Miyakogusa Predicted Gene

Lj5g3v0817620.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0817620.2 tr|Q7XVU7|Q7XVU7_ORYSJ OSJNBa0035B13.4 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0035B13.4
PE,34.55,7e-18,FPL,Uncharacterised protein family FPL; seg,NULL;
UNCHARACTERIZED,NULL,CUFF.54005.2
         (797 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G28430.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   283   3e-76

>AT3G28430.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: mitochondrion;
           EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6
           growth stages; CONTAINS InterPro DOMAIN/s: Protein of
           unknown function FPL (InterPro:IPR019155); Has 243 Blast
           hits to 233 proteins in 101 species: Archae - 0;
           Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
           Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
           | chr3:10657441-10662404 REVERSE LENGTH=837
          Length = 837

 Score =  283 bits (724), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 155/363 (42%), Positives = 226/363 (62%), Gaps = 9/363 (2%)

Query: 1   MLRSFWRSIDRFSAQHFKHVIHELQQIKVVDKHNKELVTDLLQSIVEIVTYGDRQDPLIF 60
           M  SF R  DRFS    +++  +L++I++V++ NK+LV + L+SI EI+TYGD+ DPL F
Sbjct: 1   MWLSFLRPRDRFSLAELRYLTDQLRKIQIVNEANKDLVIEALRSIAEILTYGDQHDPLFF 60

Query: 61  ECFMEHQVMAEFVRILKISGNSKIEAPLLQYLSIMIQNMDSEHAIYYCFSNGYINSIISH 120
           E FME QVM EFVRIL++S    +   LLQ +SIMIQN+ SE AIYY FSN Y+N +I++
Sbjct: 61  EFFMEKQVMGEFVRILRVSKTVTVSVQLLQTMSIMIQNLKSEQAIYYLFSNEYVNYLITY 120

Query: 121 PYKFVGGDLAPYYVSFLRAISCKINRDTLCLLLKVHGDAVVSFPLYTEALRFAHHEEKMI 180
            + F   +L  YY+SFLRA+S K+N+ T+ LLLK   D VVSFPLY E ++FA HEE MI
Sbjct: 121 TFDFQHEELLSYYISFLRAVSGKLNKHTISLLLKTENDVVVSFPLYVEGIQFAFHEENMI 180

Query: 181 QTAIRALILNIYIVSDDMVCQFISTPPVSEYFSDLVHRLRDLYFGLDAFLHDKGKMDTKK 240
           +TA+RAL LN+Y V D+ V  ++ +PP +EYFS L+   +     L A + +  K  +  
Sbjct: 181 RTAVRALTLNVYHVGDESVNDYVVSPPHTEYFSKLISFFQKQCMDLSAMVLNTLKSPSPD 240

Query: 241 RRNGLILQSDKIVDELYFLKDILNVGEPHLTRLVTENLLNGLVFPVLFSLLASKDNNGSG 300
               L    D I D LY+  D+++ G P + RL+T+++L  L  P+L   L S+  N   
Sbjct: 241 SGGKLFSAVDGIEDTLYYFSDVISAGIPDIGRLITDHILQHLTLPLLLPSLCSEAVNDIS 300

Query: 301 LSAITSLYMVSCLLQVVGGRSMINNVAGVIL--------YNFMKLNVRVLNEGNAY-DGH 351
           +  +TSLY++SC+L++V  + + N  A  +          + +K N  +  EG  Y +GH
Sbjct: 301 VDPVTSLYLLSCILRIVKIKDLANMTAATLFCPVKAFISSSLVKPNSSLAPEGLTYVNGH 360

Query: 352 NDK 354
            DK
Sbjct: 361 PDK 363



 Score =  162 bits (410), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 145/300 (48%), Gaps = 11/300 (3%)

Query: 494 AMILWHVGWCLQKLLNFHREGLNGYNLLLFTTSYDQSRTRFLKEVDGIWFDHIPDTLRTE 553
           A  LW  GW L++LL +     N  +L +   SY++ +    +E+ GIW D +   L  E
Sbjct: 534 AETLWDGGWLLRQLLPYSEAEFNRKHLKMLNVSYEKCKNSLTREIKGIWPDLLIRVLLDE 593

Query: 554 WASCKRALEQSSQYKDPLFLLDLDLHQQSTNDET---SSYYAWQRMVDTIKVFILHVQLK 610
           W  CKR +E  S  K+P  +L L L + S+ND +   SS+ A +RM + +KVF+L  QL+
Sbjct: 594 WRKCKRVIEAPSPQKEPKSVL-LQLDRSSSNDNSVSESSFTAGERMCEVVKVFVLLHQLQ 652

Query: 611 AFILNGVLVEKALLNTVA-TSTNXXXXXXXXXXXXXXFGSNVSLESGMPCEIAFSNSEIR 669
            F L   L E+  +   A  S                 G+ + L   +PC IAF   + R
Sbjct: 653 IFSLGRSLPEQPPIYPPADRSETSRATRAGLDVSVPKPGTELKLVDAVPCRIAFERGKER 712

Query: 670 DIYVIPVACGMMGKLLLTEKHPFRSRHGVVIAIAPLAGLRPKIDEDHPSWLHLRIREFGP 729
           D   + ++ G  G ++L +       +G+V   APLAG +P+IDE HP WLHLRIR    
Sbjct: 713 DFSFLALSSGESGWIVLADPD-----NGIVRVTAPLAGCKPRIDEKHPRWLHLRIRPSTL 767

Query: 730 QFYTIKTRGNPLNMPDHS-ADGKWTLGFTDAKACEEARLAILNEITKQRSAVEYVLAPLL 788
                  RG    +      DG+W L F D ++C  A   +  EI  Q S VE  L PL 
Sbjct: 768 PLLDPTKRGVYEKLKSKGLVDGRWILAFRDDESCHSAYSMVAGEIDLQCSEVERRLRPLF 827