQEIVSRDKRDRRDYEQISNLAKRMGLYSEIY-- 141
Query: 149 GKTLVVSKVPLPDYRADLDERHGTTQKEIRMSTDIERRVGNLLNSSQSMETETASLPSVS 208
GK +V SKVPLP+YR DLD++ Q+E+ + ++RRV LL + ++++ S +
Sbjct: 142 GKVVVASKVPLPNYRPDLDDKR--PQREVVLPLSLQRRVEGLLQ--EHLDSQQLSSGKAN 197
Query: 209 TDLGHKQSMSTTKSVSSQQTDXXXXXXXXXXXXXXXXM---------QASDALKEMKSFR 259
+ Q T+ + + +D M Q S + M FR
Sbjct: 198 ECVADSQPPKQTEELPDENSDSFLDGSVMEKVLQRRSMRMRNMQRTWQESPEGRTMLEFR 257
Query: 260 EKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADCNIICTQP 319
+ LP+FK K L+A+++NQV+VVSGETGCGKTTQLPQ+ILE E+ RGA CNIICTQP
Sbjct: 258 KTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCNIICTQP 317
Query: 320 XXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLVQDPELTG 379
ERGE LGETVG+ +RLE R T LLFCT+G+LLR+L+ D L G
Sbjct: 318 RRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLNG 377
Query: 380 VSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYFGNAPTIHIP 439
V+H+ VDEIHERGMNEDF +MSAT+NA+LFSNY+G APTIHIP
Sbjct: 378 VTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYYGGAPTIHIP 437
Query: 440 GFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXXXXXXXXXXXP------LTEMFEDV 493
GFT PV H+LEDVLE T Y + F+ + P +T + E+
Sbjct: 438 GFTHPVKAHFLEDVLEITGYKLT-SFNQVDDYGQEKTWKTQKQLMPRKRKNQITTLVEEA 496
Query: 494 DVDTHYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEISKLL 553
+++++Y+ R SL +W I L+EA + +ICR E GA+LVFLTGWD+I L
Sbjct: 497 LSKSNFESYNSRTRDSLSSWMPDCIGFNLIEAVLCHICRKERPGAVLVFLTGWDDIRSLS 556
Query: 554 DKLKGNRLLGDPSKFLILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVV 613
D++K + LLGDP++ L+L HGSM T Q IF+R PPN RKIVLATN+AE+SITI+DVV
Sbjct: 557 DQIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVV 616
Query: 614 YVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPKLIHDAMP 673
+VVDCGKAKET+YDALN CLLPSWIS+AS CY LYPK ++DA
Sbjct: 617 FVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVYDAFA 676
Query: 674 EYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTIGALDEKE 733
EYQL E+LRTPL LCL IKSLQ+ ++A FL ALQ P+SLAVQNAI LK IGALDEKE
Sbjct: 677 EYQLPELLRTPLNSLCLQIKSLQVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKE 736
Query: 734 DLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPINRKEEADAA 793
+LT LG+ L +P+DP +GKML+MG+IF+C +P LTI + L+ R+PF+LP ++K+ A +A
Sbjct: 737 NLTDLGKLLSILPVDPKLGKMLIMGAIFRCFDPILTIVSGLSVRDPFLLPQDKKDLALSA 796
Query: 794 KRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMRMQFLNLLS 853
K F+ SDH+AL++AFEGWK+A+R G+ +FCW NFLS TL+ I +R QF +L
Sbjct: 797 KLRFSAKDYSDHMALVRAFEGWKDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILK 856
Query: 854 DIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKEVGKVDIHP 913
+ G V N N+ SH+ +V A++C+GL+P + R + T + G+V ++
Sbjct: 857 EAGLVHDDLALN--NKLSHNQSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQVSLYA 914
Query: 914 SSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNISDYALLLFGGNLVPSKSGDGIEMLGG 973
+SVN+ P P+LV+ EKVK ++ IRDST + D +L+LFGG+L ++ML G
Sbjct: 915 NSVNSRFPTIPYPWLVFGEKVKVNAVLIRDSTGVPDSSLILFGGSLSTGVQVGHLKMLDG 974
Query: 974 YLHFSASKSVIELIKKLRGELDKLLNRKIVEPGLDVSGEGKGVVAAAVELL 1024
Y+ F ++ E KL+ ELDKLL +K+ +P +D+ EGK ++ A EL+
Sbjct: 975 YIDFFMDPNLAESYVKLKEELDKLLQKKLEDPSMDIHKEGKYLMLAVQELV 1025
>AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr1:17989517-17995169 REVERSE LENGTH=1206
Length = 1206
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/933 (43%), Positives = 580/933 (62%), Gaps = 21/933 (2%)
Query: 90 QQQPEKEVFNENEWWDKIEKMQRGGE-QELIIKRYFSIGDQQTLADMAYKQGLYFHAYNK 148
QQ + N ++W K+ + R E QE++ + D ++ +A + GL+ Y+K
Sbjct: 124 QQMAGSTLDNIDQWRFKLTMLLRNKEDQEVVSRERKDRRDFDHISALATRMGLHSRQYSK 183
Query: 149 GKTLVVSKVPLPDYRADLDERHGTTQKEI----RMSTDIERRVGNLLNSSQSMETETA-- 202
+V+SK PLP+YR DLD++ Q+E+ + ++++ + + L+ +++ E
Sbjct: 184 --IVVISKAPLPNYRPDLDDKR--PQREVVLPFGLQSEVDAHLHSFLDQKKTLIPEMPRQ 239
Query: 203 -SLPSVSTDLGHKQSMSTTKSVSSQQTDXXXXXXXXXXXXXXXXMQASDALKEMKSFREK 261
S S++ G+ ++ T S + + + + K M FR+
Sbjct: 240 NSSESLANGYGNYETPETVMQNSLARERILRPRSLQLKSKQQQWVDSPEGQK-MVGFRKT 298
Query: 262 LPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADCNIICTQPXX 321
LPA+K K LKA++ NQV+VVSGETGCGKTTQLPQ+ILE E+ RGA C+IICTQP
Sbjct: 299 LPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRR 358
Query: 322 XXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLVQDPELTGVS 381
ERGE +GE+VGY +RLE R +TRLLFCTTGVLLR+L+ D L GV+
Sbjct: 359 ISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVT 418
Query: 382 HLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYFGNAPTIHIPGF 441
H++VDEIHERGMNEDF +MSAT+NA+LFS+YFG AP +HIPGF
Sbjct: 419 HVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGF 478
Query: 442 TFPVAEHYLEDVLEKTRY--TIKPEFDNFEGNXX---XXXXXXXXXXXPLTEMFEDVDVD 496
T+PV H+LED LE + Y T + D++ ++ ED
Sbjct: 479 TYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQFKKRKSLISSAVEDALEA 538
Query: 497 THYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEISKLLDKL 556
+K Y+ R SL WS I L+E + +I + E GA+LVF+TGWD+I+ L ++L
Sbjct: 539 ADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQL 598
Query: 557 KGNRLLGDPSKFLILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVV 616
+ + LLGDP+K L+L HGSM + Q IFDRPP RKIVLATN+AE+SITI+DVVYV+
Sbjct: 599 EAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVI 658
Query: 617 DCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPKLIHDAMPEYQ 676
DCGKAKETSYDALN CLLPSWISKA+ CY LYP+ +++A +YQ
Sbjct: 659 DCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQ 718
Query: 677 LAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTIGALDEKEDLT 736
E+LRTPLQ LCL IKSL LG+++ FL +ALQPP++L+VQNA+E LK IGALD+ E+LT
Sbjct: 719 QPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLT 778
Query: 737 PLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPINRKEEADAAKRS 796
PLG++L +P++P +GKML++G+IF CL+P +T+ A L+ R+PF++P ++K+ A+ A+
Sbjct: 779 PLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSK 838
Query: 797 FAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMRMQFLNLLSDIG 856
F+G SDH+ L++A+ GWK+A+R+ + D+CW+NFLS TL+ +D MR QF NLL +
Sbjct: 839 FSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEAS 898
Query: 857 FVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKEVGKVDIHPSSV 916
+D G ++ SHD +V AI+CAG++P V + K L T E G+V ++ SSV
Sbjct: 899 LIDNIEGC---SKLSHDEHLVRAIICAGMFPGVCSVVNKEKSITLKTMEDGQVLLYSSSV 955
Query: 917 NAGVHIFPLPYLVYSEKVKTTSIYIRDSTNISDYALLLFGGNLVPSKSGDGIEMLGGYLH 976
N V + P P+LV+++KVK S+++RDST +SD LLLFG + ++MLGGYL
Sbjct: 956 NGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGDKISSGGFDGHLKMLGGYLE 1015
Query: 977 FSASKSVIELIKKLRGELDKLLNRKIVEPGLDV 1009
F ++ L+ ELD+L+ K+V P LD+
Sbjct: 1016 FFMKPTLAYTYLSLKRELDELIQNKLVNPKLDI 1048
>AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr1:17989670-17995169 REVERSE LENGTH=1197
Length = 1197
Score = 783 bits (2021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/933 (43%), Positives = 580/933 (62%), Gaps = 21/933 (2%)
Query: 90 QQQPEKEVFNENEWWDKIEKMQRGGE-QELIIKRYFSIGDQQTLADMAYKQGLYFHAYNK 148
QQ + N ++W K+ + R E QE++ + D ++ +A + GL+ Y+K
Sbjct: 124 QQMAGSTLDNIDQWRFKLTMLLRNKEDQEVVSRERKDRRDFDHISALATRMGLHSRQYSK 183
Query: 149 GKTLVVSKVPLPDYRADLDERHGTTQKEI----RMSTDIERRVGNLLNSSQSMETETA-- 202
+V+SK PLP+YR DLD++ Q+E+ + ++++ + + L+ +++ E
Sbjct: 184 --IVVISKAPLPNYRPDLDDKR--PQREVVLPFGLQSEVDAHLHSFLDQKKTLIPEMPRQ 239
Query: 203 -SLPSVSTDLGHKQSMSTTKSVSSQQTDXXXXXXXXXXXXXXXXMQASDALKEMKSFREK 261
S S++ G+ ++ T S + + + + K M FR+
Sbjct: 240 NSSESLANGYGNYETPETVMQNSLARERILRPRSLQLKSKQQQWVDSPEGQK-MVGFRKT 298
Query: 262 LPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADCNIICTQPXX 321
LPA+K K LKA++ NQV+VVSGETGCGKTTQLPQ+ILE E+ RGA C+IICTQP
Sbjct: 299 LPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRR 358
Query: 322 XXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLVQDPELTGVS 381
ERGE +GE+VGY +RLE R +TRLLFCTTGVLLR+L+ D L GV+
Sbjct: 359 ISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVT 418
Query: 382 HLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYFGNAPTIHIPGF 441
H++VDEIHERGMNEDF +MSAT+NA+LFS+YFG AP +HIPGF
Sbjct: 419 HVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGF 478
Query: 442 TFPVAEHYLEDVLEKTRY--TIKPEFDNFEGNXX---XXXXXXXXXXXPLTEMFEDVDVD 496
T+PV H+LED LE + Y T + D++ ++ ED
Sbjct: 479 TYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQFKKRKSLISSAVEDALEA 538
Query: 497 THYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEISKLLDKL 556
+K Y+ R SL WS I L+E + +I + E GA+LVF+TGWD+I+ L ++L
Sbjct: 539 ADFKGYNFRTRDSLSCWSPDSIGFNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQL 598
Query: 557 KGNRLLGDPSKFLILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVV 616
+ + LLGDP+K L+L HGSM + Q IFDRPP RKIVLATN+AE+SITI+DVVYV+
Sbjct: 599 EAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVI 658
Query: 617 DCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPKLIHDAMPEYQ 676
DCGKAKETSYDALN CLLPSWISKA+ CY LYP+ +++A +YQ
Sbjct: 659 DCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQ 718
Query: 677 LAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTIGALDEKEDLT 736
E+LRTPLQ LCL IKSL LG+++ FL +ALQPP++L+VQNA+E LK IGALD+ E+LT
Sbjct: 719 QPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLT 778
Query: 737 PLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPINRKEEADAAKRS 796
PLG++L +P++P +GKML++G+IF CL+P +T+ A L+ R+PF++P ++K+ A+ A+
Sbjct: 779 PLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSK 838
Query: 797 FAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMRMQFLNLLSDIG 856
F+G SDH+ L++A+ GWK+A+R+ + D+CW+NFLS TL+ +D MR QF NLL +
Sbjct: 839 FSGRDYSDHLTLVRAYNGWKDAERTHSGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEAS 898
Query: 857 FVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKEVGKVDIHPSSV 916
+D G ++ SHD +V AI+CAG++P V + K L T E G+V ++ SSV
Sbjct: 899 LIDNIEGC---SKLSHDEHLVRAIICAGMFPGVCSVVNKEKSITLKTMEDGQVLLYSSSV 955
Query: 917 NAGVHIFPLPYLVYSEKVKTTSIYIRDSTNISDYALLLFGGNLVPSKSGDGIEMLGGYLH 976
N V + P P+LV+++KVK S+++RDST +SD LLLFG + ++MLGGYL
Sbjct: 956 NGNVPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGDKISSGGFDGHLKMLGGYLE 1015
Query: 977 FSASKSVIELIKKLRGELDKLLNRKIVEPGLDV 1009
F ++ L+ ELD+L+ K+V P LD+
Sbjct: 1016 FFMKPTLAYTYLSLKRELDELIQNKLVNPKLDI 1048
>AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr2:88847-94635 REVERSE LENGTH=1113
Length = 1113
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/946 (43%), Positives = 570/946 (60%), Gaps = 21/946 (2%)
Query: 91 QQPEKEVF---NENEWWDKIEKMQRGG-EQELIIKRYFSIGDQQTLADMAYKQGLYFHAY 146
+QP++ F + ++W + + + +QE+I + D LA +A GLY HAY
Sbjct: 45 RQPQEGTFHCADLDDWNKRFSMLLKDSLKQEVISREKKDRRDFDKLAALATTLGLYSHAY 104
Query: 147 NKGKTLVVSKVPLPDYRADLDERHGTTQKEIRMSTDIERRVGNLLNSSQSMETETASLPS 206
K +V SK+PLP+YR DLD++ Q+E+ + TD+ +RV L S +
Sbjct: 105 --AKVVVFSKIPLPNYRFDLDDKK--PQREVNLHTDLLQRVEAYLTEYLSKSSNRIDRVP 160
Query: 207 VSTDLGHKQSMSTTKSVSSQ----QTDXXXXXXXXXXXXXXXXMQASDALKEMKSFREKL 262
++ ST + S Q QAS + M R L
Sbjct: 161 ANSVSRTSSISSTDEWFSEQPLPISATKILWQRSLQLRDRQQYWQASVEGQRMLDSRTSL 220
Query: 263 PAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADCNIICTQPXXX 322
PAFK + L A+S+NQV+V+SGETGCGKTTQ+PQFILE E+ RGA +IICTQP
Sbjct: 221 PAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQPRRI 280
Query: 323 XXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLVQDPELTGVSH 382
ERGE LGE+VGY +RLE + +TRLLFCTTG+LLR+L+ D L GV+H
Sbjct: 281 SAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRGVTH 340
Query: 383 LLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYFGNAPTIHIPGFT 442
++VDEIHERGMNEDF +MSAT++A+LFS+YFG A I+IPGFT
Sbjct: 341 VIVDEIHERGMNEDFLLIILKDLLSRRSELKLILMSATLDAELFSSYFGGAGVIYIPGFT 400
Query: 443 FPVAEHYLEDVLEKTRYTIKP--EFDNF--EGNXXXXXXXXXXXXXPLTEMFEDVDVDTH 498
+PV H+LED+LE TRY + P + D++ E +T + ED
Sbjct: 401 YPVRSHFLEDILEMTRYRLTPYNQIDDYGQERTWKMNKQIPKKRKSQITFVVEDALRAAD 460
Query: 499 YKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEISKLLDKLKG 558
+K +S R+SL W I L+E + IC NEG G IL+FLTGWD+IS L +KL+
Sbjct: 461 FKEFSPETRESLSCWYPDCIGFNLIEFLLCNICENEGPGGILIFLTGWDDISSLKEKLQI 520
Query: 559 NRLLGDPSKFLILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDC 618
+ + G+P ++L HGSM T Q IF+ P RKIVLATNIAE+SITI+DV +V+DC
Sbjct: 521 HPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDC 580
Query: 619 GKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPKLIHDAMPEYQLA 678
GKAKETSYDALN CLLPSWISK S CY LYPK ++DA EYQL
Sbjct: 581 GKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVYDAFAEYQLP 640
Query: 679 EILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTIGALDEKEDLTPL 738
EILRTPL LCL IKSL LG+++ FL +ALQ P+ LAVQ AI LK IGALDE EDLT L
Sbjct: 641 EILRTPLHSLCLQIKSLNLGSISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTL 700
Query: 739 GQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPINRKEEADAAKRSFA 798
G++L +P++P +GKML++G+I CL+P LT+AA L+ R+PF+ P ++K+ A+AAK F+
Sbjct: 701 GRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAGLSVRDPFLTPQDKKDLAEAAKSQFS 760
Query: 799 GDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMRMQFLNLLSDIGFV 858
D SDH+AL++A+EGWK+A+ D+CW+NFLS +LR ID +R +F +LL D G +
Sbjct: 761 RDH-SDHLALVRAYEGWKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGLI 819
Query: 859 DKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKEVGKVDIHPSSVNA 918
D + + N +D + A++C G+YP + + +L T E G+V ++ +S NA
Sbjct: 820 DGN--PSICNSEGNDANLTRAVICYGMYPGICSVVHNERSFSLKTMEDGQVLLYSNSENA 877
Query: 919 GVHIFPLPYLVYSEKVKTTSIYIRDSTNISDYALLLFGGNLVPSKSGDGIEMLGGYLHFS 978
P P+LV++EK+K S+++RDST SD L+LFGG++ + ++MLGGYL F
Sbjct: 878 RETKIPYPWLVFNEKIKVNSVFLRDSTACSDSTLILFGGSISKGDTDGHLKMLGGYLEFF 937
Query: 979 ASKSVIELIKKLRGELDKLLNRKIVEPGLDVSGEGKGVVAAAVELL 1024
V E+ + L+ ELD+L+ K++ P +D+ + + +A+ LL
Sbjct: 938 MKPDVAEIYQTLKKELDELIQNKLLNPKVDMQAHRE--LLSAIRLL 981
>AT1G58060.1 | Symbols: | RNA helicase family protein |
chr1:21489480-21501775 REVERSE LENGTH=1459
Length = 1459
Score = 514 bits (1324), Expect = e-145, Method: Compositional matrix adjust.
Identities = 323/911 (35%), Positives = 466/911 (51%), Gaps = 104/911 (11%)
Query: 203 SLPSVSTDLGHKQSMSTTKSVSSQQTDXXXXXXXXXXXXXXXXMQASDALKEMKSFREKL 262
SLP V + + K + KS + + D + + K+M R L
Sbjct: 555 SLPLVDSYVKDKDDLGVVKSNNRAKRDSYIEAECLSLQRKQENKKRTQKYKDMLKTRTAL 614
Query: 263 PAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADCNIICTQPXXX 322
P ++K+ L+ + + VLVV GETG GKTTQ+PQFIL++ + G CNIICTQP
Sbjct: 615 PISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRI 674
Query: 323 XXXXXXXXXXXERGE----ILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLVQDPELT 378
ER E + VGY +RLE+ RS +TRLLFCTTG+LLR+L D L
Sbjct: 675 AAISVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGDRTLN 734
Query: 379 GVSHLLVDEIHERGMNEDF------XXXXXXXXXXXXXXXXXXVMSATINADLFSNYFGN 432
V+H++VDE+HER + DF +MSAT++ADLFS YFG+
Sbjct: 735 DVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFSRYFGH 794
Query: 433 APTIHIPGFTFPVAEHYLEDVLEKTRYTIKPE-----------------FDNFEGNXXXX 475
P I G T PV H+LE++ E Y + P+ ++ G
Sbjct: 795 CPVITAQGRTHPVTTHFLEEIYESINYLLAPDSPAALRSDTSIKDKLGSVNDRRGKKNLV 854
Query: 476 XXXXXXXXXPLTEMFEDVDVDTHYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEG 535
+ V ++Y +YS +++L+ + +ID L+E I +I
Sbjct: 855 LAGWGDDYLLSEDCLNPFYVSSNYNSYSDQTQQNLKRLNEDRIDYELLEELICHIDDTCE 914
Query: 536 SGAILVFLTGWDEISKLLDKLKGNRLLGDPSKFLILPIHGSMPTVNQCEIFDRPPPNKRK 595
GAIL+FL G EI LLD L + P+ +LP+H S+ + Q ++F RPP RK
Sbjct: 915 EGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLPLHSSIASSEQRKVFLRPPKGLRK 974
Query: 596 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXX 655
++ ATNIAE+SITIDDVVYV+D GK KE Y+ KL+ ++ WIS+A+
Sbjct: 975 VIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRV 1034
Query: 656 XXXXCYRLYPKL-IHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSL 714
C+ LY + M YQ+ E+LR PL ELCL IK L LG + FL +AL+PP
Sbjct: 1035 KPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKPFLSRALEPPSEG 1094
Query: 715 AVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAAL 774
A+ +AI LL +GA++ E+LTPLG HL +P+D IGKMLL G IF CL+P L+IAA L
Sbjct: 1095 AMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFL 1154
Query: 775 AYRNPFVLPINRKEEADAAKRSFAGDSC------------SDHIALLKAFEGW------- 815
+Y++PF+ P + K+ D K + D+ SDH+ ++ A++ W
Sbjct: 1155 SYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQSDHLLMMVAYDKWVKILQER 1214
Query: 816 --KEAKRSGNEKDFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDK------------- 860
K A+R FC FLS + +R+I DMR+QF LL+DIG ++
Sbjct: 1215 GMKAAQR------FCESKFLSSSVMRMIRDMRVQFGTLLADIGLINLPKTGEFSGRKKEN 1268
Query: 861 -----SRGANAYNQYSHDLEMVCAILCAGLYPNVV------------QCKRRGKRTALYT 903
S +N YS E+V AILCAGLYPN+ ++G +T Y+
Sbjct: 1269 LDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITETTFNSLTKQGNQTKSYS 1328
Query: 904 KEVG---KVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNISDYALLLFGGNL- 959
+V IHPSS+N+ F P+LV+ EKV+T +Y+RD+T +S +++LLFGG++
Sbjct: 1329 AWYDGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRDTTIVSPFSILLFGGSIN 1388
Query: 960 VPSKSGDGIEMLGGYLHFSASKSVIELIKKLRGELDKLLNRKIVEPGLDVSGEGKGVVAA 1019
V +SG + G+L +A L K+LR L +L I +P E G+V
Sbjct: 1389 VHHQSGS--VTIDGWLKVAAPAQTAVLFKELRLTLHSILKDLIRKP------EKSGIV-- 1438
Query: 1020 AVELLHNQMIR 1030
HN++++
Sbjct: 1439 -----HNEVVK 1444
>AT1G58050.1 | Symbols: | RNA helicase family protein |
chr1:21478590-21487839 REVERSE LENGTH=1417
Length = 1417
Score = 463 bits (1191), Expect = e-130, Method: Compositional matrix adjust.
Identities = 299/847 (35%), Positives = 437/847 (51%), Gaps = 101/847 (11%)
Query: 253 KEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADC 312
K+M R LP ++K + L+ + + VLVV GETG GKTTQ+PQFIL++ + G C
Sbjct: 588 KDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYC 647
Query: 313 NIICTQPXXXXXXXXXXXXXXERGE----ILGETVGYHIRLETKRSAETRLLFCTTGVLL 368
NIICTQP ER E V Y +R + RS +TRLLFCTTG+LL
Sbjct: 648 NIICTQPRAITVAQRVAD---ERCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILL 704
Query: 369 RQLVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXX------XXXXXVMSATIN 422
R+LV D L V+H++VDE+HER + DF +MSAT++
Sbjct: 705 RKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVD 764
Query: 423 ADLFSNYFGNAPTIHIPGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXXXXXXXXX 482
A FS YFG P I G T PV ++LED+ E+T+Y + +
Sbjct: 765 AHQFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLLASD-----------SPAALSS 813
Query: 483 XXPLTEMFEDVDVDTHYKNYSLG---------------VRKSLEAWSGSQIDLGLVEASI 527
+T+ V+V KN L S++ + + +D L+E I
Sbjct: 814 DTSITDKLGSVNVPRGKKNLMLAGWGDSYLVSEDSLNTSYDSIKYIASAVVDYDLLEELI 873
Query: 528 EYICRNEGSGAILVFLTGWDEISKLLDKLKGNRLLGDPSKFLILPIHGSMPTVNQCEIFD 587
+I GAILVFL G EI+ LL++L + S +LP+H S+ + Q ++F
Sbjct: 874 CHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSSIASTEQKKVFL 933
Query: 588 RPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXX 647
RPP RK+++ATNIAE+SITI+DVVYV+D GK KE Y+ KL+ ++ W+SKA+
Sbjct: 934 RPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQ 993
Query: 648 XXXXXXXXXXXXCYRLYPK-LIHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEK 706
C+ LY + M YQ+ E+LR PL ELCLHIK L LG + FL K
Sbjct: 994 RMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFLSK 1053
Query: 707 ALQPPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNP 766
AL+PP A+ +AI LL +GAL+ E+LTPLG HL +P+D IGKMLL G IF CL+P
Sbjct: 1054 ALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSP 1113
Query: 767 ALTIAAALA-YRNPFVLPINRKEEADAAKRSFA--------------GDSCSDHIALLKA 811
L+IAA L+ ++PFV K+E + + A D SDH+ ++ A
Sbjct: 1114 ILSIAAFLSCCKSPFVYA---KDEQNVDRVKLALLSDKLESSSNLNNNDRQSDHLLMVVA 1170
Query: 812 FEGWKEAKRSGNEK---DFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRG----- 863
+E W K FC FL+ + +R++ + R++F LL+DIG ++ +G
Sbjct: 1171 YEKWVRILHEQGFKAAESFCESKFLNSSVMRMMRERRVEFGMLLADIGLINLPKGKGRRK 1230
Query: 864 ----------ANAYNQYSHDLEMVCAILCAGLYPNVVQC--------KRRGKRTALYTKE 905
+N YS + E+V AILCAGL PN+ + +R A++
Sbjct: 1231 ENFDVWFSDKTQPFNMYSQEPEVVKAILCAGLCPNIAEGLVNRLTKPAEETQRYAVWHDG 1290
Query: 906 VGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTS-IYIRDSTNISDYALLLFGGNL-VPSK 963
+V IH +S+N F P++V+ EK++T +Y++D+T +S +++LLFGG++ V +
Sbjct: 1291 KREVHIHRNSINKNCKAFQYPFIVFLEKLETKKVVYLQDTTVVSPFSILLFGGSINVHHQ 1350
Query: 964 SGDGIEMLGGYLHFSASKSVIELIKKLRGELDKLLNRKIVEPGLDVSGEGKGVVAAAVEL 1023
SG + G+L +A L K+LR L +L I +P E G+V
Sbjct: 1351 SGS--VTIDGWLKLTAPAQTAVLFKELRLTLHSILKDLIRKP------EKSGIV------ 1396
Query: 1024 LHNQMIR 1030
HN++++
Sbjct: 1397 -HNEVVK 1402
>AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1044
Length = 1044
Score = 311 bits (796), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 223/702 (31%), Positives = 341/702 (48%), Gaps = 90/702 (12%)
Query: 251 ALKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGA 310
AL+E++ R LP + + + LKAV ++QVLV+ G+TG GKTTQ+PQ+ L E RG
Sbjct: 393 ALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQY-LHEAGYTKRG- 450
Query: 311 DCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQ 370
+ CTQP E G LG VGY IR E S +T L + T G+LLR+
Sbjct: 451 --KVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRE 508
Query: 371 LVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYF 430
L+ +P+L S ++VDE HER ++ D + SAT++A+ FS+YF
Sbjct: 509 LLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYF 568
Query: 431 GNAPTIHIPGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXXXXXXXXXXXPLTEMF 490
AP PG +PV + YT PE D
Sbjct: 569 DTAPIFSFPGRRYPV----------EINYTSAPEAD------------------------ 594
Query: 491 EDVDVDTHYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEIS 550
+D +V +I I E G ILVF TG +EI
Sbjct: 595 --------------------------YMDAAIV--TILTIHVREPLGDILVFFTGQEEIE 626
Query: 551 KLLDKLKGNRLLGDPSK---FLILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSI 607
+ LK +R+ G +K +I PI+ ++P+ Q +IF+ P RK+VLATNIAE+S+
Sbjct: 627 TAEEILK-HRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSL 685
Query: 608 TIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPKL 667
TID + YVVD G +K SY+ + LL + ISKAS CYRLY
Sbjct: 686 TIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAF 745
Query: 668 -IHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTI 726
++ + E + E+ RT L + L +KSL + + +F + PP + A+ ++ELL +
Sbjct: 746 NYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINF--DFMDPPPAEALVKSLELLFAL 803
Query: 727 GALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNP-FVLPIN 785
GAL++ +LT G+ + PLDP + KM+++ ++C + ++IAA L+ F P +
Sbjct: 804 GALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKD 863
Query: 786 RKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMR 845
++ AD A+ +F + DHIALLK + WKE S +C+EN++ +++ D+R
Sbjct: 864 KQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQ---WCYENYIQVRSMKRARDIR 920
Query: 846 MQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKE 905
Q LL + +D S N +L+ V + AG +P+ + ++ G + K
Sbjct: 921 DQLEGLLERVE-IDISSNLN-------ELDSVRKSIVAGFFPHTAKLQKNGSYRTV--KH 970
Query: 906 VGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNI 947
V IHP N+G+ ++VY E V T+ Y+R T +
Sbjct: 971 PQTVHIHP---NSGLSQVLPRWVVYHELVLTSKEYMRQVTEL 1009
>AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1034
Length = 1034
Score = 310 bits (795), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 223/702 (31%), Positives = 341/702 (48%), Gaps = 90/702 (12%)
Query: 251 ALKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGA 310
AL+E++ R LP + + + LKAV ++QVLV+ G+TG GKTTQ+PQ+ L E RG
Sbjct: 383 ALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQY-LHEAGYTKRG- 440
Query: 311 DCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQ 370
+ CTQP E G LG VGY IR E S +T L + T G+LLR+
Sbjct: 441 --KVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRE 498
Query: 371 LVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYF 430
L+ +P+L S ++VDE HER ++ D + SAT++A+ FS+YF
Sbjct: 499 LLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYF 558
Query: 431 GNAPTIHIPGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXXXXXXXXXXXPLTEMF 490
AP PG +PV + YT PE D
Sbjct: 559 DTAPIFSFPGRRYPV----------EINYTSAPEAD------------------------ 584
Query: 491 EDVDVDTHYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEIS 550
+D +V +I I E G ILVF TG +EI
Sbjct: 585 --------------------------YMDAAIV--TILTIHVREPLGDILVFFTGQEEIE 616
Query: 551 KLLDKLKGNRLLGDPSK---FLILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSI 607
+ LK +R+ G +K +I PI+ ++P+ Q +IF+ P RK+VLATNIAE+S+
Sbjct: 617 TAEEILK-HRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSL 675
Query: 608 TIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPKL 667
TID + YVVD G +K SY+ + LL + ISKAS CYRLY
Sbjct: 676 TIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAF 735
Query: 668 -IHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTI 726
++ + E + E+ RT L + L +KSL + + +F + PP + A+ ++ELL +
Sbjct: 736 NYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINF--DFMDPPPAEALVKSLELLFAL 793
Query: 727 GALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNP-FVLPIN 785
GAL++ +LT G+ + PLDP + KM+++ ++C + ++IAA L+ F P +
Sbjct: 794 GALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKD 853
Query: 786 RKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMR 845
++ AD A+ +F + DHIALLK + WKE S +C+EN++ +++ D+R
Sbjct: 854 KQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQ---WCYENYIQVRSMKRARDIR 910
Query: 846 MQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKE 905
Q LL + +D S N +L+ V + AG +P+ + ++ G + K
Sbjct: 911 DQLEGLLERVE-IDISSNLN-------ELDSVRKSIVAGFFPHTAKLQKNGSYRTV--KH 960
Query: 906 VGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNI 947
V IHP N+G+ ++VY E V T+ Y+R T +
Sbjct: 961 PQTVHIHP---NSGLSQVLPRWVVYHELVLTSKEYMRQVTEL 999
>AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissue
and tapetum | chr2:13120585-13126635 REVERSE LENGTH=1299
Length = 1299
Score = 305 bits (781), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 176/460 (38%), Positives = 262/460 (56%), Gaps = 13/460 (2%)
Query: 517 QIDLGLVEASIEYICRNEGSGAILVFLTGWDEISKLLDKLKGNRLLGDPSKFLILPIHGS 576
Q+D+ L++ + IC + GAILVFL GWD+I+K +L N D +KF I+ +H
Sbjct: 532 QVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSM 591
Query: 577 MPTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 636
+P Q ++F+RPPP RKIVLATNIAES++TIDDVVYV+D G+ KE SYD N ++ L
Sbjct: 592 VPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 651
Query: 637 PSWISKASXXXXXXXXXXXXXXXCYRLYPKLIHDAMPEYQLAEILRTPLQELCLHIKSLQ 696
SW+SKA+ CY LY +L +MP++++ EI R P++ELCL +K L
Sbjct: 652 SSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILD 711
Query: 697 LGTVAS-FLEKALQPPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKML 755
+ FL+K L PP ++ NA+ +L+ IGAL +E+LT LG+ +P+ P I KML
Sbjct: 712 PNCKTNDFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKML 771
Query: 756 LMGSIFQCLNPALTIAAALAYRNPFVLPINRKEEADAAKRSFAGDS-C---SDHIALLKA 811
+ CL+PALT+A A Y+ PF +P++ E AA S C SDH+A++ A
Sbjct: 772 FFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAA 831
Query: 812 FEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQYS 871
FE WK AK G +FC + F+SP+ ++++D MR Q + L G + ++ +Q S
Sbjct: 832 FECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPND--ISSCSQNS 889
Query: 872 HDLEMVCAILCAGLYPNVVQ-CKRRG--KRTALYTKEVGKVDIH--PSSVNAGVHIFPLP 926
D ++ A+L GLYP V + C G +RT + T KV +H ++ N +
Sbjct: 890 RDPGILRAVLAVGLYPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNFNLSSKKYDES 949
Query: 927 YLVYSEKVK-TTSIYIRDSTNISDYALLLFGGNLVPSKSG 965
LV+ E + ++IR+ T D LLL + + +G
Sbjct: 950 LLVFDEITRGDGGMHIRNCTVARDLPLLLISTEIAVAPTG 989
Score = 180 bits (456), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 122/212 (57%), Gaps = 4/212 (1%)
Query: 246 MQASDALKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVS 305
++ ALKE+ R KLP K AV NQV+++SGETGCGKTTQ+PQ++L+ S
Sbjct: 171 LKKDKALKEITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWS 230
Query: 306 CLRGADCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTG 365
R C I+CTQP ERGE +GE +GY +RL++K + ++FCT G
Sbjct: 231 SKR-ETCKIVCTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNG 289
Query: 366 VLLRQLVQDPELTGVS---HLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATIN 422
+LLR LV ++ VS H++VDEIHER DF +MSAT++
Sbjct: 290 ILLRVLVGKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLD 349
Query: 423 ADLFSNYFGNAPTIHIPGFTFPVAEHYLEDVL 454
A+ FS YFG P + +PGFT+PV YLEDVL
Sbjct: 350 AERFSGYFGGCPVVRVPGFTYPVRTLYLEDVL 381
>AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |
chr3:9750122-9753719 REVERSE LENGTH=1168
Length = 1168
Score = 302 bits (774), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 227/694 (32%), Positives = 330/694 (47%), Gaps = 92/694 (13%)
Query: 259 REKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADCNIICTQ 318
RE LP +K+K E ++AV NQVLVV GETG GKTTQ+ Q++ E + I CTQ
Sbjct: 512 RESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT----KGKIGCTQ 567
Query: 319 PXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLVQDPELT 378
P E G LGE VGY IR E +T + + T G+LLR+++ D L+
Sbjct: 568 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 627
Query: 379 GVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYFGNAPTIHI 438
S +++DE HER ++ D V SAT++A+ FS YF N I
Sbjct: 628 QYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTI 687
Query: 439 PGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXXXXXXXXXXXPLTEMFEDVDVDTH 498
PG TFPV ++L YT +PE D
Sbjct: 688 PGRTFPV------EIL----YTKQPETD-------------------------------- 705
Query: 499 YKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEI----SKLLD 554
+D L+ ++ I E G ILVFLTG +EI L +
Sbjct: 706 ------------------YLDAALI--TVLQIHLTEPEGDILVFLTGQEEIDSACQSLYE 745
Query: 555 KLKGNRLLGDPSKFLILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVY 614
++KG L + + +ILP++ ++P+ Q IFD PPP KRK+V+ATNIAE+S+TID + Y
Sbjct: 746 RMKG--LGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYY 803
Query: 615 VVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPKLIH-DAMP 673
VVD G AK+ Y+ L L+ + IS+AS CYRLY + + + MP
Sbjct: 804 VVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMP 863
Query: 674 EYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTIGALDEKE 733
+ EI R L L +K++ + + SF + PP A+ +A+E L ++GALDE+
Sbjct: 864 PTSIPEIQRINLGMTTLTMKAMGINDLLSF--DFMDPPQPQALISAMEQLYSLGALDEEG 921
Query: 734 DLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPINRKEEADAA 793
LT LG+ + PL+P + KMLL C + LT+ A + N F P ++ +AD
Sbjct: 922 LLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQK 981
Query: 794 KRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMRMQFLNLLS 853
+ F DH+ LL +E WK SG +C+ENF+ +LR D+R Q L+++
Sbjct: 982 RAKFFQPE-GDHLTLLAVYEAWKAKNFSG---PWCFENFIQSRSLRRAQDVRKQLLSIMD 1037
Query: 854 DIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKEVGKVDIHP 913
+ G N ++ AI + + + G RT + E V IHP
Sbjct: 1038 KYKLDVVTAGKNF-------TKIRKAITAGFFFHGARKDPQEGYRTLV---ENQPVYIHP 1087
Query: 914 SSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNI 947
SS A P +++Y + V TT Y+R+ T I
Sbjct: 1088 SS--ALFQRQP-DWVIYHDLVMTTKEYMREVTVI 1118
>AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase |
chr1:2040567-2047333 FORWARD LENGTH=1576
Length = 1576
Score = 301 bits (772), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/451 (37%), Positives = 260/451 (57%), Gaps = 15/451 (3%)
Query: 517 QIDLGLVEASIEYICRNEGSGAILVFLTGWDEISKLLDKLKGNRLLGDPSKFLILPIHGS 576
++D+GL+ ++ IC + GAILVFL GW+EISK +KL +R +KF+IL +H
Sbjct: 556 EVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSR 615
Query: 577 MPTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 636
+P Q ++F+RPP RKIVLATNIAES++TIDDVVYV+D G+ KE SYD N ++ L
Sbjct: 616 VPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQ 675
Query: 637 PSWISKASXXXXXXXXXXXXXXXCYRLYPKLIHDAMPEYQLAEILRTPLQELCLHIKSLQ 696
SW+SKA+ CY LY KL ++PEY++ E++R P+ ELCL +K L
Sbjct: 676 SSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLD 735
Query: 697 LG-TVASFLEKALQPPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKML 755
V FL+K + PP + +++NA+ +LK IGAL +E+LT LGQ +P+ P I KM+
Sbjct: 736 PNCNVNDFLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRISKMI 795
Query: 756 LMGSIFQCLNPALTIAAALAYRNPFVLPIN--RKEEADAAKRSFA---GDSCSDHIALLK 810
+ CL+PAL +A A ++PF +P++ +++A AAK A GD SDH+A +
Sbjct: 796 YFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDH-SDHLATVA 854
Query: 811 AFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQY 870
AF+ WK AK SG K+FC + F+S ++ +DD+ + L+ G + S + N
Sbjct: 855 AFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPSSSSNCSLN-- 912
Query: 871 SHDLEMVCAILCAGLYPNVVQ-CKRRGKRTALYTKEVGKVDIHPSSVNAGVHI----FPL 925
+HD ++ A++ GLYP + + C RT + + + S++ V + F
Sbjct: 913 AHDPGILRAVIAVGLYPMLGRMCPLSKNRTRSVIETIAGAKVRVPSLSNNVDMSSTKFDE 972
Query: 926 PYLVYSEKVKTT-SIYIRDSTNISDYALLLF 955
+V+ E + + IR T + +LLF
Sbjct: 973 ALIVFDEITRGDWGVVIRSCTVLPTIPVLLF 1003
Score = 166 bits (420), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 123/215 (57%), Gaps = 10/215 (4%)
Query: 249 SDALKEMKSFRE------KLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEE 302
S LK+ + FRE KLP + + AV NQV++++GETGCGKTTQ+PQ++L+
Sbjct: 198 SSRLKKERHFREIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDH 257
Query: 303 EVSCLRGADCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFC 362
+ A C IICTQP ERGE +G TVGY +RL+++ E+ ++FC
Sbjct: 258 MWHSKKEA-CKIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFC 316
Query: 363 TTGVLLRQLVQ---DPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSA 419
T G+LLR L+ + + ++H++VDEIHER DF +MSA
Sbjct: 317 TNGILLRVLIGKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSA 376
Query: 420 TINADLFSNYFGNAPTIHIPGFTFPVAEHYLEDVL 454
T++A+ FS YFG P + +PGFT+PV +L+D L
Sbjct: 377 TLDAERFSEYFGGCPVVRVPGFTYPVRTFFLDDAL 411
>AT2G47250.1 | Symbols: | RNA helicase family protein |
chr2:19399923-19402981 REVERSE LENGTH=729
Length = 729
Score = 290 bits (742), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 228/757 (30%), Positives = 351/757 (46%), Gaps = 103/757 (13%)
Query: 259 REKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVS--CLRGADCNIIC 316
R LP + K +FL ++ NQ L++ GETG GKTTQ+PQF+L+ V+ +G + C
Sbjct: 62 RRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGC 121
Query: 317 TQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLVQDPE 376
TQP E +GE VGY IR E S+ T L + T G+LLR+ + DP
Sbjct: 122 TQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPL 181
Query: 377 LTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYFGNAPTI 436
L +++DE HER + D VMSAT+ A+ F YF AP +
Sbjct: 182 LERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLM 241
Query: 437 HIPGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXXXXXXXXXXXPLTEMFEDVDVD 496
+PG PV + YT +PE D E
Sbjct: 242 KVPGRLHPV----------EIFYTQEPERDYLEA-------------------------- 265
Query: 497 THYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEISKLLDKL 556
+R ++ ++C E G ILVFLTG +EI K+
Sbjct: 266 --------AIRTVVQI----------------HMC--EPPGDILVFLTGEEEIEDACRKI 299
Query: 557 -KGNRLLGD---PSKFLILPIHGSMPTVNQCEIFDRPP-------PNKRKIVLATNIAES 605
K LGD P K ++P++ ++P Q +IFD P P RKIV++TNIAE+
Sbjct: 300 NKEVSNLGDQVGPVK--VVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAET 357
Query: 606 SITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYP 665
S+TID +VYV+D G AK+ Y+ ++ LL S ISKAS C+RLY
Sbjct: 358 SLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYT 417
Query: 666 -KLIHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLK 724
K ++ + EILR+ L L +K L + + F + PP + A+E+L
Sbjct: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLN 475
Query: 725 TIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPI 784
+GALD++ +LT G+ + PLDP + KML++ F C N L+++A L+ N FV P
Sbjct: 476 YLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPR 535
Query: 785 NRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDM 844
++ AD AK F G DH+ LL + +K+ + + ++C+ENF++ ++ D++
Sbjct: 536 EAQKAADEAKARF-GHIDGDHLTLLNVYHAYKQ---NNEDPNWCFENFVNNRAMKSADNV 591
Query: 845 RMQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTK 904
R Q + ++S S N+ + Y + + + AG + V +R G +
Sbjct: 592 RQQLVRIMSRFNLKMCSTDFNSRDYYVN----IRKAMLAGYFMQVAHLERTGHYLTVKDN 647
Query: 905 EVGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNISDYALLLFGGNLVPSKS 964
+V V +HPS N H +++Y+E V TT +IR T+I L+ +
Sbjct: 648 QV--VHLHPS--NCLDH--KPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYD--- 698
Query: 965 GDGIEMLGGYLHFSASKSVIELIKKLRGELDKLLNRK 1001
L + + A +++ +L KK E ++ NRK
Sbjct: 699 ------LSNFPNCEAKRALEKLYKKREREKNESKNRK 729
>AT3G62310.1 | Symbols: | RNA helicase family protein |
chr3:23057516-23060561 REVERSE LENGTH=726
Length = 726
Score = 286 bits (732), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 217/705 (30%), Positives = 331/705 (46%), Gaps = 98/705 (13%)
Query: 259 REKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILE--EEVSCLRGADCNIIC 316
R LP + K EFLK ++ NQ L++ GETG GKTTQ+PQF+++ + + + + C
Sbjct: 58 RRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKWLVGC 117
Query: 317 TQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLVQDPE 376
TQP E +GE VGY IR E S T L + T G+LLR+ + DP
Sbjct: 118 TQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADPL 177
Query: 377 LTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYFGNAPTI 436
L +++DE HER + D VMSAT+ A+ F +YF AP +
Sbjct: 178 LERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSGAPLM 237
Query: 437 HIPGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXXXXXXXXXXXPLTEMFEDVDVD 496
+PG PV + YT +PE D E
Sbjct: 238 KVPGRLHPV----------EIFYTQEPERDYLEA-------------------------- 261
Query: 497 THYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEIS---KLL 553
+R ++ ++C E G ILVFLTG +EI + +
Sbjct: 262 --------AIRTVVQI----------------HMC--EPPGDILVFLTGEEEIEDACRKI 295
Query: 554 DKLKGNRLLGD---PSKFLILPIHGSMPTVNQCEIFDRPP-------PNKRKIVLATNIA 603
+K GN LGD P K ++P++ ++P Q +IFD P P RKIV++TNIA
Sbjct: 296 NKEVGN--LGDQVGPIK--VVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIA 351
Query: 604 ESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRL 663
E+S+TID +VYV+D G AK+ Y+ ++ LL S ISKAS C+RL
Sbjct: 352 ETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRL 411
Query: 664 YP-KLIHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIEL 722
Y K ++ + EILR+ L L +K L + + F + PP + A+E+
Sbjct: 412 YTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEV 469
Query: 723 LKTIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVL 782
L +GALD+ +LT G+ + PLDP + KML++ F C N L+++A L+ N F+
Sbjct: 470 LNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIR 529
Query: 783 PINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLID 842
P ++ AD AK F G DH+ LL + +K+ N +C+ENF++ ++ D
Sbjct: 530 PREAQKAADEAKARF-GHIEGDHLTLLNVYHAFKQNNEDPN---WCYENFINNRAMKSAD 585
Query: 843 DMRMQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALY 902
++R Q + ++S S N+ + Y + + + AG + V +R G +
Sbjct: 586 NVRQQLVRIMSRFNLKMCSTDFNSRDYYIN----IRKAMLAGYFMQVAHLERTGHYLTVK 641
Query: 903 TKEVGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNI 947
+V V +HPS N H +++Y+E V T+ +IR T+I
Sbjct: 642 DNQV--VHLHPS--NCLDH--KPEWVIYNEYVLTSRNFIRTVTDI 680
>AT4G18465.1 | Symbols: | RNA helicase family protein |
chr4:10197056-10201611 FORWARD LENGTH=695
Length = 695
Score = 270 bits (689), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 209/698 (29%), Positives = 333/698 (47%), Gaps = 76/698 (10%)
Query: 259 REKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADCNIICTQ 318
R++LP +K ++E L V + ++ GETG GKTTQ+PQ++ +E G I CTQ
Sbjct: 45 RQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYL--KEAGWAEGGRV-IACTQ 101
Query: 319 PXXXXXXXXXXXXXXERGEILGETVGYHIRLET-KRSAETRLLFCTTGVLLRQLVQDPEL 377
P E G LGE VGY IR E S T + F T GVL+R++++DP L
Sbjct: 102 PRRLAVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLL 161
Query: 378 TGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYFGNAPTIH 437
T S +++DE HER ++ D + SATI A SN+F ++ H
Sbjct: 162 TKYSVIMIDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKTMSNFFNSSKKRH 221
Query: 438 IPGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXXXXXXXXXXXPLTEMFEDVDVDT 497
P + P + ++P + EG V
Sbjct: 222 APEGSTPGPK-------------LEPAILSVEGR--------------------GFSVKI 248
Query: 498 HYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEIS---KLLD 554
HY V + + + S V ++I I E G +LVFLTG ++I KLL+
Sbjct: 249 HY------VEEPVSDYIRS------VVSTILLINEREPPGDVLVFLTGQEDIETAIKLLE 296
Query: 555 KLKGNRLLGDPSKFLILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVY 614
+ + + + S L LP++ + Q IF P KRK++L+TNIAE+S+T++ VVY
Sbjct: 297 E-EAHSNQKNSSGLLPLPLYSGLSRSEQELIFTPTPRGKRKVILSTNIAETSLTLEGVVY 355
Query: 615 VVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPK-LIHDAMP 673
V+D G +K+ Y+ ++ + L+ + ISKAS CYRLY + + MP
Sbjct: 356 VIDSGFSKQKFYNPISDIESLVVAPISKASARQRSGRAGRVRPGKCYRLYTEDYFLNQMP 415
Query: 674 EYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTIGALDEKE 733
+ E+ R+ L + +K+L + + F A PP S A+ A+E+L ++ LD+
Sbjct: 416 GEGIPEMQRSNLVSTVIQLKALGIDNILGFDWPA--PPSSEAMIRALEVLYSLQILDDDA 473
Query: 734 DLT-PLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPINRKEEADA 792
LT P G + +PLDP I KM+L S C + +TIAA L+ ++ +++ ++E D
Sbjct: 474 KLTSPTGFQVAELPLDPMISKMILASSELGCSHEIITIAAVLSVQSVWIIARGVQKEQDE 533
Query: 793 AKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMRMQFLNLL 852
AK FA + DH+ L ++G+ E+K+ +C++NFL+ +++ + ++R Q +
Sbjct: 534 AKLRFAA-AEGDHVTFLNVYKGFLESKKP---TQWCYKNFLNYQSMKKVVEIRDQLKRIA 589
Query: 853 SDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKEVG--KVD 910
+G KS D+E V + AG + N C+ +Y G +V
Sbjct: 590 RRLGITLKS--------CDGDMEAVRKAVTAGFFANA--CRLEPHSNGVYKTIRGSEEVY 639
Query: 911 IHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNIS 948
IHPSSV V+ ++VY V T Y+R+ I+
Sbjct: 640 IHPSSVLFRVN---PKWVVYQSIVSTERQYMRNVVTIN 674
>AT1G26370.1 | Symbols: | RNA helicase family protein |
chr1:9122030-9125368 REVERSE LENGTH=717
Length = 717
Score = 229 bits (585), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 209/753 (27%), Positives = 313/753 (41%), Gaps = 142/753 (18%)
Query: 253 KEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADC 312
+++ R LP ++ ++ V KN +L++ GETG GKTTQLPQF+ C G
Sbjct: 32 QKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGF-CREGKMI 90
Query: 313 NIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLV 372
I TQP E LG+ VGY IR + S TRL + T G+LLR+ +
Sbjct: 91 GI--TQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREAL 148
Query: 373 QDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXX----------XXXXVMSATIN 422
DP L+ S ++VDE H+R ++ D V + T +
Sbjct: 149 LDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRD 208
Query: 423 AD-------------------------------LFSNYFGNAPTIHIPGFTFPVAEHYLE 451
A+ +FS YFG A +H+ G FPV
Sbjct: 209 ANGPQQNGVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPV------ 262
Query: 452 DVLEKTRYTIKPEFDNFEGNXXXXXXXXXXXXXPLTEMFEDVDVDTHYKNYSLGVRKSLE 511
D+L YT+ PE D + L +F+ H++
Sbjct: 263 DIL----YTVHPESDYVDAT--------------LVTIFQ-----IHFE----------- 288
Query: 512 AWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEISKLLDKLKGNRLLG---DPSKF 568
E G ILVFLTG DEI +++L RL D K
Sbjct: 289 ----------------------EKPGDILVFLTGQDEIES-VERLVQERLQNIPEDKRKL 325
Query: 569 LILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDA 628
L L I ++P+ Q ++F P RK++LATNIAE+SITI + YV+D G K SYD
Sbjct: 326 LPLAIFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDP 385
Query: 629 LNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPKLIHDAMPEYQLAEILRTPLQEL 688
+ L SKA +RLYP+ + + + EI R L +
Sbjct: 386 SKGMESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNI 445
Query: 689 CLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTIGALDEKEDL-TPLGQHLCTIPL 747
L +K+L + + F + P A+ A+ L ++GAL + L P+G + +PL
Sbjct: 446 ILQLKALGIDDIVGF--DFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPL 503
Query: 748 DPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPINRKEEADAAKRSFAGDSCSDHIA 807
+P K L++ + F CL L A L+ + F P ++EEA +K FA DH+
Sbjct: 504 EPVYSKALILANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVE-GDHLT 562
Query: 808 LLKAFEGWKE------AKRSGNE-----KDFCWENFLSPATLRLIDDMRMQFLNLLSDIG 856
L + E A SGN K +C EN+++ +L+ D+ Q + IG
Sbjct: 563 YLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIG 622
Query: 857 FVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKEVGKVDIHPSSV 916
F S G +D+ L A + Q + G AL + EV V IHP+SV
Sbjct: 623 FNVSSCG--------NDMLAFRRCLAASFFLKAAQRQLDGTYRALESGEV--VHIHPTSV 672
Query: 917 NAGVHIFPLP--YLVYSEKVKTTSIYIRDSTNI 947
+F ++++E ++T+ YI++ T I
Sbjct: 673 -----LFRAKPECVIFNELMQTSKKYIKNLTII 700
>AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein |
chr2:14872728-14879615 FORWARD LENGTH=1044
Length = 1044
Score = 205 bits (521), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 225/416 (54%), Gaps = 24/416 (5%)
Query: 537 GAILVFLTGWDEISKLLDKLKGN-RLLGDPSKFLIL-PIHGSMPTVNQCEIFDRPPPNKR 594
G +LVFL G +EI + + LK R LG + LI+ PI+ ++P+ Q +IF+ P R
Sbjct: 613 GDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGAR 672
Query: 595 KIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXX 654
K+VLATNIAE+S+TID + YVVD G +K SY+ + LL + ISKAS
Sbjct: 673 KVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGR 732
Query: 655 XXXXXCYRLYPKL-IHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDS 713
CYRLY ++ + + + EI RT L + L +KSL + + +F + PP S
Sbjct: 733 TSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNF--DFMDPPPS 790
Query: 714 LAVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAA 773
A+ ++ELL +GAL++ +LT G+ + PLDP + KM+++ ++C + ++IAA
Sbjct: 791 EALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAM 850
Query: 774 LAYR-NPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENF 832
L+ + F P +++ AD A ++F + DHIA LK + WKE S +C+EN+
Sbjct: 851 LSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKETNYSTQ---WCYENY 907
Query: 833 LSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQC 892
+ +++ D+R Q LL + +D S AN +L+ + + AG +P+ +
Sbjct: 908 IQVRSMKRARDIRDQLEGLLERVE-IDVSSNAN-------ELDSIRKSIVAGFFPHTAKL 959
Query: 893 KRRGKRTALYTKEVGKVDIHPSSVNAGVHIFPLP-YLVYSEKVKTTSIYIRDSTNI 947
++ G + K V IHP+S + V LP ++VY + V T+ Y+R T +
Sbjct: 960 QKNGSYRTV--KHPQTVHIHPASGLSQV----LPRWVVYHQLVLTSKEYMRQVTEL 1009
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 100/195 (51%), Gaps = 4/195 (2%)
Query: 251 ALKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGA 310
A ++ R+ LP + + + L AV +QVL++ GETG GKTTQ+PQ++ E + L
Sbjct: 393 AFHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKL--- 449
Query: 311 DCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQ 370
+ CTQP E G LG VGY IR E S +T L + T G+LLR+
Sbjct: 450 -GKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRE 508
Query: 371 LVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYF 430
L+ +P+L S ++VDE HER + D + SAT++A+ FS++F
Sbjct: 509 LLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFF 568
Query: 431 GNAPTIHIPGFTFPV 445
AP PG +PV
Sbjct: 569 DQAPIFRFPGRRYPV 583
>AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein |
chr5:4122747-4128660 FORWARD LENGTH=1255
Length = 1255
Score = 194 bits (492), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 144/466 (30%), Positives = 224/466 (48%), Gaps = 32/466 (6%)
Query: 537 GAILVFLTGWDEISKLLDKLKGN--RLLGDPSK----FLILPIHGSMPTVNQCEIFDRPP 590
G IL+F+TG DEI LK +L+ S+ LILPI+ +P Q +IF +P
Sbjct: 767 GDILIFMTGQDEIEAACFSLKERMEQLVSSSSREITNLLILPIYSQLPADLQAKIFQKPE 826
Query: 591 PNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXX 650
RK ++ATNIAE+S+T+D + YV+D G K ++ + L IS+A+
Sbjct: 827 DGARKCIVATNIAETSLTVDGIYYVIDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAG 886
Query: 651 XXXXXXXXXCYRLYPKLIH-DAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQ 709
CYRLY + + + M + EI RT L + L +KSL++ + F +
Sbjct: 887 RAGRTGPGTCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVLLLKSLKIDNLLDF--DFMD 944
Query: 710 PPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALT 769
PP + N++ L +GAL+ LT LG + PLDP + KMLLMG C++ LT
Sbjct: 945 PPPQENILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLMGERLDCIDEVLT 1004
Query: 770 IAAALAYRNPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCW 829
I + L+ + F P R EE+DAA+ F SDH+ LL ++ WKE G D+C
Sbjct: 1005 IVSMLSVPSVFFRPKERAEESDAAREKFFVPE-SDHLTLLNVYQQWKEHDYRG---DWCN 1060
Query: 830 ENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNV 889
+++L LR ++R Q L++L + +S G D ++V +C+ + N
Sbjct: 1061 DHYLQVKGLRKAREVRSQLLDILKQLKIELRSCGP--------DWDIVRKAICSAYFHNS 1112
Query: 890 VQCKRRGK----RTALYTKEVGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDST 945
+ K G+ RT + +HPSS G+ P Y+VY E + TT Y++ +T
Sbjct: 1113 ARLKGVGEYVNCRTGM------PCHLHPSSALYGLGYTP-DYVVYHELILTTKEYMQCAT 1165
Query: 946 NISDYALLLFGGNLVPSKSGDGIEMLGGYLHFSASKSVIELIKKLR 991
++ + L G K D + + E ++KLR
Sbjct: 1166 SVEPHWLAELGPMFFSVKDSDTSMLEHKKKQKEEKSGMEEEMEKLR 1211
Score = 130 bits (328), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 253 KEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADC 312
K M R+ LP F ++ E L+ + +NQV+VV GETG GKTTQL Q++ E+ G
Sbjct: 549 KTMAEQRQYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHED------GYTI 602
Query: 313 NII--CTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQ 370
N I CTQP E LG+ +GY IR E T + + T GVLLR+
Sbjct: 603 NGIVGCTQPRRVAAMSVAKRVSEEMETELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRE 662
Query: 371 LVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYF 430
++D +L +++DE HER +N D V SAT+NA FSN+F
Sbjct: 663 TLKDSDLDKYRVVVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFF 722
Query: 431 GNAPTIHIPGFTFPV 445
G+ P +IPG TFPV
Sbjct: 723 GSVPIFNIPGRTFPV 737
>AT1G27900.1 | Symbols: | RNA helicase family protein |
chr1:9715615-9720346 REVERSE LENGTH=700
Length = 700
Score = 191 bits (486), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 212/422 (50%), Gaps = 17/422 (4%)
Query: 534 EGSGAILVFLTGWDEISKLLDKLKGN-RLLGDPS--KFLILPIHGSMPTVNQCEIFDRPP 590
E G IL+F+TG D+I KL+ +L+ R L + S +I P+HGS+P Q +F PP
Sbjct: 211 EPEGDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPP 270
Query: 591 PNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXX 650
PN R+ +++TNIAE+S+T+D VVYV+D G K+ Y+ + + L ISK
Sbjct: 271 PNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAG 330
Query: 651 XXXXXXXXXCYRLYPKLIH-DAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQ 709
CYRLYP ++ D + + EI RT L L++KSL L + L
Sbjct: 331 RAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLD 390
Query: 710 PPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALT 769
P S ++++A++ L I A+DE +T +G+ + +PL+P++ + L+ + CL+ ALT
Sbjct: 391 APSSESLEDALKQLYFIDAIDENGAITRIGRTMSDLPLEPSLSRTLIEANETGCLSQALT 450
Query: 770 IAAALAYRNPFV----LPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEK 825
+ A L+ + P +K + D G DHI LL+ FE W R+ +
Sbjct: 451 VVAMLSAETTLLPARSKPSEKKRKHDEDSNLPNGSGYGDHIQLLQIFESW---DRTNYDP 507
Query: 826 DFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQYSH-DLEMVCAILCAG 884
+C EN + + + D+R Q ++ I GA+ S D + LC G
Sbjct: 508 VWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVG 567
Query: 885 LYPNVVQ--CKRRGKRTALYTKEVGKVDIHPSSVNAGVHIFPLP-YLVYSEKVKTTSIYI 941
+ + + G RT + ++ V +HPSSV + + +P Y+VY E + TT ++
Sbjct: 568 NANQIAERMLRHNGYRTLSFQSQL--VQVHPSSVLSADNDGMMPNYVVYHELISTTRPFM 625
Query: 942 RD 943
R+
Sbjct: 626 RN 627
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 262 LPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADCNIICTQPXX 321
LP + + + ++ V KN V+V+ GETG GK+TQL Q IL G I TQP
Sbjct: 4 LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQ-ILHRHGYTKSGV---IAITQPRR 59
Query: 322 XXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLVQDPELTGVS 381
E LGE VGY IR E + +++TR+ + T GVLLR+ + +P L S
Sbjct: 60 VAAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYS 119
Query: 382 HLLVDEIHERGMNED-FXXXXXXXXXXXXXXXXXXVMSATINADLFSNYFGNAPTIHIPG 440
+++DE HER +N D + SAT++ + S +F P +++PG
Sbjct: 120 VIILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPG 179
Query: 441 FTFPVAEHY 449
+PV Y
Sbjct: 180 KLYPVEILY 188
>AT5G10370.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr5:3261245-3267188 FORWARD LENGTH=1775
Length = 1775
Score = 182 bits (463), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 156/600 (26%), Positives = 263/600 (43%), Gaps = 80/600 (13%)
Query: 253 KEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADC 312
+E + + LP + + + LK + + Q++V+ GETG GK+TQL QF+ + V+ A
Sbjct: 297 RECRRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVA----ASE 352
Query: 313 NIICTQPXXXXXXXXXXXXXXERGEILGE-TVGYHIRLETKRSAETRLLFCTTGVLLRQL 371
+I+CTQP E E TV + +++++ T LL+
Sbjct: 353 SIVCTQPRKIAAMTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHY 412
Query: 372 VQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYFG 431
++D L+G+S +++DE HER +N D +MSAT +A S YF
Sbjct: 413 MKDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFF 472
Query: 432 NAPTIHIPGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXXXXXXXXXXXPLTEMFE 491
+ + + G F P+ ++
Sbjct: 473 SCGILLVNGRNF-----------------------------------------PVEIVYS 491
Query: 492 DVDVDTHYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEISK 551
D + +N +G + ++ G +V+ ++E I + E G IL FLT E+
Sbjct: 492 PSDTE---ENSVVG---GIASYVGD-----VVKMAVE-IHKTEKEGTILAFLTSQAEVEW 539
Query: 552 LLDKLKGNRLLGDPSKFLILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSITIDD 611
++ PS + LP+HG + Q +F P +RK++ ATNIAE+S+TI
Sbjct: 540 ACERFI------TPSA-IALPLHGKLSFEEQFRVFQNHP-GRRKVIFATNIAETSLTIPG 591
Query: 612 VVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPKLIHDA 671
V YV+D G KE+ Y+ ++ L +S++S CYRLY K D+
Sbjct: 592 VKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDS 651
Query: 672 MPEYQLAEILRTPLQELCLHIKSLQLGTVA--SFLEKALQPPDSLAVQNAIELLKTIGAL 729
M Q EI R L L + +L + +A +F++ + ++AVQN ++L GA+
Sbjct: 652 MNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQL----GAV 707
Query: 730 DEK---EDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPI-- 784
EK +LT G L + L+P +GK++L + + +AA +A + +
Sbjct: 708 VEKNGVHELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGN 767
Query: 785 -NRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDD 843
+ K +AD K F + D LL ++ W R K +CWEN L+ ++R +D
Sbjct: 768 FDDKMKADRLKVQFCNQN-GDLFTLLSVYKEWASLPRERRNK-WCWENSLNAKSMRRCED 825
>AT4G01020.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr4:439086-445043 FORWARD LENGTH=1787
Length = 1787
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 190/409 (46%), Gaps = 38/409 (9%)
Query: 522 LVEASIEYICRNEGSGAILVFLTGWDEISKLLDKLKGNRLLGDPSKFLILPIHGSMPTVN 581
+V+ ++E I + E G IL FLT E+ ++ PS + LP+HG +
Sbjct: 508 VVKMAVE-IHKTEKEGTILAFLTSQAEVEWACERFVA------PSA-IALPLHGKLSFEE 559
Query: 582 QCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWIS 641
Q +F P +RK++ ATNIAE+S+TI V YV+D G KE+ Y+ ++ L +S
Sbjct: 560 QFMVFQNYP-GRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVS 618
Query: 642 KASXXXXXXXXXXXXXXXCYRLYPKLIHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVA 701
++S CYRLY K D+M Q EI R L L + +L + +A
Sbjct: 619 QSSARQRAGRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRMLALGIDNIA 678
Query: 702 SFLEKALQPPDSLAVQNAIELLKTIGALDEKE---DLTPLGQHLCTIPLDPNIGKMLLMG 758
+F + + P A+ AI+ L +GA+ EK +LT G L + L+P +GK++L
Sbjct: 679 AF--EFVDAPVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILGC 736
Query: 759 SIFQCLNPALTIAAALAYRNPFVLPI---NRKEEADAAKRSFAGDSCSDHIALLKAFEGW 815
+ + +AA +A + + + K +AD K F D+ D LL ++ W
Sbjct: 737 FRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNDN-GDLFTLLSVYKEW 795
Query: 816 KEAKRSGNEKDFCWENFLSPATLRLIDDMRMQF-------LNLLSDIGFVDKSRGANAYN 868
R K +CWEN L+ ++R +D + L L+S +V ++
Sbjct: 796 ASLPRDRRNK-WCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHD 854
Query: 869 QYSHDLEMVCAILCAGLYPNVVQ---CKRRGKRTALYTKEVGKVDIHPS 914
+Y L+MV + A L NV + G AL +++ V +HPS
Sbjct: 855 KY---LKMV---ILASLAENVAMYTGYDQLGYEVALTSQQ---VQLHPS 894
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 5/195 (2%)
Query: 252 LKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGAD 311
L+E + + LP + + + LK + Q++V+ GETG GK+TQL QF+ + V+ A
Sbjct: 293 LRECRRLEDGLPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVA----AS 348
Query: 312 CNIICTQPXXXXXXXXXXXXXXERGEILGE-TVGYHIRLETKRSAETRLLFCTTGVLLRQ 370
+I+CTQP E E TV + +++++ T LL+
Sbjct: 349 ESIVCTQPRKIAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQH 408
Query: 371 LVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYF 430
++D L+G+S +++DE HER +N D +MSAT +A+ S Y
Sbjct: 409 YMKDRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYL 468
Query: 431 GNAPTIHIPGFTFPV 445
+ +H+ G FPV
Sbjct: 469 FDCGILHVNGRNFPV 483
>AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:9388613-9390774
REVERSE LENGTH=656
Length = 656
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 107/212 (50%), Gaps = 12/212 (5%)
Query: 251 ALKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGA 310
A ++ + RE LP + E LK + +NQVLV+ GETG GKTTQ+PQ+ L+E RG
Sbjct: 204 AAEKAREGREFLPIHGYREELLKLIEENQVLVIVGETGSGKTTQIPQY-LQEAGYTKRG- 261
Query: 311 DCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQ 370
I CTQP E G LG VGY IR E S +T + + T G+LLR+
Sbjct: 262 --KIGCTQPRRVAAMSVASRVAQEVGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLRE 319
Query: 371 LVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYF 430
L+ +P+L S +++DE HER ++ D + SAT+ A FS YF
Sbjct: 320 LLIEPKLDSYSVIIIDEAHERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKFSEYF 379
Query: 431 GNAPTIHIPGFTFPVAE--------HYLEDVL 454
+A IPG +PV + YLE V+
Sbjct: 380 DSARIYLIPGRRYPVEKLFRKCPEPDYLETVI 411
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 119/219 (54%), Gaps = 7/219 (3%)
Query: 520 LGLVEASIEYICRNEGSGAILVFLTGWDEISKLLDKLKGNRL-LGDP-SKFLILPIHGSM 577
L V ++ I + E G ILVFLTG +EI + LK + LG S+ +I PI+ ++
Sbjct: 407 LETVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMMDLGTKGSEIIICPIYSNL 466
Query: 578 PTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLP 637
PT Q ++F+ P RK+VLATNIAE+S+TID V YV+D G K SY+ + LL
Sbjct: 467 PTPLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINSYNPRTGMESLLV 526
Query: 638 SWISKASXXXXXXXXXXXXXXXCYRLYPKLIHDAMPEYQLAEILRTPLQELCLHIKSLQL 697
+ ISKAS C+RLY I D P + EI R L + L +KSL +
Sbjct: 527 TPISKASAAQRAGRSGRTGPGKCFRLYN--IKDLEPT-TIPEIQRANLASVVLTLKSLGI 583
Query: 698 GTVASFLEKALQPPDSLAVQNAIELLKTIGALDEKEDLT 736
V +F + PP A+ A+ELL +GALDE ++T
Sbjct: 584 QDVFNF--DFMDPPPENALLKALELLYALGALDEIGEIT 620
>AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protein |
chr1:12099738-12104108 REVERSE LENGTH=1237
Length = 1237
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 188/443 (42%), Gaps = 73/443 (16%)
Query: 565 PSKFLILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKET 624
P K +LP++ + Q +F+ +R +V+ATN+AE+S+TI + YVVD G+ K
Sbjct: 644 PGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVK 703
Query: 625 SYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPKLI-HDAMPEYQLAEILRT 683
+YD+ + WIS+AS CYRLY + + E L EI++
Sbjct: 704 NYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKV 763
Query: 684 PLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLC 743
P+ + L +KS+ + V +F PP+ A++ A LK + ALD LTPLG+ +
Sbjct: 764 PVDGVILLMKSMNIPKVENF--PFPTPPEPSAIREAERCLKALEALDSNGGLTPLGKAMS 821
Query: 744 TIPLDPNIGKMLLMGSIFQCLNPALTIAAA-------------LAYRNPFVLPI------ 784
P+ P +MLL ++ Q L + A L+ NP ++
Sbjct: 822 HYPMSPRHSRMLL--TVIQMLKETRNYSRANLILGYAVAAVAALSLPNPLIMEFEGEKKN 879
Query: 785 ------------------NRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKD 826
+RKE+ AA+ F+ S SD + + A + + S N
Sbjct: 880 ESKDADKTVKQEDKQRKKDRKEKIKAARDRFSNPS-SDALTVAYALHSF---EVSENGMG 935
Query: 827 FCWENFLSPATLRLIDDMRMQFLNLLSD-----------------IGFVDKS-RGANAYN 868
FC N L T+ + ++ Q L L+ + I V+KS R + +
Sbjct: 936 FCEANGLHLKTMDEMSKLKDQLLRLVFNCCKPSETEDSFSWTHGTIQDVEKSWRITTSTS 995
Query: 869 QYS----HDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKEVGKVDIHPSSVNAGVHIFP 924
+ ++ E++ +CAG V + R + A +E + S +N+ +
Sbjct: 996 SKTPLLQNEEELLGEAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSLINSAPEL-- 1053
Query: 925 LPYLVYSEKVKTTSIYIRDSTNI 947
LVYSE + T Y+ +T +
Sbjct: 1054 ---LVYSELLLTNRPYMHGATRV 1073
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 254 EMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILE-----EEVSCLR 308
E++ R+ LP M+ E ++A++++ +++SG+TGCGKTTQ+PQF+ E ++ S
Sbjct: 233 EVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRS 292
Query: 309 GADCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLL 368
G I TQP E G LG+ VG+ +R + K + + F T G+LL
Sbjct: 293 GI---IGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILL 349
Query: 369 RQLVQDPELTGVSHLLVDEIHERGMNEDF 397
R++ D L S +++DE HER +N D
Sbjct: 350 REIQNDFLLRRYSVIILDEAHERSLNTDI 378
>AT5G14900.1 | Symbols: | helicase associated (HA2)
domain-containing protein | chr5:4822676-4823581 REVERSE
LENGTH=301
Length = 301
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 125/266 (46%), Gaps = 15/266 (5%)
Query: 683 TPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTIGALDEKEDLTPLGQHL 742
T L L +K L + + F PD+LA A++ L +GALD+ +LT G+ +
Sbjct: 2 TNLANTVLTLKGLSVKNLVRFDLIDSPAPDTLA--RALDDLYHLGALDDDCNLTKTGEMM 59
Query: 743 CTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPINRKEE-ADAAKRSFAGDS 801
PLDP + KML++ F C N L+I+A L+ N F+ P ++ AD AK SFA
Sbjct: 60 SEFPLDPQMAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHID 119
Query: 802 CSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKS 861
DH+ LL F + + + N +C F++ ++ +R Q + ++ S
Sbjct: 120 -GDHLTLLNLFHAFLQNNQDPN---WCCTKFINYRAMKSAVSVREQLVRIMLRFQIKLCS 175
Query: 862 RGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKEVGKVDIHPSSVNAGVH 921
N+ + Y + + L AG + V +R G K+ V +HPS N H
Sbjct: 176 PDFNSRDYYVN----IRKALLAGYFMQVAHLERTGHYLTFRDKDDQVVHLHPS--NCLDH 229
Query: 922 IFPLPYLVYSEKVKTTSIYIRDSTNI 947
++VY+E V T+ +IR T+I
Sbjct: 230 --KPEWVVYNEYVFTSRNFIRTVTHI 253
>AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase family
protein | chr2:19545828-19550871 REVERSE LENGTH=1015
Length = 1015
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 262 LPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADCNIICTQPXX 321
LP MK + + +N+V ++ GE GCGK++Q+PQF+LE ++ I+CTQP
Sbjct: 26 LPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLEANMA-------PILCTQPRR 78
Query: 322 XXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLVQDPELTGVS 381
R LG +GYHI + +++LF T GVLL +++ D L +
Sbjct: 79 FAVVAVAKMVAKSRNSDLGGEIGYHIGHSKILTEGSKILFKTAGVLLDEML-DKGLNALK 137
Query: 382 H--LLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYF 430
+ +++DE+HER + D +MSAT + + +YF
Sbjct: 138 YKVIILDEVHERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYF 188
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 7/163 (4%)
Query: 592 NKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXX 651
++RK++LATNIAESS+TI V YV+D ++ + +D K + W+S++
Sbjct: 320 SRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLVWVSRSQAEQRRGR 379
Query: 652 XXXXXXXXCYRLYPKLIHDAMPEYQLAEILRTPLQELCLHI---KSLQLGTVASFLEKAL 708
YRL P + + E++ IL+ L++ LHI +S + + L KA+
Sbjct: 380 TGRTCDGEVYRLVPSAFFNKLEEHEPPSILKLSLRQQVLHICCTESRAINDANALLAKAM 439
Query: 709 QPPDSLAVQNAIELLKTIGALDE----KEDLTPLGQHLCTIPL 747
PPD V +A+ +L +I AL + + + T G+ L + PL
Sbjct: 440 DPPDPDVVDDALRMLLSIQALRKSPRGRYEPTFYGRLLASFPL 482