Miyakogusa Predicted Gene

Lj5g3v0804090.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0804090.1 tr|Q46LP7|Q46LP7_PROMT Secreted pentapeptide
repeats protein (Precursor) OS=Prochlorococcus marinus
,39.62,4e-19,Pentapeptide,Pentapeptide repeat; UNCHARACTERIZED,NULL;
seg,NULL; Pentapeptide repeat-like,NULL,CUFF.53977.1
         (225 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44920.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   263   6e-71
AT2G44920.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   191   5e-49
AT1G12250.2 | Symbols:  | Pentapeptide repeat-containing protein...    54   1e-07
AT1G12250.1 | Symbols:  | Pentapeptide repeat-containing protein...    53   1e-07

>AT2G44920.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:18524419-18526502 FORWARD
           LENGTH=224
          Length = 224

 Score =  263 bits (673), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 131/175 (74%), Positives = 144/175 (82%)

Query: 51  QKLTFSLAESLPSAAIVALLSASFFFVDPALAFRGGGPYGQEVTRGQDLSGKDFSGRTLI 110
           + + +SL E +   ++ AL+SAS FFVDPALAF+GGGPYGQ VTRGQDLSGKDFSG+TLI
Sbjct: 50  RSVVWSLGEEVSKRSLFALVSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGQTLI 109

Query: 111 KQDFKTSILRQANFKGAKLLGASFFDSDLTGXXXXXXXXXXXXXXXXNVTKANLSNANLE 170
           +QDFKTSILRQANFKGAKLLGASFFD+DLTG                NVTK NL+NANLE
Sbjct: 110 RQDFKTSILRQANFKGAKLLGASFFDADLTGADLSEADLRGADFSLANVTKVNLTNANLE 169

Query: 171 GALATGNTSFKGSNITGADFTDVPLRDDQREYLCKVADGVNPTTGNATRETLLCN 225
           GA  TGNTSFKGSNITGADFTDVPLRDDQR YLCKVADGVN TTGNATR+TLLCN
Sbjct: 170 GATVTGNTSFKGSNITGADFTDVPLRDDQRVYLCKVADGVNATTGNATRDTLLCN 224


>AT2G44920.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:18524419-18526236 FORWARD
           LENGTH=210
          Length = 210

 Score =  191 bits (484), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 97/138 (70%), Positives = 109/138 (78%)

Query: 51  QKLTFSLAESLPSAAIVALLSASFFFVDPALAFRGGGPYGQEVTRGQDLSGKDFSGRTLI 110
           + + +SL E +   ++ AL+SAS FFVDPALAF+GGGPYGQ VTRGQDLSGKDFSG+TLI
Sbjct: 50  RSVVWSLGEEVSKRSLFALVSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGQTLI 109

Query: 111 KQDFKTSILRQANFKGAKLLGASFFDSDLTGXXXXXXXXXXXXXXXXNVTKANLSNANLE 170
           +QDFKTSILRQANFKGAKLLGASFFD+DLTG                NVTK NL+NANLE
Sbjct: 110 RQDFKTSILRQANFKGAKLLGASFFDADLTGADLSEADLRGADFSLANVTKVNLTNANLE 169

Query: 171 GALATGNTSFKGSNITGA 188
           GA  TGNTSFKGSNITGA
Sbjct: 170 GATVTGNTSFKGSNITGA 187


>AT1G12250.2 | Symbols:  | Pentapeptide repeat-containing protein |
           chr1:4159623-4161269 FORWARD LENGTH=206
          Length = 206

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 21/127 (16%)

Query: 98  DLSGKDFSGRTLIKQDFKTSILRQANFKGAKLLGASFFDSDLTGXXXXXXXXXXXXXXXX 157
           D+   DFSG T      + ++  +ANF GA L   +  D  +                  
Sbjct: 61  DMRESDFSGSTFNGAYLEKAVAYKANFSGADL-SDTLMDRMV------------------ 101

Query: 158 NVTKANLSNANLEGALATGNTSFKGSNITGADFTDVPLRDDQREYLCKVADGVNPTTGNA 217
            + +ANL+NA L  ++ T  +   G+ I GADF+D  +   Q++ LCK A G NP TG  
Sbjct: 102 -LNEANLTNAVLVRSVLT-RSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVD 159

Query: 218 TRETLLC 224
           TR++L C
Sbjct: 160 TRKSLGC 166


>AT1G12250.1 | Symbols:  | Pentapeptide repeat-containing protein |
           chr1:4159287-4161269 FORWARD LENGTH=280
          Length = 280

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 21/127 (16%)

Query: 98  DLSGKDFSGRTLIKQDFKTSILRQANFKGAKLLGASFFDSDLTGXXXXXXXXXXXXXXXX 157
           D+   DFSG T      + ++  +ANF GA L   +  D  +                  
Sbjct: 135 DMRESDFSGSTFNGAYLEKAVAYKANFSGADL-SDTLMDRMV------------------ 175

Query: 158 NVTKANLSNANLEGALATGNTSFKGSNITGADFTDVPLRDDQREYLCKVADGVNPTTGNA 217
            + +ANL+NA L  ++ T  +   G+ I GADF+D  +   Q++ LCK A G NP TG  
Sbjct: 176 -LNEANLTNAVLVRSVLT-RSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVD 233

Query: 218 TRETLLC 224
           TR++L C
Sbjct: 234 TRKSLGC 240