Miyakogusa Predicted Gene

Lj5g3v0681160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0681160.1 tr|G7IA77|G7IA77_MEDTR RRP1 OS=Medicago
truncatula GN=MTR_1g062200 PE=4 SV=1,61.36,0,seg,NULL;
coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
NT-C2,EEIG1/EHBP1 N-ter,CUFF.53775.1
         (1236 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G22060.1 | Symbols:  | LOCATED IN: vacuole; EXPRESSED IN: 23 ...   127   7e-29
AT5G52280.1 | Symbols:  | Myosin heavy chain-related protein | c...    79   2e-14
AT1G63300.1 | Symbols:  | Myosin heavy chain-related protein | c...    78   4e-14
AT5G41140.1 | Symbols:  | Myosin heavy chain-related protein | c...    77   8e-14
AT5G41140.2 | Symbols:  | Myosin heavy chain-related protein | c...    77   8e-14

>AT1G22060.1 | Symbols:  | LOCATED IN: vacuole; EXPRESSED IN: 23
           plant structures; EXPRESSED DURING: 13 growth stages;
           BEST Arabidopsis thaliana protein match is: FBD, F-box
           and Leucine Rich Repeat domains containing protein
           (TAIR:AT1G22000.1); Has 84739 Blast hits to 38714
           proteins in 2257 species: Archae - 1436; Bacteria -
           11314; Metazoa - 40747; Fungi - 7706; Plants - 4675;
           Viruses - 308; Other Eukaryotes - 18553 (source: NCBI
           BLink). | chr1:7773373-7780586 REVERSE LENGTH=1999
          Length = 1999

 Score =  127 bits (318), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 92/154 (59%), Gaps = 2/154 (1%)

Query: 1   MFRLHKHRSAKSGDRIEFRISHLKALQVPK-GWDKLFVSVVSIENGKTVAKSGKVPVRNG 59
           M RL K +  K+  ++ FR+    A  VP+ GWDKLF+S +  ++ K  AK+ K  VRNG
Sbjct: 1   MSRLAKWKLEKAKVKVVFRL-QFHATHVPQAGWDKLFISFIPADSVKATAKTTKALVRNG 59

Query: 60  SCQWSDTFSESIWFSRDDSSKEADDCLLKLIVAMGSLRSGILGEATVKMNSYVSSDTAIP 119
           +C+W D   E+    +D  +K+ D+ L K++VAMG+ RS ILGEA + +  Y  +     
Sbjct: 60  TCKWGDPIYETTRLLQDTRTKQFDEKLYKIVVAMGTSRSSILGEAMINLAEYADALKPFA 119

Query: 120 LSIPLKKCNHGTVLHVTVQCLTPRKKLRDQESSK 153
           + +PL+ C+ G +LHVT+Q LT +   R+ E  +
Sbjct: 120 VILPLQGCDPGAILHVTIQLLTSKTGFREFEQQR 153


>AT5G52280.1 | Symbols:  | Myosin heavy chain-related protein |
           chr5:21226959-21230109 FORWARD LENGTH=853
          Length = 853

 Score = 79.0 bits (193), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 195/457 (42%), Gaps = 67/457 (14%)

Query: 1   MFRLHKHRSAKSGDRIEFRISHLKALQVPK-GWDKLFVSVVSIENGKTVAKSGKVPVRNG 59
           MF+    R+ K+  +  F++   +A QVPK     L +S+V  + GK   K  K  V+ G
Sbjct: 1   MFK--SWRNDKNKIKAVFKL-QFQATQVPKLKKTALMISLVPDDVGKPTFKLEKSEVKEG 57

Query: 60  SCQWSDTFSESIWFSRDDSSKEADDCLLKLIVAMGSLRSGILGEATVKMNSYVSSDTAIP 119
            C W +    S+   ++  +    + +   +VA GS +SG LGEA++    +++    + 
Sbjct: 58  ICSWENPIYVSVKLIKEPKTGIVREKIYHFVVATGSSKSGFLGEASIDFADFLTEADPLT 117

Query: 120 LSIPLKKCNHGTVLHVTVQCLTPRKKL------RDQESSKTNSHLQTMNENNHXXXXXXX 173
           +S+PLK  N G VL+VT+  +     L      +DQ  SK +S  +++  N+        
Sbjct: 118 VSLPLKFANSGAVLNVTIHKIQGASDLKFIEENKDQTLSKEDS-FKSLQSNDDLEGYNQD 176

Query: 174 XXXXXXXXXXXXXXXXXXXXTLSTGGVETRTTSFSGSVSNYSFNSI--EGFTERGNISPC 231
                                     ++  T   +G     SF+SI   G+ + GN    
Sbjct: 177 ER-----------------------SLDVNTAKNAGLGG--SFDSIGESGWIDDGNARLP 211

Query: 232 ISDEQSPTGRQDSASSQRSVSHHDYTAXXXXXXXXXXXXXXXMQDI--GASSPKMSSASN 289
                 P  R     +    S+ D++A                     G SS   SS   
Sbjct: 212 QRHNSVPATR-----NGHRRSNTDWSASSTSDESYIESRNSPENSFQRGFSSVTESSDPI 266

Query: 290 NRLEAAEDKTEELRAEAKMWEMNARKLMGDLDMLRTEFSDQSKKLEGLEMNLSEAYVERD 349
            RL+    + E LR ++++ E+  + L       R +   +SK+++ L   +S    ERD
Sbjct: 267 ERLKM---ELEALRRQSELSELEKQSL-------RKQAIKESKRIQELSKEVSCLKGERD 316

Query: 350 SFKRVVEELKLSSEDPTVRQKASEDSISQSECIPD-----IEKSLKDELKFQKESNANLS 404
                 E+L+L +     R +A  D+ S+  CI +     IE+ ++DEL  +K+  +NL 
Sbjct: 317 GAMEECEKLRLQN----SRDEA--DAESRLRCISEDSSNMIEE-IRDELSCEKDLTSNLK 369

Query: 405 LQLKKSQEANXXXXXXXXXXXXTIEQQKYEIENLSSL 441
           LQL+++QE+N             +EQ+  EI +L+SL
Sbjct: 370 LQLQRTQESNSNLILAVRDLNEMLEQKNNEISSLNSL 406


>AT1G63300.1 | Symbols:  | Myosin heavy chain-related protein |
           chr1:23482193-23486067 FORWARD LENGTH=1029
          Length = 1029

 Score = 78.2 bits (191), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 76/140 (54%), Gaps = 3/140 (2%)

Query: 1   MFRLHKHRSAKSGDRIEFRISHLKALQVPK-GWDKLFVSVVSIENGKTVAKSGKVPVRNG 59
           MF+  + RS K+  ++ FR+    A Q  +   + L +S+V  + GK  A+S K  V +G
Sbjct: 1   MFKSARWRSEKNRIKVVFRLK-FHATQASQFNTEGLILSLVPGDIGKPTARSEKAIVNDG 59

Query: 60  SCQWSDTFSESIWFSRDDSSKEADDCLLKLIVAM-GSLRSGILGEATVKMNSYVSSDTAI 118
            C+W     E++ F +D  + + +  +  LIV+  GS R G++GE ++    YV +    
Sbjct: 60  HCRWEIPVYETVKFLKDVKTGKVNQRIYHLIVSTTGSARGGLVGETSIDFADYVDATKTC 119

Query: 119 PLSIPLKKCNHGTVLHVTVQ 138
            +S+PL+  +   +LHV++Q
Sbjct: 120 NVSLPLQNSSSKALLHVSIQ 139


>AT5G41140.1 | Symbols:  | Myosin heavy chain-related protein |
           chr5:16468726-16472546 FORWARD LENGTH=983
          Length = 983

 Score = 77.0 bits (188), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 4/141 (2%)

Query: 1   MFRLHKHRSAKSGD-RIEFRISHLKALQVPK-GWDKLFVSVVSIENGKTVAKSGKVPVRN 58
           MF+  + RS KS   +I F++    A QV +   + L +SVV  + GK+  K+ K  V +
Sbjct: 1   MFKSSRWRSEKSNKIKIVFKL-QFHATQVTQLKAEGLTISVVPGDVGKSTGKAEKAMVLD 59

Query: 59  GSCQWSDTFSESIWFSRDDSSKEADDCLLKLIVAM-GSLRSGILGEATVKMNSYVSSDTA 117
           G C+W     E++ F +D  + + +  +  L+++  GS +SG++GE ++    YV +   
Sbjct: 60  GHCRWESPVYETVKFLQDVKTGKVNQRIYHLVMSTTGSTKSGVVGETSIDFADYVDAIKT 119

Query: 118 IPLSIPLKKCNHGTVLHVTVQ 138
             +S+PL+  N   +LHV +Q
Sbjct: 120 CNVSLPLQNSNSKAMLHVAIQ 140


>AT5G41140.2 | Symbols:  | Myosin heavy chain-related protein |
           chr5:16468726-16472546 FORWARD LENGTH=976
          Length = 976

 Score = 77.0 bits (188), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 4/141 (2%)

Query: 1   MFRLHKHRSAKSGD-RIEFRISHLKALQVPK-GWDKLFVSVVSIENGKTVAKSGKVPVRN 58
           MF+  + RS KS   +I F++    A QV +   + L +SVV  + GK+  K+ K  V +
Sbjct: 1   MFKSSRWRSEKSNKIKIVFKL-QFHATQVTQLKAEGLTISVVPGDVGKSTGKAEKAMVLD 59

Query: 59  GSCQWSDTFSESIWFSRDDSSKEADDCLLKLIVAM-GSLRSGILGEATVKMNSYVSSDTA 117
           G C+W     E++ F +D  + + +  +  L+++  GS +SG++GE ++    YV +   
Sbjct: 60  GHCRWESPVYETVKFLQDVKTGKVNQRIYHLVMSTTGSTKSGVVGETSIDFADYVDAIKT 119

Query: 118 IPLSIPLKKCNHGTVLHVTVQ 138
             +S+PL+  N   +LHV +Q
Sbjct: 120 CNVSLPLQNSNSKAMLHVAIQ 140