Miyakogusa Predicted Gene

Lj5g3v0770590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0770590.1 Non Chatacterized Hit- tr|K4BP61|K4BP61_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,32.58,6e-17,
,CUFF.53966.1
         (400 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G64170.1 | Symbols:  | dentin sialophosphoprotein-related | c...    82   5e-16
AT5G64170.2 | Symbols:  | dentin sialophosphoprotein-related | c...    82   5e-16

>AT5G64170.1 | Symbols:  | dentin sialophosphoprotein-related |
           chr5:25672904-25675445 REVERSE LENGTH=566
          Length = 566

 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 84/175 (48%), Gaps = 18/175 (10%)

Query: 24  KEQKRETSDNRSMSDHYFKSSNLDSTGGELCADDTILGDKCLMEDDTVSQYSISHISQPD 83
           K+ +  T ++ + SDH F   ++D         D +L D     +D V  YS++ I   +
Sbjct: 44  KDVQDMTLEDTNTSDHGFNGGHVDVVEN-FSTGDPMLCDTSAATNDGVYNYSLNSIPDAE 102

Query: 84  NELSFLDND---------GWLDFGNFEDIDRTMLNCDLTFGMGSLNNEEEFCWLSSSHGT 134
           N+LSF DN          GW D GNFED+D  + +CD TFG+ SLNNE +  W SS+   
Sbjct: 103 NDLSFFDNGDKEKNDLFYGWGDIGNFEDVDNMLRSCDSTFGLDSLNNEGDLGWFSSAQPN 162

Query: 135 EGSDDALKSDF---KFSSAEASPFKSISD--NNINPNENIE---GLTIHDCSRKA 181
           E +  A+  D    K    + +    + D  NN  PN  +E   G TI D S + 
Sbjct: 163 EETAGAMTDDLKPDKMLENQRTAMLQVEDFLNNSEPNHAVEDEYGYTIEDDSAQG 217


>AT5G64170.2 | Symbols:  | dentin sialophosphoprotein-related |
           chr5:25672904-25675934 REVERSE LENGTH=616
          Length = 616

 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 84/175 (48%), Gaps = 18/175 (10%)

Query: 24  KEQKRETSDNRSMSDHYFKSSNLDSTGGELCADDTILGDKCLMEDDTVSQYSISHISQPD 83
           K+ +  T ++ + SDH F   ++D         D +L D     +D V  YS++ I   +
Sbjct: 94  KDVQDMTLEDTNTSDHGFNGGHVDVVEN-FSTGDPMLCDTSAATNDGVYNYSLNSIPDAE 152

Query: 84  NELSFLDND---------GWLDFGNFEDIDRTMLNCDLTFGMGSLNNEEEFCWLSSSHGT 134
           N+LSF DN          GW D GNFED+D  + +CD TFG+ SLNNE +  W SS+   
Sbjct: 153 NDLSFFDNGDKEKNDLFYGWGDIGNFEDVDNMLRSCDSTFGLDSLNNEGDLGWFSSAQPN 212

Query: 135 EGSDDALKSDF---KFSSAEASPFKSISD--NNINPNENIE---GLTIHDCSRKA 181
           E +  A+  D    K    + +    + D  NN  PN  +E   G TI D S + 
Sbjct: 213 EETAGAMTDDLKPDKMLENQRTAMLQVEDFLNNSEPNHAVEDEYGYTIEDDSAQG 267