Miyakogusa Predicted Gene

Lj5g3v0709800.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0709800.1 tr|F2UHZ8|F2UHZ8_SALS5 Transmembrane 7
superfamily member 2 OS=Salpingoeca sp. (strain ATCC 50818)
G,32.95,4e-19,ERG4_ERG24,Ergosterol biosynthesis ERG4/ERG24; seg,NULL;
C-14 STEROL REDUCTASE,NULL; STEROL REDUCTAS,CUFF.53830.1
         (195 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G52940.2 | Symbols: FK, HYD2, ELL1 | Ergosterol biosynthesis ...   191   2e-49
AT3G52940.1 | Symbols: FK, HYD2, ELL1 | Ergosterol biosynthesis ...   190   5e-49
AT1G50430.2 | Symbols: DWF5, PA, LE, ST7R, 7RED | Ergosterol bio...    48   5e-06

>AT3G52940.2 | Symbols: FK, HYD2, ELL1 | Ergosterol biosynthesis
           ERG4/ERG24 family | chr3:19631030-19633112 REVERSE
           LENGTH=262
          Length = 262

 Score =  191 bits (486), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 101/186 (54%), Positives = 118/186 (63%), Gaps = 4/186 (2%)

Query: 8   MDLGCPVHGLIPSWNSXXXXXXXXXXXXXXXSVVPGKLIAGVVLPDKSRLRYRCNGXXXX 67
           MDLG     L+PS  S                ++PGK+I GV+L D S+LRYRCNG    
Sbjct: 5   MDLGV----LLPSLQSVYVLVFYFVYLAVAGEILPGKVIRGVLLSDGSQLRYRCNGLLAL 60

Query: 68  XXXXXXXGIGAKMGFVSPTAISERGLELLSTTFIFSFLVALILYFXXXXXXXXXXXXXXX 127
                  GI AK+G VSP  +++RGLELLS TFIF  LV L LY                
Sbjct: 61  ILLVAILGICAKLGIVSPLVVADRGLELLSATFIFCVLVTLALYVTGRSSSNKGSSLKPH 120

Query: 128 XXGNLIHDWWFGIQLNPQVMGIDLKFFFVRAGMMGWLLINLSVLAKSIQDDTLSQSMILF 187
             GNL+HDWWFGIQLNPQ M IDLKFFFVRAGMMGWLLINLS+LAKS+QD +LSQSMIL+
Sbjct: 121 VSGNLVHDWWFGIQLNPQFMSIDLKFFFVRAGMMGWLLINLSILAKSVQDGSLSQSMILY 180

Query: 188 QLFCGV 193
           Q+FC +
Sbjct: 181 QIFCAL 186


>AT3G52940.1 | Symbols: FK, HYD2, ELL1 | Ergosterol biosynthesis
           ERG4/ERG24 family | chr3:19630369-19633112 REVERSE
           LENGTH=369
          Length = 369

 Score =  190 bits (483), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 101/186 (54%), Positives = 118/186 (63%), Gaps = 4/186 (2%)

Query: 8   MDLGCPVHGLIPSWNSXXXXXXXXXXXXXXXSVVPGKLIAGVVLPDKSRLRYRCNGXXXX 67
           MDLG     L+PS  S                ++PGK+I GV+L D S+LRYRCNG    
Sbjct: 5   MDLGV----LLPSLQSVYVLVFYFVYLAVAGEILPGKVIRGVLLSDGSQLRYRCNGLLAL 60

Query: 68  XXXXXXXGIGAKMGFVSPTAISERGLELLSTTFIFSFLVALILYFXXXXXXXXXXXXXXX 127
                  GI AK+G VSP  +++RGLELLS TFIF  LV L LY                
Sbjct: 61  ILLVAILGICAKLGIVSPLVVADRGLELLSATFIFCVLVTLALYVTGRSSSNKGSSLKPH 120

Query: 128 XXGNLIHDWWFGIQLNPQVMGIDLKFFFVRAGMMGWLLINLSVLAKSIQDDTLSQSMILF 187
             GNL+HDWWFGIQLNPQ M IDLKFFFVRAGMMGWLLINLS+LAKS+QD +LSQSMIL+
Sbjct: 121 VSGNLVHDWWFGIQLNPQFMSIDLKFFFVRAGMMGWLLINLSILAKSVQDGSLSQSMILY 180

Query: 188 QLFCGV 193
           Q+FC +
Sbjct: 181 QIFCAL 186


>AT1G50430.2 | Symbols: DWF5, PA, LE, ST7R, 7RED | Ergosterol
           biosynthesis ERG4/ERG24 family | chr1:18682175-18685555
           REVERSE LENGTH=431
          Length = 431

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 7/150 (4%)

Query: 40  VVPGKLIAGVVLPDKSRLRYRCNGXXXXXXXXXXXGIGAKMGFVSPTAISERGLELLSTT 99
           ++PGK + G + P  +R  Y+ NG            +G   G  +P  + +   E+ S  
Sbjct: 83  LLPGKRVEGPISPAGNRPVYKANGLAAYFVTLATY-LGLWFGIFNPAIVYDHLGEIFSAL 141

Query: 100 FIFSFLVALILYFXXXXXXXXXXXXXXXXXGNLIHDWWFGIQLNPQV-MGIDLKFFF-VR 157
              SF+  ++LY                  GNLI D+++G++L P++    D+K F   R
Sbjct: 142 IFGSFIFCVLLY---IKGHVAPSSSDSGSCGNLIIDFYWGMELYPRIGKSFDIKVFTNCR 198

Query: 158 AGMMGWLLINLSVLAKSIQ-DDTLSQSMIL 186
            GMM W ++ ++   K  + +  +S SM++
Sbjct: 199 FGMMSWAVLAVTYCIKQYEINGKVSDSMLV 228