Miyakogusa Predicted Gene

Lj5g3v0656970.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0656970.1 Non Chatacterized Hit- tr|I1JPP8|I1JPP8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.12154
PE,90.91,0,tRNA-synt_His,NULL; HGTP_anticodon,Anticodon-binding; no
description,NULL; no description,Anticodon-,gene.g59558.t1.1
         (313 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G46100.1 | Symbols: ATHRS1, HRS1 | Histidyl-tRNA synthetase 1...   382   e-106
AT5G03406.1 | Symbols:  | Class II aaRS and biotin synthetases s...    86   4e-17
AT3G02760.1 | Symbols:  | Class II aaRS and biotin synthetases s...    70   1e-12

>AT3G46100.1 | Symbols: ATHRS1, HRS1 | Histidyl-tRNA synthetase 1 |
           chr3:16928444-16930984 REVERSE LENGTH=486
          Length = 486

 Score =  382 bits (982), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/286 (67%), Positives = 225/286 (78%)

Query: 28  AEAELISSIVTLFKRIGITESDVGFKVSSRKVLQEVLRCYSIPENLFGKVCXXXXXXXXX 87
           AEAELISSIVT FKRIGIT SDVGFKVSSRKVLQE+L+ Y +PE+LFG+VC         
Sbjct: 201 AEAELISSIVTFFKRIGITASDVGFKVSSRKVLQELLKKYGVPEDLFGRVCIIIDKIEKI 260

Query: 88  XXXXXXXXLKAAGLSQEAVLELLQVLSVKSLTELEERLGNSGEAIADLKELFSLAEKFGY 147
                   L   G+S++A+ +LLQVLSVKSL +LE+ +G +GEAIADLK+LFSLAEKFGY
Sbjct: 261 PIDEIKKELGFTGISEDAIEQLLQVLSVKSLDDLEDIIGGAGEAIADLKQLFSLAEKFGY 320

Query: 148 SKWLQFDASVVRGLAYYTGIVFEGFDRQGKLRAICGGGRYDHLFSTFGADDVAACGFGFG 207
           S+W+QFDASVVRGLAYYTGIVFEGFDR+GKLRAICGGGRYD L ST+G DD  ACGFGFG
Sbjct: 321 SEWIQFDASVVRGLAYYTGIVFEGFDRKGKLRAICGGGRYDRLLSTYGGDDFPACGFGFG 380

Query: 208 DAXXXXXXXXXXXXXXXSMQIDDIVCALDEDLQGYAALVANILREKGQSVDLVLESKPLK 267
           DA                 ++++IVCALD+DLQG AA VA  LR+KGQ+VDLVLESKPLK
Sbjct: 381 DAVIVELLKEKDLLPELGQEVENIVCALDKDLQGAAATVATALRDKGQTVDLVLESKPLK 440

Query: 268 WVFKRAARTNAERLVLVGNSEWQKGVVGVKILSTGEQYEVKLDDLK 313
           WVFKRAAR NA RLVLVG +EW+ G V VK+LS+GEQ++VKL DL+
Sbjct: 441 WVFKRAARVNARRLVLVGKTEWEDGSVSVKVLSSGEQFQVKLSDLE 486


>AT5G03406.1 | Symbols:  | Class II aaRS and biotin synthetases
           superfamily protein | chr5:839966-841444 FORWARD
           LENGTH=263
          Length = 263

 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 41/51 (80%), Positives = 46/51 (90%)

Query: 28  AEAELISSIVTLFKRIGITESDVGFKVSSRKVLQEVLRCYSIPENLFGKVC 78
           AEAELISSI+T FKRIGIT SDVGFKVSSRKVLQE L+ Y +PE+LFG+VC
Sbjct: 201 AEAELISSIMTFFKRIGITASDVGFKVSSRKVLQEFLKKYGVPEDLFGRVC 251


>AT3G02760.1 | Symbols:  | Class II aaRS and biotin synthetases
           superfamily protein | chr3:597588-600650 REVERSE
           LENGTH=883
          Length = 883

 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 131/318 (41%), Gaps = 26/318 (8%)

Query: 5   GKLKYFLRIDVAYSKQGILISKEAEAELISSIVTLFKRIGITESDVGFKVSSRKVLQEVL 64
           G+ + F + D  +   G+      + E++  +  L   + I + +V  K++ RK+L  +L
Sbjct: 554 GRYREFYQCD--FDIAGLFEPMGPDFEIVKILTELLDELEIGDYEV--KLNHRKLLDGML 609

Query: 65  RCYSIPENLFGKVCXXXXXXXXXXXXXXXXXL-KAAGLSQE-------------AVLELL 110
               +P   F  +C                 + +  GLS E             A LELL
Sbjct: 610 EICGVPPEKFRTICSSIDKLDKQSFEQVKKEMVEEKGLSSEIADRIGNFVKEKGAPLELL 669

Query: 111 QVLSVKSLTELEERLGNSGEAIADLKELFSLAEKFGYSKWLQFDASVVRGLAYYTGIVFE 170
             L  +    L+ +  +S EA+ +L  +F   ++   S+ + FD S+ RGL YYTG++FE
Sbjct: 670 SKLRQEGSEFLDNQ--SSREALDELSIMFEALKRSKCSERIVFDLSLARGLDYYTGVIFE 727

Query: 171 GFDRQGKLRAICGGGRYDHLFSTFGADDVAACGFGFGDAXXXXXXXXXXXXXXXSMQIDD 230
                 ++ +I  GGRYD+L   FG   V A G   G                  ++  +
Sbjct: 728 AVCIGAEVGSIGAGGRYDNLIGMFGTKQVPAVGMSLGIERVFNIMEELNEKQKQVIRPTE 787

Query: 231 ----IVCALDEDLQGYAALVANILREKGQSVDLVLESKPLKWVFKRAARTNAERLVLVGN 286
               +   +D  L   A LV+ +   K  +  LV  SK  +  F RA  +    +V+VG 
Sbjct: 788 TQVLVSIMVDNKLAEAAELVSQLWGAKINAEYLV--SKRKEKHFNRAKESGIPWMVMVGE 845

Query: 287 SEWQKGVVGVKILSTGEQ 304
            E     V +K L  G +
Sbjct: 846 KELSGSFVTLKKLEKGSE 863