Miyakogusa Predicted Gene
- Lj5g3v0840940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0840940.1 Non Chatacterized Hit- tr|I1L9L1|I1L9L1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7457
PE=,87.2,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; ATP-DEPENDENT RNA
HELICASE,NULL; HELICASE_ATP_BIND_1,Helicase, s,CUFF.54352.1
(921 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G35920.1 | Symbols: | RNA helicase family protein | chr2:150... 1338 0.0
AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 810 0.0
AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 780 0.0
AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 780 0.0
AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 760 0.0
AT1G58060.1 | Symbols: | RNA helicase family protein | chr1:214... 514 e-145
AT1G58050.1 | Symbols: | RNA helicase family protein | chr1:214... 463 e-130
AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein | chr1... 311 1e-84
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prote... 311 2e-84
AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissu... 305 9e-83
AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase | chr1:204... 302 8e-82
AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |... 302 8e-82
AT2G47250.1 | Symbols: | RNA helicase family protein | chr2:193... 291 2e-78
AT3G62310.1 | Symbols: | RNA helicase family protein | chr3:230... 286 3e-77
AT4G18465.1 | Symbols: | RNA helicase family protein | chr4:101... 270 4e-72
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protei... 205 1e-52
AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein | c... 194 2e-49
AT1G27900.1 | Symbols: | RNA helicase family protein | chr1:971... 191 2e-48
AT5G10370.1 | Symbols: | helicase domain-containing protein / I... 180 5e-45
AT1G26370.1 | Symbols: | RNA helicase family protein | chr1:912... 175 1e-43
AT4G01020.1 | Symbols: | helicase domain-containing protein / I... 127 4e-29
AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosph... 121 2e-27
AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protei... 117 3e-26
AT5G14900.1 | Symbols: | helicase associated (HA2) domain-conta... 91 4e-18
AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase famil... 86 2e-16
>AT2G35920.1 | Symbols: | RNA helicase family protein |
chr2:15075674-15080506 FORWARD LENGTH=995
Length = 995
Score = 1338 bits (3463), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 645/922 (69%), Positives = 762/922 (82%), Gaps = 12/922 (1%)
Query: 4 GGEQELIIKRYFSIGDQQTLADMAYKQGLYFHAYNKGKTLVVSKVPLPDYRADLDERHGT 63
GGEQE++IKR FS GDQQTL+DMA + GLYFHAYNKGK LVVSKVPLPDYRADLDERHG+
Sbjct: 77 GGEQEMLIKRNFSRGDQQTLSDMALQMGLYFHAYNKGKALVVSKVPLPDYRADLDERHGS 136
Query: 64 TQKEIRMSTDIERRVGNLLNSSQSMETETASLPSV------STDLGHKQSMSTTKSVSSQ 117
TQKEI+MST+ ER++G+LL ++Q + AS + ++ LG K+ S +K S
Sbjct: 137 TQKEIKMSTETERKLGSLLKTTQESGSSGASASAFNDQQDRTSTLGLKRPDSASKLPDSL 196
Query: 118 QTDXXXXXXXXXXXXXXXXMQASDALKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGE 177
+ + ++A++++K +K+FREKLPAFKMK EFL +VS+NQVLVVSGE
Sbjct: 197 EKEKFSFALKERQEK----LKATESVKALKAFREKLPAFKMKEEFLNSVSQNQVLVVSGE 252
Query: 178 TGCGKTTQLPQFILEEEVSCLRGADCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYH 237
TGCGKTTQLPQFILEEE+S LRGADCNIICTQP ERGE +GE+VGY
Sbjct: 253 TGCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVASRISAERGESIGESVGYQ 312
Query: 238 IRLETKRSAETRLLFCTTGVLLRQLVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXX 297
IRLE+KRS +TRLLFCTTGVLLR+L++DP LT VSHLLVDEIHERGMNEDF
Sbjct: 313 IRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVSHLLVDEIHERGMNEDFLLIILRDLL 372
Query: 298 XXXXXXXXXVMSATINADLFSNYFGNAPTIHIPGFTFPVAEHYLEDVLEKTRYTIKP-EF 356
+MSATINAD+FS YFGN+PT+HIPGFTFPVAE +LEDVLEK+RY IK +
Sbjct: 373 PRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVLEKSRYNIKSSDS 432
Query: 357 DNFEGNXXXXXXXXXXXXXPLTEMFEDVDVDTHYKNYSLGVRKSLEAWSGSQIDLGLVEA 416
N++G+ LT +FED+D+++HYK+YS R SLEAWSG+QID+ LVEA
Sbjct: 433 GNYQGSSRGRRRESESKKDDLTTLFEDIDINSHYKSYSSATRNSLEAWSGAQIDVDLVEA 492
Query: 417 SIEYICRNEGSGAILVFLTGWDEISKLLDKLKGNRLLGDPSKFLILPIHGSMPTVNQCEI 476
+IE+ICR EG GAILVFLTGWDEISKLL+K+ N LGD SKFL+LP+HGSMPTVNQ EI
Sbjct: 493 TIEHICRLEGGGAILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSMPTVNQREI 552
Query: 477 FDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASX 536
FDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNK+ACLLPSWISKAS
Sbjct: 553 FDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASA 612
Query: 537 XXXXXXXXXXXXXXCYRLYPKLIHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLE 596
CYRLYPK+I+DA P+YQL EI+RTPLQELCLHIKSLQ+G++ SFL
Sbjct: 613 HQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSLQVGSIGSFLA 672
Query: 597 KALQPPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLN 656
KALQPPD+LAV+NAIELLKTIGAL++ E+LTPLG+HLCT+P+DPNIGKMLL+G+IFQC+N
Sbjct: 673 KALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVN 732
Query: 657 PALTIAAALAYRNPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEK 716
PALTIAAALAYR+PFVLP+NRKEEAD AKR FAGDSCSDHIALLKA+EG+++AKR GNEK
Sbjct: 733 PALTIAAALAYRSPFVLPLNRKEEADEAKRYFAGDSCSDHIALLKAYEGYRDAKRGGNEK 792
Query: 717 DFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILCAGL 776
DFCW+NFLSP TLR+++DMR QFL+LLSDIGFVDKS+ NAYNQYS+D+EM+ A+LCAGL
Sbjct: 793 DFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSK-PNAYNQYSYDMEMISAVLCAGL 851
Query: 777 YPNVVQCKRRGKRTALYTKEVGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDST 836
YPNVVQCKRRGKRTA YTKE+GKVDIHP SVNA V++F LPYLVYSEKVKTTS+YIRDST
Sbjct: 852 YPNVVQCKRRGKRTAFYTKELGKVDIHPGSVNARVNLFSLPYLVYSEKVKTTSVYIRDST 911
Query: 837 NISDYALLLFGGNLVPSKSGDGIEMLGGYLHFSASKSVIELIKKLRGELDKLLNRKIVEP 896
NISDYALL+FGGNL+PSK+G+GIEMLGGYLHFSASK+++ELI++LRGE+DKLLN+KI +P
Sbjct: 912 NISDYALLMFGGNLIPSKTGEGIEMLGGYLHFSASKNILELIQRLRGEVDKLLNKKIEDP 971
Query: 897 GLDVSGEGKGVVAAAVELLHNQ 918
LD++ EGKGVV+A VELL +Q
Sbjct: 972 SLDITVEGKGVVSAVVELLRSQ 993
>AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr5:1428796-1434516 FORWARD LENGTH=1161
Length = 1161
Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/925 (45%), Positives = 578/925 (62%), Gaps = 24/925 (2%)
Query: 6 EQELIIKRYFSIGDQQTLADMAYKQGLYFHAYNKGKTLVVSKVPLPDYRADLDERHGTTQ 65
EQE++ + D + ++++A + GLY Y GK +V SKVPLP+YR DLD++ Q
Sbjct: 110 EQEIVSRDKRDRRDYEQISNLAKRMGLYSEIY--GKVVVASKVPLPNYRPDLDDKR--PQ 165
Query: 66 KEIRMSTDIERRVGNLLNSSQSMETETASLPSVSTDLGHKQSMSTTKSVSSQQTDXXXXX 125
+E+ + ++RRV LL + ++++ S + + Q T+ + + +D
Sbjct: 166 REVVLPLSLQRRVEGLLQ--EHLDSQQLSSGKANECVADSQPPKQTEELPDENSDSFLDG 223
Query: 126 XXXXXXXXXXXM---------QASDALKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSG 176
M Q S + M FR+ LP+FK K L+A+++NQV+VVSG
Sbjct: 224 SVMEKVLQRRSMRMRNMQRTWQESPEGRTMLEFRKTLPSFKDKERLLQAIARNQVIVVSG 283
Query: 177 ETGCGKTTQLPQFILEEEVSCLRGADCNIICTQPXXXXXXXXXXXXXXERGEILGETVGY 236
ETGCGKTTQLPQ+ILE E+ RGA CNIICTQP ERGE LGETVG+
Sbjct: 284 ETGCGKTTQLPQYILESEIESGRGAFCNIICTQPRRISAMAVSERVSAERGEPLGETVGF 343
Query: 237 HIRLETKRSAETRLLFCTTGVLLRQLVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXX 296
+RLE R T LLFCT+G+LLR+L+ D L GV+H+ VDEIHERGMNEDF
Sbjct: 344 KVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKEL 403
Query: 297 XXXXXXXXXXVMSATINADLFSNYFGNAPTIHIPGFTFPVAEHYLEDVLEKTRYTIKPEF 356
+MSAT+NA+LFSNY+G APTIHIPGFT PV H+LEDVLE T Y + F
Sbjct: 404 LPRRPDLRLVLMSATLNAELFSNYYGGAPTIHIPGFTHPVKAHFLEDVLEITGYKLT-SF 462
Query: 357 DNFEGNXXXXXXXXXXXXXP------LTEMFEDVDVDTHYKNYSLGVRKSLEAWSGSQID 410
+ + P +T + E+ +++++Y+ R SL +W I
Sbjct: 463 NQVDDYGQEKTWKTQKQLMPRKRKNQITTLVEEALSKSNFESYNSRTRDSLSSWMPDCIG 522
Query: 411 LGLVEASIEYICRNEGSGAILVFLTGWDEISKLLDKLKGNRLLGDPSKFLILPIHGSMPT 470
L+EA + +ICR E GA+LVFLTGWD+I L D++K + LLGDP++ L+L HGSM T
Sbjct: 523 FNLIEAVLCHICRKERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMAT 582
Query: 471 VNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSW 530
Q IF+R PPN RKIVLATN+AE+SITI+DVV+VVDCGKAKET+YDALN CLLPSW
Sbjct: 583 AEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSW 642
Query: 531 ISKASXXXXXXXXXXXXXXXCYRLYPKLIHDAMPEYQLAEILRTPLQELCLHIKSLQLGT 590
IS+AS CY LYPK ++DA EYQL E+LRTPL LCL IKSLQ+ +
Sbjct: 643 ISQASARQRRGRAGRLFPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIKSLQVES 702
Query: 591 VASFLEKALQPPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGS 650
+A FL ALQ P+SLAVQNAI LK IGALDEKE+LT LG+ L +P+DP +GKML+MG+
Sbjct: 703 IAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLGKMLIMGA 762
Query: 651 IFQCLNPALTIAAALAYRNPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAK 710
IF+C +P LTI + L+ R+PF+LP ++K+ A +AK F+ SDH+AL++AFEGWK+A+
Sbjct: 763 IFRCFDPILTIVSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYSDHMALVRAFEGWKDAE 822
Query: 711 RSGNEKDFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCA 770
R G+ +FCW NFLS TL+ I +R QF +L + G V N N+ SH+ +V A
Sbjct: 823 REGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALN--NKLSHNQSLVRA 880
Query: 771 ILCAGLYPNVVQCKRRGKRTALYTKEVGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSI 830
++C+GL+P + R + T + G+V ++ +SVN+ P P+LV+ EKVK ++
Sbjct: 881 VICSGLFPGIASVVHRETSMSFKTMDDGQVSLYANSVNSRFPTIPYPWLVFGEKVKVNAV 940
Query: 831 YIRDSTNISDYALLLFGGNLVPSKSGDGIEMLGGYLHFSASKSVIELIKKLRGELDKLLN 890
IRDST + D +L+LFGG+L ++ML GY+ F ++ E KL+ ELDKLL
Sbjct: 941 LIRDSTGVPDSSLILFGGSLSTGVQVGHLKMLDGYIDFFMDPNLAESYVKLKEELDKLLQ 1000
Query: 891 RKIVEPGLDVSGEGKGVVAAAVELL 915
+K+ +P +D+ EGK ++ A EL+
Sbjct: 1001 KKLEDPSMDIHKEGKYLMLAVQELV 1025
>AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr1:17989517-17995169 REVERSE LENGTH=1206
Length = 1206
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/907 (43%), Positives = 570/907 (62%), Gaps = 20/907 (2%)
Query: 6 EQELIIKRYFSIGDQQTLADMAYKQGLYFHAYNKGKTLVVSKVPLPDYRADLDERHGTTQ 65
+QE++ + D ++ +A + GL+ Y+K +V+SK PLP+YR DLD++ Q
Sbjct: 150 DQEVVSRERKDRRDFDHISALATRMGLHSRQYSK--IVVISKAPLPNYRPDLDDKR--PQ 205
Query: 66 KEI----RMSTDIERRVGNLLNSSQSMETETA---SLPSVSTDLGHKQSMSTTKSVSSQQ 118
+E+ + ++++ + + L+ +++ E S S++ G+ ++ T S +
Sbjct: 206 REVVLPFGLQSEVDAHLHSFLDQKKTLIPEMPRQNSSESLANGYGNYETPETVMQNSLAR 265
Query: 119 TDXXXXXXXXXXXXXXXXMQASDALKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGET 178
+ + + K M FR+ LPA+K K LKA++ NQV+VVSGET
Sbjct: 266 ERILRPRSLQLKSKQQQWVDSPEGQK-MVGFRKTLPAYKEKDALLKAIAANQVVVVSGET 324
Query: 179 GCGKTTQLPQFILEEEVSCLRGADCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHI 238
GCGKTTQLPQ+ILE E+ RGA C+IICTQP ERGE +GE+VGY +
Sbjct: 325 GCGKTTQLPQYILESEIEAARGATCSIICTQPRRISAISVSERVAAERGEQIGESVGYKV 384
Query: 239 RLETKRSAETRLLFCTTGVLLRQLVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXX 298
RLE R +TRLLFCTTGVLLR+L+ D L GV+H++VDEIHERGMNEDF
Sbjct: 385 RLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLP 444
Query: 299 XXXXXXXXVMSATINADLFSNYFGNAPTIHIPGFTFPVAEHYLEDVLEKTRY--TIKPEF 356
+MSAT+NA+LFS+YFG AP +HIPGFT+PV H+LED LE + Y T +
Sbjct: 445 RRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQI 504
Query: 357 DNF---EGNXXXXXXXXXXXXXPLTEMFEDVDVDTHYKNYSLGVRKSLEAWSGSQIDLGL 413
D++ + ++ ED +K Y+ R SL WS I L
Sbjct: 505 DDYGEEKTWKMQKQAQFKKRKSLISSAVEDALEAADFKGYNFRTRDSLSCWSPDSIGFNL 564
Query: 414 VEASIEYICRNEGSGAILVFLTGWDEISKLLDKLKGNRLLGDPSKFLILPIHGSMPTVNQ 473
+E + +I + E GA+LVF+TGWD+I+ L ++L+ + LLGDP+K L+L HGSM + Q
Sbjct: 565 IENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQ 624
Query: 474 CEIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISK 533
IFDRPP RKIVLATN+AE+SITI+DVVYV+DCGKAKETSYDALN CLLPSWISK
Sbjct: 625 RLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISK 684
Query: 534 ASXXXXXXXXXXXXXXXCYRLYPKLIHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVAS 593
A+ CY LYP+ +++A +YQ E+LRTPLQ LCL IKSL LG+++
Sbjct: 685 AAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISE 744
Query: 594 FLEKALQPPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQ 653
FL +ALQPP++L+VQNA+E LK IGALD+ E+LTPLG++L +P++P +GKML++G+IF
Sbjct: 745 FLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFN 804
Query: 654 CLNPALTIAAALAYRNPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSG 713
CL+P +T+ A L+ R+PF++P ++K+ A+ A+ F+G SDH+ L++A+ GWK+A+R+
Sbjct: 805 CLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTH 864
Query: 714 NEKDFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILC 773
+ D+CW+NFLS TL+ +D MR QF NLL + +D G ++ SHD +V AI+C
Sbjct: 865 SGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGC---SKLSHDEHLVRAIIC 921
Query: 774 AGLYPNVVQCKRRGKRTALYTKEVGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIR 833
AG++P V + K L T E G+V ++ SSVN V + P P+LV+++KVK S+++R
Sbjct: 922 AGMFPGVCSVVNKEKSITLKTMEDGQVLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLR 981
Query: 834 DSTNISDYALLLFGGNLVPSKSGDGIEMLGGYLHFSASKSVIELIKKLRGELDKLLNRKI 893
DST +SD LLLFG + ++MLGGYL F ++ L+ ELD+L+ K+
Sbjct: 982 DSTAVSDSVLLLFGDKISSGGFDGHLKMLGGYLEFFMKPTLAYTYLSLKRELDELIQNKL 1041
Query: 894 VEPGLDV 900
V P LD+
Sbjct: 1042 VNPKLDI 1048
>AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family protein |
chr1:17989670-17995169 REVERSE LENGTH=1197
Length = 1197
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/907 (43%), Positives = 570/907 (62%), Gaps = 20/907 (2%)
Query: 6 EQELIIKRYFSIGDQQTLADMAYKQGLYFHAYNKGKTLVVSKVPLPDYRADLDERHGTTQ 65
+QE++ + D ++ +A + GL+ Y+K +V+SK PLP+YR DLD++ Q
Sbjct: 150 DQEVVSRERKDRRDFDHISALATRMGLHSRQYSK--IVVISKAPLPNYRPDLDDKR--PQ 205
Query: 66 KEI----RMSTDIERRVGNLLNSSQSMETETA---SLPSVSTDLGHKQSMSTTKSVSSQQ 118
+E+ + ++++ + + L+ +++ E S S++ G+ ++ T S +
Sbjct: 206 REVVLPFGLQSEVDAHLHSFLDQKKTLIPEMPRQNSSESLANGYGNYETPETVMQNSLAR 265
Query: 119 TDXXXXXXXXXXXXXXXXMQASDALKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGET 178
+ + + K M FR+ LPA+K K LKA++ NQV+VVSGET
Sbjct: 266 ERILRPRSLQLKSKQQQWVDSPEGQK-MVGFRKTLPAYKEKDALLKAIAANQVVVVSGET 324
Query: 179 GCGKTTQLPQFILEEEVSCLRGADCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHI 238
GCGKTTQLPQ+ILE E+ RGA C+IICTQP ERGE +GE+VGY +
Sbjct: 325 GCGKTTQLPQYILESEIEAARGATCSIICTQPRRISAISVSERVAAERGEQIGESVGYKV 384
Query: 239 RLETKRSAETRLLFCTTGVLLRQLVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXX 298
RLE R +TRLLFCTTGVLLR+L+ D L GV+H++VDEIHERGMNEDF
Sbjct: 385 RLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLP 444
Query: 299 XXXXXXXXVMSATINADLFSNYFGNAPTIHIPGFTFPVAEHYLEDVLEKTRY--TIKPEF 356
+MSAT+NA+LFS+YFG AP +HIPGFT+PV H+LED LE + Y T +
Sbjct: 445 RRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQI 504
Query: 357 DNF---EGNXXXXXXXXXXXXXPLTEMFEDVDVDTHYKNYSLGVRKSLEAWSGSQIDLGL 413
D++ + ++ ED +K Y+ R SL WS I L
Sbjct: 505 DDYGEEKTWKMQKQAQFKKRKSLISSAVEDALEAADFKGYNFRTRDSLSCWSPDSIGFNL 564
Query: 414 VEASIEYICRNEGSGAILVFLTGWDEISKLLDKLKGNRLLGDPSKFLILPIHGSMPTVNQ 473
+E + +I + E GA+LVF+TGWD+I+ L ++L+ + LLGDP+K L+L HGSM + Q
Sbjct: 565 IENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQ 624
Query: 474 CEIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISK 533
IFDRPP RKIVLATN+AE+SITI+DVVYV+DCGKAKETSYDALN CLLPSWISK
Sbjct: 625 RLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISK 684
Query: 534 ASXXXXXXXXXXXXXXXCYRLYPKLIHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVAS 593
A+ CY LYP+ +++A +YQ E+LRTPLQ LCL IKSL LG+++
Sbjct: 685 AAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISE 744
Query: 594 FLEKALQPPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQ 653
FL +ALQPP++L+VQNA+E LK IGALD+ E+LTPLG++L +P++P +GKML++G+IF
Sbjct: 745 FLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFN 804
Query: 654 CLNPALTIAAALAYRNPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSG 713
CL+P +T+ A L+ R+PF++P ++K+ A+ A+ F+G SDH+ L++A+ GWK+A+R+
Sbjct: 805 CLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTH 864
Query: 714 NEKDFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILC 773
+ D+CW+NFLS TL+ +D MR QF NLL + +D G ++ SHD +V AI+C
Sbjct: 865 SGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGC---SKLSHDEHLVRAIIC 921
Query: 774 AGLYPNVVQCKRRGKRTALYTKEVGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIR 833
AG++P V + K L T E G+V ++ SSVN V + P P+LV+++KVK S+++R
Sbjct: 922 AGMFPGVCSVVNKEKSITLKTMEDGQVLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLR 981
Query: 834 DSTNISDYALLLFGGNLVPSKSGDGIEMLGGYLHFSASKSVIELIKKLRGELDKLLNRKI 893
DST +SD LLLFG + ++MLGGYL F ++ L+ ELD+L+ K+
Sbjct: 982 DSTAVSDSVLLLFGDKISSGGFDGHLKMLGGYLEFFMKPTLAYTYLSLKRELDELIQNKL 1041
Query: 894 VEPGLDV 900
V P LD+
Sbjct: 1042 VNPKLDI 1048
>AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:88847-94635 REVERSE LENGTH=1113
Length = 1113
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/918 (44%), Positives = 557/918 (60%), Gaps = 17/918 (1%)
Query: 6 EQELIIKRYFSIGDQQTLADMAYKQGLYFHAYNKGKTLVVSKVPLPDYRADLDERHGTTQ 65
+QE+I + D LA +A GLY HAY K +V SK+PLP+YR DLD++ Q
Sbjct: 73 KQEVISREKKDRRDFDKLAALATTLGLYSHAY--AKVVVFSKIPLPNYRFDLDDKK--PQ 128
Query: 66 KEIRMSTDIERRVGNLLNSSQSMETETASLPSVSTDLGHKQSMSTTKSVSSQ----QTDX 121
+E+ + TD+ +RV L S + ++ ST + S Q
Sbjct: 129 REVNLHTDLLQRVEAYLTEYLSKSSNRIDRVPANSVSRTSSISSTDEWFSEQPLPISATK 188
Query: 122 XXXXXXXXXXXXXXXMQASDALKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCG 181
QAS + M R LPAFK + L A+S+NQV+V+SGETGCG
Sbjct: 189 ILWQRSLQLRDRQQYWQASVEGQRMLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCG 248
Query: 182 KTTQLPQFILEEEVSCLRGADCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLE 241
KTTQ+PQFILE E+ RGA +IICTQP ERGE LGE+VGY +RLE
Sbjct: 249 KTTQIPQFILESEIEANRGAFSSIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLE 308
Query: 242 TKRSAETRLLFCTTGVLLRQLVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXX 301
+ +TRLLFCTTG+LLR+L+ D L GV+H++VDEIHERGMNEDF
Sbjct: 309 GVKGRDTRLLFCTTGILLRRLLVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRS 368
Query: 302 XXXXXVMSATINADLFSNYFGNAPTIHIPGFTFPVAEHYLEDVLEKTRYTIKP--EFDNF 359
+MSAT++A+LFS+YFG A I+IPGFT+PV H+LED+LE TRY + P + D++
Sbjct: 369 ELKLILMSATLDAELFSSYFGGAGVIYIPGFTYPVRSHFLEDILEMTRYRLTPYNQIDDY 428
Query: 360 --EGNXXXXXXXXXXXXXPLTEMFEDVDVDTHYKNYSLGVRKSLEAWSGSQIDLGLVEAS 417
E +T + ED +K +S R+SL W I L+E
Sbjct: 429 GQERTWKMNKQIPKKRKSQITFVVEDALRAADFKEFSPETRESLSCWYPDCIGFNLIEFL 488
Query: 418 IEYICRNEGSGAILVFLTGWDEISKLLDKLKGNRLLGDPSKFLILPIHGSMPTVNQCEIF 477
+ IC NEG G IL+FLTGWD+IS L +KL+ + + G+P ++L HGSM T Q IF
Sbjct: 489 LCNICENEGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIF 548
Query: 478 DRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXX 537
+ P RKIVLATNIAE+SITI+DV +V+DCGKAKETSYDALN CLLPSWISK S
Sbjct: 549 EEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQ 608
Query: 538 XXXXXXXXXXXXXCYRLYPKLIHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEK 597
CY LYPK ++DA EYQL EILRTPL LCL IKSL LG+++ FL +
Sbjct: 609 QRRGRAGRVRPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFLSR 668
Query: 598 ALQPPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNP 657
ALQ P+ LAVQ AI LK IGALDE EDLT LG++L +P++P +GKML++G+I CL+P
Sbjct: 669 ALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDP 728
Query: 658 ALTIAAALAYRNPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKD 717
LT+AA L+ R+PF+ P ++K+ A+AAK F+ D SDH+AL++A+EGWK+A+ D
Sbjct: 729 ILTVAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDH-SDHLALVRAYEGWKKAEEESAVYD 787
Query: 718 FCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLY 777
+CW+NFLS +LR ID +R +F +LL D G +D + + N +D + A++C G+Y
Sbjct: 788 YCWKNFLSIQSLRAIDSLRKEFFSLLKDTGLIDGN--PSICNSEGNDANLTRAVICYGMY 845
Query: 778 PNVVQCKRRGKRTALYTKEVGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTN 837
P + + +L T E G+V ++ +S NA P P+LV++EK+K S+++RDST
Sbjct: 846 PGICSVVHNERSFSLKTMEDGQVLLYSNSENARETKIPYPWLVFNEKIKVNSVFLRDSTA 905
Query: 838 ISDYALLLFGGNLVPSKSGDGIEMLGGYLHFSASKSVIELIKKLRGELDKLLNRKIVEPG 897
SD L+LFGG++ + ++MLGGYL F V E+ + L+ ELD+L+ K++ P
Sbjct: 906 CSDSTLILFGGSISKGDTDGHLKMLGGYLEFFMKPDVAEIYQTLKKELDELIQNKLLNPK 965
Query: 898 LDVSGEGKGVVAAAVELL 915
+D+ + + +A+ LL
Sbjct: 966 VDMQAHRE--LLSAIRLL 981
>AT1G58060.1 | Symbols: | RNA helicase family protein |
chr1:21489480-21501775 REVERSE LENGTH=1459
Length = 1459
Score = 514 bits (1323), Expect = e-145, Method: Compositional matrix adjust.
Identities = 323/911 (35%), Positives = 466/911 (51%), Gaps = 104/911 (11%)
Query: 94 SLPSVSTDLGHKQSMSTTKSVSSQQTDXXXXXXXXXXXXXXXXMQASDALKEMKSFREKL 153
SLP V + + K + KS + + D + + K+M R L
Sbjct: 555 SLPLVDSYVKDKDDLGVVKSNNRAKRDSYIEAECLSLQRKQENKKRTQKYKDMLKTRTAL 614
Query: 154 PAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADCNIICTQPXXX 213
P ++K+ L+ + + VLVV GETG GKTTQ+PQFIL++ + G CNIICTQP
Sbjct: 615 PISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQPRRI 674
Query: 214 XXXXXXXXXXXERGE----ILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLVQDPELT 269
ER E + VGY +RLE+ RS +TRLLFCTTG+LLR+L D L
Sbjct: 675 AAISVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGDRTLN 734
Query: 270 GVSHLLVDEIHERGMNEDF------XXXXXXXXXXXXXXXXXXVMSATINADLFSNYFGN 323
V+H++VDE+HER + DF +MSAT++ADLFS YFG+
Sbjct: 735 DVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFSRYFGH 794
Query: 324 APTIHIPGFTFPVAEHYLEDVLEKTRYTIKPE-----------------FDNFEGNXXXX 366
P I G T PV H+LE++ E Y + P+ ++ G
Sbjct: 795 CPVITAQGRTHPVTTHFLEEIYESINYLLAPDSPAALRSDTSIKDKLGSVNDRRGKKNLV 854
Query: 367 XXXXXXXXXPLTEMFEDVDVDTHYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEG 426
+ V ++Y +YS +++L+ + +ID L+E I +I
Sbjct: 855 LAGWGDDYLLSEDCLNPFYVSSNYNSYSDQTQQNLKRLNEDRIDYELLEELICHIDDTCE 914
Query: 427 SGAILVFLTGWDEISKLLDKLKGNRLLGDPSKFLILPIHGSMPTVNQCEIFDRPPPNKRK 486
GAIL+FL G EI LLD L + P+ +LP+H S+ + Q ++F RPP RK
Sbjct: 915 EGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLPLHSSIASSEQRKVFLRPPKGLRK 974
Query: 487 IVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXX 546
++ ATNIAE+SITIDDVVYV+D GK KE Y+ KL+ ++ WIS+A+
Sbjct: 975 VIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRV 1034
Query: 547 XXXXCYRLYPKL-IHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSL 605
C+ LY + M YQ+ E+LR PL ELCL IK L LG + FL +AL+PP
Sbjct: 1035 KPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKPFLSRALEPPSEG 1094
Query: 606 AVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAAL 665
A+ +AI LL +GA++ E+LTPLG HL +P+D IGKMLL G IF CL+P L+IAA L
Sbjct: 1095 AMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFL 1154
Query: 666 AYRNPFVLPINRKEEADAAKRSFAGDSC------------SDHIALLKAFEGW------- 706
+Y++PF+ P + K+ D K + D+ SDH+ ++ A++ W
Sbjct: 1155 SYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQSDHLLMMVAYDKWVKILQER 1214
Query: 707 --KEAKRSGNEKDFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDK------------- 751
K A+R FC FLS + +R+I DMR+QF LL+DIG ++
Sbjct: 1215 GMKAAQR------FCESKFLSSSVMRMIRDMRVQFGTLLADIGLINLPKTGEFSGRKKEN 1268
Query: 752 -----SRGANAYNQYSHDLEMVCAILCAGLYPNVV------------QCKRRGKRTALYT 794
S +N YS E+V AILCAGLYPN+ ++G +T Y+
Sbjct: 1269 LDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITETTFNSLTKQGNQTKSYS 1328
Query: 795 KEVG---KVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNISDYALLLFGGNL- 850
+V IHPSS+N+ F P+LV+ EKV+T +Y+RD+T +S +++LLFGG++
Sbjct: 1329 AWYDGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRDTTIVSPFSILLFGGSIN 1388
Query: 851 VPSKSGDGIEMLGGYLHFSASKSVIELIKKLRGELDKLLNRKIVEPGLDVSGEGKGVVAA 910
V +SG + G+L +A L K+LR L +L I +P E G+V
Sbjct: 1389 VHHQSGS--VTIDGWLKVAAPAQTAVLFKELRLTLHSILKDLIRKP------EKSGIV-- 1438
Query: 911 AVELLHNQMIR 921
HN++++
Sbjct: 1439 -----HNEVVK 1444
>AT1G58050.1 | Symbols: | RNA helicase family protein |
chr1:21478590-21487839 REVERSE LENGTH=1417
Length = 1417
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 299/847 (35%), Positives = 437/847 (51%), Gaps = 101/847 (11%)
Query: 144 KEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADC 203
K+M R LP ++K + L+ + + VLVV GETG GKTTQ+PQFIL++ + G C
Sbjct: 588 KDMLKTRAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYC 647
Query: 204 NIICTQPXXXXXXXXXXXXXXERGE----ILGETVGYHIRLETKRSAETRLLFCTTGVLL 259
NIICTQP ER E V Y +R + RS +TRLLFCTTG+LL
Sbjct: 648 NIICTQPRAITVAQRVAD---ERCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILL 704
Query: 260 RQLVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXX------XXXXXVMSATIN 313
R+LV D L V+H++VDE+HER + DF +MSAT++
Sbjct: 705 RKLVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVD 764
Query: 314 ADLFSNYFGNAPTIHIPGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXXXXXXXXX 373
A FS YFG P I G T PV ++LED+ E+T+Y + +
Sbjct: 765 AHQFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLLASD-----------SPAALSS 813
Query: 374 XXPLTEMFEDVDVDTHYKNYSLG---------------VRKSLEAWSGSQIDLGLVEASI 418
+T+ V+V KN L S++ + + +D L+E I
Sbjct: 814 DTSITDKLGSVNVPRGKKNLMLAGWGDSYLVSEDSLNTSYDSIKYIASAVVDYDLLEELI 873
Query: 419 EYICRNEGSGAILVFLTGWDEISKLLDKLKGNRLLGDPSKFLILPIHGSMPTVNQCEIFD 478
+I GAILVFL G EI+ LL++L + S +LP+H S+ + Q ++F
Sbjct: 874 CHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSSIASTEQKKVFL 933
Query: 479 RPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXX 538
RPP RK+++ATNIAE+SITI+DVVYV+D GK KE Y+ KL+ ++ W+SKA+
Sbjct: 934 RPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQ 993
Query: 539 XXXXXXXXXXXXCYRLYPK-LIHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEK 597
C+ LY + M YQ+ E+LR PL ELCLHIK L LG + FL K
Sbjct: 994 RMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFLSK 1053
Query: 598 ALQPPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNP 657
AL+PP A+ +AI LL +GAL+ E+LTPLG HL +P+D IGKMLL G IF CL+P
Sbjct: 1054 ALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSP 1113
Query: 658 ALTIAAALA-YRNPFVLPINRKEEADAAKRSFA--------------GDSCSDHIALLKA 702
L+IAA L+ ++PFV K+E + + A D SDH+ ++ A
Sbjct: 1114 ILSIAAFLSCCKSPFVYA---KDEQNVDRVKLALLSDKLESSSNLNNNDRQSDHLLMVVA 1170
Query: 703 FEGWKEAKRSGNEK---DFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRG----- 754
+E W K FC FL+ + +R++ + R++F LL+DIG ++ +G
Sbjct: 1171 YEKWVRILHEQGFKAAESFCESKFLNSSVMRMMRERRVEFGMLLADIGLINLPKGKGRRK 1230
Query: 755 ----------ANAYNQYSHDLEMVCAILCAGLYPNVVQC--------KRRGKRTALYTKE 796
+N YS + E+V AILCAGL PN+ + +R A++
Sbjct: 1231 ENFDVWFSDKTQPFNMYSQEPEVVKAILCAGLCPNIAEGLVNRLTKPAEETQRYAVWHDG 1290
Query: 797 VGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTS-IYIRDSTNISDYALLLFGGNL-VPSK 854
+V IH +S+N F P++V+ EK++T +Y++D+T +S +++LLFGG++ V +
Sbjct: 1291 KREVHIHRNSINKNCKAFQYPFIVFLEKLETKKVVYLQDTTVVSPFSILLFGGSINVHHQ 1350
Query: 855 SGDGIEMLGGYLHFSASKSVIELIKKLRGELDKLLNRKIVEPGLDVSGEGKGVVAAAVEL 914
SG + G+L +A L K+LR L +L I +P E G+V
Sbjct: 1351 SGSV--TIDGWLKLTAPAQTAVLFKELRLTLHSILKDLIRKP------EKSGIV------ 1396
Query: 915 LHNQMIR 921
HN++++
Sbjct: 1397 -HNEVVK 1402
>AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1034
Length = 1034
Score = 311 bits (797), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 223/702 (31%), Positives = 341/702 (48%), Gaps = 90/702 (12%)
Query: 142 ALKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGA 201
AL+E++ R LP + + + LKAV ++QVLV+ G+TG GKTTQ+PQ+ L E RG
Sbjct: 383 ALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQY-LHEAGYTKRG- 440
Query: 202 DCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQ 261
+ CTQP E G LG VGY IR E S +T L + T G+LLR+
Sbjct: 441 --KVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRE 498
Query: 262 LVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYF 321
L+ +P+L S ++VDE HER ++ D + SAT++A+ FS+YF
Sbjct: 499 LLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYF 558
Query: 322 GNAPTIHIPGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXXXXXXXXXXXPLTEMF 381
AP PG +PV + YT PE D
Sbjct: 559 DTAPIFSFPGRRYPV----------EINYTSAPEAD------------------------ 584
Query: 382 EDVDVDTHYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEIS 441
+D +V +I I E G ILVF TG +EI
Sbjct: 585 --------------------------YMDAAIV--TILTIHVREPLGDILVFFTGQEEIE 616
Query: 442 KLLDKLKGNRLLGDPSK---FLILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSI 498
+ LK +R+ G +K +I PI+ ++P+ Q +IF+ P RK+VLATNIAE+S+
Sbjct: 617 TAEEILK-HRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSL 675
Query: 499 TIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPKL 558
TID + YVVD G +K SY+ + LL + ISKAS CYRLY
Sbjct: 676 TIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAF 735
Query: 559 -IHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTI 617
++ + E + E+ RT L + L +KSL + + +F + PP + A+ ++ELL +
Sbjct: 736 NYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINF--DFMDPPPAEALVKSLELLFAL 793
Query: 618 GALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNP-FVLPIN 676
GAL++ +LT G+ + PLDP + KM+++ ++C + ++IAA L+ F P +
Sbjct: 794 GALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKD 853
Query: 677 RKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMR 736
++ AD A+ +F + DHIALLK + WKE S +C+EN++ +++ D+R
Sbjct: 854 KQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQ---WCYENYIQVRSMKRARDIR 910
Query: 737 MQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKE 796
Q LL + +D S N +L+ V + AG +P+ + ++ G + K
Sbjct: 911 DQLEGLLERVE-IDISSNLN-------ELDSVRKSIVAGFFPHTAKLQKNGSYRTV--KH 960
Query: 797 VGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNI 838
V IHP N+G+ ++VY E V T+ Y+R T +
Sbjct: 961 PQTVHIHP---NSGLSQVLPRWVVYHELVLTSKEYMRQVTEL 999
>AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1044
Length = 1044
Score = 311 bits (796), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 223/702 (31%), Positives = 341/702 (48%), Gaps = 90/702 (12%)
Query: 142 ALKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGA 201
AL+E++ R LP + + + LKAV ++QVLV+ G+TG GKTTQ+PQ+ L E RG
Sbjct: 393 ALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQY-LHEAGYTKRG- 450
Query: 202 DCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQ 261
+ CTQP E G LG VGY IR E S +T L + T G+LLR+
Sbjct: 451 --KVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRE 508
Query: 262 LVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYF 321
L+ +P+L S ++VDE HER ++ D + SAT++A+ FS+YF
Sbjct: 509 LLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYF 568
Query: 322 GNAPTIHIPGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXXXXXXXXXXXPLTEMF 381
AP PG +PV + YT PE D
Sbjct: 569 DTAPIFSFPGRRYPV----------EINYTSAPEAD------------------------ 594
Query: 382 EDVDVDTHYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEIS 441
+D +V +I I E G ILVF TG +EI
Sbjct: 595 --------------------------YMDAAIV--TILTIHVREPLGDILVFFTGQEEIE 626
Query: 442 KLLDKLKGNRLLGDPSK---FLILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSI 498
+ LK +R+ G +K +I PI+ ++P+ Q +IF+ P RK+VLATNIAE+S+
Sbjct: 627 TAEEILK-HRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSL 685
Query: 499 TIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPKL 558
TID + YVVD G +K SY+ + LL + ISKAS CYRLY
Sbjct: 686 TIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAF 745
Query: 559 -IHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTI 617
++ + E + E+ RT L + L +KSL + + +F + PP + A+ ++ELL +
Sbjct: 746 NYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINF--DFMDPPPAEALVKSLELLFAL 803
Query: 618 GALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNP-FVLPIN 676
GAL++ +LT G+ + PLDP + KM+++ ++C + ++IAA L+ F P +
Sbjct: 804 GALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKD 863
Query: 677 RKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMR 736
++ AD A+ +F + DHIALLK + WKE S +C+EN++ +++ D+R
Sbjct: 864 KQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQ---WCYENYIQVRSMKRARDIR 920
Query: 737 MQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKE 796
Q LL + +D S N +L+ V + AG +P+ + ++ G + K
Sbjct: 921 DQLEGLLERVE-IDISSNLN-------ELDSVRKSIVAGFFPHTAKLQKNGSYRTV--KH 970
Query: 797 VGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNI 838
V IHP N+G+ ++VY E V T+ Y+R T +
Sbjct: 971 PQTVHIHP---NSGLSQVLPRWVVYHELVLTSKEYMRQVTEL 1009
>AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissue
and tapetum | chr2:13120585-13126635 REVERSE LENGTH=1299
Length = 1299
Score = 305 bits (781), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 176/460 (38%), Positives = 262/460 (56%), Gaps = 13/460 (2%)
Query: 408 QIDLGLVEASIEYICRNEGSGAILVFLTGWDEISKLLDKLKGNRLLGDPSKFLILPIHGS 467
Q+D+ L++ + IC + GAILVFL GWD+I+K +L N D +KF I+ +H
Sbjct: 532 QVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSM 591
Query: 468 MPTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 527
+P Q ++F+RPPP RKIVLATNIAES++TIDDVVYV+D G+ KE SYD N ++ L
Sbjct: 592 VPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQ 651
Query: 528 PSWISKASXXXXXXXXXXXXXXXCYRLYPKLIHDAMPEYQLAEILRTPLQELCLHIKSLQ 587
SW+SKA+ CY LY +L +MP++++ EI R P++ELCL +K L
Sbjct: 652 SSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILD 711
Query: 588 LGTVAS-FLEKALQPPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKML 646
+ FL+K L PP ++ NA+ +L+ IGAL +E+LT LG+ +P+ P I KML
Sbjct: 712 PNCKTNDFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKML 771
Query: 647 LMGSIFQCLNPALTIAAALAYRNPFVLPINRKEEADAAKRSFAGDS-C---SDHIALLKA 702
+ CL+PALT+A A Y+ PF +P++ E AA S C SDH+A++ A
Sbjct: 772 FFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCGGDSDHLAVVAA 831
Query: 703 FEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQYS 762
FE WK AK G +FC + F+SP+ ++++D MR Q + L G + ++ +Q S
Sbjct: 832 FECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPND--ISSCSQNS 889
Query: 763 HDLEMVCAILCAGLYPNVVQ-CKRRG--KRTALYTKEVGKVDIH--PSSVNAGVHIFPLP 817
D ++ A+L GLYP V + C G +RT + T KV +H ++ N +
Sbjct: 890 RDPGILRAVLAVGLYPMVGRLCPAFGNNRRTIVETASGAKVRVHSLSNNFNLSSKKYDES 949
Query: 818 YLVYSEKVK-TTSIYIRDSTNISDYALLLFGGNLVPSKSG 856
LV+ E + ++IR+ T D LLL + + +G
Sbjct: 950 LLVFDEITRGDGGMHIRNCTVARDLPLLLISTEIAVAPTG 989
Score = 179 bits (455), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 122/212 (57%), Gaps = 4/212 (1%)
Query: 137 MQASDALKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVS 196
++ ALKE+ R KLP K AV NQV+++SGETGCGKTTQ+PQ++L+ S
Sbjct: 171 LKKDKALKEITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWS 230
Query: 197 CLRGADCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTG 256
R C I+CTQP ERGE +GE +GY +RL++K + ++FCT G
Sbjct: 231 SKRET-CKIVCTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNG 289
Query: 257 VLLRQLVQDPELTGVS---HLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATIN 313
+LLR LV ++ VS H++VDEIHER DF +MSAT++
Sbjct: 290 ILLRVLVGKGSVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLD 349
Query: 314 ADLFSNYFGNAPTIHIPGFTFPVAEHYLEDVL 345
A+ FS YFG P + +PGFT+PV YLEDVL
Sbjct: 350 AERFSGYFGGCPVVRVPGFTYPVRTLYLEDVL 381
>AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase |
chr1:2040567-2047333 FORWARD LENGTH=1576
Length = 1576
Score = 302 bits (773), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 170/451 (37%), Positives = 260/451 (57%), Gaps = 15/451 (3%)
Query: 408 QIDLGLVEASIEYICRNEGSGAILVFLTGWDEISKLLDKLKGNRLLGDPSKFLILPIHGS 467
++D+GL+ ++ IC + GAILVFL GW+EISK +KL +R +KF+IL +H
Sbjct: 556 EVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSR 615
Query: 468 MPTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLL 527
+P Q ++F+RPP RKIVLATNIAES++TIDDVVYV+D G+ KE SYD N ++ L
Sbjct: 616 VPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQ 675
Query: 528 PSWISKASXXXXXXXXXXXXXXXCYRLYPKLIHDAMPEYQLAEILRTPLQELCLHIKSLQ 587
SW+SKA+ CY LY KL ++PEY++ E++R P+ ELCL +K L
Sbjct: 676 SSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLD 735
Query: 588 LG-TVASFLEKALQPPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKML 646
V FL+K + PP + +++NA+ +LK IGAL +E+LT LGQ +P+ P I KM+
Sbjct: 736 PNCNVNDFLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRISKMI 795
Query: 647 LMGSIFQCLNPALTIAAALAYRNPFVLPIN--RKEEADAAKRSFA---GDSCSDHIALLK 701
+ CL+PAL +A A ++PF +P++ +++A AAK A GD SDH+A +
Sbjct: 796 YFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDH-SDHLATVA 854
Query: 702 AFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQY 761
AF+ WK AK SG K+FC + F+S ++ +DD+ + L+ G + S + N
Sbjct: 855 AFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPSSSSNCSLN-- 912
Query: 762 SHDLEMVCAILCAGLYPNVVQ-CKRRGKRTALYTKEVGKVDIHPSSVNAGVHI----FPL 816
+HD ++ A++ GLYP + + C RT + + + S++ V + F
Sbjct: 913 AHDPGILRAVIAVGLYPMLGRMCPLSKNRTRSVIETIAGAKVRVPSLSNNVDMSSTKFDE 972
Query: 817 PYLVYSEKVKTT-SIYIRDSTNISDYALLLF 846
+V+ E + + IR T + +LLF
Sbjct: 973 ALIVFDEITRGDWGVVIRSCTVLPTIPVLLF 1003
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 123/215 (57%), Gaps = 10/215 (4%)
Query: 140 SDALKEMKSFRE------KLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEE 193
S LK+ + FRE KLP + + AV NQV++++GETGCGKTTQ+PQ++L+
Sbjct: 198 SSRLKKERHFREIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDH 257
Query: 194 EVSCLRGADCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFC 253
+ A C IICTQP ERGE +G TVGY +RL+++ E+ ++FC
Sbjct: 258 MWHSKKEA-CKIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFC 316
Query: 254 TTGVLLRQLVQ---DPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSA 310
T G+LLR L+ + + ++H++VDEIHER DF +MSA
Sbjct: 317 TNGILLRVLIGKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSA 376
Query: 311 TINADLFSNYFGNAPTIHIPGFTFPVAEHYLEDVL 345
T++A+ FS YFG P + +PGFT+PV +L+D L
Sbjct: 377 TLDAERFSEYFGGCPVVRVPGFTYPVRTFFLDDAL 411
>AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |
chr3:9750122-9753719 REVERSE LENGTH=1168
Length = 1168
Score = 302 bits (773), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 227/694 (32%), Positives = 330/694 (47%), Gaps = 92/694 (13%)
Query: 150 REKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADCNIICTQ 209
RE LP +K+K E ++AV NQVLVV GETG GKTTQ+ Q++ E + I CTQ
Sbjct: 512 RESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT----KGKIGCTQ 567
Query: 210 PXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLVQDPELT 269
P E G LGE VGY IR E +T + + T G+LLR+++ D L+
Sbjct: 568 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLS 627
Query: 270 GVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYFGNAPTIHI 329
S +++DE HER ++ D V SAT++A+ FS YF N I
Sbjct: 628 QYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFNCNIFTI 687
Query: 330 PGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXXXXXXXXXXXPLTEMFEDVDVDTH 389
PG TFPV ++L YT +PE D
Sbjct: 688 PGRTFPV------EIL----YTKQPETD-------------------------------- 705
Query: 390 YKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEI----SKLLD 445
+D L+ ++ I E G ILVFLTG +EI L +
Sbjct: 706 ------------------YLDAALI--TVLQIHLTEPEGDILVFLTGQEEIDSACQSLYE 745
Query: 446 KLKGNRLLGDPSKFLILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVY 505
++KG L + + +ILP++ ++P+ Q IFD PPP KRK+V+ATNIAE+S+TID + Y
Sbjct: 746 RMKG--LGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYY 803
Query: 506 VVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPKLIH-DAMP 564
VVD G AK+ Y+ L L+ + IS+AS CYRLY + + + MP
Sbjct: 804 VVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMP 863
Query: 565 EYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTIGALDEKE 624
+ EI R L L +K++ + + SF + PP A+ +A+E L ++GALDE+
Sbjct: 864 PTSIPEIQRINLGMTTLTMKAMGINDLLSF--DFMDPPQPQALISAMEQLYSLGALDEEG 921
Query: 625 DLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPINRKEEADAA 684
LT LG+ + PL+P + KMLL C + LT+ A + N F P ++ +AD
Sbjct: 922 LLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQK 981
Query: 685 KRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMRMQFLNLLS 744
+ F DH+ LL +E WK SG +C+ENF+ +LR D+R Q L+++
Sbjct: 982 RAKFFQPE-GDHLTLLAVYEAWKAKNFSG---PWCFENFIQSRSLRRAQDVRKQLLSIMD 1037
Query: 745 DIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKEVGKVDIHP 804
+ G N ++ AI + + + G RT + E V IHP
Sbjct: 1038 KYKLDVVTAGKNF-------TKIRKAITAGFFFHGARKDPQEGYRTLV---ENQPVYIHP 1087
Query: 805 SSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNI 838
SS A P +++Y + V TT Y+R+ T I
Sbjct: 1088 SS--ALFQRQP-DWVIYHDLVMTTKEYMREVTVI 1118
>AT2G47250.1 | Symbols: | RNA helicase family protein |
chr2:19399923-19402981 REVERSE LENGTH=729
Length = 729
Score = 291 bits (744), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 228/757 (30%), Positives = 351/757 (46%), Gaps = 103/757 (13%)
Query: 150 REKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVS--CLRGADCNIIC 207
R LP + K +FL ++ NQ L++ GETG GKTTQ+PQF+L+ V+ +G + C
Sbjct: 62 RRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGC 121
Query: 208 TQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLVQDPE 267
TQP E +GE VGY IR E S+ T L + T G+LLR+ + DP
Sbjct: 122 TQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPL 181
Query: 268 LTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYFGNAPTI 327
L +++DE HER + D VMSAT+ A+ F YF AP +
Sbjct: 182 LERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLM 241
Query: 328 HIPGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXXXXXXXXXXXPLTEMFEDVDVD 387
+PG PV + YT +PE D E
Sbjct: 242 KVPGRLHPV----------EIFYTQEPERDYLEA-------------------------- 265
Query: 388 THYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEISKLLDKL 447
+R ++ ++C E G ILVFLTG +EI K+
Sbjct: 266 --------AIRTVVQI----------------HMC--EPPGDILVFLTGEEEIEDACRKI 299
Query: 448 -KGNRLLGD---PSKFLILPIHGSMPTVNQCEIFDRPP-------PNKRKIVLATNIAES 496
K LGD P K ++P++ ++P Q +IFD P P RKIV++TNIAE+
Sbjct: 300 NKEVSNLGDQVGPVK--VVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAET 357
Query: 497 SITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYP 556
S+TID +VYV+D G AK+ Y+ ++ LL S ISKAS C+RLY
Sbjct: 358 SLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYT 417
Query: 557 -KLIHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLK 615
K ++ + EILR+ L L +K L + + F + PP + A+E+L
Sbjct: 418 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEVLN 475
Query: 616 TIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPI 675
+GALD++ +LT G+ + PLDP + KML++ F C N L+++A L+ N FV P
Sbjct: 476 YLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPR 535
Query: 676 NRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDM 735
++ AD AK F G DH+ LL + +K+ + + ++C+ENF++ ++ D++
Sbjct: 536 EAQKAADEAKARF-GHIDGDHLTLLNVYHAYKQ---NNEDPNWCFENFVNNRAMKSADNV 591
Query: 736 RMQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTK 795
R Q + ++S S N+ + Y + + + AG + V +R G +
Sbjct: 592 RQQLVRIMSRFNLKMCSTDFNSRDYYVN----IRKAMLAGYFMQVAHLERTGHYLTVKDN 647
Query: 796 EVGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNISDYALLLFGGNLVPSKS 855
+V V +HPS N H +++Y+E V TT +IR T+I L+ +
Sbjct: 648 QV--VHLHPS--NCLDH--KPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYD--- 698
Query: 856 GDGIEMLGGYLHFSASKSVIELIKKLRGELDKLLNRK 892
L + + A +++ +L KK E ++ NRK
Sbjct: 699 ------LSNFPNCEAKRALEKLYKKREREKNESKNRK 729
>AT3G62310.1 | Symbols: | RNA helicase family protein |
chr3:23057516-23060561 REVERSE LENGTH=726
Length = 726
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 217/705 (30%), Positives = 331/705 (46%), Gaps = 98/705 (13%)
Query: 150 REKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILE--EEVSCLRGADCNIIC 207
R LP + K EFLK ++ NQ L++ GETG GKTTQ+PQF+++ + + + + C
Sbjct: 58 RRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKWLVGC 117
Query: 208 TQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLVQDPE 267
TQP E +GE VGY IR E S T L + T G+LLR+ + DP
Sbjct: 118 TQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADPL 177
Query: 268 LTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYFGNAPTI 327
L +++DE HER + D VMSAT+ A+ F +YF AP +
Sbjct: 178 LERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSGAPLM 237
Query: 328 HIPGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXXXXXXXXXXXPLTEMFEDVDVD 387
+PG PV + YT +PE D E
Sbjct: 238 KVPGRLHPV----------EIFYTQEPERDYLEA-------------------------- 261
Query: 388 THYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEIS---KLL 444
+R ++ ++C E G ILVFLTG +EI + +
Sbjct: 262 --------AIRTVVQI----------------HMC--EPPGDILVFLTGEEEIEDACRKI 295
Query: 445 DKLKGNRLLGD---PSKFLILPIHGSMPTVNQCEIFDRPP-------PNKRKIVLATNIA 494
+K GN LGD P K ++P++ ++P Q +IFD P P RKIV++TNIA
Sbjct: 296 NKEVGN--LGDQVGPIK--VVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIA 351
Query: 495 ESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRL 554
E+S+TID +VYV+D G AK+ Y+ ++ LL S ISKAS C+RL
Sbjct: 352 ETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRL 411
Query: 555 YP-KLIHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIEL 613
Y K ++ + EILR+ L L +K L + + F + PP + A+E+
Sbjct: 412 YTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF--DFMDPPAPETLMRALEV 469
Query: 614 LKTIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVL 673
L +GALD+ +LT G+ + PLDP + KML++ F C N L+++A L+ N F+
Sbjct: 470 LNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIR 529
Query: 674 PINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLID 733
P ++ AD AK F G DH+ LL + +K+ N +C+ENF++ ++ D
Sbjct: 530 PREAQKAADEAKARF-GHIEGDHLTLLNVYHAFKQNNEDPN---WCYENFINNRAMKSAD 585
Query: 734 DMRMQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALY 793
++R Q + ++S S N+ + Y + + + AG + V +R G +
Sbjct: 586 NVRQQLVRIMSRFNLKMCSTDFNSRDYYIN----IRKAMLAGYFMQVAHLERTGHYLTVK 641
Query: 794 TKEVGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNI 838
+V V +HPS N H +++Y+E V T+ +IR T+I
Sbjct: 642 DNQV--VHLHPS--NCLDH--KPEWVIYNEYVLTSRNFIRTVTDI 680
>AT4G18465.1 | Symbols: | RNA helicase family protein |
chr4:10197056-10201611 FORWARD LENGTH=695
Length = 695
Score = 270 bits (689), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 209/698 (29%), Positives = 333/698 (47%), Gaps = 76/698 (10%)
Query: 150 REKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADCNIICTQ 209
R++LP +K ++E L V + ++ GETG GKTTQ+PQ++ +E G I CTQ
Sbjct: 45 RQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYL--KEAGWAEGGRV-IACTQ 101
Query: 210 PXXXXXXXXXXXXXXERGEILGETVGYHIRLETKR-SAETRLLFCTTGVLLRQLVQDPEL 268
P E G LGE VGY IR E S T + F T GVL+R++++DP L
Sbjct: 102 PRRLAVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLL 161
Query: 269 TGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYFGNAPTIH 328
T S +++DE HER ++ D + SATI A SN+F ++ H
Sbjct: 162 TKYSVIMIDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKTMSNFFNSSKKRH 221
Query: 329 IPGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXXXXXXXXXXXPLTEMFEDVDVDT 388
P + P + ++P + EG V
Sbjct: 222 APEGSTPGPK-------------LEPAILSVEGR--------------------GFSVKI 248
Query: 389 HYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEIS---KLLD 445
HY V + + + S V ++I I E G +LVFLTG ++I KLL+
Sbjct: 249 HY------VEEPVSDYIRS------VVSTILLINEREPPGDVLVFLTGQEDIETAIKLLE 296
Query: 446 KLKGNRLLGDPSKFLILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVY 505
+ + + + S L LP++ + Q IF P KRK++L+TNIAE+S+T++ VVY
Sbjct: 297 E-EAHSNQKNSSGLLPLPLYSGLSRSEQELIFTPTPRGKRKVILSTNIAETSLTLEGVVY 355
Query: 506 VVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPK-LIHDAMP 564
V+D G +K+ Y+ ++ + L+ + ISKAS CYRLY + + MP
Sbjct: 356 VIDSGFSKQKFYNPISDIESLVVAPISKASARQRSGRAGRVRPGKCYRLYTEDYFLNQMP 415
Query: 565 EYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTIGALDEKE 624
+ E+ R+ L + +K+L + + F A PP S A+ A+E+L ++ LD+
Sbjct: 416 GEGIPEMQRSNLVSTVIQLKALGIDNILGFDWPA--PPSSEAMIRALEVLYSLQILDDDA 473
Query: 625 DLT-PLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPINRKEEADA 683
LT P G + +PLDP I KM+L S C + +TIAA L+ ++ +++ ++E D
Sbjct: 474 KLTSPTGFQVAELPLDPMISKMILASSELGCSHEIITIAAVLSVQSVWIIARGVQKEQDE 533
Query: 684 AKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMRMQFLNLL 743
AK FA + DH+ L ++G+ E+K+ +C++NFL+ +++ + ++R Q +
Sbjct: 534 AKLRFAA-AEGDHVTFLNVYKGFLESKKP---TQWCYKNFLNYQSMKKVVEIRDQLKRIA 589
Query: 744 SDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKEVG--KVD 801
+G KS D+E V + AG + N C+ +Y G +V
Sbjct: 590 RRLGITLKS--------CDGDMEAVRKAVTAGFFANA--CRLEPHSNGVYKTIRGSEEVY 639
Query: 802 IHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDSTNIS 839
IHPSSV V+ ++VY V T Y+R+ I+
Sbjct: 640 IHPSSVLFRVN---PKWVVYQSIVSTERQYMRNVVTIN 674
>AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein |
chr2:14872728-14879615 FORWARD LENGTH=1044
Length = 1044
Score = 205 bits (522), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 225/416 (54%), Gaps = 24/416 (5%)
Query: 428 GAILVFLTGWDEISKLLDKLKGN-RLLGDPSKFLIL-PIHGSMPTVNQCEIFDRPPPNKR 485
G +LVFL G +EI + + LK R LG + LI+ PI+ ++P+ Q +IF+ P R
Sbjct: 613 GDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGAR 672
Query: 486 KIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXX 545
K+VLATNIAE+S+TID + YVVD G +K SY+ + LL + ISKAS
Sbjct: 673 KVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGR 732
Query: 546 XXXXXCYRLYPKL-IHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPDS 604
CYRLY ++ + + + EI RT L + L +KSL + + +F + PP S
Sbjct: 733 TSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNF--DFMDPPPS 790
Query: 605 LAVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAA 664
A+ ++ELL +GAL++ +LT G+ + PLDP + KM+++ ++C + ++IAA
Sbjct: 791 EALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAM 850
Query: 665 LAY-RNPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENF 723
L+ + F P +++ AD A ++F + DHIA LK + WKE S +C+EN+
Sbjct: 851 LSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKETNYSTQ---WCYENY 907
Query: 724 LSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPNVVQC 783
+ +++ D+R Q LL + +D S AN +L+ + + AG +P+ +
Sbjct: 908 IQVRSMKRARDIRDQLEGLLERVE-IDVSSNAN-------ELDSIRKSIVAGFFPHTAKL 959
Query: 784 KRRGKRTALYTKEVGKVDIHPSSVNAGVHIFPLP-YLVYSEKVKTTSIYIRDSTNI 838
++ G + K V IHP+S + V LP ++VY + V T+ Y+R T +
Sbjct: 960 QKNGSYRTV--KHPQTVHIHPASGLSQV----LPRWVVYHQLVLTSKEYMRQVTEL 1009
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 100/195 (51%), Gaps = 4/195 (2%)
Query: 142 ALKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGA 201
A ++ R+ LP + + + L AV +QVL++ GETG GKTTQ+PQ++ E + L
Sbjct: 393 AFHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKL--- 449
Query: 202 DCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQ 261
+ CTQP E G LG VGY IR E S +T L + T G+LLR+
Sbjct: 450 -GKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRE 508
Query: 262 LVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYF 321
L+ +P+L S ++VDE HER + D + SAT++A+ FS++F
Sbjct: 509 LLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFF 568
Query: 322 GNAPTIHIPGFTFPV 336
AP PG +PV
Sbjct: 569 DQAPIFRFPGRRYPV 583
>AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein |
chr5:4122747-4128660 FORWARD LENGTH=1255
Length = 1255
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/467 (30%), Positives = 226/467 (48%), Gaps = 34/467 (7%)
Query: 428 GAILVFLTGWDEISKLLDKLKGN--RLLGDPSK----FLILPIHGSMPTVNQCEIFDRPP 481
G IL+F+TG DEI LK +L+ S+ LILPI+ +P Q +IF +P
Sbjct: 767 GDILIFMTGQDEIEAACFSLKERMEQLVSSSSREITNLLILPIYSQLPADLQAKIFQKPE 826
Query: 482 PNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXX 541
RK ++ATNIAE+S+T+D + YV+D G K ++ + L IS+A+
Sbjct: 827 DGARKCIVATNIAETSLTVDGIYYVIDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAG 886
Query: 542 XXXXXXXXXCYRLYPK--LIHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKAL 599
CYRLY + +++ +P + EI RT L + L +KSL++ + F +
Sbjct: 887 RAGRTGPGTCYRLYTESAYLNEMLPS-PVPEIQRTNLGNVVLLLKSLKIDNLLDF--DFM 943
Query: 600 QPPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPAL 659
PP + N++ L +GAL+ LT LG + PLDP + KMLLMG C++ L
Sbjct: 944 DPPPQENILNSMYQLWVLGALNNVGGLTDLGWKMVEFPLDPPLAKMLLMGERLDCIDEVL 1003
Query: 660 TIAAALAYRNPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFC 719
TI + L+ + F P R EE+DAA+ F SDH+ LL ++ WKE G D+C
Sbjct: 1004 TIVSMLSVPSVFFRPKERAEESDAAREKFFVPE-SDHLTLLNVYQQWKEHDYRG---DWC 1059
Query: 720 WENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAILCAGLYPN 779
+++L LR ++R Q L++L + +S G D ++V +C+ + N
Sbjct: 1060 NDHYLQVKGLRKAREVRSQLLDILKQLKIELRSCGP--------DWDIVRKAICSAYFHN 1111
Query: 780 VVQCKRRGK----RTALYTKEVGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIYIRDS 835
+ K G+ RT + +HPSS G+ P Y+VY E + TT Y++ +
Sbjct: 1112 SARLKGVGEYVNCRTGM------PCHLHPSSALYGLGYTP-DYVVYHELILTTKEYMQCA 1164
Query: 836 TNISDYALLLFGGNLVPSKSGDGIEMLGGYLHFSASKSVIELIKKLR 882
T++ + L G K D + + E ++KLR
Sbjct: 1165 TSVEPHWLAELGPMFFSVKDSDTSMLEHKKKQKEEKSGMEEEMEKLR 1211
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 144 KEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADC 203
K M R+ LP F ++ E L+ + +NQV+VV GETG GKTTQL Q++ E+ G
Sbjct: 549 KTMAEQRQYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHED------GYTI 602
Query: 204 NII--CTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQ 261
N I CTQP E LG+ +GY IR E T + + T GVLLR+
Sbjct: 603 NGIVGCTQPRRVAAMSVAKRVSEEMETELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRE 662
Query: 262 LVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYF 321
++D +L +++DE HER +N D V SAT+NA FSN+F
Sbjct: 663 TLKDSDLDKYRVVVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFF 722
Query: 322 GNAPTIHIPGFTFPV 336
G+ P +IPG TFPV
Sbjct: 723 GSVPIFNIPGRTFPV 737
>AT1G27900.1 | Symbols: | RNA helicase family protein |
chr1:9715615-9720346 REVERSE LENGTH=700
Length = 700
Score = 191 bits (486), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 212/422 (50%), Gaps = 17/422 (4%)
Query: 425 EGSGAILVFLTGWDEISKLLDKLKGN-RLLGDPS--KFLILPIHGSMPTVNQCEIFDRPP 481
E G IL+F+TG D+I KL+ +L+ R L + S +I P+HGS+P Q +F PP
Sbjct: 211 EPEGDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPP 270
Query: 482 PNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXX 541
PN R+ +++TNIAE+S+T+D VVYV+D G K+ Y+ + + L ISK
Sbjct: 271 PNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAG 330
Query: 542 XXXXXXXXXCYRLYPKLIH-DAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQ 600
CYRLYP ++ D + + EI RT L L++KSL L + L
Sbjct: 331 RAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILKFDFLD 390
Query: 601 PPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALT 660
P S ++++A++ L I A+DE +T +G+ + +PL+P++ + L+ + CL+ ALT
Sbjct: 391 APSSESLEDALKQLYFIDAIDENGAITRIGRTMSDLPLEPSLSRTLIEANETGCLSQALT 450
Query: 661 IAAALAYRNPFV----LPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEK 716
+ A L+ + P +K + D G DHI LL+ FE W R+ +
Sbjct: 451 VVAMLSAETTLLPARSKPSEKKRKHDEDSNLPNGSGYGDHIQLLQIFESW---DRTNYDP 507
Query: 717 DFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQYSH-DLEMVCAILCAG 775
+C EN + + + D+R Q ++ I GA+ S D + LC G
Sbjct: 508 VWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVG 567
Query: 776 LYPNVVQ--CKRRGKRTALYTKEVGKVDIHPSSVNAGVHIFPLP-YLVYSEKVKTTSIYI 832
+ + + G RT + ++ V +HPSSV + + +P Y+VY E + TT ++
Sbjct: 568 NANQIAERMLRHNGYRTLSFQSQL--VQVHPSSVLSADNDGMMPNYVVYHELISTTRPFM 625
Query: 833 RD 834
R+
Sbjct: 626 RN 627
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 153 LPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADCNIICTQPXX 212
LP + + + ++ V KN V+V+ GETG GK+TQL Q IL G I TQP
Sbjct: 4 LPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQ-ILHRHGYTKSGV---IAITQPRR 59
Query: 213 XXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLVQDPELTGVS 272
E LGE VGY IR E + +++TR+ + T GVLLR+ + +P L S
Sbjct: 60 VAAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYS 119
Query: 273 HLLVDEIHERGMNED-FXXXXXXXXXXXXXXXXXXVMSATINADLFSNYFGNAPTIHIPG 331
+++DE HER +N D + SAT++ + S +F P +++PG
Sbjct: 120 VIILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPG 179
Query: 332 FTFPVAEHY 340
+PV Y
Sbjct: 180 KLYPVEILY 188
>AT5G10370.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr5:3261245-3267188 FORWARD LENGTH=1775
Length = 1775
Score = 180 bits (456), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 157/600 (26%), Positives = 264/600 (44%), Gaps = 80/600 (13%)
Query: 144 KEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADC 203
+E + + LP + + + LK + + Q++V+ GETG GK+TQL QF+ + V+ A
Sbjct: 297 RECRRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVA----ASE 352
Query: 204 NIICTQPXXXXXXXXXXXXXXERGEILGE-TVGYHIRLETKRSAETRLLFCTTGVLLRQL 262
+I+CTQP E E TV + +++++ T LL+
Sbjct: 353 SIVCTQPRKIAAMTLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHY 412
Query: 263 VQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYFG 322
++D L+G+S +++DE HER +N D +MSAT +A S YF
Sbjct: 413 MKDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFF 472
Query: 323 NAPTIHIPGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXXXXXXXXXXXPLTEMFE 382
+ + + G NF P+ ++
Sbjct: 473 SCGILLVNG-------------------------RNF----------------PVEIVYS 491
Query: 383 DVDVDTHYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEGSGAILVFLTGWDEISK 442
D + +N +G + ++ G +V+ ++E I + E G IL FLT E+
Sbjct: 492 PSDTE---ENSVVG---GIASYVGD-----VVKMAVE-IHKTEKEGTILAFLTSQAEVEW 539
Query: 443 LLDKLKGNRLLGDPSKFLILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSITIDD 502
++ PS + LP+HG + Q +F P +RK++ ATNIAE+S+TI
Sbjct: 540 ACERFI------TPSA-IALPLHGKLSFEEQFRVFQNHP-GRRKVIFATNIAETSLTIPG 591
Query: 503 VVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPKLIHDA 562
V YV+D G KE+ Y+ ++ L +S++S CYRLY K D+
Sbjct: 592 VKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDS 651
Query: 563 MPEYQLAEILRTPLQELCLHIKSLQLGTVA--SFLEKALQPPDSLAVQNAIELLKTIGAL 620
M Q EI R L L + +L + +A +F++ + ++AVQN ++L GA+
Sbjct: 652 MNLNQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQL----GAV 707
Query: 621 DEK---EDLTPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPI-- 675
EK +LT G L + L+P +GK++L + + +AA +A + +
Sbjct: 708 VEKNGVHELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGN 767
Query: 676 -NRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDD 734
+ K +AD K F + D LL ++ W R K +CWEN L+ ++R +D
Sbjct: 768 FDDKMKADRLKVQFCNQN-GDLFTLLSVYKEWASLPRERRNK-WCWENSLNAKSMRRCED 825
>AT1G26370.1 | Symbols: | RNA helicase family protein |
chr1:9122030-9125368 REVERSE LENGTH=717
Length = 717
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 158/547 (28%), Positives = 237/547 (43%), Gaps = 94/547 (17%)
Query: 307 VMSATINADLFSNYFGNAPTIHIPGFTFPVAEHYLEDVLEKTRYTIKPEFDNFEGNXXXX 366
+MSA+++A +FS YFG A +H+ G FPV D+L YT+ PE D
Sbjct: 233 IMSASLDARVFSEYFGGAKAVHVQGRQFPV------DIL----YTVHPESD--------- 273
Query: 367 XXXXXXXXXPLTEMFEDVDVDTHYKNYSLGVRKSLEAWSGSQIDLGLVEASIEYICRNEG 426
+D LV +I I E
Sbjct: 274 -----------------------------------------YVDATLV--TIFQIHFEEK 290
Query: 427 SGAILVFLTGWDEISKLLDKLKGNRLLG---DPSKFLILPIHGSMPTVNQCEIFDRPPPN 483
G ILVFLTG DEI + ++L RL D K L L I ++P+ Q ++F P
Sbjct: 291 PGDILVFLTGQDEIESV-ERLVQERLQNIPEDKRKLLPLAIFSALPSEQQMKVFAPAPTG 349
Query: 484 KRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXXX 543
RK++LATNIAE+SITI + YV+D G K SYD + L SKA
Sbjct: 350 FRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPASKAQTLQRSGRA 409
Query: 544 XXXXXXXCYRLYPKLIHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVASFLEKALQPPD 603
+RLYP+ + + + EI R L + L +K+L + + F + P
Sbjct: 410 GREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQLKALGIDDIVGF--DFIDKPS 467
Query: 604 SLAVQNAIELLKTIGALDEKEDL-TPLGQHLCTIPLDPNIGKMLLMGSIFQCLNPALTIA 662
A+ A+ L ++GAL + L P+G + +PL+P K L++ + F CL L
Sbjct: 468 RGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALILANQFNCLEEMLITV 527
Query: 663 AALAYRNPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEGWKE------AKRSGNE- 715
A L+ + F P ++EEA +K FA DH+ L + E A SGN
Sbjct: 528 AVLSVESIFYDPREKREEARTSKNHFASVE-GDHLTYLSVYRESDEFLEKRKAAGSGNNI 586
Query: 716 ----KDFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKSRGANAYNQYSHDLEMVCAI 771
K +C EN+++ +L+ D+ Q + IGF S G +D+
Sbjct: 587 DKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCG--------NDMLAFRRC 638
Query: 772 LCAGLYPNVVQCKRRGKRTALYTKEVGKVDIHPSSVNAGVHIFPLPYLVYSEKVKTTSIY 831
L A + Q + G AL + EV V IHP+SV + ++++E ++T+ Y
Sbjct: 639 LAASFFLKAAQRQLDGTYRALESGEV--VHIHPTSV---LFRAKPECVIFNELMQTSKKY 693
Query: 832 IRDSTNI 838
I++ T I
Sbjct: 694 IKNLTII 700
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 3/144 (2%)
Query: 144 KEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADC 203
+++ R LP ++ ++ V KN +L++ GETG GKTTQLPQF+ C G
Sbjct: 32 QKIAEHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGF-CREGKMI 90
Query: 204 NIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLV 263
I TQP E LG+ VGY IR + S TRL + T G+LLR+ +
Sbjct: 91 GI--TQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREAL 148
Query: 264 QDPELTGVSHLLVDEIHERGMNED 287
DP L+ S ++VDE H+R ++ D
Sbjct: 149 LDPHLSRYSVIIVDEAHDRSVHTD 172
>AT4G01020.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr4:439086-445043 FORWARD LENGTH=1787
Length = 1787
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 190/409 (46%), Gaps = 38/409 (9%)
Query: 413 LVEASIEYICRNEGSGAILVFLTGWDEISKLLDKLKGNRLLGDPSKFLILPIHGSMPTVN 472
+V+ ++E I + E G IL FLT E+ ++ PS + LP+HG +
Sbjct: 508 VVKMAVE-IHKTEKEGTILAFLTSQAEVEWACERFVA------PSA-IALPLHGKLSFEE 559
Query: 473 QCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWIS 532
Q +F P +RK++ ATNIAE+S+TI V YV+D G KE+ Y+ ++ L +S
Sbjct: 560 QFMVFQNYP-GRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVS 618
Query: 533 KASXXXXXXXXXXXXXXXCYRLYPKLIHDAMPEYQLAEILRTPLQELCLHIKSLQLGTVA 592
++S CYRLY K D+M Q EI R L L + +L + +A
Sbjct: 619 QSSARQRAGRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRMLALGIDNIA 678
Query: 593 SFLEKALQPPDSLAVQNAIELLKTIGALDEKE---DLTPLGQHLCTIPLDPNIGKMLLMG 649
+F + + P A+ AI+ L +GA+ EK +LT G L + L+P +GK++L
Sbjct: 679 AF--EFVDAPVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILGC 736
Query: 650 SIFQCLNPALTIAAALAYRNPFVLPI---NRKEEADAAKRSFAGDSCSDHIALLKAFEGW 706
+ + +AA +A + + + K +AD K F D+ D LL ++ W
Sbjct: 737 FRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKADRLKVQFCNDN-GDLFTLLSVYKEW 795
Query: 707 KEAKRSGNEKDFCWENFLSPATLRLIDDMRMQF-------LNLLSDIGFVDKSRGANAYN 759
R K +CWEN L+ ++R +D + L L+S +V ++
Sbjct: 796 ASLPRDRRNK-WCWENSLNAKSMRRCEDTVKELEICIERELTLVSPSYWVWNPNEGTKHD 854
Query: 760 QYSHDLEMVCAILCAGLYPNVVQCK---RRGKRTALYTKEVGKVDIHPS 805
+Y L+MV + A L NV + G AL +++ V +HPS
Sbjct: 855 KY---LKMV---ILASLAENVAMYTGYDQLGYEVALTSQQ---VQLHPS 894
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 5/195 (2%)
Query: 143 LKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGAD 202
L+E + + LP + + + LK + Q++V+ GETG GK+TQL QF+ + V+ A
Sbjct: 293 LRECRRLEDGLPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVA----AS 348
Query: 203 CNIICTQPXXXXXXXXXXXXXXERGEILGE-TVGYHIRLETKRSAETRLLFCTTGVLLRQ 261
+I+CTQP E E TV + +++++ T LL+
Sbjct: 349 ESIVCTQPRKIAAMTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQH 408
Query: 262 LVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYF 321
++D L+G+S +++DE HER +N D +MSAT +A+ S Y
Sbjct: 409 YMKDRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYL 468
Query: 322 GNAPTIHIPGFTFPV 336
+ +H+ G FPV
Sbjct: 469 FDCGILHVNGRNFPV 483
>AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:9388613-9390774
REVERSE LENGTH=656
Length = 656
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 107/212 (50%), Gaps = 12/212 (5%)
Query: 142 ALKEMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGA 201
A ++ + RE LP + E LK + +NQVLV+ GETG GKTTQ+PQ+ L+E RG
Sbjct: 204 AAEKAREGREFLPIHGYREELLKLIEENQVLVIVGETGSGKTTQIPQY-LQEAGYTKRG- 261
Query: 202 DCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQ 261
I CTQP E G LG VGY IR E S +T + + T G+LLR+
Sbjct: 262 --KIGCTQPRRVAAMSVASRVAQEVGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLRE 319
Query: 262 LVQDPELTGVSHLLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYF 321
L+ +P+L S +++DE HER ++ D + SAT+ A FS YF
Sbjct: 320 LLIEPKLDSYSVIIIDEAHERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKFSEYF 379
Query: 322 GNAPTIHIPGFTFPVAE--------HYLEDVL 345
+A IPG +PV + YLE V+
Sbjct: 380 DSARIYLIPGRRYPVEKLFRKCPEPDYLETVI 411
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 119/219 (54%), Gaps = 7/219 (3%)
Query: 411 LGLVEASIEYICRNEGSGAILVFLTGWDEISKLLDKLKGNRL-LGDP-SKFLILPIHGSM 468
L V ++ I + E G ILVFLTG +EI + LK + LG S+ +I PI+ ++
Sbjct: 407 LETVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMMDLGTKGSEIIICPIYSNL 466
Query: 469 PTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLP 528
PT Q ++F+ P RK+VLATNIAE+S+TID V YV+D G K SY+ + LL
Sbjct: 467 PTPLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINSYNPRTGMESLLV 526
Query: 529 SWISKASXXXXXXXXXXXXXXXCYRLYPKLIHDAMPEYQLAEILRTPLQELCLHIKSLQL 588
+ ISKAS C+RLY I D P + EI R L + L +KSL +
Sbjct: 527 TPISKASAAQRAGRSGRTGPGKCFRLYN--IKDLEPT-TIPEIQRANLASVVLTLKSLGI 583
Query: 589 GTVASFLEKALQPPDSLAVQNAIELLKTIGALDEKEDLT 627
V +F + PP A+ A+ELL +GALDE ++T
Sbjct: 584 QDVFNF--DFMDPPPENALLKALELLYALGALDEIGEIT 620
>AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protein |
chr1:12099738-12104108 REVERSE LENGTH=1237
Length = 1237
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 187/455 (41%), Gaps = 73/455 (16%)
Query: 456 PSKFLILPIHGSMPTVNQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKET 515
P K +LP++ + Q +F+ +R +V+ATN+AE+S+TI + YVVD G+ K
Sbjct: 644 PGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVK 703
Query: 516 SYDALNKLACLLPSWISKASXXXXXXXXXXXXXXXCYRLYPKLI-HDAMPEYQLAEILRT 574
+YD+ + WIS+AS CYRLY + + E L EI++
Sbjct: 704 NYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKV 763
Query: 575 PLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTIGALDEKEDLTPLGQHLC 634
P+ + L +KS+ + V +F PP+ A++ A LK + ALD LTPLG+ +
Sbjct: 764 PVDGVILLMKSMNIPKVENF--PFPTPPEPSAIREAERCLKALEALDSNGGLTPLGKAMS 821
Query: 635 TIPLDPNIGKMLLMGSIFQCLNPALTIAAA-------------LAYRNPFVLPI------ 675
P+ P +MLL ++ Q L + A L+ NP ++
Sbjct: 822 HYPMSPRHSRMLL--TVIQMLKETRNYSRANLILGYAVAAVAALSLPNPLIMEFEGEKKN 879
Query: 676 ------------------NRKEEADAAKRSFAGDSCSDHIALLKAFEGWKEAKRSGNEKD 717
+RKE+ AA+ F+ S SD + + A + + S N
Sbjct: 880 ESKDADKTVKQEDKQRKKDRKEKIKAARDRFSNPS-SDALTVAYALHSF---EVSENGMG 935
Query: 718 FCWENFLSPATLRLIDDMRMQFLNLLSD-----------------IGFVDKSRGANAYNQ 760
FC N L T+ + ++ Q L L+ + I V+KS
Sbjct: 936 FCEANGLHLKTMDEMSKLKDQLLRLVFNCCKPSETEDSFSWTHGTIQDVEKSWRITTSTS 995
Query: 761 YSHDL-----EMVCAILCAGLYPNVVQCKRRGKRTALYTKEVGKVDIHPSSVNAGVHIFP 815
L E++ +CAG V + R + A +E + S +N+ +
Sbjct: 996 SKTPLLQNEEELLGEAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSLINSAPEL-- 1053
Query: 816 LPYLVYSEKVKTTSIYIRDSTNISDYALLLFGGNL 850
LVYSE + T Y+ +T + L+ +L
Sbjct: 1054 ---LVYSELLLTNRPYMHGATRVRPEWLVKHAKSL 1085
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 145 EMKSFREKLPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILE-----EEVSCLR 199
E++ R+ LP M+ E ++A++++ +++SG+TGCGKTTQ+PQF+ E ++ S
Sbjct: 233 EVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRS 292
Query: 200 GADCNIICTQPXXXXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLL 259
G I TQP E G LG+ VG+ +R + K + + F T G+LL
Sbjct: 293 GI---IGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILL 349
Query: 260 RQLVQDPELTGVSHLLVDEIHERGMNEDF 288
R++ D L S +++DE HER +N D
Sbjct: 350 REIQNDFLLRRYSVIILDEAHERSLNTDI 378
>AT5G14900.1 | Symbols: | helicase associated (HA2)
domain-containing protein | chr5:4822676-4823581 REVERSE
LENGTH=301
Length = 301
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 125/266 (46%), Gaps = 15/266 (5%)
Query: 574 TPLQELCLHIKSLQLGTVASFLEKALQPPDSLAVQNAIELLKTIGALDEKEDLTPLGQHL 633
T L L +K L + + F PD+LA A++ L +GALD+ +LT G+ +
Sbjct: 2 TNLANTVLTLKGLSVKNLVRFDLIDSPAPDTLA--RALDDLYHLGALDDDCNLTKTGEMM 59
Query: 634 CTIPLDPNIGKMLLMGSIFQCLNPALTIAAALAYRNPFVLPINRKEE-ADAAKRSFAGDS 692
PLDP + KML++ F C N L+I+A L+ N F+ P ++ AD AK SFA
Sbjct: 60 SEFPLDPQMAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHID 119
Query: 693 CSDHIALLKAFEGWKEAKRSGNEKDFCWENFLSPATLRLIDDMRMQFLNLLSDIGFVDKS 752
DH+ LL F + + + N +C F++ ++ +R Q + ++ S
Sbjct: 120 -GDHLTLLNLFHAFLQNNQDPN---WCCTKFINYRAMKSAVSVREQLVRIMLRFQIKLCS 175
Query: 753 RGANAYNQYSHDLEMVCAILCAGLYPNVVQCKRRGKRTALYTKEVGKVDIHPSSVNAGVH 812
N+ + Y + + L AG + V +R G K+ V +HPS N H
Sbjct: 176 PDFNSRDYYVN----IRKALLAGYFMQVAHLERTGHYLTFRDKDDQVVHLHPS--NCLDH 229
Query: 813 IFPLPYLVYSEKVKTTSIYIRDSTNI 838
++VY+E V T+ +IR T+I
Sbjct: 230 --KPEWVVYNEYVFTSRNFIRTVTHI 253
>AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase family
protein | chr2:19545828-19550871 REVERSE LENGTH=1015
Length = 1015
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 153 LPAFKMKSEFLKAVSKNQVLVVSGETGCGKTTQLPQFILEEEVSCLRGADCNIICTQPXX 212
LP MK + + +N+V ++ GE GCGK++Q+PQF+LE ++ I+CTQP
Sbjct: 26 LPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLEANMA-------PILCTQPRR 78
Query: 213 XXXXXXXXXXXXERGEILGETVGYHIRLETKRSAETRLLFCTTGVLLRQLVQDPELTGVS 272
R LG +GYHI + +++LF T GVLL +++ D L +
Sbjct: 79 FAVVAVAKMVAKSRNSDLGGEIGYHIGHSKILTEGSKILFKTAGVLLDEML-DKGLNALK 137
Query: 273 H--LLVDEIHERGMNEDFXXXXXXXXXXXXXXXXXXVMSATINADLFSNYF 321
+ +++DE+HER + D +MSAT + + +YF
Sbjct: 138 YKVIILDEVHERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYF 188
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 7/163 (4%)
Query: 483 NKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASXXXXXXX 542
++RK++LATNIAESS+TI V YV+D ++ + +D K + W+S++
Sbjct: 320 SRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLVWVSRSQAEQRRGR 379
Query: 543 XXXXXXXXCYRLYPKLIHDAMPEYQLAEILRTPLQELCLHI---KSLQLGTVASFLEKAL 599
YRL P + + E++ IL+ L++ LHI +S + + L KA+
Sbjct: 380 TGRTCDGEVYRLVPSAFFNKLEEHEPPSILKLSLRQQVLHICCTESRAINDANALLAKAM 439
Query: 600 QPPDSLAVQNAIELLKTIGALDE----KEDLTPLGQHLCTIPL 638
PPD V +A+ +L +I AL + + + T G+ L + PL
Sbjct: 440 DPPDPDVVDDALRMLLSIQALRKSPRGRYEPTFYGRLLASFPL 482