Miyakogusa Predicted Gene

Lj5g3v0704350.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0704350.1 Non Chatacterized Hit- tr|I1MDA7|I1MDA7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.29320
PE,50,2e-18,Myb_DNA-bind_4,NULL; coiled-coil,NULL; FAMILY NOT
NAMED,NULL; seg,NULL,NODE_9669_length_2015_cov_75.062531.path1.1
         (468 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G10040.1 | Symbols:  | sequence-specific DNA binding transcri...   229   2e-60
AT1G76870.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...   164   1e-40
AT1G21200.1 | Symbols:  | sequence-specific DNA binding transcri...   164   1e-40

>AT3G10040.1 | Symbols:  | sequence-specific DNA binding
           transcription factors | chr3:3096580-3097875 REVERSE
           LENGTH=431
          Length = 431

 Score =  229 bits (585), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/247 (53%), Positives = 150/247 (60%), Gaps = 32/247 (12%)

Query: 55  QQLQQPIKHGYSPYSSAKNKQQQSSIS----DDDELGF-------PADETSGDPKRKISP 103
           QQ Q PIK  Y PY+S    +Q S IS    DD++ G        P D    D KRK+S 
Sbjct: 44  QQTQPPIKSLY-PYAS--KPKQMSPISGGGCDDEDRGSGSGSGCNPEDSAGTDGKRKLSQ 100

Query: 104 WQRMKWTDTMVRLLIMAVYYIGDEAGSEGTDP----------NGXXXXXXXXXXXXXXXX 153
           W RMKWTDTMVRLLIMAV+YIGDEAG    DP           G                
Sbjct: 101 WHRMKWTDTMVRLLIMAVFYIGDEAGL--NDPVDAKKKTGGGGGGGGGGGMLQKKGKWKS 158

Query: 154 VSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQSLLDTMD-LSPKM 212
           VSRAM+EKGF VSPQQCEDKFNDLNKRYKRVNDILGKG ACRVVENQ LL++MD L+PK+
Sbjct: 159 VSRAMVEKGFSVSPQQCEDKFNDLNKRYKRVNDILGKGIACRVVENQGLLESMDHLTPKL 218

Query: 213 KEEVRKLLNSKHLFFREMCAYHNSCGHGASPGETPXXXXXXXXXXXXXXXXXXXXSCFHS 272
           K+EV+KLLNSKHLFFREMCAYHNSCGH     + P                    +CFH+
Sbjct: 219 KDEVKKLLNSKHLFFREMCAYHNSCGHLGGHDQQP-----PQQNPISIPIPSQQQNCFHA 273

Query: 273 SETASLG 279
           +E   + 
Sbjct: 274 AEAGKMA 280



 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 67/99 (67%)

Query: 357 SQLVQQLNTEVSGVLQDGGKSPWEKRQWMRSRIMQLEEQQLSYQTQAFDLEKQRVKWARF 416
           S  V++L  E + V++D GKS WEK++W+R +++++EE+++ Y+ +  ++EKQRVKW R+
Sbjct: 319 STAVKRLREEAASVVEDVGKSVWEKKEWIRRKMLEIEEKKIGYEWEGVEMEKQRVKWMRY 378

Query: 417 SSKKEREMERAXXXXXXXXXXXXXMVLIIHQKELELMNL 455
            SKKEREME+A             M+L++ + E+EL  L
Sbjct: 379 RSKKEREMEKAKLDNQRRRLETERMILMLRRSEIELNEL 417


>AT1G76870.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: sequence-specific DNA binding transcription factors
           (TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins
           in 76 species: Archae - 0; Bacteria - 2; Metazoa - 137;
           Fungi - 14; Plants - 127; Viruses - 0; Other Eukaryotes
           - 126 (source: NCBI BLink). | chr1:28857250-28858407
           FORWARD LENGTH=385
          Length = 385

 Score =  164 bits (416), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 80/160 (50%), Positives = 112/160 (70%), Gaps = 10/160 (6%)

Query: 77  QSSISDDDELGFPADETSGDPKRKISPWQRMKWTDTMVRLLIMAVYYIGDEAGSEGTDPN 136
           + S+S+DDEL   + +     K   SPWQR+KW D MV+L+I A+ YIG+++GS+     
Sbjct: 57  KKSMSEDDELCLLSSDGQNKSKEN-SPWQRVKWMDKMVKLMITALSYIGEDSGSD----- 110

Query: 137 GXXXXXXXXXXXXXXXXVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRV 196
                            VS+ M E+G++VSPQQCEDKFNDLNKRYK++N++LG+GT+C V
Sbjct: 111 ---KKFAVLQKKGKWRSVSKVMDERGYHVSPQQCEDKFNDLNKRYKKLNEMLGRGTSCEV 167

Query: 197 VENQSLLDTMD-LSPKMKEEVRKLLNSKHLFFREMCAYHN 235
           VEN SLLD +D L+ K K+EVR++++SKHLF+ EMC+YHN
Sbjct: 168 VENPSLLDKIDYLNEKEKDEVRRIMSSKHLFYEEMCSYHN 207


>AT1G21200.1 | Symbols:  | sequence-specific DNA binding
           transcription factors | chr1:7421483-7422814 FORWARD
           LENGTH=443
          Length = 443

 Score =  164 bits (415), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/170 (49%), Positives = 119/170 (70%), Gaps = 10/170 (5%)

Query: 72  KNKQQQSSISDDDELGFPADETSG-----DPKRKISPWQRMKWTDTMVRLLIMAVYYIGD 126
           K +++++S+SDDDE  F  +   G     +   K SPWQR+KWTD MV+LLI AV YIGD
Sbjct: 77  KAEREKNSVSDDDEPSFTEEGGDGVHNEANRSTKGSPWQRVKWTDKMVKLLITAVSYIGD 136

Query: 127 EAGSEGTDPNGXXXXXXXXXXXXXXXXVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVND 186
           ++  + +                    VS+ M E+G++VSPQQCEDKFNDLNKRYK++ND
Sbjct: 137 DSSIDSS----SRRKFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLND 192

Query: 187 ILGKGTACRVVENQSLLDTMD-LSPKMKEEVRKLLNSKHLFFREMCAYHN 235
           +LG+GT+C+VVEN +LLD++  L+ K K++VRK+++SKHLF+ EMC+YHN
Sbjct: 193 MLGRGTSCQVVENPALLDSIGYLNDKEKDDVRKIMSSKHLFYEEMCSYHN 242



 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%)

Query: 373 DGGKSPWEKRQWMRSRIMQLEEQQLSYQTQAFDLEKQRVKWARFSSKKEREMERAXXXXX 432
           + G++   ++QWM SR +QLEEQ+L  Q +  +LEKQR +W RFS K+++E+ER      
Sbjct: 362 ESGRAGSVQKQWMESRTLQLEEQKLQIQVELLELEKQRFRWQRFSKKRDQELERMRMENE 421

Query: 433 XXXXXXXXMVLIIHQKEL 450
                   M L + Q+EL
Sbjct: 422 RMKLENDRMGLELKQREL 439