Miyakogusa Predicted Gene
- Lj5g3v0641470.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0641470.2 Non Chatacterized Hit- tr|I1L8X8|I1L8X8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51038 PE,79.58,0,NUCLEAR
PORE COMPLEX PROTEIN NUP160,NULL; Nup160,Nucleoporin Nup120/160;
seg,NULL,CUFF.53610.2
(1460 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G33410.2 | Symbols: SAR1 | SUPPRESSOR OF AUXIN RESISTANCE1 | ... 1263 0.0
AT1G33410.1 | Symbols: SAR1, NUP160, ATNUP160 | SUPPRESSOR OF AU... 1249 0.0
>AT1G33410.2 | Symbols: SAR1 | SUPPRESSOR OF AUXIN RESISTANCE1 |
chr1:12109769-12118828 REVERSE LENGTH=1504
Length = 1504
Score = 1263 bits (3269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 682/1472 (46%), Positives = 935/1472 (63%), Gaps = 42/1472 (2%)
Query: 11 EVPIIGS-DAVRWIDLSVPSSANIAVGSGATP------LAPPTTDNRASCSAIGDPPTYL 63
EVP+ G + V+WI++SVPS + + GA + P +++ AS S IG+P
Sbjct: 13 EVPVAGGGNVVKWIEISVPSPSVSSSSIGANSSEDNECVQLPLSEDYASSSVIGEPSISF 72
Query: 64 IWRIHKDHSQSLELLEVSASKEFPRFGLRFTFPDALCPFAFICKNENSGSSRFPYLLYVL 123
+WRI+K +LELL++SA FP GLRF F L PFAF+ +E S R Y LY L
Sbjct: 73 VWRINKTSPNALELLQLSAKSGFPITGLRFVFAQTLSPFAFVYADEGGDSGRLVYFLYSL 132
Query: 124 TVSGLAYLLRIRNVSAYASCSIIPVDELFEFDVRGYVSNNXXXXXXXXXXXXXXXXXSDG 183
T SG+ Y+L++ N AY S S+ P+D L DVR Y+ N SDG
Sbjct: 133 TPSGVVYVLKLSNTLAYKSGSVFPLDHLIHLDVRPYL-NESRVTSVAASPGFIFLGRSDG 191
Query: 184 SVCCFQLGVLDPSAPGFLHELRDEAGISRLWGLI---SGGKMVASAQDLVICELHEKKFL 240
V CFQ V + GF ELRD+ G RLWG + G +VA+ QDL I E+H + +L
Sbjct: 192 CVSCFQPIVYFQKSSGFHQELRDDTGFGRLWGFVRLQCRGTVVAAVQDLFISEVHGRNYL 251
Query: 241 FVLHLDGTLRIWDLASHARVFTHNMGVMTMAGANFQRLWVGQSYPELSRIPLAILYGHSP 300
VLH DG LR+WD+ +++RV ++ + G RLW+G++ + IPLA+LY S
Sbjct: 252 CVLHADGALRVWDILTYSRVLCQSIAAKNLEGVMCVRLWLGKADYDSGIIPLAVLYRKSM 311
Query: 301 DENLGMISLHGILYNVGDRIIFSMEPSVQNLSLEEGRCLDVKLMSNKIWILKDDELVSHL 360
++++ +I+++G+ ++ + I S++ +QN+ LEEG DV+ S+KIW LK +EL S++
Sbjct: 312 NDSMDVITVYGLHFSSAEGIALSLDSGLQNIPLEEGELRDVRFTSDKIWTLKANELTSYM 371
Query: 361 LSTDIYEAEAFSLALQEEFVAEQLFQNSEHLVDEILRITHSIFSSSKEDILSFVSSIFLR 420
L EA S LQE++++EQLF +S ++L THS+FSS+K+ I+ F+SSIFLR
Sbjct: 372 LCQKSSTMEAQSYTLQEDYISEQLFLSSRSSSHDLLLTTHSLFSSAKDQIMGFISSIFLR 431
Query: 421 RLLLPGVHLNAALYATLVEYNRHLAESELQTLTADGLKKEILSLIEHEVASE-KVSILHC 479
RLL PG+ N AL TL+++N++ +SE Q+L+ D L EIL L+EHEV +E +S+ H
Sbjct: 432 RLLCPGIFHNVALRLTLLDHNKNWTDSEFQSLSLDELTSEILLLVEHEVTAETSISVFHW 491
Query: 480 WKCFFTRYFHNWCKNNALYGLLFDSSSGAVGLIRKNSVSLFRSLEDIERIVEGSSDEVNE 539
WK F T Y H+WC NN LL S +GL+R NSVSLF LE+ E + GSS E +
Sbjct: 492 WKNFCTSYLHHWCSNNEPRTLLVQSD--VIGLVRNNSVSLFFRLENAEHSLGGSSSEHSN 549
Query: 540 LTGLAXXXXXXXXXXXXXXXXRCVIGFSQQLGKTASSIFYESLLTASVISSEDIVHCIMK 599
LT L RC S+Q G +++YES+ +ISS++IV ++
Sbjct: 550 LTSL-DLGVSHSDHEILAEVLRCTSKISKQWGGAPYAMYYESITGRPIISSDEIVPRLVN 608
Query: 600 ILETGYCIS-GPVLQTSTSGDNIIVLEKELADHKSLRKLSVDMFLSLQGLFRKASEWGKV 658
ILE+GY + G + D EKEL HK+LR S+DM LSL L ++A W KV
Sbjct: 609 ILESGYSTTIGQRTWSDLGADR--AWEKELEAHKNLRTFSIDMLLSLSALCQRAGSWEKV 666
Query: 659 LNVIEGFLKFLVPQKIMHKFDTEXXXXXXXXXXVHTAYQIAKVMFETAWDFLLFLSYLVE 718
++E +L++LVP+K M K D E V Q KVMFE+A+D L +SYL+
Sbjct: 667 FTIMEHYLQYLVPKKSMQKNDGEALSDICSSILVQATSQFVKVMFESAFDIFLLISYLLN 726
Query: 719 ISGQIHLSPDDITKIQLELVPMLQETIFEWLVIIFFAITPATPAVTEDFNSKLSSLQIDN 778
I+GQ+++S DI K++LEL+PM+Q+ + EWL+I+FF TPA EDF+ KLSSLQID+
Sbjct: 727 IAGQVNMSQQDICKLRLELLPMIQDIVSEWLIILFFVTTPAESTSMEDFSLKLSSLQIDS 786
Query: 779 NLGKQLWNEKLGRCDFTLAFMFLLNVKSASVVHSYLWTERFSDMQSYINRMRDFISLIIW 838
++ K+ WN LG+C F+LAF+ L + +S +V Q + +++FIS I +
Sbjct: 787 SIDKRSWNAMLGKCGFSLAFILLFSDRSC-IVDGRFNLRYLPSSQIITSLVQNFISWIRY 845
Query: 839 GQAGG-SSTFLSRSIDLAFILFKHDQYGAAEQLLMMVEGHLLKEKTSHSIQDTDGGWCIR 897
+ G SS+ L RS +L+ L ++ Q A E++L++VE L EKT QDT G WC+
Sbjct: 846 SKTGDDSSSLLRRSTELSLRLIRNGQSDAVERILVVVEASLRGEKTFGCSQDTSGDWCLL 905
Query: 898 HHLLGCCLLAQVQGGLHATKKDKKVSDAIRCFFRFSSGNGASEALQSLSADIGI------ 951
HL GCCLL QVQ G +++K+ DAIRCFFR SSG G+ +AL SLS + G
Sbjct: 906 QHLRGCCLLDQVQRGASGILRERKIIDAIRCFFRASSGEGSWKALHSLSKEAGFSPATTG 965
Query: 952 PYLGFSGYTSIAIWRLQYYQWAMQLFERYNVSEGASQFALAALEQVDEA---LQTQDEKC 1008
P + G TS A W+L YY+WAMQ+FERYN+SEGA QFA AALEQVD+A ++ +E
Sbjct: 966 PSI-LDGSTSSAAWKLHYYEWAMQIFERYNISEGACQFAYAALEQVDDAYNFIEMTEE-- 1022
Query: 1009 IGSSVNESVTTIKGRLWANVFIFALDLGRFHDAYCAIISNPDEESKYICLRRFIIVLYEQ 1068
++ T +GRLWANVF F LDL +DAYCAIISNPDEE K ICLRRFIIVL+E
Sbjct: 1023 --FDPTKAATYTRGRLWANVFKFTLDLNLLNDAYCAIISNPDEEIKRICLRRFIIVLFEC 1080
Query: 1069 GAIKILCSNKLPLIGLVEKVEQELAWKAERSDISAKPNLYKLLYAFQFHQHNWRRAASYI 1128
G KIL LP IGL EK+ QEL WKA RSDI KPN YKLLYA++ +HNWR AASY+
Sbjct: 1081 GKTKILSDGHLPFIGLTEKITQELFWKAGRSDIMMKPNPYKLLYAYEMRRHNWRMAASYM 1140
Query: 1129 YLYSARLRTEAALKDNQGSSMILQERLNALSAAVNALHLVHPAYAWIDPLAERSSPLSEH 1188
Y +SARLR+E A KD + S++LQERLN LSAA+NAL LVHP YAWIDP+ E ++
Sbjct: 1141 YQFSARLRSEGACKDYKHMSLVLQERLNGLSAAMNALALVHPGYAWIDPVPEETT----R 1196
Query: 1189 NPTKKAKRTPDEHTDNDAEPQSWQSSIDIEKLEDEYALTLAEYMLSLVNVKWAFSGKHGA 1248
P KKA+R +E ++ +P+ +S IDIEKL++E+ T AEYMLSL N W +SG
Sbjct: 1197 YPVKKARRAEEEQLRSNDQPKGEKSCIDIEKLQNEFVFTTAEYMLSLKNFGWTYSGLEKP 1256
Query: 1249 LSELADLLVQNNLYDMAFTILLRFFKGSGLKRELERCLSDMALKCCFDKVESNWVEEHGH 1308
S+L DLLVQ NLYDMAFT++L+F++GS LKRELE+ +MA+KCC K + W +
Sbjct: 1257 PSDLVDLLVQANLYDMAFTVVLKFWRGSALKRELEKIFENMAIKCCPAK-GTLW--SSPN 1313
Query: 1309 LLTSSKLEMVVHGSPVRLPTAPQTDRNSRWATLKLYLEKYKEFHGRLPVIVAETLLRADS 1368
L+ +S E V H SP R P + W L++YL++Y + H RLPV VA TLL+ADS
Sbjct: 1314 LMLTSNDEEVTH-SPDRSPADQGSKLAGDWEILEVYLKRYIDIHARLPVSVASTLLQADS 1372
Query: 1369 KIELPLWLVQLFKESQKDRMWGMTGRESTPASLFQLYVNYGRYAEATYLLLEYIESFAST 1428
IELPLWL+Q+FK+ QK++ GM G+E++PASLFQLYV+YGR EAT LLLEY+ESFAS+
Sbjct: 1373 CIELPLWLIQMFKDGQKEKALGMAGQEASPASLFQLYVDYGRLTEATNLLLEYMESFASS 1432
Query: 1429 RPADIIRRKRPFAAWFPYTTIERLLYQLEELI 1460
+PA++++RK+ WFPYTT+ERL ++LE+ +
Sbjct: 1433 KPAEVLKRKKVSGVWFPYTTVERLWWELEKTM 1464
>AT1G33410.1 | Symbols: SAR1, NUP160, ATNUP160 | SUPPRESSOR OF AUXIN
RESISTANCE1 | chr1:12109769-12118828 REVERSE LENGTH=1504
Length = 1504
Score = 1249 bits (3233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/1478 (46%), Positives = 932/1478 (63%), Gaps = 54/1478 (3%)
Query: 11 EVPIIGS-DAVRWIDLSVPSSANIAVGSGATP------LAPPTTDNRASCSAIGDPPTYL 63
EVP+ G + V+WI++SVPS + + GA + P +++ AS S IG+P
Sbjct: 13 EVPVAGGGNVVKWIEISVPSPSVSSSSIGANSSEDNECVQLPLSEDYASSSVIGEPSISF 72
Query: 64 IWRIHKDHSQSLELLEVSASKEFPRFGLRFTFPDALCPFAFICKNENSGSSRFPYLLYVL 123
+WRI+K +LELL++SA FP GLRF F L PFAF+ +E S R Y LY L
Sbjct: 73 VWRINKTSPNALELLQLSAKSGFPITGLRFVFAQTLSPFAFVYADEGGDSGRLVYFLYSL 132
Query: 124 TVSGLAYLLRIRNVSAYASCSIIPVDELFEFDVRGYVSNNXXXXXXXXXXXXXXXXXSDG 183
T SG+ Y+L++ N AY S S+ P+D L DVR Y+ N SDG
Sbjct: 133 TPSGVVYVLKLSNTLAYKSGSVFPLDHLIHLDVRPYL-NESRVTSVAASPGFIFLGRSDG 191
Query: 184 SVCCFQLGVLDPSAPGFLHELRDEAGISRLWGLISGGKMVASAQDLVICELHEKKFLFVL 243
V CFQ V + GF ELRD+ G RL G +VA+ QDL I E+H + +L VL
Sbjct: 192 CVSCFQPIVYFQKSSGFHQELRDDTGFGRL------GTVVAAVQDLFISEVHGRNYLCVL 245
Query: 244 HLDGTLRIWDLASHARVFTHNMGVMTMAGANFQRLWVGQSYPELSRIPLAILYGHSPDEN 303
H DG LR+WD+ +++RV ++ + G RLW+G++ + IPLA+LY S +++
Sbjct: 246 HADGALRVWDILTYSRVLCQSIAAKNLEGVMCVRLWLGKADYDSGIIPLAVLYRKSMNDS 305
Query: 304 LGMISLHGILYNVGDRIIFSMEPSVQNLSLEEGRCLDVKLMSNKIWILKDDELVSHLLST 363
+ +I+++G+ ++ + I S++ +QN+ LEEG DV+ S+KIW LK +EL S++L
Sbjct: 306 MDVITVYGLHFSSAEGIALSLDSGLQNIPLEEGELRDVRFTSDKIWTLKANELTSYMLCQ 365
Query: 364 DIYEAEAFSLALQEEFVAEQLFQNSEHLVDEILRITHSIFSSSKEDILSFVSSIFLRRLL 423
EA S LQE++++EQLF +S ++L THS+FSS+K+ I+ F+SSIFLRRLL
Sbjct: 366 KSSTMEAQSYTLQEDYISEQLFLSSRSSSHDLLLTTHSLFSSAKDQIMGFISSIFLRRLL 425
Query: 424 LPGVHLNAALYATLVEYNRHLAESELQTLTADGLKKEILSLIEHEVASE-KVSILHCWKC 482
PG+ N AL TL+++N++ +SE Q+L+ D L EIL L+EHEV +E +S+ H WK
Sbjct: 426 CPGIFHNVALRLTLLDHNKNWTDSEFQSLSLDELTSEILLLVEHEVTAETSISVFHWWKN 485
Query: 483 FFTRYFHNWCKNNALYGLLFDSSSGAVGLIRKNSVSLFRSLEDIERIVEGSSDEVNELTG 542
F T Y H+WC NN LL S +GL+R NSVSLF LE+ E + GSS E + LT
Sbjct: 486 FCTSYLHHWCSNNEPRTLLVQSD--VIGLVRNNSVSLFFRLENAEHSLGGSSSEHSNLTS 543
Query: 543 LAXXXXXXXXXXXXXXXXRCVIGFSQQLGKTASSIFYESLLTASVISSEDIVHCIMKILE 602
L RC S+Q G +++YES+ +ISS++IV ++ ILE
Sbjct: 544 L-DLGVSHSDHEILAEVLRCTSKISKQWGGAPYAMYYESITGRPIISSDEIVPRLVNILE 602
Query: 603 TGYCIS-GPVLQTSTSGDNIIVLEKELADHKSLRKLSVDMFLSLQGLFRKASEWGKVLNV 661
+GY + G + D EKEL HK+LR S+DM LSL L ++A W KV +
Sbjct: 603 SGYSTTIGQRTWSDLGADR--AWEKELEAHKNLRTFSIDMLLSLSALCQRAGSWEKVFTI 660
Query: 662 IEGFLKFLVPQKIMHKFDTEXXXXXXXXXXVHTAYQIAKVMFETAWDFLLFLSYLVEISG 721
+E +L++LVP+K M K D E V Q KVMFE+A+D L +SYL+ I+G
Sbjct: 661 MEHYLQYLVPKKSMQKNDGEALSDICSSILVQATSQFVKVMFESAFDIFLLISYLLNIAG 720
Query: 722 QIHLSPDDITKIQLELVPMLQETIFEWLVIIFFAITPATPAVTEDFNSKLSSLQIDNNLG 781
Q+++S DI K++LEL+PM+Q+ + EWL+I+FF TPA EDF+ KLSSLQID+++
Sbjct: 721 QVNMSQQDICKLRLELLPMIQDIVSEWLIILFFVTTPAESTSMEDFSLKLSSLQIDSSID 780
Query: 782 KQLWNEKLGRCDFTLAFMFLLNVKSASVVHSYLWTERFSDMQSYINRMRDFISLIIWGQA 841
K+ WN LG+C F+LAF+ L + +S +V Q + +++FIS I + +
Sbjct: 781 KRSWNAMLGKCGFSLAFILLFSDRSC-IVDGRFNLRYLPSSQIITSLVQNFISWIRYSKT 839
Query: 842 GG-SSTFLSRSIDLAFILFKHDQYGAAEQLLMMVEGHLLKEKTSHSIQDTDGGWCIRHHL 900
G SS+ L RS +L+ L ++ Q A E++L++VE L EKT QDT G WC+ HL
Sbjct: 840 GDDSSSLLRRSTELSLRLIRNGQSDAVERILVVVEASLRGEKTFGCSQDTSGDWCLLQHL 899
Query: 901 LGCCLLAQVQGGLHATKKDKKVSDAIRCFFRFSSGNGASEALQSLSADIGI------PYL 954
GCCLL QVQ G +++K+ DAIRCFFR SSG G+ +AL SLS + G P +
Sbjct: 900 RGCCLLDQVQRGASGILRERKIIDAIRCFFRASSGEGSWKALHSLSKEAGFSPATTGPSI 959
Query: 955 GFSGYTSIAIWRLQYYQWAMQLFERYNVSEGASQFALAALEQVDEA---LQTQDEKCIGS 1011
G TS A W+L YY+WAMQ+FERYN+SEGA QFA AALEQVD+A ++ +E
Sbjct: 960 -LDGSTSSAAWKLHYYEWAMQIFERYNISEGACQFAYAALEQVDDAYNFIEMTEE----F 1014
Query: 1012 SVNESVTTIKGRLWANVFIFALDLGRFHDAYCAIISNPDEESKYICLRRFIIVLYEQGAI 1071
++ T +GRLWANVF F LDL +DAYCAIISNPDEE K ICLRRFIIVL+E G
Sbjct: 1015 DPTKAATYTRGRLWANVFKFTLDLNLLNDAYCAIISNPDEEIKRICLRRFIIVLFECGKT 1074
Query: 1072 KILCSNKLPLIGLVEKVEQELAWKAERSDISAKPNLYKLLYAFQFHQHNWRRAASYIYLY 1131
KIL LP IGL EK+ QEL WKA RSDI KPN YKLLYA++ +HNWR AASY+Y +
Sbjct: 1075 KILSDGHLPFIGLTEKITQELFWKAGRSDIMMKPNPYKLLYAYEMRRHNWRMAASYMYQF 1134
Query: 1132 SARLRTEAALKDNQGSSMILQERLNALSAAVNALHLVHPAYAWIDPLAERSSPLSEHNPT 1191
SARLR+E A KD + S++LQERLN LSAA+NAL LVHP YAWIDP+ E ++ P
Sbjct: 1135 SARLRSEGACKDYKHMSLVLQERLNGLSAAMNALALVHPGYAWIDPVPEETT----RYPV 1190
Query: 1192 KKAKRTPDEHTDNDAEPQSWQSSIDIEKLEDEYALTLAEYMLSLVNVKWAFSGKHGALSE 1251
KKA+R +E ++ +P+ +S IDIEKL++E+ T AEYMLSL N W +SG S+
Sbjct: 1191 KKARRAEEEQLRSNDQPKGEKSCIDIEKLQNEFVFTTAEYMLSLKNFGWTYSGLEKPPSD 1250
Query: 1252 LADLLVQNNLYDMAFTILLRFFKGSGLKRELERCLSDMALKCCFDKVESNWVEEHGHLLT 1311
L DLLVQ NLYDMAFT++L+F++GS LKRELE+ +MA+KCC K + W +L+
Sbjct: 1251 LVDLLVQANLYDMAFTVVLKFWRGSALKRELEKIFENMAIKCCPAK-GTLW--SSPNLML 1307
Query: 1312 SSKLEMVVHGSPVRLPTAPQTDRNSRWATLKLYLEKYKEFHGRLPVIVAETLLRADSKIE 1371
+S E V H SP R P + W L++YL++Y + H RLPV VA TLL+ADS IE
Sbjct: 1308 TSNDEEVTH-SPDRSPADQGSKLAGDWEILEVYLKRYIDIHARLPVSVASTLLQADSCIE 1366
Query: 1372 LPLWLVQLFKESQKDRMWGMTGRESTPASLFQLYVNYGRYAEATYLLLEYIESFAS---- 1427
LPLWL+Q+FK+ QK++ GM G+E++PASLFQLYV+YGR EAT LLLEY+ESFAS
Sbjct: 1367 LPLWLIQMFKDGQKEKALGMAGQEASPASLFQLYVDYGRLTEATNLLLEYMESFASSVSY 1426
Query: 1428 -----TRPADIIRRKRPFAAWFPYTTIERLLYQLEELI 1460
T+PA++++RK+ WFPYTT+ERL ++LE+ +
Sbjct: 1427 DQSVETKPAEVLKRKKVSGVWFPYTTVERLWWELEKTM 1464