Miyakogusa Predicted Gene

Lj5g3v0641410.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0641410.1 Non Chatacterized Hit- tr|D8STE6|D8STE6_SELML
Putative uncharacterized protein OS=Selaginella
moelle,36.49,4e-17,5-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT,NULL;
5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT,N,CUFF.53615.1
         (622 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G03420.1 | Symbols:  | 5'-AMP-activated protein kinase-relate...   218   7e-57
AT1G27070.1 | Symbols:  | 5'-AMP-activated protein kinase-relate...    85   2e-16
AT5G39790.1 | Symbols:  | 5'-AMP-activated protein kinase-relate...    80   3e-15

>AT5G03420.1 | Symbols:  | 5'-AMP-activated protein kinase-related |
           chr5:845641-848705 FORWARD LENGTH=598
          Length = 598

 Score =  218 bits (556), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 127/278 (45%), Positives = 162/278 (58%), Gaps = 59/278 (21%)

Query: 386 NSANLSLEERVANFIQNGDLDPVEDHVSGISNGDGSQENKVNIESKP------------- 432
           +S   S+EE+   FIQNG LD V           G+ EN +  ES P             
Sbjct: 336 SSCTSSIEEKTTRFIQNGYLDTV-----------GADENDIPNESCPEESSETTKGGEYI 384

Query: 433 --------VVDMPLDA---------HPPKDNN------------GMPLIGNTEASEVQNQ 463
                   ++  PL+          H  + N+            G+    + E  + +NQ
Sbjct: 385 GDSLGGPRIMSTPLNGSALALKEIIHATEVNSSDRNSDQRDGSVGLDTDPHHETRKRENQ 444

Query: 464 SEINHLKFMLYQKELELSRLKEQIEKEKLALAVLQTKAEAEISKARNLIAEKDADLRVAE 523
            EI+ L+FML QKELELSRLKEQIEKEKL+L+VLQ +AE EI KA+ LI+EK+ +L+ AE
Sbjct: 445 VEIDRLRFMLDQKELELSRLKEQIEKEKLSLSVLQRQAETEIQKAQMLISEKEVELQEAE 504

Query: 524 ESLPGLKEVQIDFCGDADVVEVAGSFNGWSDRIKMDPQPSAGVIDLVGSRKPKIWSTTLW 583
           ESL GL+EV I++CGD + VEV GSFNGW  R+ M+ Q S  +       K K WST LW
Sbjct: 505 ESLSGLQEVVIEYCGDGNAVEVTGSFNGWQHRVGMELQASKSI------GKQKCWSTLLW 558

Query: 584 LYPGVFEIKFVVDGDWRTDPQRESVTRGHICNNILIVD 621
           LYPG +EIKF+VDG W TDPQ++SVTRGHI NNIL VD
Sbjct: 559 LYPGTYEIKFIVDGQWITDPQKDSVTRGHISNNILKVD 596



 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/63 (57%), Positives = 47/63 (74%)

Query: 64  RKSRRLKSDAEICDDIRLFLASVGLPEDHIPSTKELLHHGRNELANIVRRRGHKQIKELL 123
           R  +R+KS+ E+  +I  F+A  GLPE H+PS KEL  HGR +LANIVRRRG+K IKEL+
Sbjct: 54  RVRKRVKSNEELRSEIMQFVALAGLPEGHVPSMKELSAHGRVDLANIVRRRGYKFIKELV 113

Query: 124 TSS 126
            +S
Sbjct: 114 ANS 116


>AT1G27070.1 | Symbols:  | 5'-AMP-activated protein kinase-related |
           chr1:9396945-9399225 REVERSE LENGTH=532
          Length = 532

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 12/145 (8%)

Query: 476 KELELSRLKEQIEKEKLALAVLQTKAEAEISKARNLIAEKDADLRVAEESLPGLKEVQID 535
           KE E+   + ++   +  LAVL+ K    I  A+ ++ EK   +  A  +L  L+   I 
Sbjct: 399 KENEIIHAQNKLRSTRAKLAVLEGKMAMAIIDAQRIVREKQRRIDHASRALRLLRTASIV 458

Query: 536 FCGDADVVEVAGSFNGWSDRIKMDPQPSAGVIDLVGSRKPKIWSTTLWLYPGVFEIKFVV 595
           +   A  V + GSF+GWS + KM    +             ++S +L LYPG +EIKF+V
Sbjct: 459 WPNSASEVLLTGSFDGWSTQRKMKKAENG------------VFSLSLKLYPGKYEIKFIV 506

Query: 596 DGDWRTDPQRESVTRGHICNNILIV 620
           DG W+ DP R  VT G   NN+LI+
Sbjct: 507 DGQWKVDPLRPIVTSGGYENNLLII 531


>AT5G39790.1 | Symbols:  | 5'-AMP-activated protein kinase-related |
           chr5:15932884-15935121 REVERSE LENGTH=273
          Length = 273

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 116/225 (51%), Gaps = 35/225 (15%)

Query: 418 GDGSQENKVNIESKPVVDMPLDAHPPKDNNGMPLIGNTEASE-VQNQSEINHLKFMLYQK 476
           G G++E+ +   S+ ++D  L + P   +    L+ +TE S+ V+  SE N     L ++
Sbjct: 63  GVGTEESSL---SEDLLDESL-SRPLTSDELKSLLIDTERSKLVKKLSEANQQNRFLKRQ 118

Query: 477 ELELSRLKEQIEKEKLALAVLQTKAEAEISK---------------ARNLIAEKDADLRV 521
           E E++ +K ++   +L +  L   AE EI+                  +L++  DA  + 
Sbjct: 119 EHEITNIKTELALMELEVQALVKLAE-EIANLGIPQGSRKISGKYIQSHLLSRLDAVQKK 177

Query: 522 AEESLPGL-----KEVQIDFCGDADVVEVAGSFNGWSDRIKMDPQPSAGVIDLVGSRKPK 576
            +E + G+     KEV + + G A+ V+V GSF+GWS R  + P+ SA            
Sbjct: 178 MKEQIKGVEAAQSKEVHVFWIGMAESVQVMGSFDGWSQREDLSPEYSALFTKF------- 230

Query: 577 IWSTTLWLYPGVFEIKFVVDGDWRTDPQRESVTRGHICNNILIVD 621
             STTL+L PG +E+KF+VDG+W+  P+  +   G + NN+L+V+
Sbjct: 231 --STTLFLRPGRYEMKFLVDGEWQISPEFPTSGEGLMENNVLVVE 273