Miyakogusa Predicted Gene
- Lj5g3v0747120.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0747120.1 Non Chatacterized Hit- tr|I1JFU8|I1JFU8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.34691
PE,83.87,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2, ATP-binding
domain; HELICASE_CTER,Helicase, C-termina,CUFF.53898.1
(597 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 797 0.0
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 790 0.0
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 754 0.0
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 754 0.0
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 754 0.0
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 353 2e-97
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 343 2e-94
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 339 3e-93
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 335 8e-92
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 335 8e-92
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 335 8e-92
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 335 8e-92
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 324 1e-88
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 324 1e-88
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 312 5e-85
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 304 9e-83
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 296 4e-80
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 295 7e-80
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 293 3e-79
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 289 5e-78
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 283 3e-76
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 277 2e-74
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 263 3e-70
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 253 3e-67
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 253 3e-67
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 249 3e-66
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 246 4e-65
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 246 4e-65
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 244 9e-65
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 240 2e-63
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 237 2e-62
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 236 2e-62
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 224 1e-58
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 223 3e-58
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 222 6e-58
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 210 2e-54
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 205 9e-53
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 204 2e-52
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 202 4e-52
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 199 7e-51
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 197 2e-50
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 197 2e-50
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 195 7e-50
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 195 8e-50
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 193 2e-49
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 193 4e-49
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 192 4e-49
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 192 4e-49
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 188 1e-47
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 187 2e-47
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 187 3e-47
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 187 3e-47
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 186 4e-47
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 185 9e-47
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 184 2e-46
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 184 2e-46
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 178 1e-44
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 175 7e-44
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 174 1e-43
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 174 1e-43
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 172 6e-43
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 171 1e-42
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 169 5e-42
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 167 3e-41
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 164 1e-40
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 164 1e-40
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 158 1e-38
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 157 2e-38
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 157 2e-38
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 155 6e-38
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 154 2e-37
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 148 1e-35
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 136 4e-32
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 136 5e-32
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 129 6e-30
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 114 2e-25
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 110 3e-24
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 78 2e-14
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 77 3e-14
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 62 1e-09
AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosph... 54 3e-07
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/530 (75%), Positives = 448/530 (84%), Gaps = 14/530 (2%)
Query: 29 RPAYVPPHLRNRPLSSEPPAATSQSYDRGNY-----------XXXXXXXXXXXFSRPD-- 75
RPAYVPPHLRNRP +SEP A + DR Y R D
Sbjct: 27 RPAYVPPHLRNRPAASEP-VAPLPANDRVGYGGPPSGSRWAPGGSGVGVGGGGGYRADAG 85
Query: 76 FGRQGYGSAAQTGGGWNSXXXXXXXXXXEVNPFENDDNDVDQSVGEQENTGINFEAYDDI 135
G G + GGGWN+ EVNPFENDD++ + + EQ+NT INF+AY+DI
Sbjct: 86 RPGSGSGYGGRGGGGWNNRSGGWDRREREVNPFENDDSEPEPAFTEQDNTVINFDAYEDI 145
Query: 136 PVDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQT 195
P++TSG+NVPPPVNTFAEIDLG+ALN NI+RCKYVKPTPVQR+AIPI L GRDLMACAQT
Sbjct: 146 PIETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQT 205
Query: 196 GSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTG 255
GSGKTAAFCFPIISGIM++Q++QRPR +RT +P+A+ILSPTREL+ QIHDEAKKFSYQTG
Sbjct: 206 GSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTG 265
Query: 256 VKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLD 315
VKVVVAYGG PI QQLRELERGVDILVATPGRL DLLERARVS+QMIR+LALDEADRMLD
Sbjct: 266 VKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLD 325
Query: 316 MGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDL 375
MGFEPQIRKIVEQMDMPP G+RQT+LFSATFP+EIQRLA+DFLANY+FLAVGRVGSSTDL
Sbjct: 326 MGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDL 385
Query: 376 IAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPA 435
I QRVE+VLDSDKRSHLMDLLHAQREN GKQ LTLVFVETK+GAD+LE+ LC+NGFPA
Sbjct: 386 IVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPA 445
Query: 436 TCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHR 495
T IHGDRTQQERE+AL++FKSG TPILVATDVAARGLDIP V+HVVNFDLPNDIDDYVHR
Sbjct: 446 TSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 505
Query: 496 IGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLTRYAAKA 545
IGRTGRAGK GLATAFFN+GN S+A+PLA+LMQEANQEVP WLTRYA+++
Sbjct: 506 IGRTGRAGKSGLATAFFNDGNTSLARPLAELMQEANQEVPEWLTRYASRS 555
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/517 (76%), Positives = 435/517 (84%), Gaps = 2/517 (0%)
Query: 29 RPAYVPPHLRNRPLSSEPPAATSQSYDRGNYXXXXXXXXXXXFSRPDFGRQGYGSAAQTG 88
R YVPPHLR+R SSE A + + DRG Y GYG
Sbjct: 28 RTNYVPPHLRSRTPSSEFVAPSPGNNDRGGYGGANSGYGGRGQGY-GGRGSGYGGRGGPV 86
Query: 89 GGWNSXXXXXXXXXXEVNPFENDDNDVDQSVGEQENTGINFEAYDDIPVDTSGENVPPPV 148
GGWN+ E NPF ND N D +V EQENT INFEAY+DIP++TSG+NVPPPV
Sbjct: 87 GGWNARSGGWDRRDTETNPFGNDGN-ADPAVNEQENTVINFEAYEDIPIETSGDNVPPPV 145
Query: 149 NTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPII 208
NTFAEIDLG+ALN NIQRCKYVKPTPVQR AIPI AGRDLMACAQTGSGKTAAFCFPII
Sbjct: 146 NTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPII 205
Query: 209 SGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPIT 268
SGIM++Q+I+RPR R +P+A+ILSPTREL+CQIHDEA+KFSYQTGVKVVVAYGG P+
Sbjct: 206 SGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVN 265
Query: 269 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQ 328
QQ+RELERGVDILVATPGRL DLLER RVSLQM+R+LALDEADRMLDMGFEPQIRKIV+Q
Sbjct: 266 QQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQ 325
Query: 329 MDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDLIAQRVEYVLDSDK 388
MDMPPPG+RQTMLFSATFP+EIQRLASDFL+NY+FLAVGRVGSSTDLI QRVE+V DSDK
Sbjct: 326 MDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDK 385
Query: 389 RSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQERE 448
RSHLMDLLHAQREN GKQ LTLVFVETKKGAD+LE+ LC+NGFPAT IHGDR+QQERE
Sbjct: 386 RSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQERE 445
Query: 449 MALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLA 508
+ALRSFK+G TPILVATDVAARGLDIP V+HVVNFDLPNDIDDYVHRIGRTGRAG GLA
Sbjct: 446 VALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLA 505
Query: 509 TAFFNEGNLSMAKPLADLMQEANQEVPAWLTRYAAKA 545
TAFFN+ N +MAKPLA+LMQEANQEVP WLTRYA++A
Sbjct: 506 TAFFNDNNTTMAKPLAELMQEANQEVPDWLTRYASRA 542
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/467 (78%), Positives = 411/467 (88%), Gaps = 7/467 (1%)
Query: 104 EVNPFENDDNDVDQSVGEQENTGINFEAYDDIPVDTSGENVPPPVNTFAEIDLGDALNQN 163
EVNPF DD +++ EQENTGINF+AY+DIPV+TSG +VPPPVNTFA+IDLGDALN N
Sbjct: 107 EVNPF-GDDAELEPVFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGDALNLN 165
Query: 164 IQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVA 223
I+RCKYV+PTPVQR+AIPI LA RDLMACAQTGSGKTAAFCFPIISGIM++Q+++RPR +
Sbjct: 166 IRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGS 225
Query: 224 RTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVA 283
R +P A+ILSPTREL+CQIHDEAKKFSYQTGVKVVVAYGG PI QQLRELERG DILVA
Sbjct: 226 RAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVA 285
Query: 284 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFS 343
TPGRL DLLERARVS+QMIR+LALDEADRMLDMGFEPQIRKIVEQMDMPP G+RQTMLFS
Sbjct: 286 TPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFS 345
Query: 344 ATFPKEIQRLASDFLANYVFLAVGRVGSSTDLIAQRVEYVLDSDKRSHLMDLLHAQRENE 403
ATFP +IQRLA+DF++NY+FLAVGRVGSSTDLI QRVE+V +SDKRSHLMDLLHAQRE +
Sbjct: 346 ATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRETQ 405
Query: 404 TFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILV 463
KQ LTLVFVETK+GAD LE+ LC+N FPAT IHGDRTQQERE+ALRSFK+G TPILV
Sbjct: 406 --DKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILV 463
Query: 464 ATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNLSMAKPL 523
ATDVAARGLDIP V+HVVNFDLPNDIDDYVHRIGRTGRAGK G+ATAFFNE N +A+ L
Sbjct: 464 ATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSL 523
Query: 524 ADLMQEANQEVPAWLTRYAAKAXXXXXXXXXXXXXXXXFGGRDFRKE 570
A+LMQEANQEVP WLTRYA++A FGGRDFR+E
Sbjct: 524 AELMQEANQEVPEWLTRYASRA----SFGGGKKRSGGRFGGRDFRRE 566
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/467 (78%), Positives = 411/467 (88%), Gaps = 7/467 (1%)
Query: 104 EVNPFENDDNDVDQSVGEQENTGINFEAYDDIPVDTSGENVPPPVNTFAEIDLGDALNQN 163
EVNPF DD +++ EQENTGINF+AY+DIPV+TSG +VPPPVNTFA+IDLGDALN N
Sbjct: 107 EVNPF-GDDAELEPVFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGDALNLN 165
Query: 164 IQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVA 223
I+RCKYV+PTPVQR+AIPI LA RDLMACAQTGSGKTAAFCFPIISGIM++Q+++RPR +
Sbjct: 166 IRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGS 225
Query: 224 RTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVA 283
R +P A+ILSPTREL+CQIHDEAKKFSYQTGVKVVVAYGG PI QQLRELERG DILVA
Sbjct: 226 RAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVA 285
Query: 284 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFS 343
TPGRL DLLERARVS+QMIR+LALDEADRMLDMGFEPQIRKIVEQMDMPP G+RQTMLFS
Sbjct: 286 TPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFS 345
Query: 344 ATFPKEIQRLASDFLANYVFLAVGRVGSSTDLIAQRVEYVLDSDKRSHLMDLLHAQRENE 403
ATFP +IQRLA+DF++NY+FLAVGRVGSSTDLI QRVE+V +SDKRSHLMDLLHAQRE +
Sbjct: 346 ATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRETQ 405
Query: 404 TFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILV 463
KQ LTLVFVETK+GAD LE+ LC+N FPAT IHGDRTQQERE+ALRSFK+G TPILV
Sbjct: 406 --DKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILV 463
Query: 464 ATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNLSMAKPL 523
ATDVAARGLDIP V+HVVNFDLPNDIDDYVHRIGRTGRAGK G+ATAFFNE N +A+ L
Sbjct: 464 ATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSL 523
Query: 524 ADLMQEANQEVPAWLTRYAAKAXXXXXXXXXXXXXXXXFGGRDFRKE 570
A+LMQEANQEVP WLTRYA++A FGGRDFR+E
Sbjct: 524 AELMQEANQEVPEWLTRYASRA----SFGGGKKRSGGRFGGRDFRRE 566
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/467 (78%), Positives = 411/467 (88%), Gaps = 7/467 (1%)
Query: 104 EVNPFENDDNDVDQSVGEQENTGINFEAYDDIPVDTSGENVPPPVNTFAEIDLGDALNQN 163
EVNPF DD +++ EQENTGINF+AY+DIPV+TSG +VPPPVNTFA+IDLGDALN N
Sbjct: 107 EVNPF-GDDAELEPVFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGDALNLN 165
Query: 164 IQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVA 223
I+RCKYV+PTPVQR+AIPI LA RDLMACAQTGSGKTAAFCFPIISGIM++Q+++RPR +
Sbjct: 166 IRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGS 225
Query: 224 RTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVA 283
R +P A+ILSPTREL+CQIHDEAKKFSYQTGVKVVVAYGG PI QQLRELERG DILVA
Sbjct: 226 RAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVA 285
Query: 284 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFS 343
TPGRL DLLERARVS+QMIR+LALDEADRMLDMGFEPQIRKIVEQMDMPP G+RQTMLFS
Sbjct: 286 TPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFS 345
Query: 344 ATFPKEIQRLASDFLANYVFLAVGRVGSSTDLIAQRVEYVLDSDKRSHLMDLLHAQRENE 403
ATFP +IQRLA+DF++NY+FLAVGRVGSSTDLI QRVE+V +SDKRSHLMDLLHAQRE +
Sbjct: 346 ATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQRETQ 405
Query: 404 TFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILV 463
KQ LTLVFVETK+GAD LE+ LC+N FPAT IHGDRTQQERE+ALRSFK+G TPILV
Sbjct: 406 --DKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILV 463
Query: 464 ATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNLSMAKPL 523
ATDVAARGLDIP V+HVVNFDLPNDIDDYVHRIGRTGRAGK G+ATAFFNE N +A+ L
Sbjct: 464 ATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSL 523
Query: 524 ADLMQEANQEVPAWLTRYAAKAXXXXXXXXXXXXXXXXFGGRDFRKE 570
A+LMQEANQEVP WLTRYA++A FGGRDFR+E
Sbjct: 524 AELMQEANQEVPEWLTRYASRA----SFGGGKKRSGGRFGGRDFRRE 566
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 184/408 (45%), Positives = 259/408 (63%), Gaps = 24/408 (5%)
Query: 137 VDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTG 196
+ G +VP P+ F + + D + + I + + +PTP+Q P++L GRDL+ A+TG
Sbjct: 153 ISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETG 212
Query: 197 SGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGV 256
SGKT A+ P + + + PR+ + P+ LIL+PTREL+ QI +E++KF ++GV
Sbjct: 213 SGKTLAYLLPALVHVSAQ-----PRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGV 267
Query: 257 KVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 316
+ YGGAP Q+R+L RGV+I++ATPGRL+D+LE +L+ + YL LDEADRMLDM
Sbjct: 268 RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDM 327
Query: 317 GFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDL- 375
GFEPQIRKIV Q+ RQT+L+SAT+P+E++ LA FL + +G STDL
Sbjct: 328 GFEPQIRKIVSQIRPD----RQTLLWSATWPREVETLARQFLRDPYKAIIG----STDLK 379
Query: 376 ----IAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVN 431
I Q +E V +K + L+ LL + L+FVETK+G D + L ++
Sbjct: 380 ANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKI------LIFVETKRGCDQVTRQLRMD 433
Query: 432 GFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDD 491
G+PA IHGD+TQ ER+ L FKSG +PI+ ATDVAARGLD+ + VVN+D PN ++D
Sbjct: 434 GWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLED 493
Query: 492 YVHRIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLT 539
Y+HRIGRTGRAG G+A FF N A+ L ++QEA Q VP L+
Sbjct: 494 YIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTLS 541
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 173/403 (42%), Positives = 256/403 (63%), Gaps = 24/403 (5%)
Query: 137 VDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTG 196
+ G+++P PV +F ++ D + + +++ + +PTP+Q P+++ GRDL+ A+TG
Sbjct: 87 ITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETG 146
Query: 197 SGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGV 256
SGKT ++ P I + + P +A P+ L+L+PTREL+ QI EA KF + +
Sbjct: 147 SGKTLSYLLPAIVHVNAQ-----PMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKI 201
Query: 257 KVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 316
K YGG P Q+R+L++GV+I++ATPGRL+D++E +L+ + YL LDEADRMLDM
Sbjct: 202 KTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDM 261
Query: 317 GFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDLI 376
GF+PQIRKIV + RQT+ +SAT+PKE+++L+ FL N + +G S+DL
Sbjct: 262 GFDPQIRKIVSHIRPD----RQTLYWSATWPKEVEQLSKKFLYNPYKVIIG----SSDLK 313
Query: 377 AQR-----VEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVN 431
A R V+ + +S K + L+ LL E LVF++TKKG D + L ++
Sbjct: 314 ANRAIRQIVDVISESQKYNKLVKLL------EDIMDGSRILVFLDTKKGCDQITRQLRMD 367
Query: 432 GFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDD 491
G+PA IHGD++Q ER+ L F+SG +PI+ ATDVAARGLD+ V +V+N+D P ++D
Sbjct: 368 GWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLED 427
Query: 492 YVHRIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEV 534
YVHRIGRTGRAG G A FF N AK L +++QEA Q+V
Sbjct: 428 YVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKV 470
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/411 (44%), Positives = 250/411 (60%), Gaps = 19/411 (4%)
Query: 137 VDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTG 196
+ SG VPPP+ +F L + L + + + P+P+Q + PI++ RD++A A+TG
Sbjct: 149 ITVSGGQVPPPLMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTG 208
Query: 197 SGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGV 256
SGKT + P G M ++QR P L+LSPTREL+ QI EA KF + +
Sbjct: 209 SGKTLGYLIP---GFM---HLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKI 262
Query: 257 KVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 316
YGGAP QL+E+ERGVDI+VATPGRL D+LE R+SL + YL LDEADRMLDM
Sbjct: 263 SCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDM 322
Query: 317 GFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGS--STD 374
GFEPQIRKIV ++ P RQT++++AT+PKE++++A+D L N + +G V +
Sbjct: 323 GFEPQIRKIVNEV----PTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANK 378
Query: 375 LIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFP 434
I Q +E + +K S L +L +Q ++F TK+ D L L F
Sbjct: 379 SITQTIEVLAPMEKHSRLEQILRSQEPGSKI------IIFCSTKRMCDQLARNLTRT-FG 431
Query: 435 ATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVH 494
A IHGD++Q ER+ L F+SG TP+LVATDVAARGLD+ + VVN+D PN ++DYVH
Sbjct: 432 AAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVH 491
Query: 495 RIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLTRYAAKA 545
RIGRTGRAG GLA FF + + A L +++ ANQ+VP + A +
Sbjct: 492 RIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQVREMATRG 542
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 335 bits (858), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 181/411 (44%), Positives = 249/411 (60%), Gaps = 19/411 (4%)
Query: 137 VDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTG 196
+ SG VPPP+ +F L + + + PTP+Q + PI++ GRD++A A+TG
Sbjct: 146 ITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTG 205
Query: 197 SGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGV 256
SGKT + P G + ++QR R P L+LSPTREL+ QI +EA KF + +
Sbjct: 206 SGKTLGYLIP---GFL---HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRI 259
Query: 257 KVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 316
YGGAP QLR+LERG DI+VATPGRL D+LE R+SL+ I YL LDEADRMLDM
Sbjct: 260 SCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDM 319
Query: 317 GFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGS--STD 374
GFEPQIRKIV+++ P RQT++++AT+PK ++++A+D L N + +G V +
Sbjct: 320 GFEPQIRKIVKEI----PTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANK 375
Query: 375 LIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFP 434
I Q +E V +K+ L +L +Q ++F TK+ D L L F
Sbjct: 376 SITQHIEVVAPMEKQRRLEQILRSQEPGSK------VIIFCSTKRMCDQLTRNLTRQ-FG 428
Query: 435 ATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVH 494
A IHGD++Q ER+ L F+SG TP+LVATDVAARGLD+ + VVN+D PN ++DYVH
Sbjct: 429 AAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVH 488
Query: 495 RIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLTRYAAKA 545
RIGRTGRAG G A FF + + A L +++ ANQ VP + A +
Sbjct: 489 RIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRG 539
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 335 bits (858), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 181/411 (44%), Positives = 249/411 (60%), Gaps = 19/411 (4%)
Query: 137 VDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTG 196
+ SG VPPP+ +F L + + + PTP+Q + PI++ GRD++A A+TG
Sbjct: 146 ITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTG 205
Query: 197 SGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGV 256
SGKT + P G + ++QR R P L+LSPTREL+ QI +EA KF + +
Sbjct: 206 SGKTLGYLIP---GFL---HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRI 259
Query: 257 KVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 316
YGGAP QLR+LERG DI+VATPGRL D+LE R+SL+ I YL LDEADRMLDM
Sbjct: 260 SCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDM 319
Query: 317 GFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGS--STD 374
GFEPQIRKIV+++ P RQT++++AT+PK ++++A+D L N + +G V +
Sbjct: 320 GFEPQIRKIVKEI----PTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANK 375
Query: 375 LIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFP 434
I Q +E V +K+ L +L +Q ++F TK+ D L L F
Sbjct: 376 SITQHIEVVAPMEKQRRLEQILRSQEPGSK------VIIFCSTKRMCDQLTRNLTRQ-FG 428
Query: 435 ATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVH 494
A IHGD++Q ER+ L F+SG TP+LVATDVAARGLD+ + VVN+D PN ++DYVH
Sbjct: 429 AAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVH 488
Query: 495 RIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLTRYAAKA 545
RIGRTGRAG G A FF + + A L +++ ANQ VP + A +
Sbjct: 489 RIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRG 539
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 335 bits (858), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 181/411 (44%), Positives = 249/411 (60%), Gaps = 19/411 (4%)
Query: 137 VDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTG 196
+ SG VPPP+ +F L + + + PTP+Q + PI++ GRD++A A+TG
Sbjct: 146 ITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTG 205
Query: 197 SGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGV 256
SGKT + P G + ++QR R P L+LSPTREL+ QI +EA KF + +
Sbjct: 206 SGKTLGYLIP---GFL---HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRI 259
Query: 257 KVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 316
YGGAP QLR+LERG DI+VATPGRL D+LE R+SL+ I YL LDEADRMLDM
Sbjct: 260 SCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDM 319
Query: 317 GFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGS--STD 374
GFEPQIRKIV+++ P RQT++++AT+PK ++++A+D L N + +G V +
Sbjct: 320 GFEPQIRKIVKEI----PTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANK 375
Query: 375 LIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFP 434
I Q +E V +K+ L +L +Q ++F TK+ D L L F
Sbjct: 376 SITQHIEVVAPMEKQRRLEQILRSQEPGSK------VIIFCSTKRMCDQLTRNLTRQ-FG 428
Query: 435 ATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVH 494
A IHGD++Q ER+ L F+SG TP+LVATDVAARGLD+ + VVN+D PN ++DYVH
Sbjct: 429 AAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVH 488
Query: 495 RIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLTRYAAKA 545
RIGRTGRAG G A FF + + A L +++ ANQ VP + A +
Sbjct: 489 RIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRG 539
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 335 bits (858), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 181/411 (44%), Positives = 249/411 (60%), Gaps = 19/411 (4%)
Query: 137 VDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTG 196
+ SG VPPP+ +F L + + + PTP+Q + PI++ GRD++A A+TG
Sbjct: 146 ITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTG 205
Query: 197 SGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGV 256
SGKT + P G + ++QR R P L+LSPTREL+ QI +EA KF + +
Sbjct: 206 SGKTLGYLIP---GFL---HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRI 259
Query: 257 KVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 316
YGGAP QLR+LERG DI+VATPGRL D+LE R+SL+ I YL LDEADRMLDM
Sbjct: 260 SCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDM 319
Query: 317 GFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGS--STD 374
GFEPQIRKIV+++ P RQT++++AT+PK ++++A+D L N + +G V +
Sbjct: 320 GFEPQIRKIVKEI----PTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANK 375
Query: 375 LIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFP 434
I Q +E V +K+ L +L +Q ++F TK+ D L L F
Sbjct: 376 SITQHIEVVAPMEKQRRLEQILRSQEPGSK------VIIFCSTKRMCDQLTRNLTRQ-FG 428
Query: 435 ATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVH 494
A IHGD++Q ER+ L F+SG TP+LVATDVAARGLD+ + VVN+D PN ++DYVH
Sbjct: 429 AAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVH 488
Query: 495 RIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLTRYAAKA 545
RIGRTGRAG G A FF + + A L +++ ANQ VP + A +
Sbjct: 489 RIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATRG 539
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 176/402 (43%), Positives = 242/402 (60%), Gaps = 19/402 (4%)
Query: 146 PPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCF 205
PP F + A + + + P+P+Q + PI++ RD++A A+TGSGKT +
Sbjct: 226 PPAAGFNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLI 285
Query: 206 PIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGA 265
P G M ++QR P L+LSPTREL+ QI EA KF + + YGGA
Sbjct: 286 P---GFM---HLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGA 339
Query: 266 PITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKI 325
P QL+E+ERGVDI+VATPGRL D+LE R+SL + YL LDEADRMLDMGFEPQIRKI
Sbjct: 340 PKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKI 399
Query: 326 VEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGS--STDLIAQRVEYV 383
V ++ P RQT++++AT+PKE++++A+D L N + +G V + I Q +E +
Sbjct: 400 VNEV----PTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVL 455
Query: 384 LDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRT 443
+K S L +L +Q ++F TK+ D L L F A IHGD++
Sbjct: 456 APMEKHSRLEQILRSQEPGSKI------IIFCSTKRMCDQLARNL-TRTFGAAAIHGDKS 508
Query: 444 QQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAG 503
Q ER+ L F+SG TP+LVATDVAARGLD+ + VVN+D PN ++DYVHRIGRTGRAG
Sbjct: 509 QAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAG 568
Query: 504 KMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLTRYAAKA 545
GLA FF + + A L +++ ANQ+VP + A +
Sbjct: 569 ATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQVREMATRG 610
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 177/401 (44%), Positives = 241/401 (60%), Gaps = 19/401 (4%)
Query: 137 VDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTG 196
V T+GEN+P P TF L + + + + PTP+Q PI+L RD++A A+TG
Sbjct: 423 VTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTG 482
Query: 197 SGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGV 256
SGKT + P ++ R P LIL+PTREL+ QI DEA +F + +
Sbjct: 483 SGKTLGYLIPAFI------LLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRI 536
Query: 257 KVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 316
YGGAP QL+ELERG DI+VATPGRL D+LE + Q + L LDEADRMLDM
Sbjct: 537 SCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDM 596
Query: 317 GFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVG--SSTD 374
GFEPQIRKIV ++ P RQT++++AT+PKE++++ASD L N V + +GRV ++
Sbjct: 597 GFEPQIRKIVNEI----PPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANK 652
Query: 375 LIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFP 434
I Q VE V +K L +L +Q ++F TK+ D L + + F
Sbjct: 653 AITQYVEVVPQMEKERRLEQILRSQERGSK------VIIFCSTKRLCDHLARSVGRH-FG 705
Query: 435 ATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVH 494
A IHGD+TQ ER+ L F+SG + +L+ATDVAARGLDI + V+N+D P ++DYVH
Sbjct: 706 AVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVH 765
Query: 495 RIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVP 535
RIGRTGRAG G+A FF E + A L +++ ANQ+VP
Sbjct: 766 RIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVP 806
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 312 bits (799), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 166/424 (39%), Positives = 253/424 (59%), Gaps = 22/424 (5%)
Query: 133 DDIPVDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMAC 192
+D + G +P P+ ++ E L L + ++R Y KP+P+Q AIP+ L RD++
Sbjct: 297 EDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGI 356
Query: 193 AQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSY 252
A+TGSGKTAAF P+++ I R + T P A++++PTREL+ QI +E KF++
Sbjct: 357 AETGSGKTAAFVLPMLAYISRLPPMSEEN--ETEGPYAVVMAPTRELAQQIEEETVKFAH 414
Query: 253 QTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 312
G +V GG I +Q ++ +G +I++ATPGRL+D LER L Y+ LDEADR
Sbjct: 415 YLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 474
Query: 313 MLDMGFEPQIRKIVEQM---DMPPPGM----------RQTMLFSATFPKEIQRLASDFLA 359
M+DMGFEPQ+ +++ M ++ P R T +FSAT P ++RLA +L
Sbjct: 475 MIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLR 534
Query: 360 NYVFLAVGRVGSSTDLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKK 419
N V + +G G +TDLI+Q V + +S+K L LL + G++ +VFV TKK
Sbjct: 535 NPVVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLL------DELGEK-TAIVFVNTKK 587
Query: 420 GADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSH 479
D++ L G+ T +HG ++Q++RE++L F++ +LVATDV RG+DIP V+H
Sbjct: 588 NCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAH 647
Query: 480 VVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLT 539
V+N+D+P I+ Y HRIGRTGRAGK G+AT+F + + L ++ ++N VP L
Sbjct: 648 VINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQSNSAVPPELA 707
Query: 540 RYAA 543
R+ A
Sbjct: 708 RHEA 711
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 304 bits (779), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 174/410 (42%), Positives = 245/410 (59%), Gaps = 17/410 (4%)
Query: 137 VDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTG 196
+ SG +V PV TF + + I++ Y KPT +Q A+PI L+GRD++ A+TG
Sbjct: 216 IRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTG 275
Query: 197 SGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGV 256
SGKTAAF P+I IM +P + R P+ +I +PTREL+ QI EAKKFS G+
Sbjct: 276 SGKTAAFVLPMIVHIM-----DQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGL 330
Query: 257 KVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 316
+V YGG +Q +EL+ G +I+VATPGRL+D+L+ +++ YL LDEADRM D+
Sbjct: 331 RVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDL 390
Query: 317 GFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDLI 376
GFEPQ+R IV Q+ P RQT+LFSAT P ++++LA + L++ + + VG VG + + I
Sbjct: 391 GFEPQVRSIVGQI-RPD---RQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDI 446
Query: 377 AQRVEYV-LDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPA 435
Q V + D++K L++ L + +G LVF K D +E L +N F
Sbjct: 447 TQVVNVIPSDAEKLPWLLEKLPGMID------EGDVLVFASKKATVDEIEAQLTLNSFKV 500
Query: 436 TCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHR 495
+HGD+ Q R L+ FKSG +L+ATDVAARGLDI + VVN+D+ D+D +VHR
Sbjct: 501 AALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHR 560
Query: 496 IGRTGRAG-KMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLTRYAAK 544
IGRTGRAG + G+A + A L + + A Q VP LT A K
Sbjct: 561 IGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQNVPPELTDLAMK 610
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 159/412 (38%), Positives = 244/412 (59%), Gaps = 18/412 (4%)
Query: 134 DIPVDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACA 193
++ + G++VP P+ + + L + +++ Y KP P+Q A+PI ++GRD + A
Sbjct: 514 ELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVA 573
Query: 194 QTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQ 253
+TGSGKT F P++ I +P V P+ L+++PTREL QIH + +KFS
Sbjct: 574 KTGSGKTLGFVLPMLRHIK-----DQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKP 628
Query: 254 TGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERAR---VSLQMIRYLALDEA 310
G++ V YGG+ + QQ+ EL+RG +I+V TPGR++D+L + +L+ + +L +DEA
Sbjct: 629 LGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEA 688
Query: 311 DRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVG 370
DRM DMGFEPQI +I++ + P RQT+LFSATFP++++ LA L V + VG
Sbjct: 689 DRMFDMGFEPQITRIIQNI-RPE---RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRS 744
Query: 371 SSTDLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCV 430
I Q VE +SD+ L++LL + ++G LVFV++++ DAL +
Sbjct: 745 VVNKDITQLVEVRPESDRFLRLLELLGE------WSEKGKILVFVQSQEKCDALYRDMIK 798
Query: 431 NGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDID 490
+ +P +HG + Q +RE + FK+ +L+AT VAARGLD+ + VVNFD PN +
Sbjct: 799 SSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYE 858
Query: 491 DYVHRIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLTRYA 542
DYVHR+GRTGRAG+ G A F +E + A L ++ + Q VP L A
Sbjct: 859 DYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDLKALA 910
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 295 bits (755), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 158/412 (38%), Positives = 243/412 (58%), Gaps = 18/412 (4%)
Query: 134 DIPVDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACA 193
++ + G++VP P+ + + L + +++ Y KP P+Q A+PI ++GRD + A
Sbjct: 176 ELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVA 235
Query: 194 QTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQ 253
+TGSGKT F P++ I +P V P+ L+++PTREL QIH + +KFS
Sbjct: 236 KTGSGKTLGFVLPMLRHIK-----DQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKP 290
Query: 254 TGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERAR---VSLQMIRYLALDEA 310
G++ V YGG+ + QQ+ EL+RG +I+V TPGR++D+L + +L+ + +L +DEA
Sbjct: 291 LGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEA 350
Query: 311 DRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVG 370
DRM DMGFEPQI +I++ + RQT+LFSATFP++++ LA L V + VG
Sbjct: 351 DRMFDMGFEPQITRIIQNIRPE----RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRS 406
Query: 371 SSTDLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCV 430
I Q VE +SD+ L++LL + ++G LVFV++++ DAL +
Sbjct: 407 VVNKDITQLVEVRPESDRFLRLLELLGE------WSEKGKILVFVQSQEKCDALYRDMIK 460
Query: 431 NGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDID 490
+ +P +HG + Q +RE + FK+ +L+AT VAARGLD+ + VVNFD PN +
Sbjct: 461 SSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYE 520
Query: 491 DYVHRIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLTRYA 542
DYVHR+GRTGRAG+ G A F +E + A L ++ + Q VP L A
Sbjct: 521 DYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDLKALA 572
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/409 (38%), Positives = 242/409 (59%), Gaps = 21/409 (5%)
Query: 137 VDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTG 196
+ +G+++PPP+ F ++ + ++ V+PTP+Q +P+ LAGRD++ A TG
Sbjct: 134 IIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTG 193
Query: 197 SGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFS---YQ 253
SGKT F P+I ++E+ + +A P+ LI+ P+REL+ Q ++ ++F +
Sbjct: 194 SGKTLVFVLPMIMIALQEEMMMP--IAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVE 251
Query: 254 TG---VKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEA 310
G ++ ++ GG + QL ++RGV I+VATPGRL D+L + ++SL RYL LDEA
Sbjct: 252 AGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEA 311
Query: 311 DRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVG 370
DR++D+GFE IR++ + RQT+LFSAT P +IQ A L V + VGR G
Sbjct: 312 DRLVDLGFEDDIREVFDHFK----SQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAG 367
Query: 371 SSTDLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCV 430
++ + Q VEYV K +L++ L L+F E K D + L +
Sbjct: 368 AANLDVIQEVEYVKQEAKIVYLLECLQKTSPP--------VLIFCENKADVDDIHEYLLL 419
Query: 431 NGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDID 490
G A IHG + Q++RE A+ SFK+G +LVATDVA++GLD P + HV+N+D+P +I+
Sbjct: 420 KGVEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIE 479
Query: 491 DYVHRIGRTGRAGKMGLATAFFNEG-NLSMAKPLADLMQEANQEVPAWL 538
+YVHRIGRTGR GK G+AT F N+ + + L L+QEA Q +P L
Sbjct: 480 NYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVL 528
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 158/409 (38%), Positives = 241/409 (58%), Gaps = 21/409 (5%)
Query: 137 VDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTG 196
+ +GE++PPP+ F ++ L + ++ + PTP+Q +P+ L+GRD++ A TG
Sbjct: 85 ITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTG 144
Query: 197 SGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFS---YQ 253
SGKT F P+I ++E+ I P +A P+AL++ P+REL+ Q +D ++F +
Sbjct: 145 SGKTLVFVLPMIILALQEE-IMMP-IAAGEGPIALVICPSRELAKQTYDVVEQFVASLVE 202
Query: 254 TG---VKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEA 310
G ++ ++ GG + QL +++GV I+VATPGRL D+L + ++SL R L LDEA
Sbjct: 203 DGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEA 262
Query: 311 DRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVG 370
DR++D+GFE IR + + RQT+LFSAT P +IQ A+ L V + VGR G
Sbjct: 263 DRLVDLGFEDDIRHVFDHFK----SQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAG 318
Query: 371 SSTDLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCV 430
++ + Q VEYV K +L++ L L+F E K D + L +
Sbjct: 319 AANLDVIQEVEYVKQEAKIVYLLECLQKTTPP--------VLIFCENKADVDDIHEYLLL 370
Query: 431 NGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDID 490
G A IHG + Q++R+ A+ FK+G +LVATDVA++GLD P + HV+N+D+P +I+
Sbjct: 371 KGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIE 430
Query: 491 DYVHRIGRTGRAGKMGLATAFFNEGNLSMA-KPLADLMQEANQEVPAWL 538
+YVHRIGRTGR GK G+AT F N+ + L L+QEA Q +P L
Sbjct: 431 NYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVL 479
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 215/341 (63%), Gaps = 24/341 (7%)
Query: 137 VDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTG 196
+ G +VP P+ F + + D + + I + + +PTP+Q P++L GRDL+ A+TG
Sbjct: 153 ISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETG 212
Query: 197 SGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGV 256
SGKT A+ P + + + PR+ + P+ LIL+PTREL+ QI +E++KF ++GV
Sbjct: 213 SGKTLAYLLPALVHVSAQ-----PRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGV 267
Query: 257 KVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 316
+ YGGAP Q+R+L RGV+I++ATPGRL+D+LE +L+ + YL LDEADRMLDM
Sbjct: 268 RSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDM 327
Query: 317 GFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDL- 375
GFEPQIRKIV Q+ RQT+L+SAT+P+E++ LA FL + +G STDL
Sbjct: 328 GFEPQIRKIVSQIRPD----RQTLLWSATWPREVETLARQFLRDPYKAIIG----STDLK 379
Query: 376 ----IAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVN 431
I Q +E V +K + L+ LL + L+FVETK+G D + L ++
Sbjct: 380 ANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKI------LIFVETKRGCDQVTRQLRMD 433
Query: 432 GFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGL 472
G+PA IHGD+TQ ER+ L FKSG +PI+ ATDVAARGL
Sbjct: 434 GWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGL 474
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/402 (40%), Positives = 234/402 (58%), Gaps = 23/402 (5%)
Query: 148 VNTFAEIDLGDALNQNIQRC--KYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCF 205
+ TFAE +L +N+ C + KP+P+Q + P L GRDL+ A+TGSGKT AF
Sbjct: 115 LKTFAESNL----PENVLDCCKTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGI 170
Query: 206 PIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGA 265
P I ++++ + ++ P L+LSPTREL+ QI D ++ G+K + YGG+
Sbjct: 171 PAIMHVLKKNK-KIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGS 229
Query: 266 PITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKI 325
Q+ + GVDI++ TPGRL DL+E + L + ++ LDEADRMLDMGFE +R I
Sbjct: 230 SKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFI 289
Query: 326 VEQMDMPPPGMRQTMLFSATFPKEIQRLASDFL-ANYVFLAVGRVGSSTDLIAQRVEYVL 384
+ + +RQ ++FSAT+P ++ +LA +F+ N + + +G V + + ++ VL
Sbjct: 290 LSNTNK----VRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVL 345
Query: 385 DSDKRSH----LMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHG 440
D R L++ H ++N LVF K A+ LE L G+ A IHG
Sbjct: 346 DERARDQRLIALLEKYHKSQKNRV-------LVFALYKVEAERLERFLQQRGWKAVSIHG 398
Query: 441 DRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTG 500
++ Q ER +L FK G P+LVATDVAARGLDIP V V+N+ P +DYVHRIGRTG
Sbjct: 399 NKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTG 458
Query: 501 RAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLTRYA 542
RAGK G+A FF N +A L ++++EA Q VPA L ++
Sbjct: 459 RAGKKGVAHTFFTPLNKGLAGELVNVLREAGQVVPADLLKFG 500
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 152/405 (37%), Positives = 227/405 (56%), Gaps = 47/405 (11%)
Query: 134 DIPVDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACA 193
++ + G++VP P+ + + L + +++ Y KP P+Q A+PI ++GRD + A
Sbjct: 381 ELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVA 440
Query: 194 QTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQ 253
+TGSGKT F P++ I +P V P+ L+++PTREL QI+ + +KFS
Sbjct: 441 KTGSGKTLGFVLPMLRHIK-----DQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKA 495
Query: 254 TGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERAR---VSLQMIRYLALDEA 310
G+ V YGG+ + QQ+ EL+RG +I+V TPGR++D+L + +L+ + YL +DEA
Sbjct: 496 LGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEA 555
Query: 311 DRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVG 370
DRM DMGFEPQI +IV+ ++ P RQT+LFSATFP++++ LA L V + VG
Sbjct: 556 DRMFDMGFEPQITRIVQ--NIRPD--RQTVLFSATFPRQVETLARKVLNKPVEIQVGGRS 611
Query: 371 SSTDLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCV 430
I Q VE +S++ S L++LL E +G LVFV ++
Sbjct: 612 VVNKDITQLVEIRPESERFSRLLELLGEWYE------KGKVLVFVRSQ------------ 653
Query: 431 NGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDID 490
E ++ FKS +L+AT VAARGLD+ + VVNFD PN +
Sbjct: 654 -----------------EKSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYE 696
Query: 491 DYVHRIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVP 535
DYVHR+GRTGRAG+ G A F +E + A L ++ + Q VP
Sbjct: 697 DYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVP 741
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 220/412 (53%), Gaps = 13/412 (3%)
Query: 134 DIPVDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACA 193
DI V G VPPPV TF L L N++ Y PTP+Q AIP +L G+ L+A A
Sbjct: 95 DIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASA 154
Query: 194 QTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQ 253
TGSGKTA+F PIIS + + P R P+A++L+PTREL Q+ D+AK
Sbjct: 155 DTGSGKTASFLVPIISRCT-TYHSEHPSDQRRN-PLAMVLAPTRELCVQVEDQAKMLGKG 212
Query: 254 TGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRM 313
K + GG P++ QL +++GV++++ TPGR+VDLL + + L I LDE D M
Sbjct: 213 LPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCM 272
Query: 314 LDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSST 373
L GF Q+ +I + + P Q +LFSAT +E++++ + +++G
Sbjct: 273 LQRGFRDQVMQIFQALSQP-----QVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPN 327
Query: 374 DLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCL-CVNG 432
+ Q +V K+ L D+L +Q + +V+V ++ GAD L + + V G
Sbjct: 328 KAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPA-----VVYVSSRVGADLLANAITVVTG 382
Query: 433 FPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDY 492
A IHG++ +ER + SF G P+LV+T V RG+D+ V V+ FD+P+ I +Y
Sbjct: 383 VKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEY 442
Query: 493 VHRIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLTRYAAK 544
+H IGR R G+ G A F NE + ++ L ++ + +P L ++
Sbjct: 443 IHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKELINLTSR 494
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 220/412 (53%), Gaps = 13/412 (3%)
Query: 134 DIPVDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACA 193
DI V G VPPPV TF L L N++ Y PTP+Q AIP +L G+ L+A A
Sbjct: 95 DIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASA 154
Query: 194 QTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQ 253
TGSGKTA+F PIIS + + P R P+A++L+PTREL Q+ D+AK
Sbjct: 155 DTGSGKTASFLVPIISRCT-TYHSEHPSDQRRN-PLAMVLAPTRELCVQVEDQAKMLGKG 212
Query: 254 TGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRM 313
K + GG P++ QL +++GV++++ TPGR+VDLL + + L I LDE D M
Sbjct: 213 LPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCM 272
Query: 314 LDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSST 373
L GF Q+ +I + + P Q +LFSAT +E++++ + +++G
Sbjct: 273 LQRGFRDQVMQIFQALSQP-----QVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPN 327
Query: 374 DLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCL-CVNG 432
+ Q +V K+ L D+L +Q + +V+V ++ GAD L + + V G
Sbjct: 328 KAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPA-----VVYVSSRVGADLLANAITVVTG 382
Query: 433 FPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDY 492
A IHG++ +ER + SF G P+LV+T V RG+D+ V V+ FD+P+ I +Y
Sbjct: 383 VKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEY 442
Query: 493 VHRIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLTRYAAK 544
+H IGR R G+ G A F NE + ++ L ++ + +P L ++
Sbjct: 443 IHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKELINLTSR 494
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/395 (38%), Positives = 215/395 (54%), Gaps = 41/395 (10%)
Query: 172 PTPVQRY--AIPISLAGRDLMACAQTGSGKTAAFCFPIISGI-----MREQYIQRPRVAR 224
P P++ + IP+ L RD++ + TGSGKTAAF P+++ I MRE+ +
Sbjct: 223 PHPMRNWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREE-------NQ 275
Query: 225 TAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVAT 284
T P AL++ PTREL+ QI +E KFS G K V G I +Q +L +G +I++AT
Sbjct: 276 TEGPYALVMVPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIAT 335
Query: 285 PGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGM-------- 336
PGRL+D LER V L YL LDEADRM+DM FEPQ+ ++++ MP +
Sbjct: 336 PGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDV--MPCSNLKPEKEDEE 393
Query: 337 -------RQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDLIAQRVEYVLDSDKR 389
R T +FSAT ++RLA FL N V + +G +T I Q+V +SDK
Sbjct: 394 LEEKKIYRTTYMFSATMLLSVERLARKFLRNPVVVT---IGETTKFITQQVIMTKESDKF 450
Query: 390 SHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCL-CVNGFPATCIHGDRTQQERE 448
S L L+ + G +VFV T+ D + L V T +H ++Q++R+
Sbjct: 451 SRLKKLI------DDLGDDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRD 504
Query: 449 MALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLA 508
+L FK +LV TDV RGLDI ++ V+N+D+PN +D Y HRIGRTGRAGK G+A
Sbjct: 505 YSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVA 564
Query: 509 TAFFNEGNLSMAKPLADLMQEANQEVPAWLTRYAA 543
T F + + L + E N VP L R+ A
Sbjct: 565 TTFLTLEDKDVFYGLKQKLNECNSLVPPELARHEA 599
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 150/399 (37%), Positives = 223/399 (55%), Gaps = 26/399 (6%)
Query: 119 VGEQENTGINFEAYDDIPVDTSGENVPPPVN---TFAEIDLGDALNQNIQRCKYVKPTPV 175
+ E+ + +D+ +D NV +++ L L +++++ P+
Sbjct: 69 LSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPI 128
Query: 176 QRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRE--QYIQRPRVARTAFPMALIL 233
QR + +L GRD++A A+TG+GKT AF PII + E Y R R P L+L
Sbjct: 129 QRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGR--LPKFLVL 186
Query: 234 SPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLE 293
+PTREL+ Q+ E K+ + + V YGG T Q L RGVD++V TPGR++DL+E
Sbjct: 187 APTRELAKQVEKEIKESAPY--LSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIE 244
Query: 294 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRL 353
+ L + YL LDEAD+ML +GFE + I+E + P RQ+MLFSAT P +++L
Sbjct: 245 GRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENL----PTKRQSMLFSATMPTWVKKL 300
Query: 354 ASDFLANYVFLAVGRVGSSTDLIAQRVEY----VLDSDKRSHLMDLLHAQRENETFGKQG 409
A +L N L + VG + +A+ ++ + KR+ L DL+ + K G
Sbjct: 301 ARKYLDNP--LNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLI------TVYAKGG 352
Query: 410 LTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAA 469
T+VF +TK+ AD + L N +HGD +Q +RE L +F+ G +LVATDVA+
Sbjct: 353 KTIVFTQTKRDADEVSLALS-NSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVAS 411
Query: 470 RGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLA 508
RGLDIP V V++++LPND + +VHR GRTGRAGK G A
Sbjct: 412 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSA 450
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 150/399 (37%), Positives = 223/399 (55%), Gaps = 26/399 (6%)
Query: 119 VGEQENTGINFEAYDDIPVDTSGENVPPPVN---TFAEIDLGDALNQNIQRCKYVKPTPV 175
+ E+ + +D+ +D NV +++ L L +++++ P+
Sbjct: 69 LSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPI 128
Query: 176 QRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRE--QYIQRPRVARTAFPMALIL 233
QR + +L GRD++A A+TG+GKT AF PII + E Y R R P L+L
Sbjct: 129 QRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGR--LPKFLVL 186
Query: 234 SPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLE 293
+PTREL+ Q+ E K+ + + V YGG T Q L RGVD++V TPGR++DL+E
Sbjct: 187 APTRELAKQVEKEIKESAPY--LSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIE 244
Query: 294 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRL 353
+ L + YL LDEAD+ML +GFE + I+E + P RQ+MLFSAT P +++L
Sbjct: 245 GRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENL----PTKRQSMLFSATMPTWVKKL 300
Query: 354 ASDFLANYVFLAVGRVGSSTDLIAQRVEY----VLDSDKRSHLMDLLHAQRENETFGKQG 409
A +L N L + VG + +A+ ++ + KR+ L DL+ + K G
Sbjct: 301 ARKYLDNP--LNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLI------TVYAKGG 352
Query: 410 LTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAA 469
T+VF +TK+ AD + L N +HGD +Q +RE L +F+ G +LVATDVA+
Sbjct: 353 KTIVFTQTKRDADEVSLALS-NSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVAS 411
Query: 470 RGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLA 508
RGLDIP V V++++LPND + +VHR GRTGRAGK G A
Sbjct: 412 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSA 450
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 136/347 (39%), Positives = 209/347 (60%), Gaps = 21/347 (6%)
Query: 171 KPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMA 230
K P+Q+ + ++ GRD++ A+TG+GKT AF PII I++ + R P+
Sbjct: 126 KLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYN----AKHGRGRNPLC 181
Query: 231 LILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVD 290
L+L+PTREL+ Q+ E ++ + + + YGG PI QQ+R+L+ GVD+ V TPGR++D
Sbjct: 182 LVLAPTRELARQVEKEFRESA--PSLDTICLYGGTPIGQQMRQLDYGVDVAVGTPGRVID 239
Query: 291 LLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEI 350
L++R ++L ++++ LDEAD+ML +GF + I+E++ P RQ+M+FSAT P I
Sbjct: 240 LMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL----PEKRQSMMFSATMPSWI 295
Query: 351 QRLASDFLANYVFLAVGRVGSSTDLIAQRV---EYVLDSDKRSHLMDLLHAQRENETFGK 407
+ L +L N L V VG S +A + + DS R+ ++ L + K
Sbjct: 296 RSLTKKYLNNP--LTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLVTEH-----AK 348
Query: 408 QGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDV 467
G +VF +TK+ AD L + L F +HGD +Q +RE L F+ GH ILVATDV
Sbjct: 349 GGKCIVFTQTKRDADRLSYALA-RSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDV 407
Query: 468 AARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNE 514
AARGLD+P V +++++LPN+ + +VHR GRTGRAGK G A +++
Sbjct: 408 AARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQ 454
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/392 (36%), Positives = 215/392 (54%), Gaps = 14/392 (3%)
Query: 148 VNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPI 207
V TFAE+ + + L + +R + P+ +Q A+P +L G+D++ AQTGSGKT AF PI
Sbjct: 8 VKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPI 67
Query: 208 ISGIMREQYIQRPRVARTAFP--MALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGA 265
+ ++ Y P+ R P A +LSPTREL+ QI ++ + ++ V GG
Sbjct: 68 LQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGI 127
Query: 266 PITQQLRELERGVDILVATPGRLVDLLERAR-VSLQMIRYLALDEADRMLDMGFEPQIRK 324
QQ L + ++VATPGRL D + + SL+ ++YL LDEADR+L+ FE + +
Sbjct: 128 DRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQ 187
Query: 325 IVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDLIAQRVEYVL 384
I+E++ P R+T LFSAT K++++L L N V + S+ D + Q+ +V
Sbjct: 188 ILEEI----PLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVA 243
Query: 385 DSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQ 444
K +L+ +L E+ + ++F T G L L GF A I G TQ
Sbjct: 244 AKYKDCYLVYILSEMPESTS-------MIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQ 296
Query: 445 QEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGK 504
+R AL FK+G ILV TDVA+RGLDIP V V+N+D+P + DY+HR+GRT RAG+
Sbjct: 297 SKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGR 356
Query: 505 MGLATAFFNEGNLSMAKPLADLMQEANQEVPA 536
G+ + N+ L + L+ + E PA
Sbjct: 357 SGVGISLVNQYELEWYIQIEKLIGKKLPEYPA 388
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/366 (37%), Positives = 210/366 (57%), Gaps = 21/366 (5%)
Query: 174 PVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALIL 233
P+Q+ + ++ GRD++ A+TG+GKT AF PII I++ + R P L+L
Sbjct: 141 PIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKFN----AKHGRGKNPQCLVL 196
Query: 234 SPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLE 293
+PTREL+ Q+ E ++ + + + YGG PI QQ+REL G+D+ V TPGR++DL++
Sbjct: 197 APTRELARQVEKEFRESA--PSLDTICLYGGTPIGQQMRELNYGIDVAVGTPGRIIDLMK 254
Query: 294 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRL 353
R ++L ++++ LDEAD+ML +GF + I++++ P RQ+M+FSAT P I+ L
Sbjct: 255 RGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKL----PAKRQSMMFSATMPSWIRSL 310
Query: 354 ASDFLANYVFLAVGRVGSSTDLIAQRV---EYVLDSDKRSHLMDLLHAQRENETFGKQGL 410
+L N L + VG S +A + DS R+ ++ L + GK G
Sbjct: 311 TKKYLNNP--LTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEH-----GKGGK 363
Query: 411 TLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAAR 470
+VF +TK+ AD L L + +HGD +Q +RE L F+ G+ ILVATDVAAR
Sbjct: 364 CIVFTQTKRDADRLAFGLA-KSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAAR 422
Query: 471 GLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEA 530
GLD+P V V++++LPN+ + +VHR GRTGRAGK G A + K + +
Sbjct: 423 GLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSR 482
Query: 531 NQEVPA 536
E+P+
Sbjct: 483 FNELPS 488
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/332 (42%), Positives = 197/332 (59%), Gaps = 23/332 (6%)
Query: 183 SLAGRDLMACAQTGSGKTAAFCFPIISGIMRE--QYIQRPRVARTAFPMALILSPTRELS 240
+L GRD++A A+TG+GKT AF PII + E Y R R P L+L+PTREL+
Sbjct: 43 ALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGR--LPKFLVLAPTRELA 100
Query: 241 CQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQ 300
Q+ E K+ + + V YGG T Q L RGVD++V TPGR++DL+E + L
Sbjct: 101 KQVEKEIKESAPY--LSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLG 158
Query: 301 MIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLAN 360
+ YL LDEAD+ML +GFE + I+E + P RQ+MLFSAT P +++LA +L N
Sbjct: 159 EVEYLVLDEADQMLAVGFEEAVESILENL----PTKRQSMLFSATMPTWVKKLARKYLDN 214
Query: 361 YVFLAVGRVGSSTDLIAQRVEY----VLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVE 416
L + VG + +A+ ++ + KR+ L DL+ + K G T+VF +
Sbjct: 215 P--LNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLI------TVYAKGGKTIVFTQ 266
Query: 417 TKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPR 476
TK+ AD + L N +HGD +Q +RE L +F+ G +LVATDVA+RGLDIP
Sbjct: 267 TKRDADEVSLALS-NSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPN 325
Query: 477 VSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLA 508
V V++++LPND + +VHR GRTGRAGK G A
Sbjct: 326 VDLVIHYELPNDPETFVHRSGRTGRAGKEGSA 357
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/412 (32%), Positives = 216/412 (52%), Gaps = 24/412 (5%)
Query: 137 VDTSGENVPPPVNTFAEID----LGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMAC 192
+ SG N+PPP+ +FAE+ + +N+ + +PTP+QR AIPI L+GR+ AC
Sbjct: 125 IHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFAC 184
Query: 193 AQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSY 252
A TGSGKT AF P++ + R T A+ILSP REL+ Q E KK
Sbjct: 185 APTGSGKTFAFICPMLIKLKRPS---------TDGIRAVILSPARELAAQTAREGKKLI- 234
Query: 253 QTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 312
G + P+ + + D+L++TP RL ++ ++ L + YL LDE+D+
Sbjct: 235 -KGSNFHIRLMTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDK 293
Query: 313 MLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSS 372
+ + QI +V+ P +R LFSAT P ++ LA + + V + +GR ++
Sbjct: 294 LFEQSLLKQIDCVVKACSNPSI-IRS--LFSATLPDSVEELARSIMHDAVRVIIGRKNTA 350
Query: 373 TDLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNG 432
++ + Q++ + + + L A R++ L+FV++K+ A L L
Sbjct: 351 SETVKQKLVFAGSEEGK------LLALRQSFAESLNPPVLIFVQSKERAKELYDELKCEN 404
Query: 433 FPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDY 492
A IH D ERE A+ F++G +L+ATDV ARG+D ++ V+N+D P+ Y
Sbjct: 405 IRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAY 464
Query: 493 VHRIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLTRYAAK 544
+HRIGR+GRAG+ G A F+ E ++ + +A+ M + EVP+W+ K
Sbjct: 465 IHRIGRSGRAGRSGEAITFYTEQDVPFLRNIANTMMSSGCEVPSWIMSLKKK 516
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/367 (33%), Positives = 198/367 (53%), Gaps = 13/367 (3%)
Query: 179 AIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRE 238
AIP +L G+ L+A A TGSGKTA+F PIIS + + P R P+A++L+PTRE
Sbjct: 3 AIPAALTGKSLLASADTGSGKTASFLVPIISRCT-TYHSEHPSDQRRN-PLAMVLAPTRE 60
Query: 239 LSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVS 298
L Q+ D+AK K + GG P++ QL +++GV++++ TPGR+VDLL + +
Sbjct: 61 LCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIE 120
Query: 299 LQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFL 358
L I LDE D ML GF Q+ +I + + P Q +LFSAT +E++++
Sbjct: 121 LDNIMTFVLDEVDCMLQRGFRDQVMQIFQALSQP-----QVLLFSATISREVEKVGGSLA 175
Query: 359 ANYVFLAVGRVGSSTDLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETK 418
+ +++G + Q +V K+ L D+L +Q + +V+V ++
Sbjct: 176 KEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPA-----VVYVSSR 230
Query: 419 KGADALEHCL-CVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRV 477
GAD L + + V G A IHG++ +ER + SF G P+LV+T V RG+D+ V
Sbjct: 231 VGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVV 290
Query: 478 SHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPAW 537
V+ FD+P+ I +Y+H IGR R G+ G A F NE + ++ L ++ + +P
Sbjct: 291 RQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKE 350
Query: 538 LTRYAAK 544
L ++
Sbjct: 351 LINLTSR 357
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 144/381 (37%), Positives = 208/381 (54%), Gaps = 24/381 (6%)
Query: 149 NTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPII 208
+TF E++L L + + Y KPTP+Q IP++L GRDL A A TGSGKTAAF P +
Sbjct: 167 DTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTL 226
Query: 209 SGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPIT 268
E+ + RP+ R LIL+PTREL+ QIH + + T +K + GG +
Sbjct: 227 -----ERLLFRPK--RVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVR 279
Query: 269 QQLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVE 327
+Q L DI+VATPGR++D L + V L + L LDEADR+L GF +I ++V
Sbjct: 280 EQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVR 339
Query: 328 QMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVG----RVGSSTDLIAQRVEYV 383
P RQTMLFSAT +E++ L L + L+ R T+ + R+
Sbjct: 340 LC----PKRRQTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVV-RIRRT 394
Query: 384 LDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRT 443
++++ + L+ L TF + ++F TK+ A L+ + G A +HG+ T
Sbjct: 395 REANQEAVLLSLC-----TRTFKSK--VIIFSGTKQAAHRLKILFGLAGLKAAELHGNLT 447
Query: 444 QQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAG 503
Q +R +L F+ L+ATDVAARGLDI V V+N+ P +ID YVHR+GRT RAG
Sbjct: 448 QAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAG 507
Query: 504 KMGLATAFFNEGNLSMAKPLA 524
+ G A F + + S+ K +A
Sbjct: 508 REGYAVTFVTDSDRSLLKVIA 528
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 191/362 (52%), Gaps = 24/362 (6%)
Query: 164 IQRCKYV---KPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQRP 220
++ CK + KPTPVQ + +P LAGRD++ AQTGSGKTAAF PI+ + + Y
Sbjct: 70 VETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDPY---- 125
Query: 221 RVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDI 280
AL+++PTREL+ Q+ ++ K ++ V GG + Q L I
Sbjct: 126 ------GVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHI 179
Query: 281 LVATPGRLVDLLER---ARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMR 337
++ TPGR+ LLE ++L LDEADR+LD+GF+ ++R I + + P R
Sbjct: 180 VITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCL----PKSR 235
Query: 338 QTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDLIAQRVEYVLDSDKRSHLMDLLH 397
QT+LFSAT +Q L F + D + Q+ + DK + + L+H
Sbjct: 236 QTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIF---EDKDAKELYLVH 292
Query: 398 AQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSG 457
+ E G + ++FV T + L L +H +Q R AL FKSG
Sbjct: 293 ILSQMEDKGIRS-AMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSG 351
Query: 458 HTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNL 517
PIL+ATDVA+RGLDIP V V+N+D+P D DYVHR+GRT RAG+ GLA + E ++
Sbjct: 352 KVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDV 411
Query: 518 SM 519
+
Sbjct: 412 KL 413
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 206/390 (52%), Gaps = 22/390 (5%)
Query: 147 PVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFP 206
P+ +F ++ + + + + + + KP+ +Q+ A+ L GRD++A AQ+G+GKT+
Sbjct: 33 PITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALS 92
Query: 207 IISGI-MREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGA 265
+ + + +Q ALILSPTREL+ Q + ++ GG
Sbjct: 93 VCQVVDTSSREVQ-----------ALILSPTRELATQTEKTIQAIGLHANIQAHACIGGN 141
Query: 266 PITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKI 325
+ + +R+LE GV ++ TPGR+ D+++R + + I+ L LDE+D ML GF+ QI +
Sbjct: 142 SVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDV 201
Query: 326 VEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDLIAQRVEYVLD 385
+ PP + Q L SAT P EI + S F+ V + V R + + I Q + +
Sbjct: 202 YRYL---PPDL-QVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQ---FFVA 254
Query: 386 SDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQ 445
+K D L + T + ++F TK+ D L + + F + +HGD Q+
Sbjct: 255 VEKEEWKFDTLCDLYDTLTITQ---AVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQK 311
Query: 446 EREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKM 505
ER+ + F+SG + +L+ TDV ARG+D+ +VS V+N+DLPN+ + Y+HRIGR+GR G+
Sbjct: 312 ERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRK 371
Query: 506 GLATAFFNEGNLSMAKPLADLMQEANQEVP 535
G+A F ++ + + + E+P
Sbjct: 372 GVAINFVKSDDIKILRDIEQYYSTQIDEMP 401
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 209/396 (52%), Gaps = 26/396 (6%)
Query: 147 PVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFP 206
P+ +F ++ + D + + + Y KP+ +Q+ A+ L GRD++A AQ+G+GKT+
Sbjct: 20 PIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAIS 79
Query: 207 IISGI-MREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGA 265
+ + + + +Q L+LSP+REL+ Q + T ++ GG
Sbjct: 80 VCQIVNISSRKVQ-----------VLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGK 128
Query: 266 PITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKI 325
I + +++LERGV + TPGR+ D+++R + + ++ L LDE+D ML G + QI +
Sbjct: 129 SIGEDIKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDV 188
Query: 326 VEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDLIAQRVEYVLD 385
+ P Q L SAT P+EI + F+ + V + V + + I Q Y +D
Sbjct: 189 YRAL----PHDIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQ---YYVD 241
Query: 386 SDKRSHLMDLLHAQRENETFGKQGLT--LVFVETKKGADALEHCLCVNGFPATCIHGDRT 443
DK D L + +G+ + ++F T++ D L + + F + +HGD+
Sbjct: 242 VDKEEWKFDTL-----CDLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKR 296
Query: 444 QQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAG 503
Q+ER+ + F+S + +L+A+DV ARG+D+ VSHV+N+D+PN+ + Y+HRIGR GR G
Sbjct: 297 QKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFG 356
Query: 504 KMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLT 539
+ G+A F ++ K + +E+PA L
Sbjct: 357 REGVAINFVKSSDMKDLKDIERHYGTKIREMPADLV 392
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 201/362 (55%), Gaps = 18/362 (4%)
Query: 151 FAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISG 210
F ++LG + I++ Y PTP+QR +P+ L+G D++A A+TGSGKTAAF P++
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 211 IMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQ 270
+ +Q++ + V ALILSPTR+L+ Q K+ T ++V + GG + Q
Sbjct: 90 L--KQHVPQGGVR------ALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQ 141
Query: 271 LRELERGVDILVATPGRLVDLL-ERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQM 329
EL +G D+++ATPGRL+ LL E ++L+ + Y+ DEAD + MGF Q+ +I+ Q+
Sbjct: 142 FEELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQL 201
Query: 330 DMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDLIAQRVEYVLDSDKR 389
RQT+LFSAT P + A L + + + + V +K
Sbjct: 202 SEN----RQTLLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSFLTVRPEEKY 257
Query: 390 SHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREM 449
S L+ L+ RE+ + +Q TL+FV TK + + + + +GD Q R++
Sbjct: 258 SALLYLV---REHISSDQQ--TLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKI 312
Query: 450 ALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLAT 509
+ F++ T +L+ TD+AARG+DIP + +V+N+D P +VHR+GR RAG+ G A
Sbjct: 313 HVSRFRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAY 372
Query: 510 AF 511
+F
Sbjct: 373 SF 374
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 201/394 (51%), Gaps = 20/394 (5%)
Query: 143 NVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAA 202
N ++F ++L L + I + KP+ +Q+ I G D++ AQ+G+GKTA
Sbjct: 35 NYDEVCDSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTAT 94
Query: 203 FCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAY 262
FC SG++++ I + AL+L+PTREL+ QI + GVK
Sbjct: 95 FC----SGVLQQLDISLVQCQ------ALVLAPTRELAQQIEKVMRALGDYLGVKAQACV 144
Query: 263 GGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQI 322
GG + + R L+ GV ++V TPGR+ DLL R + I+ LDEAD ML GF+ QI
Sbjct: 145 GGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQI 204
Query: 323 RKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDLIAQRVEY 382
I + + P Q +FSAT P E + F+ V + V R + + I Q +
Sbjct: 205 YDIFQLL----PSKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ---F 257
Query: 383 VLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDR 442
++ DK ++ L E + +++FV T++ D L + + HGD
Sbjct: 258 YVNVDKEEWKLETLCDLYETLAITQ---SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDM 314
Query: 443 TQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRA 502
Q R++ +R F+SG + +L+ TD+ ARG+D+ +VS V+NFDLP ++Y+HRIGR+GR
Sbjct: 315 DQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRF 374
Query: 503 GKMGLATAFFNEGNLSMAKPLADLMQEANQEVPA 536
G+ G+A F + M + +E+P+
Sbjct: 375 GRKGVAINFMTSEDERMMADIQRFYNVVVEELPS 408
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 209/408 (51%), Gaps = 32/408 (7%)
Query: 129 FEAYDDIPVDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRD 188
F +YDD+ +F + L + L + I + KP+ +Q+ I G D
Sbjct: 31 FTSYDDVH------------ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 78
Query: 189 LMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAK 248
++ AQ+G+GKTA FC SG++++ + AL+L+PTREL+ QI +
Sbjct: 79 VIQQAQSGTGKTATFC----SGVLQQLDFSLIQCQ------ALVLAPTRELAQQIEKVMR 128
Query: 249 KFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALD 308
GVKV GG + + R L+ GV ++V TPGR+ D+L+R + I+ LD
Sbjct: 129 ALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLD 188
Query: 309 EADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGR 368
EAD ML GF+ QI I + + PP + Q +FSAT P E + F++ V + V R
Sbjct: 189 EADEMLSRGFKDQIYDIFQ---LLPPKI-QVGVFSATMPPEALEITRKFMSKPVRILVKR 244
Query: 369 VGSSTDLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCL 428
+ + I Q + ++ +K ++ L E + +++FV T++ D L +
Sbjct: 245 DELTLEGIKQ---FYVNVEKEEWKLETLCDLYETLAITQ---SVIFVNTRRKVDWLTDKM 298
Query: 429 CVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPND 488
+ HGD Q R++ +R F+SG + +L+ TD+ ARG+D+ +VS V+NFDLP
Sbjct: 299 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 358
Query: 489 IDDYVHRIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPA 536
++Y+HRIGR+GR G+ G+A F + M + +E+P+
Sbjct: 359 PENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPS 406
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 209/408 (51%), Gaps = 32/408 (7%)
Query: 129 FEAYDDIPVDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRD 188
F +YDD+ +F + L + L + I + KP+ +Q+ I G D
Sbjct: 21 FTSYDDVH------------ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD 68
Query: 189 LMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAK 248
++ AQ+G+GKTA FC SG++++ + AL+L+PTREL+ QI +
Sbjct: 69 VIQQAQSGTGKTATFC----SGVLQQLDFSLIQCQ------ALVLAPTRELAQQIEKVMR 118
Query: 249 KFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALD 308
GVKV GG + + R L+ GV ++V TPGR+ D+L+R + I+ LD
Sbjct: 119 ALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLD 178
Query: 309 EADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGR 368
EAD ML GF+ QI I + + PP + Q +FSAT P E + F++ V + V R
Sbjct: 179 EADEMLSRGFKDQIYDIFQ---LLPPKI-QVGVFSATMPPEALEITRKFMSKPVRILVKR 234
Query: 369 VGSSTDLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCL 428
+ + I Q + ++ +K ++ L E + +++FV T++ D L +
Sbjct: 235 DELTLEGIKQ---FYVNVEKEEWKLETLCDLYETLAITQ---SVIFVNTRRKVDWLTDKM 288
Query: 429 CVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPND 488
+ HGD Q R++ +R F+SG + +L+ TD+ ARG+D+ +VS V+NFDLP
Sbjct: 289 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 348
Query: 489 IDDYVHRIGRTGRAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPA 536
++Y+HRIGR+GR G+ G+A F + M + +E+P+
Sbjct: 349 PENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVVEELPS 396
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 200/378 (52%), Gaps = 21/378 (5%)
Query: 159 ALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQ 218
L +N+ R + KP+ +Q+ I G D++ AQ+G+GKTA FC SG++++
Sbjct: 45 GLQENLLR-GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC----SGVLQQLDFS 99
Query: 219 RPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGV 278
+ AL+L+PTREL+ QI + GVKV GG + + R L+ GV
Sbjct: 100 LIQCQ------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGV 153
Query: 279 DILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQ 338
++V TPGR+ D+L+R + I+ LDEAD ML GF+ QI I + + PP + Q
Sbjct: 154 HVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQ---LLPPKI-Q 209
Query: 339 TMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDLIAQRVEYVLDSDKRSHLMDLLHA 398
+FSAT P E + F++ V + V R + + I Q + ++ +K ++ L
Sbjct: 210 VGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQ---FYVNVEKEEWKLETLCD 266
Query: 399 QRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGH 458
E + +++FV T++ D L + + HGD Q R++ +R F+SG
Sbjct: 267 LYETLAITQ---SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 323
Query: 459 TPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNLS 518
+ +L+ TD+ ARG+D+ +VS V+NFDLP ++Y+HRIGR+GR G+ G+A F +
Sbjct: 324 SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 383
Query: 519 MAKPLADLMQEANQEVPA 536
M + +E+P+
Sbjct: 384 MLFDIQKFYNVVVEELPS 401
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 209/410 (50%), Gaps = 33/410 (8%)
Query: 111 DDNDVDQSVGE-QENTGINFEAYDDIPVDTSGENVPPPVNTFAEIDLGDALNQNIQRCKY 169
D DQ + E E F +YDD+ +F + L + L + I +
Sbjct: 12 DARQFDQKLNEVLEGQDEFFTSYDDVH------------ESFDAMGLQENLLRGIYAYGF 59
Query: 170 VKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPM 229
KP+ +Q+ I G D++ AQ+G+GKTA FC SG++++ +
Sbjct: 60 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC----SGVLQQLDFSLIQC------Q 109
Query: 230 ALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLV 289
AL+L+PTREL+ QI + GVKV GG + + R L+ GV ++V TPGR+
Sbjct: 110 ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVF 169
Query: 290 DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKE 349
D+L+R + I+ LDEAD ML GF+ QI I + + PP + Q +FSAT P E
Sbjct: 170 DMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQ---LLPPKI-QVGVFSATMPPE 225
Query: 350 IQRLASDFLANYVFLAVGRVGSSTDLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQG 409
+ F++ V + V R + + I Q + ++ +K ++ L E +
Sbjct: 226 ALEITRKFMSKPVRILVKRDELTLEGIKQ---FYVNVEKEEWKLETLCDLYETLAITQ-- 280
Query: 410 LTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAA 469
+++FV T++ D L + + HGD Q R++ +R F+SG + +L+ TD+ A
Sbjct: 281 -SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
Query: 470 RGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNLSM 519
RG+D+ +VS V+NFDLP ++Y+HRIGR+GR G+ G+A F + M
Sbjct: 340 RGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERM 389
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 202/388 (52%), Gaps = 20/388 (5%)
Query: 149 NTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPII 208
+F + L + L + I + KP+ +Q+ I G D++ AQ+G+GKTA FC
Sbjct: 39 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC---- 94
Query: 209 SGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPIT 268
SG++++ + AL+L+PTREL+ QI + GVKV GG +
Sbjct: 95 SGVLQQLDYALLQCQ------ALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVR 148
Query: 269 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQ 328
+ R L+ GV ++V TPGR+ D+L R + I+ LDEAD ML GF+ QI I +
Sbjct: 149 EDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQ- 207
Query: 329 MDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDLIAQRVEYVLDSDK 388
+ PP + Q +FSAT P E + F++ V + V R + + I Q + ++ +K
Sbjct: 208 --LLPPKI-QVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQ---FYVNVEK 261
Query: 389 RSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQERE 448
++ L E + +++FV T++ D L + + HGD Q R+
Sbjct: 262 EDWKLETLCDLYETLAITQ---SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRD 318
Query: 449 MALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLA 508
+ +R F+SG + +L+ TD+ ARG+D+ +VS V+NFDLP ++Y+HRIGR+GR G+ G+A
Sbjct: 319 IIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVA 378
Query: 509 TAFFNEGNLSMAKPLADLMQEANQEVPA 536
F + M + +E+P+
Sbjct: 379 INFVTLDDQRMLFDIQKFYNVVVEELPS 406
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 199/378 (52%), Gaps = 21/378 (5%)
Query: 159 ALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQ 218
L +N+ R + KP+ +Q+ I G D++ AQ+G+GKTA FC SG++++
Sbjct: 45 GLQENLLR-GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC----SGVLQQLDYA 99
Query: 219 RPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGV 278
+ AL+L+PTREL+ QI + GVKV GG + + R L+ GV
Sbjct: 100 LLQCQ------ALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGV 153
Query: 279 DILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQ 338
++V TPGR+ D+L R + I+ LDEAD ML GF+ QI I + + PP + Q
Sbjct: 154 HVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQ---LLPPKI-Q 209
Query: 339 TMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDLIAQRVEYVLDSDKRSHLMDLLHA 398
+FSAT P E + F++ V + V R + + I Q + ++ +K ++ L
Sbjct: 210 VGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQ---FYVNVEKEDWKLETLCD 266
Query: 399 QRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGH 458
E + +++FV T++ D L + + HGD Q R++ +R F+SG
Sbjct: 267 LYETLAITQ---SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 323
Query: 459 TPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNLS 518
+ +L+ TD+ ARG+D+ +VS V+NFDLP ++Y+HRIGR+GR G+ G+A F +
Sbjct: 324 SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQR 383
Query: 519 MAKPLADLMQEANQEVPA 536
M + +E+P+
Sbjct: 384 MLFDIQKFYNVVVEELPS 401
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 194/389 (49%), Gaps = 25/389 (6%)
Query: 149 NTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPII 208
N F + L L I + +P+P+Q +IPI+L GRD++A A+ G+GKTAAFC P++
Sbjct: 131 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVL 190
Query: 209 SGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPIT 268
I ++ + + A+I+ PTREL+ Q K+ ++V+V GG +
Sbjct: 191 EKIDQDNNVIQ----------AVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 240
Query: 269 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQ 328
+ L + V +LV TPGR++DL ++ L+ L +DEAD++L F+P + ++
Sbjct: 241 DDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISF 300
Query: 329 MDMPPPGMRQTMLFSATFPKEIQRLASDFLAN-YVFLAVGRVGSSTDLIAQRVEYVLDSD 387
+ P RQ ++FSATFP ++ FL N YV + + + I Q +V +
Sbjct: 301 L----PESRQILMFSATFPVTVKDFKDRFLTNPYVINLMDEL--TLKGITQFYAFVEERQ 354
Query: 388 KRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQER 447
K L L + N++ ++F + + L + G+ IH Q R
Sbjct: 355 KIHCLNTLFSKLQINQS-------IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHR 407
Query: 448 EMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGL 507
F++G LV TD+ RG+DI V+ V+NFD P + + Y+HR+GR+GR G +GL
Sbjct: 408 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGL 467
Query: 508 ATAFFN-EGNLSMAKPLADLMQEANQEVP 535
A E ++ + +L E Q P
Sbjct: 468 AVNLITYEDRFNLYRIEQELGTEIKQIPP 496
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 194/389 (49%), Gaps = 25/389 (6%)
Query: 149 NTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPII 208
N F + L L I + +P+P+Q +IPI+L GRD++A A+ G+GKTAAFC P++
Sbjct: 131 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVL 190
Query: 209 SGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPIT 268
I ++ + + A+I+ PTREL+ Q K+ ++V+V GG +
Sbjct: 191 EKIDQDNNVIQ----------AVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 240
Query: 269 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQ 328
+ L + V +LV TPGR++DL ++ L+ L +DEAD++L F+P + ++
Sbjct: 241 DDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISF 300
Query: 329 MDMPPPGMRQTMLFSATFPKEIQRLASDFLAN-YVFLAVGRVGSSTDLIAQRVEYVLDSD 387
+ P RQ ++FSATFP ++ FL N YV + + + I Q +V +
Sbjct: 301 L----PESRQILMFSATFPVTVKDFKDRFLTNPYVINLMDEL--TLKGITQFYAFVEERQ 354
Query: 388 KRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQER 447
K L L + N++ ++F + + L + G+ IH Q R
Sbjct: 355 KIHCLNTLFSKLQINQS-------IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHR 407
Query: 448 EMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGL 507
F++G LV TD+ RG+DI V+ V+NFD P + + Y+HR+GR+GR G +GL
Sbjct: 408 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGL 467
Query: 508 ATAFFN-EGNLSMAKPLADLMQEANQEVP 535
A E ++ + +L E Q P
Sbjct: 468 AVNLITYEDRFNLYRIEQELGTEIKQIPP 496
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/400 (35%), Positives = 208/400 (52%), Gaps = 55/400 (13%)
Query: 138 DTSGENVPPPVNTFAEIDLGDALNQ-NIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTG 196
+T ++ PP++ D+ +ALNQ + + C TPVQ IP+ + +D+ A TG
Sbjct: 13 ETRFSDLEPPLSG----DIIEALNQSDFEFC-----TPVQAATIPLLCSYKDVAVDAATG 63
Query: 197 SGKTAAFCFPIISGIMREQYIQRPRVARTAFP------MALILSPTRELSCQIHDEAKKF 250
SGKT AF P++ + R T+FP M +I+SPTRELS QI++ A+ F
Sbjct: 64 SGKTLAFVVPLVEILRRS----------TSFPPKPHQVMGVIISPTRELSTQIYNVAQPF 113
Query: 251 -SYQTGVKVVVAYGGAPITQQLRELER-GVDILVATPGRLVDLLERARV-SLQMIRYLAL 307
S V V+ GG + ++ +E G ++L+ TPGRL D++ER + + + L L
Sbjct: 114 VSTLANVNSVLLVGGREVKADMKIIEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILIL 173
Query: 308 DEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAV- 366
DEADR+L+MGF+ Q+ I+ ++ P R+T LFSAT + ++ LA L N V + V
Sbjct: 174 DEADRLLEMGFQRQVNYIISRL----PKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVR 229
Query: 367 --GRVGSSTDLIAQR------VEYV-LDSDKRS-HLMDLLHAQRENETFGKQGLTLVFVE 416
+ SS L + +EY+ ++DK+S L+DLL + + +VF
Sbjct: 230 AKSKSESSQQLTNSKTPSGLHLEYMECEADKKSSQLVDLLIKNSDKKL-------IVFFM 282
Query: 417 TKKGAD----ALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGL 472
T D L + IHGD Q R+ AL SF + L+ TDVAARGL
Sbjct: 283 TCASVDYWGLVLSKIPALKSISLIPIHGDMKQNARDKALASFTKASSGALLCTDVAARGL 342
Query: 473 DIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFF 512
DIP + +VV +D P D + + HR GRT R G+ G A F
Sbjct: 343 DIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAIVFL 382
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 184/362 (50%), Gaps = 24/362 (6%)
Query: 149 NTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPII 208
N F + L L + I + KP+P+Q +IPI+L G D++A A+ G+GKT AFC P +
Sbjct: 154 NEFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTL 213
Query: 209 SGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPIT 268
I E + + A+IL PTREL+ Q K+ S ++V+V GG +
Sbjct: 214 EKIDPENNVIQ----------AVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLR 263
Query: 269 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQ 328
+ L + V +LV TPGR++DL ++ L+ L +DEAD++L + F+P I ++++
Sbjct: 264 DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQF 323
Query: 329 MDMPPPGMRQTMLFSATFPKEIQRLASDFLAN-YVFLAVGRVGSSTDLIAQRVEYVLDSD 387
+ P RQ ++FSATFP ++ +L Y+ + ++ + Q +V +
Sbjct: 324 L----PESRQILMFSATFPVTVKSFKDRYLKKPYIINLMDQLTLMG--VTQYYAFVEERQ 377
Query: 388 KRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQER 447
K L L + N+ +++F + + L + G+ IH Q R
Sbjct: 378 KVHCLNTLFSKLQINQ-------SIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHR 430
Query: 448 EMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGL 507
F++G LV TD+ RG+DI V+ V+NFD P + Y+HR+GR+GR G +GL
Sbjct: 431 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGL 490
Query: 508 AT 509
A
Sbjct: 491 AV 492
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 182/343 (53%), Gaps = 23/343 (6%)
Query: 172 PTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMAL 231
P+ VQ IP ++ G D++ A++G GKTA F + I P + + AL
Sbjct: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI-------EPSPGQVS---AL 118
Query: 232 ILSPTRELSCQIHDEAKKFS-YQTGVKVVVAYGGAPITQQLRELERGV-DILVATPGRLV 289
+L TREL+ QI +E +FS Y KV V YGG I L+ I+V TPGR++
Sbjct: 119 VLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVL 178
Query: 290 DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKE 349
L +SL+ +R+ LDE D+ML+ +R+ V+++ P +Q M+FSAT KE
Sbjct: 179 ALAREKDLSLKNVRHFILDECDKMLE---SLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
Query: 350 IQRLASDFLANYVFLAVGRVGSST-DLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQ 408
I+ + F+ + + + V T + Q + + +K L DLL A N+
Sbjct: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQV---- 291
Query: 409 GLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVA 468
++FV++ A L L FP+ CIH +Q+ER +SFK GH ILVATD+
Sbjct: 292 ---VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLV 348
Query: 469 ARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAF 511
RG+DI RV+ V+N+D+P+ D Y+HR+GR GR G GLA F
Sbjct: 349 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 391
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 182/343 (53%), Gaps = 23/343 (6%)
Query: 172 PTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMAL 231
P+ VQ IP ++ G D++ A++G GKTA F + I P + + AL
Sbjct: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI-------EPSPGQVS---AL 118
Query: 232 ILSPTRELSCQIHDEAKKFS-YQTGVKVVVAYGGAPITQQLRELERGV-DILVATPGRLV 289
+L TREL+ QI +E +FS Y KV V YGG I L+ I+V TPGR++
Sbjct: 119 VLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVL 178
Query: 290 DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKE 349
L +SL+ +R+ LDE D+ML+ +R+ V+++ P +Q M+FSAT KE
Sbjct: 179 ALAREKDLSLKNVRHFILDECDKMLE---SLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
Query: 350 IQRLASDFLANYVFLAVGRVGSST-DLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQ 408
I+ + F+ + + + V T + Q + + +K L DLL A N+
Sbjct: 236 IRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQV---- 291
Query: 409 GLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVA 468
++FV++ A L L FP+ CIH +Q+ER +SFK GH ILVATD+
Sbjct: 292 ---VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLV 348
Query: 469 ARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAF 511
RG+DI RV+ V+N+D+P+ D Y+HR+GR GR G GLA F
Sbjct: 349 GRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 391
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 191/373 (51%), Gaps = 26/373 (6%)
Query: 151 FAEID--LGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPII 208
F+E+ L + + + + R + TPVQ IP + +D++ A TGSGKT AF P I
Sbjct: 16 FSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFI 75
Query: 209 SGIMREQ-YIQRPRVARTAFPMALILSPTRELSCQIHDEAKKF-SYQTGVKVVVAYGGAP 266
I R Y +P M +I+SPTRELS QIH A+ F S V V+ GG
Sbjct: 76 EIIRRSNSYPPKPHQV-----MGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGRE 130
Query: 267 ITQQLRELER-GVDILVATPGRLVDLLERAR-VSLQMIRYLALDEADRMLDMGFEPQIRK 324
+ + LE G ++L+ TPGRL D+++R + + + L LDEADR+LDMGF+ Q+
Sbjct: 131 VEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNY 190
Query: 325 IVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDLIAQRVEYV- 383
I+ ++ P R+T LFSAT + + LA L N + + G S EY+
Sbjct: 191 IISRL----PKQRRTGLFSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSGLYCEYLK 246
Query: 384 LDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGAD----ALEHCLCVNGFPATCIH 439
++D++S L+H EN K +VF T D L + H
Sbjct: 247 CEADQKSS--QLVHLLIEN----KNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTH 300
Query: 440 GDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRT 499
G Q+ R+ AL SF + +L+ TDVAARGLDIP + +VV +D P D D ++HR+GRT
Sbjct: 301 GKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRT 360
Query: 500 GRAGKMGLATAFF 512
R + G A F
Sbjct: 361 ARMERQGRAIVFL 373
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 193/399 (48%), Gaps = 16/399 (4%)
Query: 148 VNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPI 207
V F E+ L + + +Q PT +Q IP + + ++ + TGSGKT A+ PI
Sbjct: 111 VENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPI 170
Query: 208 ISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPI 267
+ +MRE + + P ++L PTRELS Q++ AK S+ + ++ GG+ I
Sbjct: 171 VQ-LMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSILVSGGSRI 229
Query: 268 TQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVE 327
Q L +D++V TPGR++ +E + I YL LDEAD M D GF P+IRK +
Sbjct: 230 RPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLA 289
Query: 328 QMDMPPPGMR----QTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDLIAQ-RVEY 382
++ QT+L +AT +Q+L + L R + IA R ++
Sbjct: 290 PLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHL---RTSTLHKKIANARHDF 346
Query: 383 VLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDR 442
+ S L LL Q + K +VF T + A++H L N HG+
Sbjct: 347 IKLSGGEDKLEALL--QVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEV 404
Query: 443 TQQEREMALRSFK--SGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTG 500
++R L+ FK G P LV TD+AARGLD+ V HVV FD P + DY+HR GRT
Sbjct: 405 PAEQRVENLKKFKDEEGDCPTLVCTDLAARGLDLD-VDHVVMFDFPKNSIDYLHRTGRTA 463
Query: 501 RAGKMGLATAFFNEGNLSMAKPLADLMQEANQEVPAWLT 539
R G G T+ + + +A + + M+ N E LT
Sbjct: 464 RMGAKGKVTSLVSRKDQMLAARIEEAMR--NNESLESLT 500
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 183/362 (50%), Gaps = 24/362 (6%)
Query: 149 NTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPII 208
N F + L L + I + KP+P+Q +IPI+L G D++A A+ G+GKT AFC P++
Sbjct: 124 NEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVL 183
Query: 209 SGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPIT 268
I + + A+IL PTREL+ Q K+ S ++V+V GG +
Sbjct: 184 EKIDPNNNVIQ----------AMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLR 233
Query: 269 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQ 328
+ L + V +LV TPGR++DL ++ L+ L +DEAD++L F+P + ++++
Sbjct: 234 DDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQF 293
Query: 329 MDMPPPGMRQTMLFSATFPKEIQRLASDFLAN-YVFLAVGRVGSSTDLIAQRVEYVLDSD 387
+ P RQ ++FSATFP ++ L YV + ++ + + Q +V +
Sbjct: 294 L----PQNRQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQL--TLMGVTQYYAFVEERQ 347
Query: 388 KRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQER 447
K L L + N+ +++F + + L + G+ IH Q R
Sbjct: 348 KVHCLNTLFSKLQINQ-------SIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHR 400
Query: 448 EMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGL 507
F++G LV TD+ RG+DI V+ V+NFD P + Y+HR+GR+GR G +GL
Sbjct: 401 NRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGL 460
Query: 508 AT 509
A
Sbjct: 461 AV 462
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 183/362 (50%), Gaps = 24/362 (6%)
Query: 149 NTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPII 208
N F + L L + I + KP+P+Q +IPI+L G D++A A+ G+GKT AFC P++
Sbjct: 124 NEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVL 183
Query: 209 SGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPIT 268
I + + A+IL PTREL+ Q K+ S ++V+V GG +
Sbjct: 184 EKIDPNNNVIQ----------AMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLR 233
Query: 269 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQ 328
+ L + V +LV TPGR++DL ++ L+ L +DEAD++L F+P + ++++
Sbjct: 234 DDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQF 293
Query: 329 MDMPPPGMRQTMLFSATFPKEIQRLASDFLAN-YVFLAVGRVGSSTDLIAQRVEYVLDSD 387
+ P RQ ++FSATFP ++ L YV + ++ + + Q +V +
Sbjct: 294 L----PQNRQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQL--TLMGVTQYYAFVEERQ 347
Query: 388 KRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQER 447
K L L + N+ +++F + + L + G+ IH Q R
Sbjct: 348 KVHCLNTLFSKLQINQ-------SIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHR 400
Query: 448 EMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGL 507
F++G LV TD+ RG+DI V+ V+NFD P + Y+HR+GR+GR G +GL
Sbjct: 401 NRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGL 460
Query: 508 AT 509
A
Sbjct: 461 AV 462
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 184/348 (52%), Gaps = 9/348 (2%)
Query: 174 PVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALIL 233
P+Q + L G DL+ A+TG GKT AF PI+ ++ + ++ P L+L
Sbjct: 121 PIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSKRKMGYGRSPSVLVL 180
Query: 234 SPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLE 293
PTREL+ Q+ + + G+ YGG Q +L+RGVDI+V TPGR+ D +E
Sbjct: 181 LPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGVDIVVGTPGRIKDHIE 240
Query: 294 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRL 353
R + +++ LDEAD ML MGF + I+ +++ QT+LFSAT P ++ +
Sbjct: 241 RQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKVE--DSTKVQTLLFSATLPSWVKNI 298
Query: 354 ASDFLANYVFLAVGRVGSSTDLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLV 413
++ FL + VG+ + V ++ ++ + L+ + G Q T++
Sbjct: 299 SNRFLKRDQ-KTIDLVGNDKMKASNSVRHIAIPCNKAAMARLIPDIISCYSSGGQ--TII 355
Query: 414 FVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLD 473
F ETK L L +G + +HG+ Q +RE+ L F++G LVAT+VAARGLD
Sbjct: 356 FAETKVQVSELSGLL--DG--SRALHGEIPQSQREVTLAGFRNGKFATLVATNVAARGLD 411
Query: 474 IPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNLSMAK 521
I V ++ + P +++ Y+HR GRTGRAG G+A ++ S+++
Sbjct: 412 INDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTLYDSRKSSVSR 459
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 190/395 (48%), Gaps = 68/395 (17%)
Query: 172 PTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMAL 231
P+ VQ IP ++ G D++ A++G GKTA F + I P + + AL
Sbjct: 69 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI-------EPSPGQVS---AL 118
Query: 232 ILSPTRELSCQIHDEAKKFS-YQTGVKVVVAYGGAPITQQLRELERGV-DILVATPGRLV 289
+L TREL+ QI +E +FS Y KV V YGG I L+ I+V TPGR++
Sbjct: 119 VLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVL 178
Query: 290 DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKE 349
L +SL+ +R+ LDE D+ML+ +R+ V+++ P +Q M+FSAT KE
Sbjct: 179 ALAREKDLSLKNVRHFILDECDKMLE---SLDMRRDVQEIFKMTPHDKQVMMFSATLSKE 235
Query: 350 I----QRLASDFLAN------------------------------YVFLAVGRVGSSTDL 375
I ++ DFL N +F A+ S T +
Sbjct: 236 IRPVCKKFMQDFLENETVSVRLFSFGVENSEWRLCSFGFIVLVWVSMFRAILMFHSKTHI 295
Query: 376 IAQR-------VEYVLDSDKRSHLMDLL-HAQRENETFGKQGL-----------TLVFVE 416
++ +E +D + + L L+ H + +E + L ++FV+
Sbjct: 296 FEEKRWTRISPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVK 355
Query: 417 TKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPR 476
+ A L L FP+ CIH +Q+ER +SFK GH ILVATD+ RG+DI R
Sbjct: 356 SVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIER 415
Query: 477 VSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAF 511
V+ V+N+D+P+ D Y+HR+GR GR G GLA F
Sbjct: 416 VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 450
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 188/380 (49%), Gaps = 50/380 (13%)
Query: 169 YVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFP 228
+ P+ VQ IP ++ G D++ A++G GKTA F + I P + +
Sbjct: 66 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI-------EPSPGQVS-- 116
Query: 229 MALILSPTRELSCQIHDEAKKFS-YQTGVKVVVAYGGAPITQQLRELERGV-DILVATPG 286
AL+L TREL+ QI +E +FS Y KV V YGG I L+ I+V TPG
Sbjct: 117 -ALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPG 175
Query: 287 RLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATF 346
R++ L +SL+ +R+ LDE D+ML+ +R+ V+++ P +Q M+FSAT
Sbjct: 176 RVLALAREKDLSLKNVRHFILDECDKMLE---SLDMRRDVQEIFKMTPHDKQVMMFSATL 232
Query: 347 PKEIQRLASDFLAN-------------YVFLAVG----------RVGSSTDLIAQRVEYV 383
KEI+ + F+ + +V G R+G + +E
Sbjct: 233 SKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSGYCVFPRFHRARMGLNVPSNIDPMEIY 292
Query: 384 LDSDKRSHLMDLL-HAQRENETFGKQGL-----------TLVFVETKKGADALEHCLCVN 431
+D + + L L+ H + +E + L ++FV++ A L L
Sbjct: 293 VDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVEC 352
Query: 432 GFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDD 491
FP+ CIH +Q+ER +SFK GH ILVATD+ RG+DI RV+ V+N+D+P+ D
Sbjct: 353 NFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADT 412
Query: 492 YVHRIGRTGRAGKMGLATAF 511
Y+HR+GR GR G GLA F
Sbjct: 413 YLHRVGRAGRFGTKGLAITF 432
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/327 (35%), Positives = 173/327 (52%), Gaps = 23/327 (7%)
Query: 188 DLMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEA 247
D++ A++G GKTA F + I P + + AL+L TREL+ QI +E
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQI-------EPSPGQVS---ALVLCHTRELAYQICNEF 51
Query: 248 KKFS-YQTGVKVVVAYGGAPITQQLRELERGV-DILVATPGRLVDLLERARVSLQMIRYL 305
+FS Y KV V YGG I L+ I+V TPGR++ L +SL+ +R+
Sbjct: 52 VRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHF 111
Query: 306 ALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLA 365
LDE D+ML+ +R+ V+++ P +Q M+FSAT KEI+ + F+ + + +
Sbjct: 112 ILDECDKMLE---SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIY 168
Query: 366 VGRVGSST-DLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADAL 424
V T + Q + + +K L DLL A N+ ++FV++ A L
Sbjct: 169 VDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQV-------VIFVKSVSRAAEL 221
Query: 425 EHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFD 484
L FP+ CIH +Q+ER +SFK GH ILVATD+ RG+DI RV+ V+N+D
Sbjct: 222 NKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYD 281
Query: 485 LPNDIDDYVHRIGRTGRAGKMGLATAF 511
+P+ D Y+HR+GR GR G GLA F
Sbjct: 282 MPDSADTYLHRVGRAGRFGTKGLAITF 308
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 181/358 (50%), Gaps = 25/358 (6%)
Query: 150 TFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIIS 209
TF + L D ++I+ + + T +Q AIP + G D++ A+TGSGKT AF P +
Sbjct: 155 TFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVE 214
Query: 210 GIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAK---KFSYQTGVKVVVAYGGAP 266
+ R ++ R L++ PTREL+ Q + AK K+ QT KV+ GG
Sbjct: 215 LLYRVKFTPRNGTG------VLVICPTRELAIQSYGVAKELLKYHSQTVGKVI---GGEK 265
Query: 267 ITQQLRELERGVDILVATPGRLVDLLERAR-VSLQMIRYLALDEADRMLDMGFEPQIRKI 325
+ L +GV++LVATPGRL+D LE + +++L +DEADR+L+ FE ++KI
Sbjct: 266 RKTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKI 325
Query: 326 VEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAV--GRVGSSTDLIAQRVEYV 383
+ + P RQT LFSAT +++ LA L + V++ V GR + + + Q V
Sbjct: 326 LNLL----PKTRQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVV 381
Query: 384 LDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRT 443
+ + L+ L + F + +VF T K F I G
Sbjct: 382 PSAMRLLFLLTFL------KRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGID 435
Query: 444 QQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGR 501
Q +R F T IL+ T+VAARGLD P V +V +D P++ DY+HR+GRT R
Sbjct: 436 QNKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTAR 493
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 190/389 (48%), Gaps = 25/389 (6%)
Query: 173 TPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPMALI 232
T VQ +PI L G+D++A A+TG+GKT AF P I +++ R +R + L+
Sbjct: 406 TVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRD--SRQPPIIVLV 463
Query: 233 LSPTRELSCQIHDEAKKF-SYQTGVKVVVAYGGAPI-TQQLRELERGVDILVATPGRLVD 290
+ PTREL+ Q EA Y + V V GG + T+Q R ILVATPGRL D
Sbjct: 464 VCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKD 523
Query: 291 LLERAR---VSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFP 347
+E L ++ L LDEAD +LDMGF I +I+ + P RQT LFSAT P
Sbjct: 524 HIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAV----PKQRQTFLFSATVP 579
Query: 348 KEIQRLASDFLA-NYVFLAVGRVGSSTDLIAQRVEYVLDS-DKRSHLMDLLHAQRENETF 405
+E++++ L ++ F+ + GS Y++ S D+ L+ +L + +
Sbjct: 580 EEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMYMIASLDRHFSLLHVLLKEHIADNV 639
Query: 406 GKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVAT 465
+ ++F T + L IH + Q R F+ ILV +
Sbjct: 640 DYK--VIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQSYRTRVSDEFRKSKAIILVTS 697
Query: 466 DVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMG---LATAFFNEGNLSMAK- 521
DV+ARG+D P VS VV LP+D + Y+HR+GRTGR GK G L A + E +S K
Sbjct: 698 DVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEYFMSSVKD 757
Query: 522 ------PLADLMQEANQEVPAWLTRYAAK 544
PL + EA + V L++ K
Sbjct: 758 LPITKSPLPPIDPEAVKRVQKGLSQVEMK 786
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 192/385 (49%), Gaps = 22/385 (5%)
Query: 151 FAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISG 210
F + L + I+ + T VQ +P+ L G+D++A A+TG+GKT AF P I
Sbjct: 82 FDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEA 141
Query: 211 IMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAK---KFSYQTGVKVVVAYGGAPI 267
+++ R R + L++ PTREL+CQ EA K+ GV+VV+ GG +
Sbjct: 142 VIKAPPASRDN--RHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVI--GGTKL 197
Query: 268 TQQLRELERG-VDILVATPGRLVDLLERAR---VSLQMIRYLALDEADRMLDMGFEPQIR 323
+ R L++ ILVATPGRL D ++ L ++ L LDEAD +LDMGF +I
Sbjct: 198 PTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREIE 257
Query: 324 KIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLA-NYVFLAVGRVGS-STDLIAQRVE 381
+I+ + P RQT LFSAT E++++ L ++ F+ + G+ T ++
Sbjct: 258 RIIAAV----PKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVSQMY 313
Query: 382 YVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGD 441
+ D+ L+ L + + G + ++F T + L IH
Sbjct: 314 MIASLDRHFSLLYGLLKKHITDNVGYK--VIIFCTTAMVTRLVADLLGKLSLNVREIHSR 371
Query: 442 RTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGR 501
+ Q R F+ + ILV +DV+ARG+D P VS VV LP+D + Y+HR+GRTGR
Sbjct: 372 KPQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGR 431
Query: 502 AGKMG---LATAFFNEGNLSMAKPL 523
GK G L A + E LS K L
Sbjct: 432 KGKEGEGVLLLAPWEEYFLSSVKDL 456
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 197/417 (47%), Gaps = 45/417 (10%)
Query: 148 VNTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPI 207
V FA++ + D + ++ KYV T VQ AIP +L GRD++ A+TGSGKT AF PI
Sbjct: 70 VRKFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPI 129
Query: 208 ISGIMREQYIQRPRVARTAFPMALILSPTRELSCQ---IHDEAKKF-SYQTGVKVVVAYG 263
+ + RE++ V +I+SPTREL+ Q + ++ KF + G+ + G
Sbjct: 130 LEKLHRERWSPEDGVG------CIIISPTRELAAQTFGVLNKVGKFHKFSAGLLI----G 179
Query: 264 GAPITQQLRELERGVDILVATPGRLVDLL-ERARVSLQMIRYLALDEADRMLDMGFEPQI 322
G +E ++ILV PGRL+ + E ++ L LDEADR+LD F+ Q+
Sbjct: 180 GREGVDVEKERVHEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQL 239
Query: 323 RKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLAN--YVFLAVGRVGSSTDLIAQRV 380
I+ Q+ P RQT+LFSAT K+++ LA L + Y+ + V ++ + Q V
Sbjct: 240 DPIISQL----PKHRQTLLFSATQTKKVKDLARLSLRDPEYISVHAEAVTATPTSLMQTV 295
Query: 381 EYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCL--CVNGFPATCI 438
V K L + + LVF+ TKK + G P +
Sbjct: 296 MIVPVEKKLDMLWSFIKTHLNSR-------ILVFLSTKKQVKFVHEAFNKLRPGIPLKSL 348
Query: 439 HGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPR-VSHVVNFDLPNDIDDYVHRIG 497
HG + QE+ M + S +L TDV ARGLD + V VV D P D+ Y+HR+G
Sbjct: 349 HG-KMSQEKRMGVYSQFIERQSVLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVG 407
Query: 498 RTGRAGKMGLATAFFNEGNLSMAKPLADL-------------MQEANQEVPAWLTRY 541
RT R G + F M + L + +QE ++ + A L +Y
Sbjct: 408 RTARFYTQGKSLLFLTPSEEKMIEKLQEAKVPIKLIKANNQKLQEVSRLLAALLVKY 464
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/373 (34%), Positives = 181/373 (48%), Gaps = 24/373 (6%)
Query: 164 IQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYI----QR 219
I+ Y T VQ +PI L G+D++A A+TG+GKT AF P I +++ +R
Sbjct: 335 IKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPTSPDNKR 394
Query: 220 PRVARTAFPMALILSPTRELSCQIHDEAKKF-SYQTGVKVVVAYGGAPI-TQQLRELERG 277
P + +AL++ PTREL+ Q EA Y + V V GG + +Q R
Sbjct: 395 PPI------LALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQKRMQTNP 448
Query: 278 VDILVATPGRLVDLLERA---RVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPP 334
ILVATPGRL D +E L+ ++ L LDEAD +LDMGF I +I+ + P
Sbjct: 449 CQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAV----P 504
Query: 335 GMRQTMLFSATFPKEIQRLASDFLA-NYVFLAVGRVGSSTDLIAQRVEYVLDSDKRSHLM 393
RQT LFSAT P+E++++ L ++ F+ G+ R +++ S R H
Sbjct: 505 KERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIASLDR-HFS 563
Query: 394 DLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRS 453
L RE+ +VF T + L IH + Q R
Sbjct: 564 LLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSYRTRVSNE 623
Query: 454 FKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMG---LATA 510
F+ ILV +DV+ARG+D P V+ V+ LP D + Y+HR+GRTGR GK G L A
Sbjct: 624 FRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEGEGILLLA 683
Query: 511 FFNEGNLSMAKPL 523
+ E LS K L
Sbjct: 684 PWEEYFLSSLKDL 696
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 204/443 (46%), Gaps = 77/443 (17%)
Query: 150 TFAEIDLGDALNQNI-QRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPII 208
+F+ + L L+ + +R + PT VQ AIP+ L+GRD++ A TG+GKT A+ P+I
Sbjct: 30 SFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLI 89
Query: 209 SGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAY--GGAP 266
+ P+V R+ AL++ PTREL Q+++ +K ++ +V Y GG
Sbjct: 90 HHLQG----HSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHW-IVPGYVMGGEK 144
Query: 267 ITQQLRELERGVDILVATPGRLVDLLER-ARVSLQMIRYLALDEADRMLDMGFEPQIRKI 325
++ L +G+ IL+ATPGRL+D L+ A + +R++ DEAD +L++G+ +I +I
Sbjct: 145 KAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQI 204
Query: 326 V-----------EQMDMPPPGM-RQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSST 373
+ E+ D+ P G+ +Q +L SAT ++ LA L + V + +
Sbjct: 205 IKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLDNTKLQQ 264
Query: 374 DL-----------------------------------IAQRVEYVLDSDKRSHLMDLLHA 398
+L + QR V + L+ +L
Sbjct: 265 NLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVLKN 324
Query: 399 QRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATC------------------IHG 440
E E K +VF T+ D L +P +HG
Sbjct: 325 LFEREASQK---VVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHG 381
Query: 441 DRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTG 500
Q++R A +FK+ +L++TDVAARGLD P+V ++ +D P + +YVHR+GRT
Sbjct: 382 SMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTA 441
Query: 501 RAGKMGLATAFFNEGNLSMAKPL 523
R G+ G A F + K L
Sbjct: 442 RIGEKGEALLFLQPIEIDYLKEL 464
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 178/347 (51%), Gaps = 20/347 (5%)
Query: 170 VKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPM 229
+K T VQ + L G+D + A+TG+GK+ AF P I +++ + V + A
Sbjct: 349 LKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGKG-VNKVAPIF 407
Query: 230 ALILSPTRELSCQIHDEAK---KFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPG 286
ALIL PTREL+ QI E K KF GV+ ++ + QQ E E IL+ATPG
Sbjct: 408 ALILCPTRELASQIAAEGKALLKFHDGIGVQTLIGGTRFKLDQQRLESE-PCQILIATPG 466
Query: 287 RLVDLLERAR---VSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFS 343
RL+D +E L ++ +DEAD +LD+GF + KI++ + P RQ++LFS
Sbjct: 467 RLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEKIIDCL----PRQRQSLLFS 522
Query: 344 ATFPKEIQRLASDFLA---NYV-FLAVGRVGSSTDLIAQRVEYVLDSDKRSHLMDLLHAQ 399
AT PKE++R++ L +Y+ + +G V + D + Q V + HL+ L +
Sbjct: 523 ATIPKEVRRVSQLVLKRDHSYIDTIGLGCV-ETHDKVRQSC-IVAPHESHFHLVPHLLKE 580
Query: 400 RENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHT 459
N T + +VF T + L IH + Q R FK +
Sbjct: 581 HINNTPDYK--IIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTRVSDEFKESNR 638
Query: 460 PILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMG 506
ILV +DV+ARG++ P V+ V+ +P+D + Y+HR+GRTGR GK G
Sbjct: 639 LILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGG 685
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 203/420 (48%), Gaps = 52/420 (12%)
Query: 118 SVGEQENTGINFEAYDD--IPVDTSGENVPPPVNTFAEIDLGDALNQNIQ-RCKYVKPTP 174
S+ E+E E +D I TSG+ + F +++L L + + K+ KP+
Sbjct: 58 SIKEEEKPDSILEEPEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSK 117
Query: 175 VQRYAIPISLA--GRDLMACAQTGSGKTAAFCFPIISGI---MREQYIQRPRVARTAFPM 229
+Q ++P+ + + L+A A GSGKT F ++S + +RE P
Sbjct: 118 IQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPTLRE-------------PQ 164
Query: 230 ALILSPTRELSCQIHDEAKKFSYQTGVKVVVAY----GGAPITQQLRELERGVDILVATP 285
AL + PTREL+ Q + +K TG+ +A GAP R +++ TP
Sbjct: 165 ALCICPTRELANQNMEVLQKMGKFTGITAELAVPDSTRGAPAAT--RGAPVSAHVVIGTP 222
Query: 286 GRLVDLLERARVSLQMIRYLALDEADRMLDM-GFEPQIRKIVEQMDMPPPGMRQTMLFSA 344
G L + R+ L ++ L DEAD ML GF KI++ + P Q +LFSA
Sbjct: 223 GTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKIMKDIGRVNPNF-QVLLFSA 281
Query: 345 TFPKEIQRLASDFLANYVF----LAVGRVGSSTDLIAQRVEYVLDSDKRSHLMDLLHAQR 400
TF + ++ DF+A V L V R + D + Q Y + K + ++++ Q
Sbjct: 282 TFNETVK----DFVARTVKDPNQLFVKREDLALDSVKQ---YKVVCPKEQNKIEVIKDQI 334
Query: 401 ENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTP 460
G G T++FV+TK A + L G+ T +HG+ T+ +R+ ++ FK T
Sbjct: 335 ME--LGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTESDRDKIVKEFKECLTQ 392
Query: 461 ILVATDVAARGLDIPRVSHVVNFDLPN-------DIDDYVHRIGRTGRAGKMGLATAFFN 513
+L+ATDV ARG D RV+ VVN++LP D + Y+HR+GR GR G+ G A FN
Sbjct: 393 VLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGRAGRFGRKG---AVFN 449
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 179/355 (50%), Gaps = 20/355 (5%)
Query: 150 TFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIIS 209
TF +DL + + I+ + T +Q +I L G+D++ A+TGSGKT AF P +
Sbjct: 90 TFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVE 149
Query: 210 GIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQ 269
+ +E++ R +++ PTREL+ Q + A++ V + GG
Sbjct: 150 LLFKERFSPRNGTG------VIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRS 203
Query: 270 QLRELERGVDILVATPGRLVDLLERARVSL-QMIRYLALDEADRMLDMGFEPQIRKIVEQ 328
+ + + G ++++ATPGRL+D L+ + + + ++ L +DEADR+L+ FE + KI++
Sbjct: 204 EAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKI 263
Query: 329 MDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAV--GRVGSSTDLIAQRVEYVLDS 386
+ P RQT LFSAT +++ LA L + V + V GR + + + Q V+ S
Sbjct: 264 L----PKTRQTALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGY-CVVPS 318
Query: 387 DKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQE 446
+R L+ + N+ +VF T K + ++ + IHG Q
Sbjct: 319 KQRLILLISFLKKNLNKKI------MVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNR 372
Query: 447 REMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGR 501
R F IL+ TDVAARGLDIP V ++ +D P+ +Y+HR+GRT R
Sbjct: 373 RTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTAR 427
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 114/346 (32%), Positives = 173/346 (50%), Gaps = 18/346 (5%)
Query: 170 VKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFPM 229
VK T VQ + L G+D + A+TG+GK+ AF P I +++ + V + A
Sbjct: 396 VKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGKG-VHKVAPIF 454
Query: 230 ALILSPTRELSCQIHDEAKKF-SYQTGVKVVVAYGGAPITQQLRELERG-VDILVATPGR 287
LIL PTREL+ QI E K G+ V GG + LE IL+ATPGR
Sbjct: 455 VLILCPTRELASQIAAEGKALLKNHDGIGVQTLIGGTRFRLDQQRLESEPCQILIATPGR 514
Query: 288 LVDLLERAR---VSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSA 344
L+D +E L ++ +DEAD +LD+GF+ + KI++ + P RQ++LFSA
Sbjct: 515 LLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVEKIIDCL----PRQRQSLLFSA 570
Query: 345 TFPKEIQRLASDFLA---NYV-FLAVGRVGSSTDLIAQRVEYVLDSDKRSHLMDLLHAQR 400
T PKE++R++ L +Y+ + +G V + D + Q + + SH + H +
Sbjct: 571 TIPKEVRRVSQLVLKRDHSYIDTIGLGCV-ETHDKVKQ---SCIVAPHESHFHLVPHLLK 626
Query: 401 ENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTP 460
E+ +VF T + L IH + Q R FK +
Sbjct: 627 EHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTCVSDEFKESNRL 686
Query: 461 ILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMG 506
ILV +DV+ARG++ P V+ V+ +P+D + Y+HR+GRTGR GK G
Sbjct: 687 ILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKGG 732
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 218/463 (47%), Gaps = 77/463 (16%)
Query: 115 VDQSVGEQENTGINFEAYDDIPVDTSGENVPPPVNTFAEIDLGDALNQNIQRCKYVKPTP 174
++++ Q+ + ++ + D + E +PP + ++ + L L ++I R + +PT
Sbjct: 156 INEAAKNQDASAVSCDGDDTVEEQVEEEEIPPEFSAWSSMRLHPLLMKSIYRLDFKEPTK 215
Query: 175 VQRYAIPIS-LAGRDLMACAQTGSGKTAAFCFPIISGIMREQYI----------QRPRVA 223
+Q+ ++ G+D++ A+TGSGKT AF PI+ ++ E+ + + A
Sbjct: 216 IQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKVGKLYALKGEEAQKYA 275
Query: 224 RTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVA 283
+ ALI++PTREL+ Q+ + + + VKVV GG +Q R L+ +I+VA
Sbjct: 276 ADGYLRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVA 335
Query: 284 TPGRLVDLL---ERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQM---DMP----- 332
TPGRL +L+ E+ V L + + LDEADRM++ G +++ I++ + D P
Sbjct: 336 TPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKT 395
Query: 333 ------------PPGMRQTMLFSATFPKEIQRLASDFL-----------------ANYVF 363
P RQT +FSAT L+SDF N +
Sbjct: 396 QTVKSNDTVLNVPKKKRQTFVFSATIA-----LSSDFRKKLKRGSSKSKQSSSGEVNSIE 450
Query: 364 LAVGRVG----------SSTDLIAQRVEYVL----DSDKRSHLMDLLHAQRENETFGKQG 409
+ R G ++T ++A ++E + +K ++L +L + QG
Sbjct: 451 VLSERAGMRDNVAIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYIL-------SVHGQG 503
Query: 410 LTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAA 469
T+VF + + L + G + + Q+ R ++ F++ IL+ATD+ A
Sbjct: 504 RTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRASENGILIATDLVA 563
Query: 470 RGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFF 512
RG+DI V ++++ LP+ + YVHR GRT RA G + A
Sbjct: 564 RGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIALI 606
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 194/421 (46%), Gaps = 54/421 (12%)
Query: 149 NTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPII 208
+F E+ L D+L +++R + PT VQ A+P + G D + + TGSGKT A+ PI+
Sbjct: 110 KSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPIL 169
Query: 209 SGI------MREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKF---SYQTGVKVV 259
S I R + + + RT A+I++P+REL QI E +K ++ V+ +
Sbjct: 170 SEIGPLAEKSRSSHSENDK--RTEI-QAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQL 226
Query: 260 VAYGGAPITQQLRELERGV-DILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGF 318
V GGA +Q L++ I+V TPGR+ ++ + ++ R+L LDE D +L F
Sbjct: 227 V--GGANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNF 284
Query: 319 EPQIRKIVEQM----------DMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFL---- 364
I +I+E + ++ RQT+L SAT P + R A + V +
Sbjct: 285 REDIHRILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANK 344
Query: 365 ----------------------AVGRVGSSTDLIAQRVEYVLDSDKRSHLMDLLHAQREN 402
A G++ ++ + +++ K H +D L +R
Sbjct: 345 VTPLDTVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTL--RRCV 402
Query: 403 ETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPIL 462
Q + +++ D + + L G + +HGD + R L+ FK+G +L
Sbjct: 403 HALDAQSVIAFMNHSRQLKDVV-YKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVL 461
Query: 463 VATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNLSMAKP 522
V +++ARGLD+ VVN +LP D Y HR GRTGR G+ G E + + K
Sbjct: 462 VTNELSARGLDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKK 521
Query: 523 L 523
+
Sbjct: 522 M 522
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 169/359 (47%), Gaps = 57/359 (15%)
Query: 133 DDIPVDTSGENVPPPVNTFAEID--LGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLM 190
D P +T E PP F+E+ L + + + + R + TPVQ IP + +D++
Sbjct: 2 DSSPPNTIIEEAPP---RFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVV 58
Query: 191 ACAQTGSGKTAAFCFPIISGIMREQ-YIQRPRVARTAFPMALILSPTRELSCQIHDEAKK 249
A TGSGKT AF P I I R Y +P M +I+SPTRELS QIH A+
Sbjct: 59 VDAATGSGKTLAFLLPFIEIIRRSNSYPPKPHQV-----MGVIISPTRELSAQIHKVAR- 112
Query: 250 FSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERAR-VSLQMIRYLALD 308
V++ A E G ++L+ TPGRL D+++R + + + L LD
Sbjct: 113 -----AVRLDFAKCREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILD 167
Query: 309 EADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGR 368
EADR+LDMGF+ Q+ I+ ++ P R+T LFSAT + + LA L N
Sbjct: 168 EADRLLDMGFQKQVNYIISRL----PKQRRTGLFSATQTQAVADLAKAGLRNPYLKC--- 220
Query: 369 VGSSTDLIAQRVEYVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGAD------ 422
++D++S L+H EN K +VF T D
Sbjct: 221 ----------------EADQKSS--QLVHLLIEN----KNKKLVVFFMTCACVDYWGLVI 258
Query: 423 -ALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHV 480
+ ++ FP HG Q+ R+ AL SF + +L+ TDVAARGLDIP + ++
Sbjct: 259 SKIPSLKSISFFPT---HGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYI 314
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 182/385 (47%), Gaps = 34/385 (8%)
Query: 150 TFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIIS 209
TFAEI + + + ++ + +P +Q A + G+ + Q+GSGKT A+ P+I
Sbjct: 375 TFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQ 434
Query: 210 GIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGV--KVVVAYGGAPI 267
+RE+ +Q + P ++L PT EL+ Q+ + S ++GV + +V GG
Sbjct: 435 R-LREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSIS-KSGVPFRSMVVTGGFRQ 492
Query: 268 TQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML-DMGFEPQIRKIV 326
QL LE+GVD+L+ATPGR L+ + L +R LDE D + D FE ++ ++
Sbjct: 493 RTQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLI 552
Query: 327 EQMDMPPPGMRQTMLFSATFPKEI-QRLASDFLANYVFLA--VGRVGS---------STD 374
P Q + +AT P EI +L F V + V RV + S D
Sbjct: 553 NS----SPVTAQYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGD 608
Query: 375 LIAQRVEYVLDSDKRSHLMDLLHAQRENET--FGKQGLTLVFVETK-KGADALEHCLCVN 431
A++ +K++ L+ ++ ++T F + T VE K D E L V
Sbjct: 609 DNAEKTPETAFQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVL 668
Query: 432 GFPATCIHGDRTQQEREMALRSFKSG----HTPILVATDVAARGLDIPRVSHVVNFDLPN 487
F H +Q+ R ++ F S ++ LV TD A+RG+D V HVV FD P
Sbjct: 669 PF-----HAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPR 723
Query: 488 DIDDYVHRIGRTGRAGKMGLATAFF 512
D +YV R+GRT R G G AF
Sbjct: 724 DPSEYVRRVGRTAR-GARGKGKAFI 747
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 175/396 (44%), Gaps = 53/396 (13%)
Query: 149 NTFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPII 208
+F E+ L L + + + KPT +Q+ AIP L G+D++A A+TGSGKT A+ P++
Sbjct: 46 KSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLL 105
Query: 209 SGIMREQYIQRPRVARTAFPMALILSPTRELSCQIHDEAKKFSYQTGVKV-VVAYGGAPI 267
+ + + ++A P A IL P+REL Q++ E V++ V +
Sbjct: 106 QKLFSADSVSKKKLA----PSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMS 161
Query: 268 TQQLRELERGV-DILVATPGRL-----VDLLERARVSLQMIRYLALDEADRMLDMGFEPQ 321
+R G+ +ILV+TP + +LE VS + + L LDEAD +L G+E
Sbjct: 162 ASDMRNALAGLPEILVSTPACIPKCFAAGVLEPTAVS-ESLSILVLDEADLLLSYGYEDN 220
Query: 322 IRKIVEQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGSSTDLIAQRVE 381
+R + + P Q +L SAT ++++L L N + L + + + V+
Sbjct: 221 LRSVTSII----PRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQ 276
Query: 382 YVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGD 441
S + + A + E K+ L+F+ T L+ L G + ++G+
Sbjct: 277 QFWISCSAQDKLLHILALLKLEVVQKK--ILIFINTIDMGFRLKLFLEKFGIKSAILNGE 334
Query: 442 RTQQEREMALRSFKSGHTPILVATDV---------------------------------- 467
Q R L F +G L+ATD
Sbjct: 335 LPQNSRLHILEQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEF 394
Query: 468 -AARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRA 502
RG+D +V V+NFD+P + Y+HRIGRTGRA
Sbjct: 395 GVVRGIDFKKVHTVINFDMPQSVTGYIHRIGRTGRA 430
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 163/363 (44%), Gaps = 54/363 (14%)
Query: 169 YVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMREQYIQRPRVARTAFP 228
+V PT +QR A+P GRD + AQTGSGKT + I S I QR V
Sbjct: 96 FVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLINP----QRSSVQ----- 146
Query: 229 MALILSPTRELSCQIHDEAKKFSYQT-----GVKVVVAYGGAPITQQLRELE-RGVDILV 282
A+I+ PTREL Q+ A+ + ++ G V+ G + + L+ ILV
Sbjct: 147 -AVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILV 205
Query: 283 ATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP-QIRKIVEQMDMPPPGMRQTML 341
AT L +LE+ + +R L +DE D + + +RK++ RQT+
Sbjct: 206 ATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFS--SCDKRQTVF 263
Query: 342 FSATFPKEIQRLASDFLA------NYVFLAVGRVGSSTDLIAQRVEYVLDSDKRSHLMDL 395
SA+ P+ + D + + V + V + + R ++K L+ L
Sbjct: 264 ASASIPQH-KHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVLLAL 322
Query: 396 LHAQ----------RENETFGKQG------LTLVFVETK-KGADALEHCLCVNGFPATCI 438
L + ++E K G L + F++T KG+ LE L +
Sbjct: 323 LESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGS--LEILL---------L 371
Query: 439 HGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGR 498
GD R +L + G +LV+TD+AARG+D+P +H+ NFDLP + DY+HR GR
Sbjct: 372 EGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGR 431
Query: 499 TGR 501
GR
Sbjct: 432 AGR 434
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 170/383 (44%), Gaps = 82/383 (21%)
Query: 187 RDLMACAQTGSGKTAAFCFPIISGIMREQYIQRP-RVARTAFPMALILSPTRELSCQIHD 245
RD+ + TGSGKT ++ PI+ + RP R R AL++ PTR+L+ Q+ D
Sbjct: 73 RDICVNSPTGSGKTLSYALPIV-----QLLASRPVRCLR-----ALVVLPTRDLALQVKD 122
Query: 246 EAKKFSYQTGVKVVVAYGGAPITQQLREL---------------------ERGVDILVAT 284
+ G+ V A G + I ++ +L E VDILVAT
Sbjct: 123 VFDAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVAT 182
Query: 285 PGRLVDLLERAR-VSLQMIRYLALDEADRMLDMGFE---PQIRKIVEQMD---------- 330
PGRL+D + + +L+ +RYL +DE DR+L ++ P + ++ + D
Sbjct: 183 PGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPF 242
Query: 331 MPPP-GMRQT--------------------MLFSATFPKEIQRLASDFLANYVFLAVGRV 369
+P G QT M+ SAT ++ +L L + +F+ G
Sbjct: 243 VPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTG-- 300
Query: 370 GSSTDLIAQRVE---YVLDSDKRSHLMDLLHAQRENETFGKQGLTLVFVETKKGADALEH 426
GS L +++E + ++ + + L E E ++F + + L
Sbjct: 301 GSRYRL-PEKLECLRLICETGMKPVYLVALLKSWEGEK------CIIFTSSVETTRRLCK 353
Query: 427 CLCVNGFP---ATCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNF 483
L G P A G Q R L++F+ G +LVA+D RG+D+ V++V+N+
Sbjct: 354 LLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINY 413
Query: 484 DLPNDIDDYVHRIGRTGRAGKMG 506
D+P ++HR GRT RAG+ G
Sbjct: 414 DMPPFAKTFIHRAGRTARAGQAG 436
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 110/246 (44%), Gaps = 38/246 (15%)
Query: 280 ILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP-QIRKIVEQMDMPPPGMRQ 338
ILVAT L +LE+ + +R L +DE D + + +RK++ RQ
Sbjct: 46 ILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFS--SCDKRQ 103
Query: 339 TMLFSATFPKEIQRLASDFLA------NYVFLAVGRVGSSTDLIAQRVEYVLDSDKRSHL 392
T+ SA+ P+ + D + + V + V + + R ++K L
Sbjct: 104 TVFASASIPQH-KHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVL 162
Query: 393 MDLLHAQ----------RENETFGKQG------LTLVFVETK-KGADALEHCLCVNGFPA 435
+ LL + ++E K G L + F++T KG+ LE L
Sbjct: 163 LALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGS--LEILL------- 213
Query: 436 TCIHGDRTQQEREMALRSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHR 495
+ GD R +L + G +LV+TD+AARG+D+P +H+ NFDLP + DY+HR
Sbjct: 214 --LEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHR 271
Query: 496 IGRTGR 501
GR GR
Sbjct: 272 AGRAGR 277
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 337 RQTMLFSATFPKEIQRLASDFLANYVFLAVGRVGS-----STDLIAQRVEYVLDSDKRSH 391
+Q + +AT P ++ A L + AV G+ S L + VE +DS
Sbjct: 353 KQYIFIAATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSPRLKQKWVEVTVDSQ---- 408
Query: 392 LMDLLHAQRENETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMAL 451
+D L +N T+VF T + +A+ L H + ER L
Sbjct: 409 -VDALIEAVKNNNNTNTERTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANIL 467
Query: 452 RSFKSGHTPILVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAF 511
F+ + V TD AARG+D+P VSHV+ D + D++HRIGRT RAG+ G T+
Sbjct: 468 ADFRET-GGVFVCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSL 526
Query: 512 FNEGNLSMAKPLADLMQ 528
+ E N + + + + ++
Sbjct: 527 YTEANRDLVEAIREAVK 543
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 39/202 (19%)
Query: 150 TFAEIDLGDALNQNIQRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIIS 209
++ + L D ++ ++ + +P+ Q IP L+G+D++ A+TGSGKT + PII
Sbjct: 81 SWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPIID 140
Query: 210 GIM----------REQYIQRPRVARTAFPM---ALILSPTRELSCQIHDEAKKFSYQTG- 255
+ RE +RP FP+ +LIL P L Q+ + G
Sbjct: 141 QLTNTALDSEVTNRE---ERP------FPLKNISLILCPNVMLCEQVVRMVNGLVDEDGN 191
Query: 256 ----VKVVVAYGGAPITQQLRELERGVDILVATPGRLVDLLERARVS----LQMIRYLAL 307
V+ V G P +R DI+V+TP L++ +E R L+ ++Y+
Sbjct: 192 PLLRVEAVCGSQGWP--------DRLPDIIVSTPAALLNNIEPKRNRRLEFLRCVKYVVF 243
Query: 308 DEADRMLDMGFEPQIRKIVEQM 329
DEAD +L F+ QI +++ +
Sbjct: 244 DEADMLLCGSFQNQIIRLINML 265
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 148/363 (40%), Gaps = 48/363 (13%)
Query: 176 QRYAIPISLAGRDLMACAQTGSGKTAAFCFP--IISGIMREQYIQRPRVARTAFPMALIL 233
Q AI + L G M TG+GK+ + P I+ GI L++
Sbjct: 274 QLQAIKMILGGSSTMLVLPTGAGKSLCYQIPAMILPGI------------------TLVV 315
Query: 234 SPTRELSCQIHDEAKKF-SYQTGVKVVVAYGGAPITQQLRELERGV-DILVATPGRL--V 289
SP L + D+ K S G + + T+ LR+L+ G+ +L +P RL V
Sbjct: 316 SPLVSL---MIDQLKHLPSIIKGGLLSSSQRPEEATETLRKLKEGIIKVLFVSPERLLNV 372
Query: 290 DLLERARVSLQMIRYLALDEADRMLDMG--FEPQIRKIVEQMDMPPPGMRQTMLFSATFP 347
+ L R+SL + + +DEA + + F P + ++ +MLFS
Sbjct: 373 EFLSMFRMSLS-VSLVVVDEAHCVSEWSHNFRPSYMR-----------LKASMLFSELKA 420
Query: 348 KEIQRLASDFLANYVFLAVGRVG-SSTDLIAQ-----RVEYVLDSDKRSHLMDLLHAQRE 401
+ I + + + + + ST+LI + E + + + DLL E
Sbjct: 421 ECILAMTATATTMTLQAVMSSLEIPSTNLIQKSQLRDNFELSVSLSGANRMKDLL-ILME 479
Query: 402 NETFGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPI 461
+ + + +V+ + + D + L N A H ++R SF S +
Sbjct: 480 SPPYKEIRSIIVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNKIRV 539
Query: 462 LVATDVAARGLDIPRVSHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNLSMAK 521
+VAT GLD V V++F +P +++YV IGR GR G++ F++ +
Sbjct: 540 VVATVAFGMGLDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDGRLSYCHLFYDNDTYLKLR 599
Query: 522 PLA 524
LA
Sbjct: 600 SLA 602
>AT2G28600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:12251845-12254672
FORWARD LENGTH=502
Length = 502
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 119/314 (37%), Gaps = 26/314 (8%)
Query: 228 PMALILSPTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERGV-DILVATPG 286
P L L P++ + Q+ K G+ V + GAP+ Q+ L+ + +VATP
Sbjct: 197 PFLLYLVPSQSKASQVRSVCKALK-GIGIHTVSLHQGAPLDHQISGLKSVEPEFIVATPE 255
Query: 287 RLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTMLFSATF 346
RL++++ V + + L +DE + G+ ++ I + + QT++F+ +F
Sbjct: 256 RLLEIVTLKGVDISNVSLLVIDELGSLCSGGYLNAVKSIKQAIS----SKHQTIVFNNSF 311
Query: 347 PKEIQRLASDFLANYV--FLAVGRVGSSTDLIAQRVEYVLDSDKRSHLMDLLHAQRENET 404
I FL V V S I Q V +K+ Q+ +
Sbjct: 312 SASIIPAVQSFLGGSVNRVTVNESVASQGSCITQTVSVCASEEKK--------LQKFAKH 363
Query: 405 FGKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREMALRSFKSGHTPILVA 464
L+++ TK+ ++ + + + + G + L K P+
Sbjct: 364 LDSSSSKLIYIVTKE--ESFKKIMAI-----LKLKGISVSTSSDSKLSEVKKSRKPVAHL 416
Query: 465 TDVAARGLDIPRVSHVVNF-DLPNDIDDYVHRIGRTGRAGKMGLATAFFNEGNLS--MAK 521
D + R S V D I+ Y + R G+ ++ E + + A
Sbjct: 417 IDFEQLDTTVMRDSETVLLPDFFPSIEIYTQILTSMARESAHGVLHSYITEKDAASYQAG 476
Query: 522 PLADLMQEANQEVP 535
PL ++++ Q VP
Sbjct: 477 PLVNVLENCGQNVP 490