Miyakogusa Predicted Gene
- Lj5g3v0705390.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0705390.1 tr|A7UQU8|A7UQU8_MEDTR Homeodomain-like;
Uridylate kinase OS=Medicago truncatula GN=MTR_1g061600 PE=,93.31,0,no
description,Aspartate/glutamate/uridylate kinase; seg,NULL;
AA_kinase,Aspartate/glutamate/uridyla,CUFF.53796.1
(360 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G10030.1 | Symbols: | aspartate/glutamate/uridylate kinase f... 499 e-141
AT3G10030.2 | Symbols: | aspartate/glutamate/uridylate kinase f... 470 e-133
AT3G18680.1 | Symbols: | Amino acid kinase family protein | chr... 249 2e-66
AT3G58630.1 | Symbols: | sequence-specific DNA binding transcri... 73 3e-13
AT3G14180.1 | Symbols: | sequence-specific DNA binding transcri... 72 4e-13
AT3G54390.1 | Symbols: | sequence-specific DNA binding transcri... 70 3e-12
AT2G44730.1 | Symbols: | Alcohol dehydrogenase transcription fa... 65 1e-10
AT3G24860.1 | Symbols: | Homeodomain-like superfamily protein |... 63 3e-10
AT3G24490.1 | Symbols: | Alcohol dehydrogenase transcription fa... 63 3e-10
AT3G11100.1 | Symbols: | sequence-specific DNA binding transcri... 52 8e-07
AT1G54060.1 | Symbols: ASIL1 | 6B-interacting protein 1-like 1 |... 50 2e-06
AT5G05550.1 | Symbols: | sequence-specific DNA binding transcri... 49 4e-06
AT5G05550.2 | Symbols: | sequence-specific DNA binding transcri... 49 5e-06
>AT3G10030.1 | Symbols: | aspartate/glutamate/uridylate kinase
family protein | chr3:3092277-3094831 REVERSE LENGTH=542
Length = 542
Score = 499 bits (1284), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/360 (66%), Positives = 290/360 (80%), Gaps = 1/360 (0%)
Query: 2 CLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVEQCKNKVDNLKKRYKLERH 61
CLL+AY++KFTQLNRGNLRGRDWEEVA+ VSERCE SKSVEQCKNK+DNLKKRYKLERH
Sbjct: 168 CLLDAYSDKFTQLNRGNLRGRDWEEVASSVSERCEKLSKSVEQCKNKIDNLKKRYKLERH 227
Query: 62 RMNNGCISSSHWPWFKQMEHIVGNSLPTK-FSDEDKALVPASNSPRQSKRYGVATPSSGG 120
RM++G ++SHWPWFK+ME IVGNSL K SDED++ N+ + ++RY + T + G
Sbjct: 228 RMSSGGTAASHWPWFKKMEDIVGNSLALKGASDEDRSGSSMGNTVKPARRYPLVTYNPGV 287
Query: 121 QVNSMKSKALSNLRWRRVVLKISGAALTGSDTCNLDPKVAMLVSSEVAIASRLGVEVVIV 180
Q+N++KSKA SN RWRRVVLKISGAAL + N+DPKV L++ EVA+A RLGVEV IV
Sbjct: 288 QINNVKSKATSNPRWRRVVLKISGAALACTGPNNIDPKVINLIAREVAMACRLGVEVAIV 347
Query: 181 VGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSLAMQEF 240
VG RNFFCG WVTATGL+R TAY + MMA+VMNS LLQS+LEK+GVQ R+QT++++Q
Sbjct: 348 VGSRNFFCGSTWVTATGLDRTTAYHISMMASVMNSALLQSSLEKIGVQARLQTAISVQGV 407
Query: 241 AEPYNRQRAIRHLEKXXXXXXXXXXXXXXNPLFSTDIAAALRASELNAQAVLKGTNVDGV 300
EPYNRQRA RHL+K NPL S+D +AALRA ++NA+AV+KGTNVDGV
Sbjct: 408 GEPYNRQRATRHLDKGRVVIFGGIGATLGNPLLSSDASAALRAIDINAEAVVKGTNVDGV 467
Query: 301 YDCNSRDNNFTFEHISFRELASRGVTSMDMSALTFCEENAIPVVVFNLLAPGNISKALCG 360
YDC+S+D+N TFEHISF++LASRG+TSMD AL FCEEN+IPVVVFN L GNI+KALCG
Sbjct: 468 YDCHSQDSNVTFEHISFQDLASRGLTSMDTMALNFCEENSIPVVVFNFLEAGNITKALCG 527
>AT3G10030.2 | Symbols: | aspartate/glutamate/uridylate kinase
family protein | chr3:3092618-3094831 REVERSE LENGTH=520
Length = 520
Score = 470 bits (1209), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/342 (65%), Positives = 275/342 (80%), Gaps = 1/342 (0%)
Query: 2 CLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVEQCKNKVDNLKKRYKLERH 61
CLL+AY++KFTQLNRGNLRGRDWEEVA+ VSERCE SKSVEQCKNK+DNLKKRYKLERH
Sbjct: 168 CLLDAYSDKFTQLNRGNLRGRDWEEVASSVSERCEKLSKSVEQCKNKIDNLKKRYKLERH 227
Query: 62 RMNNGCISSSHWPWFKQMEHIVGNSLPTK-FSDEDKALVPASNSPRQSKRYGVATPSSGG 120
RM++G ++SHWPWFK+ME IVGNSL K SDED++ N+ + ++RY + T + G
Sbjct: 228 RMSSGGTAASHWPWFKKMEDIVGNSLALKGASDEDRSGSSMGNTVKPARRYPLVTYNPGV 287
Query: 121 QVNSMKSKALSNLRWRRVVLKISGAALTGSDTCNLDPKVAMLVSSEVAIASRLGVEVVIV 180
Q+N++KSKA SN RWRRVVLKISGAAL + N+DPKV L++ EVA+A RLGVEV IV
Sbjct: 288 QINNVKSKATSNPRWRRVVLKISGAALACTGPNNIDPKVINLIAREVAMACRLGVEVAIV 347
Query: 181 VGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSLAMQEF 240
VG RNFFCG WVTATGL+R TAY + MMA+VMNS LLQS+LEK+GVQ R+QT++++Q
Sbjct: 348 VGSRNFFCGSTWVTATGLDRTTAYHISMMASVMNSALLQSSLEKIGVQARLQTAISVQGV 407
Query: 241 AEPYNRQRAIRHLEKXXXXXXXXXXXXXXNPLFSTDIAAALRASELNAQAVLKGTNVDGV 300
EPYNRQRA RHL+K NPL S+D +AALRA ++NA+AV+KGTNVDGV
Sbjct: 408 GEPYNRQRATRHLDKGRVVIFGGIGATLGNPLLSSDASAALRAIDINAEAVVKGTNVDGV 467
Query: 301 YDCNSRDNNFTFEHISFRELASRGVTSMDMSALTFCEENAIP 342
YDC+S+D+N TFEHISF++LASRG+TSMD AL FCEEN+IP
Sbjct: 468 YDCHSQDSNVTFEHISFQDLASRGLTSMDTMALNFCEENSIP 509
>AT3G18680.1 | Symbols: | Amino acid kinase family protein |
chr3:6427533-6429520 FORWARD LENGTH=339
Length = 339
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/246 (50%), Positives = 169/246 (68%), Gaps = 5/246 (2%)
Query: 117 SSGGQVNSMKSKALSNLRWRRVVLKISGAALTGSDTCNLDPKVAMLVSSEVAIASRLGVE 176
SS ++ S + L+WRRV+LK+SG AL G + N+DPKV M ++ EVA +RLG+E
Sbjct: 78 SSFPRLPSFDGTSKPPLKWRRVLLKVSGEALAGDEEQNIDPKVTMAIAREVAAVTRLGIE 137
Query: 177 VVIVVGGRNFFCGDAWVTATGLERCTAYQVGMMATVMNSILLQSTLEKMGVQTRVQTSLA 236
V IVVGG N F G W +GL+R +A +GM+ATVMN+I LQ+T+E +G+ TRVQT+
Sbjct: 138 VAIVVGGGNIFRGSTWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFR 197
Query: 237 MQEFAEPYNRQRAIRHLEKXXXXXXXXXXXXXXNPLFSTDIAAALRASELNAQAVLKGTN 296
M E AEPY R+RAIRHLEK NP F+TD AAALR +E+NA+ VLK TN
Sbjct: 198 MSEVAEPYIRRRAIRHLEK---GRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATN 254
Query: 297 VDGVYDCNSR--DNNFTFEHISFRELASRGVTSMDMSALTFCEENAIPVVVFNLLAPGNI 354
VDGV+D + + N + ++++E+ S+ ++ MDM+A+T C+EN IPVVVFNL PGNI
Sbjct: 255 VDGVFDDDPKRNPNARLLDSLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLSEPGNI 314
Query: 355 SKALCG 360
+KA+ G
Sbjct: 315 AKAIKG 320
>AT3G58630.1 | Symbols: | sequence-specific DNA binding
transcription factors | chr3:21683928-21685771 REVERSE
LENGTH=321
Length = 321
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 64/113 (56%), Gaps = 13/113 (11%)
Query: 1 MCLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVE-----------QCKNKV 49
L++A+ ++ L+RGNLR + W+EVA V++R N ++V QCKN++
Sbjct: 32 FTLIQAWGNRYVDLSRGNLRQKHWQEVANAVNDRHYNTGRNVSAAKSQPYRTDVQCKNRI 91
Query: 50 DNLKKRYKLERHRM--NNGCISSSHWPWFKQMEHIVGNSLPTKFSDEDKALVP 100
D LKK+YK+E+ R+ +N S WP+F ++ ++ S PT + + +P
Sbjct: 92 DTLKKKYKVEKARVSESNPGAYISPWPFFSALDDLLRESFPTSSNPDSTDNIP 144
>AT3G14180.1 | Symbols: | sequence-specific DNA binding
transcription factors | chr3:4707290-4708621 REVERSE
LENGTH=443
Length = 443
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 64/95 (67%), Gaps = 5/95 (5%)
Query: 2 CLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCE--NQSKSVEQCKNKVDNLKKRYKLE 59
L++A+ E++ +L+RGNL+ + W+EVA +VS R + K+ QCKN++D +KK+YK E
Sbjct: 91 VLIDAWGERYLELSRGNLKQKHWKEVAEIVSSREDYGKIPKTDIQCKNRIDTVKKKYKQE 150
Query: 60 RHRMNNGCISSSHWPWFKQMEHIVGNS--LPTKFS 92
+ R+ NG S W +F +++ ++G++ +PT S
Sbjct: 151 KVRIANGG-GRSRWVFFDKLDRLIGSTAKIPTATS 184
>AT3G54390.1 | Symbols: | sequence-specific DNA binding
transcription factors | chr3:20137912-20138863 REVERSE
LENGTH=296
Length = 296
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 2 CLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCEN--QSKSVEQCKNKVDNLKKRYKLE 59
LLEAY K+ NR L+G+DWE+VA VS R + K+ QCKNK++++KKRY+ E
Sbjct: 45 TLLEAYESKWVLRNRAKLKGQDWEDVAKHVSSRATHTKSPKTQTQCKNKIESMKKRYRSE 104
Query: 60 RHRMNNGCISSSHWPWFKQMEHIVGNSLP 88
+ S WP + +++H++ + P
Sbjct: 105 -----SATADGSSWPLYPRLDHLLRGTQP 128
>AT2G44730.1 | Symbols: | Alcohol dehydrogenase transcription
factor Myb/SANT-like family protein |
chr2:18437447-18438565 REVERSE LENGTH=372
Length = 372
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 1 MCLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCEN--QSKSVEQCKNKVDNLKKRYKL 58
+ L++AY +K+ LNRGNL+ WEEVA V C + K+ QC++K++ L+KRY+
Sbjct: 70 IALIDAYRDKWYALNRGNLKANHWEEVAEAVGANCPDVILKKTAVQCRHKMEKLRKRYRT 129
Query: 59 ERHRMNNGCISS--SHWPWFKQME 80
E R + ++ S W FK+ME
Sbjct: 130 EIQRARSVPVARFISSWVHFKRME 153
>AT3G24860.1 | Symbols: | Homeodomain-like superfamily protein |
chr3:9073642-9074574 FORWARD LENGTH=310
Length = 310
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 10/111 (9%)
Query: 1 MCLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVEQCKNKVDNLKKRYKLER 60
+ L+E+Y EK+ + RG L+ WEE+A S R + S QC++K++ ++KR++ ER
Sbjct: 71 LLLIESYKEKWFAIGRGPLKSTHWEEIAVAASSRSGVERTST-QCRHKIEKMRKRFRSER 129
Query: 61 HRMNNGCISSSHWPWFKQMEHIVGNSLPTKFSDEDKALVPASNSPRQSKRY 111
M G IS WP++ QME + +S P S +P P + RY
Sbjct: 130 QSM--GPISI--WPFYNQMEEL-DSSNPAPISARPLTRLP----PNSNNRY 171
>AT3G24490.1 | Symbols: | Alcohol dehydrogenase transcription
factor Myb/SANT-like family protein |
chr3:8911022-8912023 FORWARD LENGTH=333
Length = 333
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 1 MCLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQSKSVEQCKNKVDNLKKRYKLER 60
LLE + ++F QL R +LR DW EVA VSE KS QC+ +D+LK++Y+ E+
Sbjct: 96 FVLLEVWGDRFLQLGRRSLRNEDWNEVAEKVSEEL-RMEKSETQCRRMIDDLKRKYRKEK 154
Query: 61 HRMNNGCISSSHWPWFKQMEHIV 83
++ + SS W +F +++ ++
Sbjct: 155 IKVEKSGLGSSKWSFFNKLDMLL 177
>AT3G11100.1 | Symbols: | sequence-specific DNA binding
transcription factors | chr3:3476490-3477320 REVERSE
LENGTH=249
Length = 249
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 2 CLLEAYTEKFTQLNRGNLRGRDWEEVA-AVVSERCENQSKSVEQCKNKVDNLKKRYKLER 60
L+EA+ +++ LNRGNLR DW+EVA AV S + K+ QCKN++D LKK+Y
Sbjct: 29 TLIEAWGDRYVNLNRGNLRQNDWKEVADAVNSSHGNGRPKTDVQCKNRIDTLKKKY---- 84
Query: 61 HRMNNGCISSSHWPWFKQMEHIVG 84
S+W +F +++ ++G
Sbjct: 85 --KTEKAKPLSNWCFFDRLDFLIG 106
>AT1G54060.1 | Symbols: ASIL1 | 6B-interacting protein 1-like 1 |
chr1:20180972-20182123 FORWARD LENGTH=383
Length = 383
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 58/87 (66%), Gaps = 4/87 (4%)
Query: 2 CLLEAYTEKFTQLNRGNLRGRDWEEVAAVV--SERCENQSKSVEQCKNKVDNLKKRYKLE 59
L+EA+ ++F++ +G L+ + W+EVA +V S +C+ + QCKN++D +KK+YK E
Sbjct: 101 VLIEAWGDRFSEPGKGTLKQQHWKEVAEIVNKSRQCKYPKTDI-QCKNRIDTVKKKYKQE 159
Query: 60 RHRMNNGCISSSHWPWFKQMEHIVGNS 86
+ ++ +G S W +FK++E ++G +
Sbjct: 160 KAKIASGD-GPSKWVFFKKLESLIGGT 185
>AT5G05550.1 | Symbols: | sequence-specific DNA binding
transcription factors | chr5:1639344-1640550 REVERSE
LENGTH=246
Length = 246
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 2 CLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQS--KSVEQCKNKVDNLKKRYKLE 59
L+EA+ ++ +LN GNLR DW++VA V+ R + S K+ QCKN+VD LKK+YK
Sbjct: 31 TLVEAWGNRYVKLNHGNLRQNDWKDVADAVNSRHGDNSRKKTDLQCKNRVDTLKKKYK-- 88
Query: 60 RHRMNNGCISSSHWPWFKQMEHIVG 84
+S S W ++ +++ ++G
Sbjct: 89 ---TEKAKLSPSTWRFYNRLDVLIG 110
>AT5G05550.2 | Symbols: | sequence-specific DNA binding
transcription factors | chr5:1639529-1640550 REVERSE
LENGTH=249
Length = 249
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 2 CLLEAYTEKFTQLNRGNLRGRDWEEVAAVVSERCENQS--KSVEQCKNKVDNLKKRYKLE 59
L+EA+ ++ +LN GNLR DW++VA V+ R + S K+ QCKN+VD LKK+YK
Sbjct: 31 TLVEAWGNRYVKLNHGNLRQNDWKDVADAVNSRHGDNSRKKTDLQCKNRVDTLKKKYK-- 88
Query: 60 RHRMNNGCISSSHWPWFKQMEHIVG 84
+S S W ++ +++ ++G
Sbjct: 89 ---TEKAKLSPSTWRFYNRLDVLIG 110