Miyakogusa Predicted Gene
- Lj5g3v0747050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0747050.1 Non Chatacterized Hit- tr|J9P457|J9P457_CANFA
Uncharacterized protein OS=Canis familiaris GN=FBXL20
,28.23,1e-18,LRR_6,NULL; seg,NULL; no description,NULL; RNI-like,NULL;
Leucine-rich repeat - CC (cysteine-contain,CUFF.53904.1
(357 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G58530.1 | Symbols: | RNI-like superfamily protein | chr3:21... 447 e-126
AT5G23340.1 | Symbols: | RNI-like superfamily protein | chr5:78... 101 1e-21
AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protei... 94 2e-19
AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein | c... 91 9e-19
AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein | ch... 88 7e-18
AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily pr... 88 7e-18
AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 | chr... 84 2e-16
AT5G27920.1 | Symbols: | F-box family protein | chr5:9942063-99... 80 3e-15
AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1... 79 7e-15
AT5G01720.1 | Symbols: | RNI-like superfamily protein | chr5:26... 78 7e-15
AT1G55590.1 | Symbols: | RNI-like superfamily protein | chr1:20... 73 3e-13
AT5G21900.1 | Symbols: | RNI-like superfamily protein | chr5:72... 73 4e-13
AT2G17020.1 | Symbols: | F-box/RNI-like superfamily protein | c... 71 1e-12
AT5G51370.2 | Symbols: | RNI-like superfamily protein | chr5:20... 64 2e-10
AT5G51380.1 | Symbols: | RNI-like superfamily protein | chr5:20... 62 5e-10
AT3G07550.2 | Symbols: | RNI-like superfamily protein | chr3:24... 62 6e-10
AT3G07550.1 | Symbols: | RNI-like superfamily protein | chr3:24... 62 6e-10
AT4G33210.1 | Symbols: SLOMO | F-box family protein | chr4:16015... 61 1e-09
AT1G80630.1 | Symbols: | RNI-like superfamily protein | chr1:30... 60 2e-09
AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 | chr1:17276... 56 4e-08
AT1G80570.2 | Symbols: | RNI-like superfamily protein | chr1:30... 54 1e-07
AT1G80570.1 | Symbols: | RNI-like superfamily protein | chr1:30... 54 1e-07
AT1G80570.3 | Symbols: | RNI-like superfamily protein | chr1:30... 54 1e-07
AT2G06040.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Leucine-ri... 54 2e-07
AT5G67140.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 4e-07
AT3G50080.1 | Symbols: VFB2 | VIER F-box proteine 2 | chr3:18572... 52 6e-07
AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting prote... 52 7e-07
AT5G51370.1 | Symbols: | RNI-like superfamily protein | chr5:20... 51 1e-06
AT1G15740.1 | Symbols: | Leucine-rich repeat family protein | c... 50 2e-06
AT4G07400.1 | Symbols: VFB3 | VIER F-box proteine 3 | chr4:41978... 49 6e-06
AT5G07670.1 | Symbols: | RNI-like superfamily protein | chr5:24... 48 8e-06
>AT3G58530.1 | Symbols: | RNI-like superfamily protein |
chr3:21645759-21648219 FORWARD LENGTH=353
Length = 353
Score = 447 bits (1150), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/337 (64%), Positives = 265/337 (78%), Gaps = 2/337 (0%)
Query: 21 VPKVFKLVCSTLPLAHTDXXXXXXXXXXXHRTLVSCQPLWQSLIFREVNNAGNRLLAALS 80
V V +LV + LP TD +RTL+S +W ++ RE+ NAG+RLLAALS
Sbjct: 19 VTSVMRLVSTRLP--QTDLISLLLVSPWLYRTLISYPSIWLTINLREMTNAGDRLLAALS 76
Query: 81 LPRYRYVKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIEAITSCC 140
LPRYR VK I+LEFA+ V D+HL L+K +C D+L SLE LNLN CQKISD GIEAITS C
Sbjct: 77 LPRYRQVKHINLEFAQGVVDSHLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAITSIC 136
Query: 141 PQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNL 200
P+LK FSIYWNVRVTD + + V+NC+HI DLN+SGCK +TD+ +Q VAE+YP+LESLN+
Sbjct: 137 PKLKVFSIYWNVRVTDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQLVAESYPDLESLNI 196
Query: 201 TRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQ 260
TRC+K+TDDGL +L +C SLQ+LNLYALS FTD AY +ISLL L+FLD+CGAQN+SD+
Sbjct: 197 TRCVKITDDGLLQVLQKCFSLQTLNLYALSGFTDKAYMKISLLADLRFLDICGAQNISDE 256
Query: 261 GLHCISKCKDLVSLNLTWCVRVTDEGVIAVAQGCTSLEFLSLFGIVGVTDKCLEALSKSC 320
G+ I+KC L SLNLTWCVR+TD GV +A CTSLEFLSLFGIVGVTD+CLE LS++C
Sbjct: 257 GIGHIAKCNKLESLNLTWCVRITDAGVNTIANSCTSLEFLSLFGIVGVTDRCLETLSQTC 316
Query: 321 SDKITTLDVNGCIGIKKRSREELLQLFPYLKCFKVHS 357
S +TTLDVNGC GIK+RSREELLQ+FP L CFKVHS
Sbjct: 317 STTLTTLDVNGCTGIKRRSREELLQMFPRLTCFKVHS 353
>AT5G23340.1 | Symbols: | RNI-like superfamily protein |
chr5:7856314-7857983 FORWARD LENGTH=405
Length = 405
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 133/275 (48%), Gaps = 34/275 (12%)
Query: 71 AGNRLLAALSLPRYRYVKQIDLE------FARHVEDTHLILIKDKCFDSLQSLESLNLNG 124
AG +L L+ R+ + ++DL F V D+ L +I + + L LNL+
Sbjct: 53 AGPHMLRRLA-SRFTQIVELDLSQSISRSFYPGVTDSDLAVISE----GFKFLRVLNLHN 107
Query: 125 CQKISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQG 184
C+ I+DTG+ +I C L+ + + +++D L C + L+++GC+ ITD+
Sbjct: 108 CKGITDTGLASIGRCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDES 167
Query: 185 IQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLT 244
++ ++E +LE+L L C +TD GL L+ C ++SL++ S+ DA ++
Sbjct: 168 LKSLSERCRDLEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVA--- 224
Query: 245 RLKFLDLCGAQNLSDQGLHCISKCKDLVSLNLTWCVRVTDEGVIAVAQGCTSLEFLSLFG 304
C S K +L L C +V +E + ++AQ C +LE L + G
Sbjct: 225 -----------------KACASSLK---TLKLLDCYKVGNESISSLAQFCKNLETLIIGG 264
Query: 305 IVGVTDKCLEALSKSCSDKITTLDVNGCIGIKKRS 339
++D+ + L+ SC D + L ++ C+ I S
Sbjct: 265 CRDISDESIMLLADSCKDSLKNLRMDWCLNISDSS 299
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 128/258 (49%), Gaps = 34/258 (13%)
Query: 65 FREVNNAGNRLLAALSLP----RYRYVKQIDLEFARHVEDTHLILIKDKCFDSLQSLESL 120
R ++ AG R + SL R R ++ + L+ ++ D+ L + C + ++SL
Sbjct: 152 LRALHLAGCRFITDESLKSLSERCRDLEALGLQGCTNITDSGLADLVKGC----RKIKSL 207
Query: 121 NLNGCQKISDTGIEAIT-SCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQ 179
++N C + D G+ ++ +C LKT + +V + S+ + CK++ L I GC+
Sbjct: 208 DINKCSNVGDAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQFCKNLETLIIGGCRD 267
Query: 180 ITDQGIQFVAENYPE-LESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYR 238
I+D+ I +A++ + L++L + C+ ++D L +L QC +L++L++ TD A+R
Sbjct: 268 ISDESIMLLADSCKDSLKNLRMDWCLNISDSSLSCILKQCKNLEALDIGCCEEVTDTAFR 327
Query: 239 EISLLTRLKFLDLCGAQNLSDQGLHCISKCKDLVSLNLTWCVRVTDEGVIAVAQGCTSLE 298
++ SD L L L ++ C ++T G+ + C+SLE
Sbjct: 328 DLG----------------SDDVLG-------LKVLKVSNCTKITVTGIGKLLDKCSSLE 364
Query: 299 FLSLFGIVGVTD-KCLEA 315
++ + + VT+ +C EA
Sbjct: 365 YIDVRSLPHVTEVRCSEA 382
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 24/198 (12%)
Query: 154 VTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKP 213
VTD+ L K + LN+ CK ITD G+ + L+ L+++ C K++D GL
Sbjct: 85 VTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIGRCLSLLQFLDVSYCRKLSDKGLSA 144
Query: 214 LLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLHCISKCKDLVS 273
+ C L++L+L TD + + +S +C+DL +
Sbjct: 145 VAEGCHDLRALHLAGCRFITDESLKSLS------------------------ERCRDLEA 180
Query: 274 LNLTWCVRVTDEGVIAVAQGCTSLEFLSLFGIVGVTDKCLEALSKSCSDKITTLDVNGCI 333
L L C +TD G+ + +GC ++ L + V D + +++K+C+ + TL + C
Sbjct: 181 LGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASSLKTLKLLDCY 240
Query: 334 GIKKRSREELLQLFPYLK 351
+ S L Q L+
Sbjct: 241 KVGNESISSLAQFCKNLE 258
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 25/183 (13%)
Query: 85 RYVKQIDLEFARHVEDTHLILIKDKCFDSLQSL-----------------------ESLN 121
R +K +D+ +V D + + C SL++L E+L
Sbjct: 202 RKIKSLDINKCSNVGDAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQFCKNLETLI 261
Query: 122 LNGCQKISDTGIEAIT-SCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQI 180
+ GC+ ISD I + SC LK + W + ++D+SL ++ CK++ L+I C+++
Sbjct: 262 IGGCRDISDESIMLLADSCKDSLKNLRMDWCLNISDSSLSCILKQCKNLEALDIGCCEEV 321
Query: 181 TDQGIQ-FVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYRE 239
TD + +++ L+ L ++ C K+T G+ LL +C SL+ +++ +L T+ E
Sbjct: 322 TDTAFRDLGSDDVLGLKVLKVSNCTKITVTGIGKLLDKCSSLEYIDVRSLPHVTEVRCSE 381
Query: 240 ISL 242
L
Sbjct: 382 AGL 384
>AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protein |
chr1:7497479-7499386 FORWARD LENGTH=360
Length = 360
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 125/262 (47%), Gaps = 46/262 (17%)
Query: 117 LESLNLNGCQ-KISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNIS 175
L++LNL + ++ D +EAI + C +L+ + ++++TD SL C + LN+S
Sbjct: 92 LQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSLKITDRSLYALAHGCPDLTKLNLS 151
Query: 176 GCKQITDQGIQFVAENYPELESLNLTRCIK-VTDDGLKPLLHQCLSLQSLNLYALSSFTD 234
GC +D I ++ +L+ LNL C+K VTD+ L+ + + C +QSLNL
Sbjct: 152 GCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNLG------- 204
Query: 235 AAYREISLLTRLKFLDLCGAQNLSDQGLHCIS-KCKDLVSLNLTWCVRVTDEGVIAVAQG 293
+N+SD G+ ++ C DL +L+L CV +TDE V+A+A
Sbjct: 205 ------------------WCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALADW 246
Query: 294 CTSLEFLSLFGIVGVTDKCLEALSKSC-----------------SDKITTLDVNGCIGIK 336
C L L L+ +TD+ + +L++S + + +L+++ C +
Sbjct: 247 CVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGSWKSVKKGKYDEEGLRSLNISQCTALT 306
Query: 337 KRSREELLQLFPYLK-CFKVHS 357
+ + + FP L C HS
Sbjct: 307 PSAVQAVCDSFPALHTCSGRHS 328
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 87 VKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIEAITSCCPQLKTF 146
++++DL + + D L + C D L LNL+GC SDT I +T C +LK
Sbjct: 119 LQELDLSKSLKITDRSLYALAHGCPD----LTKLNLSGCTSFSDTAIAYLTRFCRKLKVL 174
Query: 147 SIYWNVR-VTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIK 205
++ V+ VTD +L NC + LN+ C+ I+D G+ +A P+L +L+L C+
Sbjct: 175 NLCGCVKAVTDNALEAIGNNCNQMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVL 234
Query: 206 VTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLHCI 265
+TD+ + L C+ L+SL LY + TD R + L + + G+ +G +
Sbjct: 235 ITDESVVALADWCVHLRSLGLYYCRNITD---RAMYSLAQSGVKNKPGSWKSVKKGKY-- 289
Query: 266 SKCKDLVSLNLTWCVRVTDEGVIAV 290
+ L SLN++ C +T V AV
Sbjct: 290 -DEEGLRSLNISQCTALTPSAVQAV 313
>AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8845927-8848701 FORWARD LENGTH=610
Length = 610
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 121/238 (50%), Gaps = 4/238 (1%)
Query: 116 SLESLNLNGCQKISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNIS 175
SLE L L Q +D G+ AI +LK ++ V+ L CK + + I+
Sbjct: 295 SLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEIN 354
Query: 176 GCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTDA 235
GC I +GI+ + ++ P L+ L L C ++ + L+ + C SL+ L+L S D
Sbjct: 355 GCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDI 414
Query: 236 AYREISLLTR-LKFLDLCGAQNLSDQGLHCISK-CKDLVSLNLTWCVRVTDEGVIAVAQG 293
A I+ R LK L + + ++G+ I K CK L L+L +C +V ++ +IA+ +G
Sbjct: 415 AMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKG 474
Query: 294 CTSLEFLSLFGIVGVTDKCLEALSKSCSDKITTLDVNGCIGIKKRSREELLQLFPYLK 351
C SL+ L++ G ++D + A+++ C ++T LD++ I EL + P LK
Sbjct: 475 C-SLQQLNVSGCNQISDAGITAIARGCP-QLTHLDISVLQNIGDMPLAELGEGCPMLK 530
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 114/238 (47%), Gaps = 2/238 (0%)
Query: 115 QSLESLNLNGCQKISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNI 174
+ LE + +NGC I GIEAI CP+LK ++ + R+ +++L + CK + L++
Sbjct: 346 KELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHL 405
Query: 175 SGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTD 234
C I D + +A+ L+ L++ RC ++ + G+ + C SL L+L +
Sbjct: 406 VDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGN 465
Query: 235 AAYREISLLTRLKFLDLCGAQNLSDQGLHCISK-CKDLVSLNLTWCVRVTDEGVIAVAQG 293
A I L+ L++ G +SD G+ I++ C L L+++ + D + + +G
Sbjct: 466 KALIAIGKGCSLQQLNVSGCNQISDAGITAIARGCPQLTHLDISVLQNIGDMPLAELGEG 525
Query: 294 CTSLEFLSLFGIVGVTDKCLEALSKSCSDKITTLDVNGCIGIKKRSREELLQLFPYLK 351
C L+ L L +TD L L + C + T + C GI ++ P++K
Sbjct: 526 CPMLKDLVLSHCHHITDNGLNHLVQKCK-LLETCHMVYCPGITSAGVATVVSSCPHIK 582
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 130/273 (47%), Gaps = 35/273 (12%)
Query: 106 IKDKCFDSLQSLESLNLNGCQKISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRN 165
+ DK +++ES +L +DTG+ A+ + P+++ S+ W V+ L +
Sbjct: 111 LTDKTHSGAENVESSSL------TDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQK 164
Query: 166 CKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQC-LSLQSL 224
C + L++ GC + DQG+ V + +LE LNL C +TD G+ L+ C SL+S+
Sbjct: 165 CTSLKSLDLQGC-YVGDQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSI 223
Query: 225 NLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLHCISK-CKDLVSLNLTWCVRVT 283
+ A + TD + + +L + ++ + D+GL +++ C L +L L CV VT
Sbjct: 224 GVAASAKITDLSLEAVGSHCKLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKL-QCVSVT 282
Query: 284 DEGVIAVAQGCTSLEFLSLFGIVGVTDKCLEALSK----------------SCSD----- 322
D AV + CTSLE L+L+ TDK + A+ K SC
Sbjct: 283 DVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIA 342
Query: 323 ----KITTLDVNGCIGIKKRSREELLQLFPYLK 351
++ +++NGC I R E + + P LK
Sbjct: 343 HGCKELERVEINGCHNIGTRGIEAIGKSCPRLK 375
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 116/240 (48%), Gaps = 9/240 (3%)
Query: 95 ARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIEAITSCCPQLKTFSIYWNVRV 154
+ ++ D LI + C L++L L C ++D A+ C L+ ++Y
Sbjct: 253 SEYIHDKGLIAVAQGC----HRLKNLKLQ-CVSVTDVAFAAVGELCTSLERLALYSFQHF 307
Query: 155 TDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPL 214
TD + + K + DL +S C ++ +G++ +A ELE + + C + G++ +
Sbjct: 308 TDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAI 367
Query: 215 LHQCLSLQSLNLYALSSFTDAAYREISLLTR-LKFLDLCGAQNLSDQGLHCISK-CKDLV 272
C L+ L L ++A +EI + L+ L L + D + I+K C++L
Sbjct: 368 GKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLK 427
Query: 273 SLNLTWCVRVTDEGVIAVAQGCTSLEFLSLFGIVGVTDKCLEALSKSCSDKITTLDVNGC 332
L++ C + ++G+I++ + C SL LSL V +K L A+ K CS + L+V+GC
Sbjct: 428 KLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGCS--LQQLNVSGC 485
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 121/279 (43%), Gaps = 60/279 (21%)
Query: 72 GNRLLAALSLPRYRYVKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDT 131
G++ LAA+ + +++++L F + D +I + C +SL+S+ + KI+D
Sbjct: 179 GDQGLAAVG-KFCKQLEELNLRFCEGLTDVGVIDLVVGCS---KSLKSIGVAASAKITDL 234
Query: 132 GIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAEN 191
+EA+ S C L+ + D+ +H D+G+ VA+
Sbjct: 235 SLEAVGSHCKLLEVLYL-------DSEYIH--------------------DKGLIAVAQG 267
Query: 192 YPELESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTR------ 245
L++L L +C+ VTD + C SL+ L LY+ FTD R I ++
Sbjct: 268 CHRLKNLKL-QCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLT 326
Query: 246 ---------------------LKFLDLCGAQNLSDQGLHCISK-CKDLVSLNLTWCVRVT 283
L+ +++ G N+ +G+ I K C L L L +C R+
Sbjct: 327 LSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRIG 386
Query: 284 DEGVIAVAQGCTSLEFLSLFGIVGVTDKCLEALSKSCSD 322
+ + + +GC SLE L L G+ D + +++K C +
Sbjct: 387 NSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRN 425
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 33/161 (20%)
Query: 167 KHIVDLNISGCKQI-----TDQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSL 221
K + D SG + + TD G+ +A +P +E+L+L C V+ GL L +C SL
Sbjct: 109 KKLTDKTHSGAENVESSSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSL 168
Query: 222 QSLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLHCISK-CKDLVSLNLTWCV 280
+SL+L Y + DQGL + K CK L LNL +C
Sbjct: 169 KSLDL-------QGCY-------------------VGDQGLAAVGKFCKQLEELNLRFCE 202
Query: 281 RVTDEGVIAVAQGCT-SLEFLSLFGIVGVTDKCLEALSKSC 320
+TD GVI + GC+ SL+ + + +TD LEA+ C
Sbjct: 203 GLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHC 243
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 34/165 (20%)
Query: 61 QSLIFREVNNAGNRLLAALSLPRY-RYVKQIDLEFARHVEDTHLILIKDKCFDSLQSLES 119
+ L R GN+ +S+ ++ + + ++ L F V + LI I C SL+
Sbjct: 427 KKLHIRRCYEIGNK--GIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGC-----SLQQ 479
Query: 120 LNLNGCQKISDTGIEAITSCCPQLK--TFSIYWNV------------------------R 153
LN++GC +ISD GI AI CPQL S+ N+
Sbjct: 480 LNVSGCNQISDAGITAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHH 539
Query: 154 VTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESL 198
+TD L H V+ CK + ++ C IT G+ V + P ++ +
Sbjct: 540 ITDNGLNHLVQKCKLLETCHMVYCPGITSAGVATVVSSCPHIKKV 584
>AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein |
chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 27/195 (13%)
Query: 127 KISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQ 186
++ D +EAI + C +L+ + + ++TD SL R C ++ LN+SGC +D +
Sbjct: 103 QLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALA 162
Query: 187 FVAENYPELESLNLTRCIK-VTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTR 245
+ +L+ LNL C++ V+D+ L+ + C LQSLNL
Sbjct: 163 HLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLG------------------ 204
Query: 246 LKFLDLCGAQNLSDQGLHCIS-KCKDLVSLNLTWCVRVTDEGVIAVAQGCTSLEFLSLFG 304
+N+SD G+ ++ C DL +L+L CV +TDE V+A+A C L L L+
Sbjct: 205 -------WCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYY 257
Query: 305 IVGVTDKCLEALSKS 319
+TD+ + +L++S
Sbjct: 258 CRNITDRAMYSLAQS 272
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 87 VKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIEAITSCCPQLKTF 146
++ +DL + + D L + C + L LNL+GC SDT + +T C +LK
Sbjct: 119 LQDLDLSKSSKITDHSLYSLARGCTN----LTKLNLSGCTSFSDTALAHLTRFCRKLKIL 174
Query: 147 SIYWNVR-VTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIK 205
++ V V+D +L NC + LN+ C+ I+D G+ +A P+L +L+L C+
Sbjct: 175 NLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVL 234
Query: 206 VTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREIS---LLTRLKFLDLCGAQNLSDQGL 262
+TD+ + L ++C+ L+SL LY + TD A ++ + + + ++GL
Sbjct: 235 ITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQSGVKNKHEMWRAVKKGKFDEEGL 294
Query: 263 HCISKCKDLVSLNLTWCVRVTDEGVIAV 290
SLN++ C +T V AV
Sbjct: 295 R---------SLNISQCTYLTPSAVQAV 313
>AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily
protein | chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 27/195 (13%)
Query: 127 KISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQ 186
++ D +EAI + C +L+ + + ++TD SL R C ++ LN+SGC +D +
Sbjct: 103 QLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALA 162
Query: 187 FVAENYPELESLNLTRCIK-VTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTR 245
+ +L+ LNL C++ V+D+ L+ + C LQSLNL
Sbjct: 163 HLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLG------------------ 204
Query: 246 LKFLDLCGAQNLSDQGLHCIS-KCKDLVSLNLTWCVRVTDEGVIAVAQGCTSLEFLSLFG 304
+N+SD G+ ++ C DL +L+L CV +TDE V+A+A C L L L+
Sbjct: 205 -------WCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYY 257
Query: 305 IVGVTDKCLEALSKS 319
+TD+ + +L++S
Sbjct: 258 CRNITDRAMYSLAQS 272
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 87 VKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIEAITSCCPQLKTF 146
++ +DL + + D L + C + L LNL+GC SDT + +T C +LK
Sbjct: 119 LQDLDLSKSSKITDHSLYSLARGCTN----LTKLNLSGCTSFSDTALAHLTRFCRKLKIL 174
Query: 147 SIYWNVR-VTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIK 205
++ V V+D +L NC + LN+ C+ I+D G+ +A P+L +L+L C+
Sbjct: 175 NLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVL 234
Query: 206 VTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREIS---LLTRLKFLDLCGAQNLSDQGL 262
+TD+ + L ++C+ L+SL LY + TD A ++ + + + ++GL
Sbjct: 235 ITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQSGVKNKHEMWRAVKKGKFDEEGL 294
Query: 263 HCISKCKDLVSLNLTWCVRVTDEGVIAV 290
SLN++ C +T V AV
Sbjct: 295 R---------SLNISQCTYLTPSAVQAV 313
>AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 |
chr5:8794842-8796882 REVERSE LENGTH=623
Length = 623
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 18/235 (7%)
Query: 94 FARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIEAITSCCPQLKTFSIYWNVR 153
F V D L + C SL ++L +SD G+ I CP ++ +
Sbjct: 150 FESKVTDVGLGAVAHGC----PSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPG 205
Query: 154 VTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKP 213
+TD+ L+ NC ++ DL I C + ++G++ +A L S+++ C ++ D G+
Sbjct: 206 ITDSGLVAIAENCVNLSDLTIDSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAF 265
Query: 214 LLHQCLS------LQSLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLHCISK 267
LL Q S LQ LN+ LS Y + L L G Q ++++G +
Sbjct: 266 LLAQAGSYLTKVKLQMLNVSGLSLAVIGHYG-----AAVTDLVLHGLQGVNEKGFWVMGN 320
Query: 268 CKD---LVSLNLTWCVRVTDEGVIAVAQGCTSLEFLSLFGIVGVTDKCLEALSKS 319
K L SL++ C +TD G+ AV GC L+ +SL + V+ K L AL+KS
Sbjct: 321 AKGLKKLKSLSVMSCRGMTDVGLEAVGNGCPDLKHVSLNKCLLVSGKGLVALAKS 375
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 35/262 (13%)
Query: 113 SLQSLESLNLNGCQKISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDL 172
L+ L+SL++ C+ ++D G+EA+ + CP LK S+ + V+ L+ ++ + L
Sbjct: 323 GLKKLKSLSVMSCRGMTDVGLEAVGNGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESL 382
Query: 173 NISGCKQITDQGIQ-FVAENYPELESLNLTRCIKVTD----------------------- 208
+ C +I G+ F+ +L++ +L C+ ++D
Sbjct: 383 KLEECHRINQFGLMGFLMNCGSKLKAFSLANCLGISDFNSESSLPSPSCSSLRSLSIRCC 442
Query: 209 -----DGLKPLLHQCLSLQSLNLYALSSFTDAAYREI--SLLTRLKFLDLCGAQNLSDQG 261
L L C LQ + L L+ TDA RE+ S L ++L N+SD
Sbjct: 443 PGFGDASLAFLGKFCHQLQDVELCGLNGVTDAGVRELLQSNNVGLVKVNLSECINVSDNT 502
Query: 262 LHCISKC--KDLVSLNLTWCVRVTDEGVIAVAQGCTSLEFLSLFGIVGVTDKCLEALSKS 319
+ IS C + L SLNL C +T+ ++AVA+ C S+ L + + V+D ++AL+ S
Sbjct: 503 VSAISVCHGRTLESLNLDGCKNITNASLVAVAKNCYSVNDLDISNTL-VSDHGIKALASS 561
Query: 320 CSD-KITTLDVNGCIGIKKRSR 340
+ + L + GC I +S+
Sbjct: 562 PNHLNLQVLSIGGCSSITDKSK 583
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 124/309 (40%), Gaps = 65/309 (21%)
Query: 87 VKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIEAITSCCPQLKTF 146
++++DL + D+ L+ I + C + L L ++ C + + G+ AI C L++
Sbjct: 195 IEKLDLSRCPGITDSGLVAIAENCVN----LSDLTIDSCSGVGNEGLRAIARRCVNLRSI 250
Query: 147 SI-----------------------------------------YWNVRVTDTSL------ 159
SI ++ VTD L
Sbjct: 251 SIRSCPRIGDQGVAFLLAQAGSYLTKVKLQMLNVSGLSLAVIGHYGAAVTDLVLHGLQGV 310
Query: 160 -------LHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLK 212
+ + K + L++ C+ +TD G++ V P+L+ ++L +C+ V+ GL
Sbjct: 311 NEKGFWVMGNAKGLKKLKSLSVMSCRGMTDVGLEAVGNGCPDLKHVSLNKCLLVSGKGLV 370
Query: 213 PLLHQCLSLQSLNL---YALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLHCISKCK 269
L LSL+SL L + ++ F + ++ ++LK L +SD
Sbjct: 371 ALAKSALSLESLKLEECHRINQFGLMGFL-MNCGSKLKAFSLANCLGISDFNSESSLPSP 429
Query: 270 DLV---SLNLTWCVRVTDEGVIAVAQGCTSLEFLSLFGIVGVTDKCLEALSKSCSDKITT 326
SL++ C D + + + C L+ + L G+ GVTD + L +S + +
Sbjct: 430 SCSSLRSLSIRCCPGFGDASLAFLGKFCHQLQDVELCGLNGVTDAGVRELLQSNNVGLVK 489
Query: 327 LDVNGCIGI 335
++++ CI +
Sbjct: 490 VNLSECINV 498
>AT5G27920.1 | Symbols: | F-box family protein |
chr5:9942063-9944507 REVERSE LENGTH=642
Length = 642
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 88/168 (52%), Gaps = 1/168 (0%)
Query: 152 VRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGL 211
V VTD ++ RNC ++ LN++ C +TD I VA++ L +L L C +T+ GL
Sbjct: 336 VDVTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSCRNLGTLKLESCHLITEKGL 395
Query: 212 KPLLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGL-HCISKCKD 270
+ L + +Q L+L D IS + L+ L L N+SD+G+ H SKC
Sbjct: 396 QSLGCYSMLVQELDLTDCYGVNDRGLEYISKCSNLQRLKLGLCTNISDKGIFHIGSKCSK 455
Query: 271 LVSLNLTWCVRVTDEGVIAVAQGCTSLEFLSLFGIVGVTDKCLEALSK 318
L+ L+L C D+G+ A+++GC SL L L +TD +E + +
Sbjct: 456 LLELDLYRCAGFGDDGLAALSRGCKSLNRLILSYCCELTDTGVEQIRQ 503
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 140/273 (51%), Gaps = 10/273 (3%)
Query: 72 GNRLLAALSLPRYRYVKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDT 131
G+R AALS ++++ ++ + D L I C +L ++L C +ISD
Sbjct: 135 GDREAAALS--SATGLRELKMDKCLSLSDVGLARIVVGC----SNLNKISLKWCMEISDL 188
Query: 132 GIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAEN 191
GI+ + C LK+ + + +++T+ S+ K V L++ C I D G+QF+
Sbjct: 189 GIDLLCKICKGLKSLDVSY-LKITNDSIRSIALLVKLEV-LDMVSCPLIDDGGLQFLENG 246
Query: 192 YPELESLNLTRCIKVTDDGLKPLLHQCLSLQSLNL-YALSSFTDAAYREISLLTRLKFLD 250
P L+ +++TRC +V+ GL ++ +Q L + +S + + + I L LK +
Sbjct: 247 SPSLQEVDVTRCDRVSLSGLISIVRGHPDIQLLKASHCVSEVSGSFLKYIKGLKHLKTIW 306
Query: 251 LCGAQNLSDQGLHCISKCKDLVSLNLTWCVRVTDEGVIAVAQGCTSLEFLSLFGIVGVTD 310
+ GA + S C+ L+ + L+ CV VTD G+I++A+ C +L+ L+L VTD
Sbjct: 307 IDGAHVSDSSLVSLSSSCRSLMEIGLSRCVDVTDIGMISLARNCLNLKTLNLACCGFVTD 366
Query: 311 KCLEALSKSCSDKITTLDVNGCIGIKKRSREEL 343
+ A+++SC + + TL + C I ++ + L
Sbjct: 367 VAISAVAQSCRN-LGTLKLESCHLITEKGLQSL 398
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 94/229 (41%), Gaps = 30/229 (13%)
Query: 89 QIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIEAITSCCPQLKTFSI 148
+I L V D +I + C + L++LNL C ++D I A+ C L T +
Sbjct: 329 EIGLSRCVDVTDIGMISLARNCLN----LKTLNLACCGFVTDVAISAVAQSCRNLGTLKL 384
Query: 149 YWNVRVTDTSL-------------------------LHTVRNCKHIVDLNISGCKQITDQ 183
+T+ L L + C ++ L + C I+D+
Sbjct: 385 ESCHLITEKGLQSLGCYSMLVQELDLTDCYGVNDRGLEYISKCSNLQRLKLGLCTNISDK 444
Query: 184 GIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLL 243
GI + +L L+L RC DDGL L C SL L L TD +I L
Sbjct: 445 GIFHIGSKCSKLLELDLYRCAGFGDDGLAALSRGCKSLNRLILSYCCELTDTGVEQIRQL 504
Query: 244 TRLKFLDLCGAQNLSDQGLHCI-SKCKDLVSLNLTWCVRVTDEGVIAVA 291
L L+L G +N++ GL I S CK L L++ C + D G A+A
Sbjct: 505 ELLSHLELRGLKNITGVGLAAIASGCKKLGYLDVKLCENIDDSGFWALA 553
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 106/223 (47%), Gaps = 7/223 (3%)
Query: 81 LPRYRYVKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIEAITSCC 140
L +Y + +DL ++D ++ + S ++SLNL+ + G+E + C
Sbjct: 61 LFKYPNLSSLDLSVCPKLDDDVVLRLALDGAISTLGIKSLNLSRSTAVRARGLETLARMC 120
Query: 141 PQLKTFSIY--WNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESL 198
L+ + W + + L + + +L + C ++D G+ + L +
Sbjct: 121 HALERVDVSHCWGFGDREAAALSSATGLR---ELKMDKCLSLSDVGLARIVVGCSNLNKI 177
Query: 199 NLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLS 258
+L C++++D G+ L C L+SL++ L T+ + R I+LL +L+ LD+ +
Sbjct: 178 SLKWCMEISDLGIDLLCKICKGLKSLDVSYL-KITNDSIRSIALLVKLEVLDMVSCPLID 236
Query: 259 DQGLHCI-SKCKDLVSLNLTWCVRVTDEGVIAVAQGCTSLEFL 300
D GL + + L +++T C RV+ G+I++ +G ++ L
Sbjct: 237 DGGLQFLENGSPSLQEVDVTRCDRVSLSGLISIVRGHPDIQLL 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 5/177 (2%)
Query: 87 VKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIEAITSCCPQLKTF 146
++++ L ++ D + I KC L+ L+L C D G+ A++ C L
Sbjct: 430 LQRLKLGLCTNISDKGIFHIGSKCSKLLE----LDLYRCAGFGDDGLAALSRGCKSLNRL 485
Query: 147 SIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKV 206
+ + +TDT + +R + + L + G K IT G+ +A +L L++ C +
Sbjct: 486 ILSYCCELTDTGV-EQIRQLELLSHLELRGLKNITGVGLAAIASGCKKLGYLDVKLCENI 544
Query: 207 TDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLH 263
D G L + +L+ +NL S A +S L+R++ +DL ++ +G
Sbjct: 545 DDSGFWALAYFSKNLRQINLCNCSVSDTALCMLMSNLSRVQDVDLVHLSRVTVEGFE 601
>AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 |
chr2:10848018-10850275 REVERSE LENGTH=628
Length = 628
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 32/268 (11%)
Query: 113 SLQSLESLNLNGCQKISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDL 172
LQ L SL + CQ ++D G+E++ CP +K I + ++D L+ + + L
Sbjct: 333 GLQKLNSLTITACQGVTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESL 392
Query: 173 NISGCKQITDQGIQFVAENYPE-LESLNLTRCIKVTD--DGLKPLLHQCLSLQSLNLYAL 229
+ C ++T G N E L++ +L C+ + D GL P C +L+SL++
Sbjct: 393 QLEECHRVTQFGFFGSLLNCGEKLKAFSLVNCLSIRDLTTGL-PASSHCSALRSLSIRNC 451
Query: 230 SSFTDAAYREIS-LLTRLKFLDLCGAQNLSDQG-LHCI---------SKCKDLVS----- 273
F DA I L +L+ +DLCG + +++ G LH I S C +L
Sbjct: 452 PGFGDANLAAIGKLCPQLEDIDLCGLKGITESGFLHLIQSSLVKINFSGCSNLTDRVISA 511
Query: 274 -----------LNLTWCVRVTDEGVIAVAQGCTSLEFLSLFGIVGVTDKCLEALSKSCSD 322
LN+ C +TD ++++A C L L + ++D ++AL+ S
Sbjct: 512 ITARNGWTLEVLNIDGCSNITDASLVSIAANCQILSDLDI-SKCAISDSGIQALASSDKL 570
Query: 323 KITTLDVNGCIGIKKRSREELLQLFPYL 350
K+ L V GC + +S ++ L L
Sbjct: 571 KLQILSVAGCSMVTDKSLPAIVGLGSTL 598
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 22/237 (9%)
Query: 127 KISDTGIEAITSCCPQLKTFSIYWNVR-VTDTSLLHTVRNCKHIVDLNISGCKQITDQGI 185
K+SD G+ +I CP L + S+ WNV +TD LL C + L ++ C ITD+G+
Sbjct: 163 KVSDLGLRSIGRSCPSLGSLSL-WNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGL 221
Query: 186 QFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREI----- 240
+A++ P L L L C ++ D+GL + C L+S+++ D +
Sbjct: 222 VAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTT 281
Query: 241 SLLTRLKFLDLCGAQNLSDQGLHCISKCK-DLVSLNLTWCVRVTDEG--VIAVAQGCTSL 297
L +LK L N++D L + + L L V+++G V+ G L
Sbjct: 282 CSLAKLKLQML----NVTDVSLAVVGHYGLSITDLVLAGLSHVSEKGFWVMGNGVGLQKL 337
Query: 298 EFLSLFGIVGVTDKCLEALSKSCSD-------KITTLDVNGCIGIKKRSRE-ELLQL 346
L++ GVTD LE++ K C + K L NG + K S E LQL
Sbjct: 338 NSLTITACQGVTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQL 394
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 27/240 (11%)
Query: 68 VNNAGNRLLAALSLPRYRYVKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQK 127
V AG L LS+ K V D L I C SL SL+L
Sbjct: 143 VGTAGRGGLGKLSIRGSNSAK---------VSDLGLRSIGRSC----PSLGSLSLWNVST 189
Query: 128 ISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQF 187
I+D G+ I C QL+ + +TD L+ ++C ++ +L + C +I D+G+
Sbjct: 190 ITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEACSRIGDEGLLA 249
Query: 188 VAENYPELESLNLTRCIKVTDDGLKPLLHQC------LSLQSLNLYALSSFTDAAYREIS 241
+A + +L+S+++ C V D G+ LL L LQ LN+ +S Y
Sbjct: 250 IARSCSKLKSVSIKNCPLVRDQGIASLLSNTTCSLAKLKLQMLNVTDVSLAVVGHYG--- 306
Query: 242 LLTRLKFLDLCGAQNLSDQGLHCISKC---KDLVSLNLTWCVRVTDEGVIAVAQGCTSLE 298
+ L L G ++S++G + + L SL +T C VTD G+ +V +GC +++
Sbjct: 307 --LSITDLVLAGLSHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDMGLESVGKGCPNMK 364
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 7/177 (3%)
Query: 115 QSLESLNLNGCQKISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNI 174
+L SL++ C D + AI CPQL+ + +T++ LH +++ +V +N
Sbjct: 441 SALRSLSIRNCPGFGDANLAAIGKLCPQLEDIDLCGLKGITESGFLHLIQS--SLVKINF 498
Query: 175 SGCKQITDQGIQFV-AENYPELESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFT 233
SGC +TD+ I + A N LE LN+ C +TD L + C L L++ + +
Sbjct: 499 SGCSNLTDRVISAITARNGWTLEVLNIDGCSNITDASLVSIAANCQILSDLDISKC-AIS 557
Query: 234 DAAYREISLLTRLKF--LDLCGAQNLSDQGLHCISKCKD-LVSLNLTWCVRVTDEGV 287
D+ + ++ +LK L + G ++D+ L I L+ LNL C +++ V
Sbjct: 558 DSGIQALASSDKLKLQILSVAGCSMVTDKSLPAIVGLGSTLLGLNLQQCRSISNSTV 614
>AT5G01720.1 | Symbols: | RNI-like superfamily protein |
chr5:267118-270391 REVERSE LENGTH=665
Length = 665
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 115/223 (51%), Gaps = 5/223 (2%)
Query: 114 LQSLESLNLNGCQKISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLN 173
+ +L+S+ L+GC D G++AI + C LK S+ V VTD L V K + L+
Sbjct: 303 VSALQSIRLDGCSVTPD-GLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLVMKLKDLRKLD 361
Query: 174 ISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFT 233
I+ C++++ I +A + P L SL + C V+ + + +C L+ L+L +
Sbjct: 362 ITCCRKLSRVSITQIANSCPLLVSLKMESCSLVSREAFWLIGQKCRLLEELDLTD-NEID 420
Query: 234 DAAYREISLLTRLKFLDLCGAQNLSDQGLHCIS-KCKDLVSLNLTWCVRVTDEGVIAVAQ 292
D + IS L L L N++D+GL I C +L L+L V +TD G+ +AQ
Sbjct: 421 DEGLKSISSCLSLSSLKLGICLNITDKGLSYIGMGCSNLRELDLYRSVGITDVGISTIAQ 480
Query: 293 GCTSLEFLSLFGIVGVTDKCLEALSKSCSDKITTLDVNGCIGI 335
GC LE +++ +TDK L +LSK CS + T + GC I
Sbjct: 481 GCIHLETINISYCQDITDKSLVSLSK-CS-LLQTFESRGCPNI 521
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 114 LQSLESLNLNGCQKISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLN 173
L+ L L++ C+K+S I I + CP L + + V+ + + C+ + +L+
Sbjct: 354 LKDLRKLDITCCRKLSRVSITQIANSCPLLVSLKMESCSLVSREAFWLIGQKCRLLEELD 413
Query: 174 ISG------------------------CKQITDQGIQFVAENYPELESLNLTRCIKVTDD 209
++ C ITD+G+ ++ L L+L R + +TD
Sbjct: 414 LTDNEIDDEGLKSISSCLSLSSLKLGICLNITDKGLSYIGMGCSNLRELDLYRSVGITDV 473
Query: 210 GLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLHCIS-KC 268
G+ + C+ L+++N+ TD + +S + L+ + G N++ QGL I+ +C
Sbjct: 474 GISTIAQGCIHLETINISYCQDITDKSLVSLSKCSLLQTFESRGCPNITSQGLAAIAVRC 533
Query: 269 KDLVSLNLTWCVRVTDEGVIAVAQ 292
K L ++L C + D G++A+A
Sbjct: 534 KRLAKVDLKKCPSINDAGLLALAH 557
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 114/245 (46%), Gaps = 6/245 (2%)
Query: 115 QSLESLNLNGCQKISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNI 174
+SLE L L C+ ++D GI I C +L T S+ W V V D + CK I L++
Sbjct: 150 RSLERLKLGRCKMLTDMGIGCIAVGCKKLNTVSLKWCVGVGDLGVGLLAVKCKDIRTLDL 209
Query: 175 SGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTD 234
S IT + + + + LE L L C V DD LK L H C SL+ L+ + + T
Sbjct: 210 SYL-PITGKCLHDILKLQ-HLEELLLEGCFGVDDDSLKSLRHDCKSLKKLDASSCQNLTH 267
Query: 235 AAYRE-ISLLTRLKFLDLCGAQN-LSDQGLHCISKCKDLVSLNLTWCVRVTDEGVIAVAQ 292
+S L+ LDL + +S + K L S+ L C VT +G+ A+
Sbjct: 268 RGLTSLLSGAGYLQRLDLSHCSSVISLDFASSLKKVSALQSIRLDGC-SVTPDGLKAIGT 326
Query: 293 GCTSLEFLSLFGIVGVTDKCLEALSKSCSDKITTLDVNGCIGIKKRSREELLQLFPYLKC 352
C SL+ +SL V VTD+ L +L D + LD+ C + + S ++ P L
Sbjct: 327 LCNSLKEVSLSKCVSVTDEGLSSLVMKLKD-LRKLDITCCRKLSRVSITQIANSCPLLVS 385
Query: 353 FKVHS 357
K+ S
Sbjct: 386 LKMES 390
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 192 YPELESLNLTRCIKVTDDGLKPLLHQCLS---LQSLNLYALSSFTDAAYREISL-LTRLK 247
Y L+LT C +VTD L + CLS L+SL+L SF+ A ++L L
Sbjct: 71 YRNTTDLDLTFCPRVTDYALSVV--GCLSGPTLRSLDLSRSGSFSAAGLLRLALKCVNLV 128
Query: 248 FLDLCGAQNLSDQGLHCISKCKDLVSLNLTWCVRVTDEGVIAVAQGCTSLEFLSLFGIVG 307
+DL A + D +++ + L L L C +TD G+ +A GC L +SL VG
Sbjct: 129 EIDLSNATEMRDADAAVVAEARSLERLKLGRCKMLTDMGIGCIAVGCKKLNTVSLKWCVG 188
Query: 308 VTDKCLEALSKSCSDKITTLDVN 330
V D + L+ C D I TLD++
Sbjct: 189 VGDLGVGLLAVKCKD-IRTLDLS 210
>AT1G55590.1 | Symbols: | RNI-like superfamily protein |
chr1:20769476-20771756 REVERSE LENGTH=607
Length = 607
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 41/273 (15%)
Query: 76 LAALSLPRYRYVKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIEA 135
L +LSL R Y ++I + + D + L+ + C + LES+ L G K+SD G
Sbjct: 279 LTSLSLVRTCYNRKISF---KRINDMGIFLLSEAC----KGLESVRLGGFPKVSDAGF-- 329
Query: 136 ITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPEL 195
SLLH+ RN K + G ++D V + L
Sbjct: 330 ---------------------ASLLHSCRNLKK---FEVRGAFLLSDLAFHDVTGSSCSL 365
Query: 196 ESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLCGAQ 255
+ + L+ C +T + +K L C +L+ L+L + S +D+ +S L +L L+L GA
Sbjct: 366 QEVRLSTCPLITSEAVKK-LGLCGNLEVLDLGSCKSISDSCLNSVSALRKLTSLNLAGA- 423
Query: 256 NLSDQGLHCISKCK-DLVSLNLTWCVRVTDEGV--IAVAQGCTS--LEFLSLFGIVGVTD 310
+++D G+ + K + L+L C RV+D G+ + +G S L L L + G++D
Sbjct: 424 DVTDSGMLALGKSDVPITQLSLRGCRRVSDRGISYLLNNEGTISKTLSTLDLGHMPGISD 483
Query: 311 KCLEALSKSCSDKITTLDVNGCIGIKKRSREEL 343
+ + ++ C +T L + C + S E L
Sbjct: 484 RAIHTITH-CCKALTELSIRSCFHVTDSSIESL 515
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 111/257 (43%), Gaps = 47/257 (18%)
Query: 128 ISDTGIEAITSCCPQLKTFSI--------YWNVRVTDTSLLHTVRNCKHIVDLN-ISGC- 177
ISD I AIT PQL + + + +T T L + C+ + L+ + C
Sbjct: 231 ISDRLIIAITGSLPQLVKLDLEDRPEKEPFPDNDLTYTGL-QALGFCQQLTSLSLVRTCY 289
Query: 178 ------KQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCL------------ 219
K+I D GI ++E LES+ L KV+D G LLH C
Sbjct: 290 NRKISFKRINDMGIFLLSEACKGLESVRLGGFPKVSDAGFASLLHSCRNLKKFEVRGAFL 349
Query: 220 --------------SLQSLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLHCI 265
SLQ + L T A +++ L L+ LDL +++SD L+ +
Sbjct: 350 LSDLAFHDVTGSSCSLQEVRLSTCPLITSEAVKKLGLCGNLEVLDLGSCKSISDSCLNSV 409
Query: 266 SKCKDLVSLNLTWCVRVTDEGVIAVAQGCTSLEFLSLFGIVGVTDKCLEAL---SKSCSD 322
S + L SLNL VTD G++A+ + + LSL G V+D+ + L + S
Sbjct: 410 SALRKLTSLNLAG-ADVTDSGMLALGKSDVPITQLSLRGCRRVSDRGISYLLNNEGTISK 468
Query: 323 KITTLDVNGCIGIKKRS 339
++TLD+ GI R+
Sbjct: 469 TLSTLDLGHMPGISDRA 485
>AT5G21900.1 | Symbols: | RNI-like superfamily protein |
chr5:7238239-7240338 FORWARD LENGTH=544
Length = 544
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%)
Query: 116 SLESLNLNGCQKISD-TGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIV-DLN 173
+L L++ GCQ I G + +L S+ V V D + I+ DL+
Sbjct: 309 TLRGLSIGGCQGIKKHKGFSSSLYKFEKLNYLSVAGLVSVNDGVVRSFFMFRSSILTDLS 368
Query: 174 ISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFT 233
++ C ++TD+ + + +LE+L++T K+TD L+ + C L+SL L + + F+
Sbjct: 369 LANCNEVTDECMWHIGRYCKKLEALDITDLDKLTDKSLEFITEGCRYLKSLKLTS-NRFS 427
Query: 234 D---AAYREISLLTRLKFLDLCGAQNLSDQGLHCISK-CKDLVSLNLTWCVRVTDEGVIA 289
D AA+ E+S + L+ L L +++ + ++K CK L L+L+WC R+ ++ +
Sbjct: 428 DECIAAFLEVSGGS-LRELCLNKVRDVGPETAFSLAKVCKMLQFLDLSWCRRLKEDDLRR 486
Query: 290 VAQGCTSLEFLSLFGIVGVTDKCLEALSKS 319
+ + C+SL+ L LFG V D LE LS+S
Sbjct: 487 ILRCCSSLQSLKLFGWTQVEDTYLEELSRS 516
>AT2G17020.1 | Symbols: | F-box/RNI-like superfamily protein |
chr2:7396559-7398787 REVERSE LENGTH=656
Length = 656
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 125/275 (45%), Gaps = 48/275 (17%)
Query: 65 FREVNNAGNRLLAALSLPRYRYVKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNG 124
E+N G L LSL R ++ + R V D ++ + DKC +E++ L G
Sbjct: 285 LHEINQNGK--LKHLSLIRS---QEFHPTYFRRVSDQGMLFLADKCL----GMETICLGG 335
Query: 125 CQKISDTGIEAITSCCPQLKTFSIYWNVRVTDT---SLLHTVRNCKHIVDLNISGCKQIT 181
+++D G + I C L FSIY ++TD +L T + H+ ++ C +T
Sbjct: 336 FCRVTDAGFKTILHSCASLSKFSIYHGPKLTDLVFHDILATTLSLSHV---SLRRCHLLT 392
Query: 182 DQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREIS 241
D IQ +A + +LE+L+L C + D+ L + H
Sbjct: 393 DHAIQKLASSL-KLENLDLRGCRNLRDETLTAVSH------------------------- 426
Query: 242 LLTRLKFLDLCGAQNLSDQGLHCISK--CKDLVSLNLTWCVRVTDEGVIAVAQGCTSLEF 299
L +LK L L GA ++SD GL + + LVSL++ C +TD+ + + G + L
Sbjct: 427 -LPKLKVLLLDGA-DISDTGLSYLKEGVLDSLVSLSVRGCRNLTDKFMSTLFDGSSKLAL 484
Query: 300 --LSLFGIVGVTDKCLEALSKSCSDKITTLDVNGC 332
L L + +TD + AL+KS + IT L + C
Sbjct: 485 RELDLSNLPNLTDAAIFALAKSGA-PITKLQLREC 518
>AT5G51370.2 | Symbols: | RNI-like superfamily protein |
chr5:20872783-20874192 FORWARD LENGTH=446
Length = 446
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 9/215 (4%)
Query: 75 LLAALSLPRYRYVKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIE 134
+ A +L R V +D ++ V D L + C +SL L L+GC+ D GI+
Sbjct: 192 IAACKNLKGLRLVGSVDGLYSSSVSDIGLTFLAQGC----RSLVKLELSGCEGSFD-GIK 246
Query: 135 AITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQI-TDQGIQFVAENYP 193
AI CC L+ SI + R+ D + + + + L IS C++I G + + + P
Sbjct: 247 AIGQCCEVLEELSIC-DHRMDD-GWIAALSYFESLKILRISSCRKIDASPGPEKLLRSCP 304
Query: 194 ELESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLCG 253
+ESL L RC +G+K L C +N+ +D + R++FL L G
Sbjct: 305 AMESLQLKRCCLNDKEGIKALFKVCDGATEVNIQDCWGLSDDCFSLAKAFRRVRFLSLEG 364
Query: 254 AQNLSDQGLH-CISKCKDLVSLNLTWCVRVTDEGV 287
L+ GL I ++L S+ + C + D +
Sbjct: 365 CSVLTSGGLESVILHWEELESMRVVSCKSIKDSEI 399
>AT5G51380.1 | Symbols: | RNI-like superfamily protein |
chr5:20875945-20877779 FORWARD LENGTH=479
Length = 479
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 9/215 (4%)
Query: 85 RYVKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIEAITSCCPQLK 144
R V +D ++ V D L ++ C + L L L+GC+ D GI+AI CC L+
Sbjct: 238 RLVGSVDGLYSSSVSDIGLTILAQGC----KRLVKLELSGCEGSFD-GIKAIGQCCEVLE 292
Query: 145 TFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQI-TDQGIQFVAENYPELESLNLTRC 203
SI + R+ D + + + + L IS C++I + G + + P LESL L RC
Sbjct: 293 ELSIC-DHRMDD-GWIAALSYFESLKTLLISSCRKIDSSPGPGKLLGSCPALESLQLRRC 350
Query: 204 IKVTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLH 263
+G++ L C + +N+ D ++ R++FL L G L+ GL
Sbjct: 351 CLNDKEGMRALFKVCDGVTKVNIQDCWGLDDDSFSLAKAFRRVRFLSLEGCSILTTSGLE 410
Query: 264 -CISKCKDLVSLNLTWCVRVTDEGVIAVAQGCTSL 297
I ++L S+ + C + D + A SL
Sbjct: 411 SVILHWEELESMRVVSCKNIKDSEISAALSSLFSL 445
>AT3G07550.2 | Symbols: | RNI-like superfamily protein |
chr3:2409946-2411133 FORWARD LENGTH=395
Length = 395
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 107/270 (39%), Gaps = 57/270 (21%)
Query: 92 LEFARHVEDTHLILIKDKCFDSLQ----SLESLNLNGCQKISDTGIEAITSCCPQLKTFS 147
++ H+ + ++ D DSL+ L +L L+ C ISD GI I S CP L S
Sbjct: 90 FQWLEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDCCFGISDDGISTIASFCPNLSVVS 149
Query: 148 IYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVT 207
+Y C I+D G++ +A L+ +NL+ C V+
Sbjct: 150 LY---------------RCN------------ISDIGLETLARASLSLKCVNLSYCPLVS 182
Query: 208 DDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLC--------------G 253
D G+K L CL L+S+ + S T + S D C G
Sbjct: 183 DFGIKALSQACLQLESVKISNCKSITGVGFSGCSPTLGYVDADSCQLEPKGITGIISGGG 242
Query: 254 AQNLSDQGLHCISKCKDLVS-----------LNLTWCVRVTDEGVIAVAQGCTSLEFLSL 302
+ L+ G+ C + LV LNL C V DE + A+A+GC L+ +L
Sbjct: 243 IEFLNISGVSCYIRKDGLVPIGSGIASKLRILNLRMCRTVGDESIEAIAKGCPLLQEWNL 302
Query: 303 FGIVGVTDKCLEALSKSCSDKITTLDVNGC 332
V EA+ K C + + L VN C
Sbjct: 303 ALCHEVKISGWEAVGKWCRN-LKKLHVNRC 331
>AT3G07550.1 | Symbols: | RNI-like superfamily protein |
chr3:2409946-2411133 FORWARD LENGTH=395
Length = 395
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 107/270 (39%), Gaps = 57/270 (21%)
Query: 92 LEFARHVEDTHLILIKDKCFDSLQ----SLESLNLNGCQKISDTGIEAITSCCPQLKTFS 147
++ H+ + ++ D DSL+ L +L L+ C ISD GI I S CP L S
Sbjct: 90 FQWLEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDCCFGISDDGISTIASFCPNLSVVS 149
Query: 148 IYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVT 207
+Y C I+D G++ +A L+ +NL+ C V+
Sbjct: 150 LY---------------RCN------------ISDIGLETLARASLSLKCVNLSYCPLVS 182
Query: 208 DDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLC--------------G 253
D G+K L CL L+S+ + S T + S D C G
Sbjct: 183 DFGIKALSQACLQLESVKISNCKSITGVGFSGCSPTLGYVDADSCQLEPKGITGIISGGG 242
Query: 254 AQNLSDQGLHCISKCKDLVS-----------LNLTWCVRVTDEGVIAVAQGCTSLEFLSL 302
+ L+ G+ C + LV LNL C V DE + A+A+GC L+ +L
Sbjct: 243 IEFLNISGVSCYIRKDGLVPIGSGIASKLRILNLRMCRTVGDESIEAIAKGCPLLQEWNL 302
Query: 303 FGIVGVTDKCLEALSKSCSDKITTLDVNGC 332
V EA+ K C + + L VN C
Sbjct: 303 ALCHEVKISGWEAVGKWCRN-LKKLHVNRC 331
>AT4G33210.1 | Symbols: SLOMO | F-box family protein |
chr4:16015971-16020697 REVERSE LENGTH=990
Length = 990
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 129/324 (39%), Gaps = 73/324 (22%)
Query: 58 PLWQSLIFREVNNAG-----NRLLAALSLPRYRYVKQIDLEFARHVEDTHLILIKDKCFD 112
P+ +SLI + N LA+LSL R V ++L+ R I+ C D
Sbjct: 579 PMLKSLILDNCESLTAVRFCNSSLASLSLVGCRAVTSLELKCPR---------IEQICLD 629
Query: 113 SLQSLE----------SLNLNGCQKISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHT 162
LE SLNL C K+S IEA P + + + +++ S++
Sbjct: 630 GCDHLETAFFQPVALRSLNLGICPKLSVLNIEA-----PYMVSLELKGCGVLSEASIM-- 682
Query: 163 VRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDG------------ 210
C + L+ S C Q+ D + + P +ESL L C + DG
Sbjct: 683 ---CPLLTSLDASFCSQLRDDCLSATTASCPLIESLVLMSCPSIGSDGLSSLNGLPNLTV 739
Query: 211 ----------LKPLLHQCLSLQSLNLYALSSFTDAA----YREISLLTRLKFLDLCGA-- 254
L+P+ C+ L+ L L A TD++ Y+E L L+ LDL
Sbjct: 740 LDLSYTFLMNLEPVFKSCIQLKVLKLQACKYLTDSSLEPLYKE-GALPALEELDLSYGTL 798
Query: 255 -QNLSDQGLHCISKCKDLVSLNLTWCVRVTDEGVIAVAQGCTSLEFLSLFGIVGVTDKCL 313
Q D L C C L L+L CV + D + G TS+ FG+ +D
Sbjct: 799 CQTAIDDLLAC---CTHLTHLSLNGCVNMHD-----LDWGSTSVHLFDYFGVYSSSDNTQ 850
Query: 314 EALSKSCSDKITTLDVNGCIGIKK 337
E +++ + + L+ GC I+K
Sbjct: 851 EP-AETANRLLQNLNCVGCPNIRK 873
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 31/222 (13%)
Query: 127 KISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQ 186
KI+ + ++ CPQL++ S+ +++ + NC + L+I+ C ++ D I+
Sbjct: 335 KITKCRVMRLSIRCPQLRSLSL------KRSNMSQAMLNCPLLQLLDIASCHKLLDAAIR 388
Query: 187 FVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSLQSLN--------------------- 225
A + P+LESL+++ C V+D+ L+ + C +L LN
Sbjct: 389 SAAISCPQLESLDVSNCSCVSDETLREIAQACANLHILNASYCPNISLESVHLPMLTVLK 448
Query: 226 LYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLHCISKCKDLVSLNLTWCVRVTDE 285
L++ T A+ I+ L+ L+L L+ LH +S+ L S++L C + TD
Sbjct: 449 LHSCEGITSASMTWIANSPALEVLELDNCNLLTTVSLH-LSR---LQSISLVHCRKFTDL 504
Query: 286 GVIAVAQGCTSLEFLSLFGIVGVTDKCLEALSKSCSDKITTL 327
+ ++ ++ + +T L L+ + +TTL
Sbjct: 505 NLQSIMLSSITVSNCPALRRITITSNALRRLALQKQENLTTL 546
>AT1G80630.1 | Symbols: | RNI-like superfamily protein |
chr1:30308879-30310615 REVERSE LENGTH=578
Length = 578
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 28/217 (12%)
Query: 155 TDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPL 214
T +L+ + + +V LN+ G ++D+ + + + L LNL+ C K+T +
Sbjct: 281 TFDGILYLLDKYQSLVHLNLKGANFLSDEMVMKLGMFFRRLTFLNLSFCSKLTGLAFFSI 340
Query: 215 LHQCLSLQSLNLYALSSFTDAAYREIS--LLTRLKFLDLCGAQNLSDQGLHCISK-CKDL 271
+ +C+SL+ + + ++F Y + + + +KFL L NL D+ L IS+ C +
Sbjct: 341 IERCVSLRCMIMVG-TNFGVEEYTKDTKDFKSGVKFLYLSRNHNLLDECLEKISRHCPFI 399
Query: 272 VSLNLTWCVRVTDEGVIAVAQGCTSLEFLSL--------FGIVG---------------V 308
SL++ C +T +G++ V + C L L + G+V +
Sbjct: 400 ESLDVAQCPGITRDGILEVWRNCGKLRSLDISRCTGIKSLGVVDFELPKLESLRACGTWI 459
Query: 309 TDKCLEALSKSCSDKITTLDVNGCIGIKKRSREELLQ 345
D+ L+ +SK C + LD+ GC+ + R +E++Q
Sbjct: 460 DDEALDMISKKCR-GLLHLDLQGCLNVSSRGVKEVVQ 495
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 110/225 (48%), Gaps = 11/225 (4%)
Query: 81 LPRYRYVKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIEAITSCC 140
L +Y+ + ++L+ A + D +++K F + L LNL+ C K++ +I C
Sbjct: 289 LDKYQSLVHLNLKGANFLSDE--MVMKLGMF--FRRLTFLNLSFCSKLTGLAFFSIIERC 344
Query: 141 PQLK-TFSIYWNVRVTDTSLLHTVRNCKHIVD-LNISGCKQITDQGIQFVAENYPELESL 198
L+ + N V + + ++ K V L +S + D+ ++ ++ + P +ESL
Sbjct: 345 VSLRCMIMVGTNFGVEEYT--KDTKDFKSGVKFLYLSRNHNLLDECLEKISRHCPFIESL 402
Query: 199 NLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLS 258
++ +C +T DG+ + C L+SL++ + + L +L+ L CG +
Sbjct: 403 DVAQCPGITRDGILEVWRNCGKLRSLDISRCTGIKSLGVVDFE-LPKLESLRACGTW-ID 460
Query: 259 DQGLHCIS-KCKDLVSLNLTWCVRVTDEGVIAVAQGCTSLEFLSL 302
D+ L IS KC+ L+ L+L C+ V+ GV V Q C L ++L
Sbjct: 461 DEALDMISKKCRGLLHLDLQGCLNVSSRGVKEVVQSCIRLREINL 505
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 72/292 (24%)
Query: 126 QKISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGI 185
++SD+G+ ++S L +I N +TD SL+ +NC + ++ C I+ I
Sbjct: 148 SRVSDSGVIELSSNLKGLLKINISGNSFITDKSLIALSQNCLLLREIIFRDCDFISSDCI 207
Query: 186 QFVAENYPELESLNLTRCIKVTDDGLKP---------LLHQCLSLQSLNLYALS------ 230
+FV N LESL + GL+P L +CL+ L+ LS
Sbjct: 208 KFVLRNSRNLESL------AINGIGLRPRESLLTDAFLFARCLTELDLSDSFLSDDLLCL 261
Query: 231 -----------------SFT-DAAYREISLLTRLKFLDLCGAQNLSDQGLHCISK-CKDL 271
FT D + L L+L GA LSD+ + + + L
Sbjct: 262 IASAKLPLKKLLLSDCHGFTFDGILYLLDKYQSLVHLNLKGANFLSDEMVMKLGMFFRRL 321
Query: 272 VSLNLTWCVRVTDEGVIAVAQGCTSLEFLSL----FGIVGVT------------------ 309
LNL++C ++T ++ + C SL + + FG+ T
Sbjct: 322 TFLNLSFCSKLTGLAFFSIIERCVSLRCMIMVGTNFGVEEYTKDTKDFKSGVKFLYLSRN 381
Query: 310 ----DKCLEALSKSCSDKITTLDVNGCIGIKKRSREELLQLFPYLKCFKVHS 357
D+CLE +S+ C I +LDV C GI +R+ +L++ + C K+ S
Sbjct: 382 HNLLDECLEKISRHCP-FIESLDVAQCPGI---TRDGILEV--WRNCGKLRS 427
>AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 |
chr1:17276103-17277659 REVERSE LENGTH=518
Length = 518
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 22/250 (8%)
Query: 83 RYRYVKQIDLEFARH---VEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIEAITSC 139
R+ V ++ L+ R + D L+ I +C ++L+ L L C++++D G+ A
Sbjct: 99 RFDSVTKLSLKCDRRSVSIGDEALVKISLRC----RNLKRLKLRACRELTDVGMAAFAEN 154
Query: 140 CPQLKTFSIY---WNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELE 196
C LK FS + + L H C ++ +L+I + TD + + P +
Sbjct: 155 CKDLKIFSCGSCDFGAKGVKAVLDH----CSNLEELSIKRLRGFTDIAPEMIG---PGVA 207
Query: 197 SLNLTR-CIKVTDDG--LKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLCG 253
+ +L C+K +G P++ +L+SL L+ S D +E+S
Sbjct: 208 ASSLKSICLKELYNGQCFGPVIVGAKNLKSLKLFRCSGDWDLLLQEMSGKDHGVVEIHLE 267
Query: 254 AQNLSDQGLHCISKCKDLVSLNLTWCVRVTDEGVIAVAQGCTSLEFLSLFGIVG--VTDK 311
+SD L IS C L SL+L T+ G+ A+A+ C L L + G + D+
Sbjct: 268 RMQVSDVALSAISYCSSLESLHLVKTPECTNFGLAAIAEKCKRLRKLHIDGWKANLIGDE 327
Query: 312 CLEALSKSCS 321
L A++K CS
Sbjct: 328 GLVAVAKFCS 337
>AT1G80570.2 | Symbols: | RNI-like superfamily protein |
chr1:30290661-30292231 FORWARD LENGTH=480
Length = 480
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 33/221 (14%)
Query: 115 QSLESLNLNGCQKISDTGIEAITSCCPQLKTFSIY------------WNVRVTDTSLLHT 162
++LE L+L+ C +SD+ I A+ L++ S+ +R+TD SL
Sbjct: 274 KNLEKLHLDMCTGVSDSDIIALVQKASHLRSISLRVPSDFTLPLLNNITLRLTDESLSAI 333
Query: 163 VRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSLQ 222
++C + IS F +P L S L G+ L+ +C ++
Sbjct: 334 AQHCSKLESFKIS-----------FSDGEFPSLFSFTL--------QGIITLIQKC-PVR 373
Query: 223 SLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLHCISKCKDLVSLNLTWCVRV 282
L+L + F D + +L+ L+L Q +SD+GL +S+ L L L+ C+ V
Sbjct: 374 ELSLDHVCVFNDMGMEALCSAQKLEILELVHCQEVSDEGLILVSQFPSLNVLKLSKCLGV 433
Query: 283 TDEGVIAVAQGCTSLEFLSLFGIVGVTDKCLEALSKSCSDK 323
TD+G+ + G LE L + V+ + + + S S K
Sbjct: 434 TDDGMRPLV-GSHKLELLVVEDCPQVSRRGVHGAATSVSFK 473
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 111/283 (39%), Gaps = 57/283 (20%)
Query: 111 FDSLQSLESLNLNGCQKISDTGIEAITSCCPQLKTFSI-----YWNVRVTD----TSLLH 161
F L++LE L + C+ I + + + + +L + Y ++V D
Sbjct: 183 FGKLETLEELCIKNCRAIGEGDLIKLRNSWRKLTSLQFEVDANYRYMKVYDQLDVERWPK 242
Query: 162 TVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSL 221
+ C +V+L++ C +G+ V N LE L+L C V+D + L+ + L
Sbjct: 243 QLVPCDSLVELSLGNCIIAPGRGLACVLRNCKNLEKLHLDMCTGVSDSDIIALVQKASHL 302
Query: 222 QSLNLYALSSFTDAAYREISL-LT-----------------RLKFLD------------- 250
+S++L S FT I+L LT ++ F D
Sbjct: 303 RSISLRVPSDFTLPLLNNITLRLTDESLSAIAQHCSKLESFKISFSDGEFPSLFSFTLQG 362
Query: 251 ------LCGAQNLS--------DQGLHCISKCKDLVSLNLTWCVRVTDEGVIAVAQGCTS 296
C + LS D G+ + + L L L C V+DEG+I V+Q S
Sbjct: 363 IITLIQKCPVRELSLDHVCVFNDMGMEALCSAQKLEILELVHCQEVSDEGLILVSQ-FPS 421
Query: 297 LEFLSLFGIVGVTDKCLEALSKSCSDKITTLDVNGCIGIKKRS 339
L L L +GVTD + L S K+ L V C + +R
Sbjct: 422 LNVLKLSKCLGVTDDGMRPLVG--SHKLELLVVEDCPQVSRRG 462
>AT1G80570.1 | Symbols: | RNI-like superfamily protein |
chr1:30290828-30292231 FORWARD LENGTH=467
Length = 467
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 33/221 (14%)
Query: 115 QSLESLNLNGCQKISDTGIEAITSCCPQLKTFSIY------------WNVRVTDTSLLHT 162
++LE L+L+ C +SD+ I A+ L++ S+ +R+TD SL
Sbjct: 261 KNLEKLHLDMCTGVSDSDIIALVQKASHLRSISLRVPSDFTLPLLNNITLRLTDESLSAI 320
Query: 163 VRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSLQ 222
++C + IS F +P L S L G+ L+ +C ++
Sbjct: 321 AQHCSKLESFKIS-----------FSDGEFPSLFSFTL--------QGIITLIQKC-PVR 360
Query: 223 SLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLHCISKCKDLVSLNLTWCVRV 282
L+L + F D + +L+ L+L Q +SD+GL +S+ L L L+ C+ V
Sbjct: 361 ELSLDHVCVFNDMGMEALCSAQKLEILELVHCQEVSDEGLILVSQFPSLNVLKLSKCLGV 420
Query: 283 TDEGVIAVAQGCTSLEFLSLFGIVGVTDKCLEALSKSCSDK 323
TD+G+ + G LE L + V+ + + + S S K
Sbjct: 421 TDDGMRPLV-GSHKLELLVVEDCPQVSRRGVHGAATSVSFK 460
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 111/283 (39%), Gaps = 57/283 (20%)
Query: 111 FDSLQSLESLNLNGCQKISDTGIEAITSCCPQLKTFSI-----YWNVRVTD----TSLLH 161
F L++LE L + C+ I + + + + +L + Y ++V D
Sbjct: 170 FGKLETLEELCIKNCRAIGEGDLIKLRNSWRKLTSLQFEVDANYRYMKVYDQLDVERWPK 229
Query: 162 TVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSL 221
+ C +V+L++ C +G+ V N LE L+L C V+D + L+ + L
Sbjct: 230 QLVPCDSLVELSLGNCIIAPGRGLACVLRNCKNLEKLHLDMCTGVSDSDIIALVQKASHL 289
Query: 222 QSLNLYALSSFTDAAYREISL-LT-----------------RLKFLD------------- 250
+S++L S FT I+L LT ++ F D
Sbjct: 290 RSISLRVPSDFTLPLLNNITLRLTDESLSAIAQHCSKLESFKISFSDGEFPSLFSFTLQG 349
Query: 251 ------LCGAQNLS--------DQGLHCISKCKDLVSLNLTWCVRVTDEGVIAVAQGCTS 296
C + LS D G+ + + L L L C V+DEG+I V+Q S
Sbjct: 350 IITLIQKCPVRELSLDHVCVFNDMGMEALCSAQKLEILELVHCQEVSDEGLILVSQ-FPS 408
Query: 297 LEFLSLFGIVGVTDKCLEALSKSCSDKITTLDVNGCIGIKKRS 339
L L L +GVTD + L S K+ L V C + +R
Sbjct: 409 LNVLKLSKCLGVTDDGMRPLVG--SHKLELLVVEDCPQVSRRG 449
>AT1G80570.3 | Symbols: | RNI-like superfamily protein |
chr1:30290828-30292231 FORWARD LENGTH=467
Length = 467
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 33/221 (14%)
Query: 115 QSLESLNLNGCQKISDTGIEAITSCCPQLKTFSIY------------WNVRVTDTSLLHT 162
++LE L+L+ C +SD+ I A+ L++ S+ +R+TD SL
Sbjct: 261 KNLEKLHLDMCTGVSDSDIIALVQKASHLRSISLRVPSDFTLPLLNNITLRLTDESLSAI 320
Query: 163 VRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSLQ 222
++C + IS F +P L S L G+ L+ +C ++
Sbjct: 321 AQHCSKLESFKIS-----------FSDGEFPSLFSFTL--------QGIITLIQKC-PVR 360
Query: 223 SLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLHCISKCKDLVSLNLTWCVRV 282
L+L + F D + +L+ L+L Q +SD+GL +S+ L L L+ C+ V
Sbjct: 361 ELSLDHVCVFNDMGMEALCSAQKLEILELVHCQEVSDEGLILVSQFPSLNVLKLSKCLGV 420
Query: 283 TDEGVIAVAQGCTSLEFLSLFGIVGVTDKCLEALSKSCSDK 323
TD+G+ + G LE L + V+ + + + S S K
Sbjct: 421 TDDGMRPLV-GSHKLELLVVEDCPQVSRRGVHGAATSVSFK 460
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 111/283 (39%), Gaps = 57/283 (20%)
Query: 111 FDSLQSLESLNLNGCQKISDTGIEAITSCCPQLKTFSI-----YWNVRVTD----TSLLH 161
F L++LE L + C+ I + + + + +L + Y ++V D
Sbjct: 170 FGKLETLEELCIKNCRAIGEGDLIKLRNSWRKLTSLQFEVDANYRYMKVYDQLDVERWPK 229
Query: 162 TVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSL 221
+ C +V+L++ C +G+ V N LE L+L C V+D + L+ + L
Sbjct: 230 QLVPCDSLVELSLGNCIIAPGRGLACVLRNCKNLEKLHLDMCTGVSDSDIIALVQKASHL 289
Query: 222 QSLNLYALSSFTDAAYREISL-LT-----------------RLKFLD------------- 250
+S++L S FT I+L LT ++ F D
Sbjct: 290 RSISLRVPSDFTLPLLNNITLRLTDESLSAIAQHCSKLESFKISFSDGEFPSLFSFTLQG 349
Query: 251 ------LCGAQNLS--------DQGLHCISKCKDLVSLNLTWCVRVTDEGVIAVAQGCTS 296
C + LS D G+ + + L L L C V+DEG+I V+Q S
Sbjct: 350 IITLIQKCPVRELSLDHVCVFNDMGMEALCSAQKLEILELVHCQEVSDEGLILVSQ-FPS 408
Query: 297 LEFLSLFGIVGVTDKCLEALSKSCSDKITTLDVNGCIGIKKRS 339
L L L +GVTD + L S K+ L V C + +R
Sbjct: 409 LNVLKLSKCLGVTDDGMRPLVG--SHKLELLVVEDCPQVSRRG 449
>AT2G06040.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Leucine-rich
repeat, cysteine-containing subtype
(InterPro:IPR006553); BEST Arabidopsis thaliana protein
match is: RNI-like superfamily protein
(TAIR:AT5G21900.1); Has 5028 Blast hits to 2547 proteins
in 240 species: Archae - 0; Bacteria - 125; Metazoa -
2326; Fungi - 765; Plants - 1373; Viruses - 0; Other
Eukaryotes - 439 (source: NCBI BLink). |
chr2:2352333-2355419 REVERSE LENGTH=762
Length = 762
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 8/209 (3%)
Query: 108 DKCFDSLQS-LESLNLNGCQKISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTV-RN 165
D DSL S L L +N CQ I I A +L+ S+ V L V
Sbjct: 528 DMLSDSLGSVLRELYINECQNIDMKHILAALKKFEKLEVLSLADLPSVKGRFLKEFVTAR 587
Query: 166 CKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSLQSLN 225
+ + L ++ ++++D I+ ++EN P L L+L K+TD L L + C +L+ L
Sbjct: 588 GQTLKQLILTNSRKLSDSSIKVISENCPNLSVLDLANVCKLTDSSLGYLANGCQALEKL- 646
Query: 226 LYALSSFTD---AAYREISLLTRLKFLDLCGAQNLSDQGLHCISKCKD-LVSLNLTWCVR 281
++ + F+D AA+ E + + LK L L + + ++K D L L+++WC
Sbjct: 647 IFCRNPFSDEAVAAFVETAGGS-LKELSLNNVKKVGHNTALALAKHSDKLQILDISWCRE 705
Query: 282 VTDEGVIAVAQGCTSLEFLSLFGIVGVTD 310
++++ + + +SL+ L +FG VTD
Sbjct: 706 MSNDLLGYIVDNSSSLKVLKVFGCSQVTD 734
>AT5G67140.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:26794009-26795213 REVERSE LENGTH=228
Length = 228
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 124 GCQKISDTGIEAITS--CCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQIT 181
GC I+D G+ I S C L + S++ +TD+ ++ + + LNI G IT
Sbjct: 85 GCH-ITDNGLYQIASARCVSNLNSVSLWGMTAITDSGVVQLISRTSSLQHLNIGGTF-IT 142
Query: 182 DQGIQFVAENYPELESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTD--AAYRE 239
D+ + +AE +L+++ + C VT+ GL L+++C L+S+NL+ D A
Sbjct: 143 DESLFAIAERCHQLKTIGMWCCRHVTERGLLVLVNKCRKLESINLWGTRVPVDCFIALLT 202
Query: 240 ISLLTRLKFLD-LCGAQN 256
IS ++K ++ L AQN
Sbjct: 203 ISPALQIKPMELLLNAQN 220
>AT3G50080.1 | Symbols: VFB2 | VIER F-box proteine 2 |
chr3:18572788-18574356 FORWARD LENGTH=522
Length = 522
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
Query: 152 VRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLT--RCIKVTDD 209
++VTD L + C ++ L+I ++ G+ V E L L++ R ++ D
Sbjct: 267 LQVTDIGLFG-ISKCSNLETLHIVKTPDCSNLGLASVVERCKLLRKLHIDGWRVKRIGDQ 325
Query: 210 GLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLT----RLKFLDLCGAQNLSDQGLHCI 265
GL + CL+LQ L L + DA Y +S + +L+ L LCG+ + D + CI
Sbjct: 326 GLMSVAKHCLNLQELVLIGV----DATYMSLSAIASNCKKLERLALCGSGTIGDAEIGCI 381
Query: 266 S-KCKDLVSLNLTWCVRVTDEGVIAVAQGC 294
+ KC L + C+ ++D GV A+A GC
Sbjct: 382 AEKCVTLRKFCIKGCL-ISDVGVQALALGC 410
>AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting protein
2 | chr5:26831677-26833260 REVERSE LENGTH=527
Length = 527
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Query: 152 VRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLT--RCIKVTDD 209
++V+D L + C ++ L+I + ++ G+ +VAE L L++ R ++ D+
Sbjct: 273 LQVSDIGL-SAISKCSNVETLHIVKTPECSNFGLIYVAERCKLLRKLHIDGWRTNRIGDE 331
Query: 210 GLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLHCIS-KC 268
GL + CL+LQ L L +++ + S +L+ L LCG+ + D + CI+ KC
Sbjct: 332 GLLSVAKHCLNLQELVLIGVNATHMSLAAIASNCEKLERLALCGSGTIGDTEIACIARKC 391
Query: 269 KDLVSLNLTWCVRVTDEGVIAVAQGC 294
L + C V+D G+ A+A GC
Sbjct: 392 GALRKFCIKGCP-VSDRGIEALAVGC 416
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 62/282 (21%)
Query: 83 RYRYVKQIDLEFARH---VEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIEAITSC 139
R+ V ++ L R + D L +I +C + L + L GC++I+D G+E
Sbjct: 102 RFDSVTKLALRCDRKSVSLSDEALAMISVRCLN----LTRVKLRGCREITDLGMEDFAKN 157
Query: 140 CPQLKTFSI---YWNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAE--NYPE 194
C LK S+ + + + L H CK + +L++ K++ +GI AE + P+
Sbjct: 158 CKNLKKLSVGSCNFGAKGVNAMLEH----CKLLEELSV---KRL--RGIHEAAELIHLPD 208
Query: 195 LESLNLTR--CIKVTDDG--LKPLLHQCLSLQSLNLYALSSFTDAAYREI----SLLTRL 246
S + R C+K +G +PLL +L++L + D + I S L+ +
Sbjct: 209 DASSSSLRSICLKELVNGQVFEPLLATTRTLKTLKIIRCLGDWDKVLQMIANGKSSLSEI 268
Query: 247 KFLDLCGAQNLSDQGLHCISKCKDLVSLNLT---------------------------WC 279
L +SD GL ISKC ++ +L++ W
Sbjct: 269 HLERL----QVSDIGLSAISKCSNVETLHIVKTPECSNFGLIYVAERCKLLRKLHIDGWR 324
Query: 280 V-RVTDEGVIAVAQGCTSLEFLSLFGIVGVTDKCLEALSKSC 320
R+ DEG+++VA+ C +L+ L L G V T L A++ +C
Sbjct: 325 TNRIGDEGLLSVAKHCLNLQELVLIG-VNATHMSLAAIASNC 365
>AT5G51370.1 | Symbols: | RNI-like superfamily protein |
chr5:20872783-20873850 FORWARD LENGTH=355
Length = 355
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 8/164 (4%)
Query: 75 LLAALSLPRYRYVKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIE 134
+ A +L R V +D ++ V D L + C +SL L L+GC+ D GI+
Sbjct: 192 IAACKNLKGLRLVGSVDGLYSSSVSDIGLTFLAQGC----RSLVKLELSGCEGSFD-GIK 246
Query: 135 AITSCCPQLKTFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQI-TDQGIQFVAENYP 193
AI CC L+ SI D + + + + L IS C++I G + + + P
Sbjct: 247 AIGQCCEVLEELSIC--DHRMDDGWIAALSYFESLKILRISSCRKIDASPGPEKLLRSCP 304
Query: 194 ELESLNLTRCIKVTDDGLKPLLHQCLSLQSLNLYALSSFTDAAY 237
+ESL L RC +G+K L C +N+ +D +
Sbjct: 305 AMESLQLKRCCLNDKEGIKALFKVCDGATEVNIQDCWGLSDDCF 348
>AT1G15740.1 | Symbols: | Leucine-rich repeat family protein |
chr1:5411509-5414544 FORWARD LENGTH=585
Length = 585
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 97/204 (47%), Gaps = 36/204 (17%)
Query: 110 CFDSLQSLESL---NLNGCQKISDTGIEAITSCCPQLKTFSIYWNVRVTDTSLLHTVRNC 166
C D+L +L L NLN C SD+G E + LK ++ N +T++ L+H ++
Sbjct: 302 CLDTLTALAGLMYLNLNRCN-FSDSGCEKFSDLI-NLKILNLGMN-NITNSCLVH-LKGL 357
Query: 167 KHIVDLNISGCKQITDQGIQFVA-----------------------ENYPELESLNLTRC 203
+ LN+ C+ I D+G+ ++ LES+NL+
Sbjct: 358 TKLESLNLDSCR-IGDEGLVHLSGMLELKSLELSDTEVGSNGLRHLSGLSNLESINLSFT 416
Query: 204 IKVTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLH 263
+ VTD GL+ L SL++LNL A TDA ++ LT L LDL GA+ ++D G +
Sbjct: 417 V-VTDSGLRKL-SGLTSLRTLNLDA-RHVTDAGLSALTSLTGLTHLDLFGAR-ITDSGTN 472
Query: 264 CISKCKDLVSLNLTWCVRVTDEGV 287
+ K L SL + +TD GV
Sbjct: 473 HLRNLKKLQSLEICGG-GLTDTGV 495
>AT4G07400.1 | Symbols: VFB3 | VIER F-box proteine 3 |
chr4:4197847-4199511 REVERSE LENGTH=554
Length = 554
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 11/198 (5%)
Query: 160 LHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLT--RCIKVTDDGLKPLLHQ 217
L + C + L++ T+ G+ VAE L L++ + ++ D+GL +
Sbjct: 309 LTALSKCSGVEVLHLVKTPDCTNVGLALVAERCKLLRKLHIDGWKTNRIGDEGLIVVAKY 368
Query: 218 CLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLHCIS-KCKDLVSLNL 276
C +LQ L L ++ + +S L+ L LCG+ + D L CI+ KC L L +
Sbjct: 369 CWNLQELVLIGVNPTKLSLEAIVSNCLNLERLALCGSDTVGDTELCCIAEKCLALRKLCI 428
Query: 277 TWCVRVTDEGVIAVAQGCTSLEFLSLFGIVGVTDKCLEALSKSCSDKITTLD------VN 330
C +TD+G+ A+ GC +L + + GVT + + L K + + LD V
Sbjct: 429 KNCP-ITDDGIKALGNGCPNLLKVKVKKCRGVTTQGADLLRKRRALLVVNLDAPETPIVE 487
Query: 331 GCIGIKKRSREELLQLFP 348
G +G + ++E ++ P
Sbjct: 488 GSVG-EGGAQENAVEFPP 504
>AT5G07670.1 | Symbols: | RNI-like superfamily protein |
chr5:2430421-2432065 FORWARD LENGTH=476
Length = 476
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 7/181 (3%)
Query: 85 RYVKQIDLEFARHVEDTHLILIKDKCFDSLQSLESLNLNGCQKISDTGIEAITSCCPQLK 144
R V +D + V D L+++ C + L L L GC+ D GI+ I CC L+
Sbjct: 236 RLVGNVDGLYNSLVSDIGLMILAQGC----KRLVKLELVGCEGGFD-GIKEIGECCQMLE 290
Query: 145 TFSIYWNVRVTDTSLLHTVRNCKHIVDLNISGCKQITDQGIQFVAENYPELESLNLTRCI 204
++ N ++ L +R C+++ L + CK+I + + ++ P LE L L +C
Sbjct: 291 ELTVCDNK--MESGWLGGLRYCENLKTLKLVSCKKIDNDPDESLSCCCPALERLQLEKCQ 348
Query: 205 KVTDDGLKPLLHQCLSLQSLNLYALSSFTDAAYREISLLTRLKFLDLCGAQNLSDQGLHC 264
+ +K L C + + + + + R+K L L G L+ GL
Sbjct: 349 LRDKNTVKALFKMCEAAREIVFQDCWGLDNDIFSLAMAFGRVKLLYLEGCSLLTTSGLES 408
Query: 265 I 265
+
Sbjct: 409 V 409