Miyakogusa Predicted Gene
- Lj5g3v0641470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0641470.1 Non Chatacterized Hit- tr|I1L8X8|I1L8X8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51038 PE,77.68,0,NUCLEAR
PORE COMPLEX PROTEIN NUP160,NULL; Nup160,Nucleoporin Nup120/160;
seg,NULL,CUFF.53610.1
(1323 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G33410.2 | Symbols: SAR1 | SUPPRESSOR OF AUXIN RESISTANCE1 | ... 1071 0.0
AT1G33410.1 | Symbols: SAR1, NUP160, ATNUP160 | SUPPRESSOR OF AU... 1063 0.0
>AT1G33410.2 | Symbols: SAR1 | SUPPRESSOR OF AUXIN RESISTANCE1 |
chr1:12109769-12118828 REVERSE LENGTH=1504
Length = 1504
Score = 1071 bits (2771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/1314 (44%), Positives = 808/1314 (61%), Gaps = 54/1314 (4%)
Query: 11 EVPIIGS-DAVRWIDLSVPSSANIAVGSGATP------LAPPTTDNRASCSAIGDPPTYL 63
EVP+ G + V+WI++SVPS + + GA + P +++ AS S IG+P
Sbjct: 13 EVPVAGGGNVVKWIEISVPSPSVSSSSIGANSSEDNECVQLPLSEDYASSSVIGEPSISF 72
Query: 64 IWRIHKDHSQSLELLEVSASKEFPRFGLRFTFPDALCPFAFICKNENSGSSRFPYLLYVL 123
+WRI+K +LELL++SA FP GLRF F L PFAF+ +E S R Y LY L
Sbjct: 73 VWRINKTSPNALELLQLSAKSGFPITGLRFVFAQTLSPFAFVYADEGGDSGRLVYFLYSL 132
Query: 124 TVSGLAYLLRIRNVSAYASCSIIPVDELFEFDVRGYVSNNXXXXXXXXXXXXXXXXXSDG 183
T SG+ Y+L++ N AY S S+ P+D L DVR Y+ N SDG
Sbjct: 133 TPSGVVYVLKLSNTLAYKSGSVFPLDHLIHLDVRPYL-NESRVTSVAASPGFIFLGRSDG 191
Query: 184 SVCCFQLGVLDPSAPGFLHELRDEAGISRLWGLIS---GGKMVASAQDLVICELHEKKFL 240
V CFQ V + GF ELRD+ G RLWG + G +VA+ QDL I E+H + +L
Sbjct: 192 CVSCFQPIVYFQKSSGFHQELRDDTGFGRLWGFVRLQCRGTVVAAVQDLFISEVHGRNYL 251
Query: 241 FVLHLDGTLRIWDLASHARVFTHNMGVMTMAGANFQRLWVGQSYPELSRIPLAILYGHSP 300
VLH DG LR+WD+ +++RV ++ + G RLW+G++ + IPLA+LY S
Sbjct: 252 CVLHADGALRVWDILTYSRVLCQSIAAKNLEGVMCVRLWLGKADYDSGIIPLAVLYRKSM 311
Query: 301 DENLGMISLHGILYNVGDRIIFSMEPSVQNLSLEEGRCLDVKLMSNKIWILKDDELVSHL 360
++++ +I+++G+ ++ + I S++ +QN+ LEEG DV+ S+KIW LK +EL S++
Sbjct: 312 NDSMDVITVYGLHFSSAEGIALSLDSGLQNIPLEEGELRDVRFTSDKIWTLKANELTSYM 371
Query: 361 LSTDIYEAEAFSLALQEEFVAEQLFQNSEHLVDEILRITHSIFSSSKEDILSFVSSIFLR 420
L EA S LQE++++EQLF +S ++L THS+FSS+K+ I+ F+SSIFLR
Sbjct: 372 LCQKSSTMEAQSYTLQEDYISEQLFLSSRSSSHDLLLTTHSLFSSAKDQIMGFISSIFLR 431
Query: 421 RLLLPGVHLNAALYATLVEYNRHLAESELQTLTADGLKKEILSLIEHEVASE-KVSILHC 479
RLL PG+ N AL TL+++N++ +SE Q+L+ D L EIL L+EHEV +E +S+ H
Sbjct: 432 RLLCPGIFHNVALRLTLLDHNKNWTDSEFQSLSLDELTSEILLLVEHEVTAETSISVFHW 491
Query: 480 WKCFFTRYFHNWCKNNALYGLLFDSSSGAVGLIRKNSVSLFRSLEDIERIVEGSSDEVNE 539
WK F T Y H+WC NN LL S +GL+R NSVSLF LE+ E + GSS E +
Sbjct: 492 WKNFCTSYLHHWCSNNEPRTLLVQSD--VIGLVRNNSVSLFFRLENAEHSLGGSSSEHSN 549
Query: 540 LTGLAXXXXXXXXXXXXXXXXRCVIGFSQQLGKTASSIFYESLLTASVISSEDIVHCIMK 599
LT L RC S+Q G +++YES+ +ISS++IV ++
Sbjct: 550 LTSL-DLGVSHSDHEILAEVLRCTSKISKQWGGAPYAMYYESITGRPIISSDEIVPRLVN 608
Query: 600 ILETGYCIS-GPVLQTSTSGDNIIVLEKELADHKSLRKLSVDMFLSLQGLFRKASEWGKV 658
ILE+GY + G + D EKEL HK+LR S+DM LSL L ++A W KV
Sbjct: 609 ILESGYSTTIGQRTWSDLGADR--AWEKELEAHKNLRTFSIDMLLSLSALCQRAGSWEKV 666
Query: 659 LNVIEGFLKFLVPQKIMHKFDTEXXXXXXXXXXVHTAYQIAKVMFETAWDFLLFLSYLVE 718
++E +L++LVP+K M K D E V Q KVMFE+A+D L +SYL+
Sbjct: 667 FTIMEHYLQYLVPKKSMQKNDGEALSDICSSILVQATSQFVKVMFESAFDIFLLISYLLN 726
Query: 719 ISGQIHLSPDDITKIQLELVPMLQETIFEWLVIIFFAITPATPAVTEDFNSKLSSLQIDN 778
I+GQ+++S DI K++LEL+PM+Q+ + EWL+I+FF TPA EDF+ KLSSLQID+
Sbjct: 727 IAGQVNMSQQDICKLRLELLPMIQDIVSEWLIILFFVTTPAESTSMEDFSLKLSSLQIDS 786
Query: 779 NLGKQLWNEKLGRCDFTLAFMFLLNVKSASVVHSYLWTERFSDMQSYINRMRDFISLIIW 838
++ K+ WN LG+C F+LAF+ L + +S +V Q + +++FIS I +
Sbjct: 787 SIDKRSWNAMLGKCGFSLAFILLFSDRSC-IVDGRFNLRYLPSSQIITSLVQNFISWIRY 845
Query: 839 GQAG-GSSTFLSRSIDLAFILFKHDQYGAAEQLLMMVEGHLLKEKTSHSIQDTDGGWCIR 897
+ G SS+ L RS +L+ L ++ Q A E++L++VE L EKT QDT G WC+
Sbjct: 846 SKTGDDSSSLLRRSTELSLRLIRNGQSDAVERILVVVEASLRGEKTFGCSQDTSGDWCLL 905
Query: 898 HHLLGCCLLAQVQGGLHATKKDKKVSDAIRCFFRFSSGNGASEALQSLSADIGIPYLGFS 957
HL GCCLL QVQ G +++K+ DAIRCFFR SSG G+ +AL SLS + GFS
Sbjct: 906 QHLRGCCLLDQVQRGASGILRERKIIDAIRCFFRASSGEGSWKALHSLSKEA-----GFS 960
Query: 958 GYLCCYVLMILNNRLFQLIINLCGFCTGGYTSIAIWRLQYYQWAMQLFERYNVSEGASQF 1017
++ G TS A W+L YY+WAMQ+FERYN+SEGA QF
Sbjct: 961 PATTGPSIL------------------DGSTSSAAWKLHYYEWAMQIFERYNISEGACQF 1002
Query: 1018 ALAALEQVDEA---LQTQDEKCIGSSVNESVTTIKGRLWANVFIFALDLGRFHDAYCAII 1074
A AALEQVD+A ++ +E ++ T +GRLWANVF F LDL +DAYCAII
Sbjct: 1003 AYAALEQVDDAYNFIEMTEE----FDPTKAATYTRGRLWANVFKFTLDLNLLNDAYCAII 1058
Query: 1075 SNPDEESKYICLRRFIIVLYEQGAIKILCSNKLPLIGLVEKVEQELAWKAERSDISAKPN 1134
SNPDEE K ICLRRFIIVL+E G KIL LP IGL EK+ QEL WKA RSDI KPN
Sbjct: 1059 SNPDEEIKRICLRRFIIVLFECGKTKILSDGHLPFIGLTEKITQELFWKAGRSDIMMKPN 1118
Query: 1135 LYKLLYAFQFHQHNWRRAASYIYLYSARLRTEAALKDNQGSSMILQERLNALSAAVNALH 1194
YKLLYA++ +HNWR AASY+Y +SARLR+E A KD + S++LQERLN LSAA+NAL
Sbjct: 1119 PYKLLYAYEMRRHNWRMAASYMYQFSARLRSEGACKDYKHMSLVLQERLNGLSAAMNALA 1178
Query: 1195 LVHPAYAWIDPLAERSSPLSEHNPTKKAKRTPDEHTDNDAEPQSWQSSIDIEKLEDEYAL 1254
LVHP YAWIDP+ E ++ P KKA+R +E ++ +P+ +S IDIEKL++E+
Sbjct: 1179 LVHPGYAWIDPVPEETT----RYPVKKARRAEEEQLRSNDQPKGEKSCIDIEKLQNEFVF 1234
Query: 1255 TLAEYMLSLVNVKWAFSGKHGALSELADLLVQNNLYDMAFTILLRFFKGSGLKR 1308
T AEYMLSL N W +SG S+L DLLVQ NLYDMAFT++L+F++GS LKR
Sbjct: 1235 TTAEYMLSLKNFGWTYSGLEKPPSDLVDLLVQANLYDMAFTVVLKFWRGSALKR 1288
>AT1G33410.1 | Symbols: SAR1, NUP160, ATNUP160 | SUPPRESSOR OF AUXIN
RESISTANCE1 | chr1:12109769-12118828 REVERSE LENGTH=1504
Length = 1504
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 588/1311 (44%), Positives = 805/1311 (61%), Gaps = 57/1311 (4%)
Query: 11 EVPIIGS-DAVRWIDLSVPSSANIAVGSGATP------LAPPTTDNRASCSAIGDPPTYL 63
EVP+ G + V+WI++SVPS + + GA + P +++ AS S IG+P
Sbjct: 13 EVPVAGGGNVVKWIEISVPSPSVSSSSIGANSSEDNECVQLPLSEDYASSSVIGEPSISF 72
Query: 64 IWRIHKDHSQSLELLEVSASKEFPRFGLRFTFPDALCPFAFICKNENSGSSRFPYLLYVL 123
+WRI+K +LELL++SA FP GLRF F L PFAF+ +E S R Y LY L
Sbjct: 73 VWRINKTSPNALELLQLSAKSGFPITGLRFVFAQTLSPFAFVYADEGGDSGRLVYFLYSL 132
Query: 124 TVSGLAYLLRIRNVSAYASCSIIPVDELFEFDVRGYVSNNXXXXXXXXXXXXXXXXXSDG 183
T SG+ Y+L++ N AY S S+ P+D L DVR Y+ N SDG
Sbjct: 133 TPSGVVYVLKLSNTLAYKSGSVFPLDHLIHLDVRPYL-NESRVTSVAASPGFIFLGRSDG 191
Query: 184 SVCCFQLGVLDPSAPGFLHELRDEAGISRLWGLISGGKMVASAQDLVICELHEKKFLFVL 243
V CFQ V + GF ELRD+ G RL G +VA+ QDL I E+H + +L VL
Sbjct: 192 CVSCFQPIVYFQKSSGFHQELRDDTGFGRL------GTVVAAVQDLFISEVHGRNYLCVL 245
Query: 244 HLDGTLRIWDLASHARVFTHNMGVMTMAGANFQRLWVGQSYPELSRIPLAILYGHSPDEN 303
H DG LR+WD+ +++RV ++ + G RLW+G++ + IPLA+LY S +++
Sbjct: 246 HADGALRVWDILTYSRVLCQSIAAKNLEGVMCVRLWLGKADYDSGIIPLAVLYRKSMNDS 305
Query: 304 LGMISLHGILYNVGDRIIFSMEPSVQNLSLEEGRCLDVKLMSNKIWILKDDELVSHLLST 363
+ +I+++G+ ++ + I S++ +QN+ LEEG DV+ S+KIW LK +EL S++L
Sbjct: 306 MDVITVYGLHFSSAEGIALSLDSGLQNIPLEEGELRDVRFTSDKIWTLKANELTSYMLCQ 365
Query: 364 DIYEAEAFSLALQEEFVAEQLFQNSEHLVDEILRITHSIFSSSKEDILSFVSSIFLRRLL 423
EA S LQE++++EQLF +S ++L THS+FSS+K+ I+ F+SSIFLRRLL
Sbjct: 366 KSSTMEAQSYTLQEDYISEQLFLSSRSSSHDLLLTTHSLFSSAKDQIMGFISSIFLRRLL 425
Query: 424 LPGVHLNAALYATLVEYNRHLAESELQTLTADGLKKEILSLIEHEVASE-KVSILHCWKC 482
PG+ N AL TL+++N++ +SE Q+L+ D L EIL L+EHEV +E +S+ H WK
Sbjct: 426 CPGIFHNVALRLTLLDHNKNWTDSEFQSLSLDELTSEILLLVEHEVTAETSISVFHWWKN 485
Query: 483 FFTRYFHNWCKNNALYGLLFDSSSGAVGLIRKNSVSLFRSLEDIERIVEGSSDEVNELTG 542
F T Y H+WC NN LL S +GL+R NSVSLF LE+ E + GSS E + LT
Sbjct: 486 FCTSYLHHWCSNNEPRTLLVQSD--VIGLVRNNSVSLFFRLENAEHSLGGSSSEHSNLTS 543
Query: 543 LAXXXXXXXXXXXXXXXXRCVIGFSQQLGKTASSIFYESLLTASVISSEDIVHCIMKILE 602
L RC S+Q G +++YES+ +ISS++IV ++ ILE
Sbjct: 544 L-DLGVSHSDHEILAEVLRCTSKISKQWGGAPYAMYYESITGRPIISSDEIVPRLVNILE 602
Query: 603 TGYCIS-GPVLQTSTSGDNIIVLEKELADHKSLRKLSVDMFLSLQGLFRKASEWGKVLNV 661
+GY + G + D EKEL HK+LR S+DM LSL L ++A W KV +
Sbjct: 603 SGYSTTIGQRTWSDLGADR--AWEKELEAHKNLRTFSIDMLLSLSALCQRAGSWEKVFTI 660
Query: 662 IEGFLKFLVPQKIMHKFDTEXXXXXXXXXXVHTAYQIAKVMFETAWDFLLFLSYLVEISG 721
+E +L++LVP+K M K D E V Q KVMFE+A+D L +SYL+ I+G
Sbjct: 661 MEHYLQYLVPKKSMQKNDGEALSDICSSILVQATSQFVKVMFESAFDIFLLISYLLNIAG 720
Query: 722 QIHLSPDDITKIQLELVPMLQETIFEWLVIIFFAITPATPAVTEDFNSKLSSLQIDNNLG 781
Q+++S DI K++LEL+PM+Q+ + EWL+I+FF TPA EDF+ KLSSLQID+++
Sbjct: 721 QVNMSQQDICKLRLELLPMIQDIVSEWLIILFFVTTPAESTSMEDFSLKLSSLQIDSSID 780
Query: 782 KQLWNEKLGRCDFTLAFMFLLNVKSASVVHSYLWTERFSDMQSYINRMRDFISLIIWGQA 841
K+ WN LG+C F+LAF+ L + +S +V Q + +++FIS I + +
Sbjct: 781 KRSWNAMLGKCGFSLAFILLFSDRSC-IVDGRFNLRYLPSSQIITSLVQNFISWIRYSKT 839
Query: 842 G-GSSTFLSRSIDLAFILFKHDQYGAAEQLLMMVEGHLLKEKTSHSIQDTDGGWCIRHHL 900
G SS+ L RS +L+ L ++ Q A E++L++VE L EKT QDT G WC+ HL
Sbjct: 840 GDDSSSLLRRSTELSLRLIRNGQSDAVERILVVVEASLRGEKTFGCSQDTSGDWCLLQHL 899
Query: 901 LGCCLLAQVQGGLHATKKDKKVSDAIRCFFRFSSGNGASEALQSLSADIGIPYLGFSGYL 960
GCCLL QVQ G +++K+ DAIRCFFR SSG G+ +AL SLS + GFS
Sbjct: 900 RGCCLLDQVQRGASGILRERKIIDAIRCFFRASSGEGSWKALHSLSKEA-----GFSPAT 954
Query: 961 CCYVLMILNNRLFQLIINLCGFCTGGYTSIAIWRLQYYQWAMQLFERYNVSEGASQFALA 1020
++ G TS A W+L YY+WAMQ+FERYN+SEGA QFA A
Sbjct: 955 TGPSIL------------------DGSTSSAAWKLHYYEWAMQIFERYNISEGACQFAYA 996
Query: 1021 ALEQVDEA---LQTQDEKCIGSSVNESVTTIKGRLWANVFIFALDLGRFHDAYCAIISNP 1077
ALEQVD+A ++ +E ++ T +GRLWANVF F LDL +DAYCAIISNP
Sbjct: 997 ALEQVDDAYNFIEMTEE----FDPTKAATYTRGRLWANVFKFTLDLNLLNDAYCAIISNP 1052
Query: 1078 DEESKYICLRRFIIVLYEQGAIKILCSNKLPLIGLVEKVEQELAWKAERSDISAKPNLYK 1137
DEE K ICLRRFIIVL+E G KIL LP IGL EK+ QEL WKA RSDI KPN YK
Sbjct: 1053 DEEIKRICLRRFIIVLFECGKTKILSDGHLPFIGLTEKITQELFWKAGRSDIMMKPNPYK 1112
Query: 1138 LLYAFQFHQHNWRRAASYIYLYSARLRTEAALKDNQGSSMILQERLNALSAAVNALHLVH 1197
LLYA++ +HNWR AASY+Y +SARLR+E A KD + S++LQERLN LSAA+NAL LVH
Sbjct: 1113 LLYAYEMRRHNWRMAASYMYQFSARLRSEGACKDYKHMSLVLQERLNGLSAAMNALALVH 1172
Query: 1198 PAYAWIDPLAERSSPLSEHNPTKKAKRTPDEHTDNDAEPQSWQSSIDIEKLEDEYALTLA 1257
P YAWIDP+ E ++ P KKA+R +E ++ +P+ +S IDIEKL++E+ T A
Sbjct: 1173 PGYAWIDPVPEETT----RYPVKKARRAEEEQLRSNDQPKGEKSCIDIEKLQNEFVFTTA 1228
Query: 1258 EYMLSLVNVKWAFSGKHGALSELADLLVQNNLYDMAFTILLRFFKGSGLKR 1308
EYMLSL N W +SG S+L DLLVQ NLYDMAFT++L+F++GS LKR
Sbjct: 1229 EYMLSLKNFGWTYSGLEKPPSDLVDLLVQANLYDMAFTVVLKFWRGSALKR 1279