Miyakogusa Predicted Gene

Lj5g3v0630280.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0630280.2 Non Chatacterized Hit- tr|J3LIJ8|J3LIJ8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB02G4,54.22,3e-19,seg,NULL,CUFF.53613.2
         (83 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G03460.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    86   4e-18

>AT5G03460.1 | Symbols:  | unknown protein; FUNCTIONS IN:
          molecular_function unknown; INVOLVED IN:
          biological_process unknown; LOCATED IN: endomembrane
          system; EXPRESSED IN: 24 plant structures; EXPRESSED
          DURING: 15 growth stages; Has 30201 Blast hits to 17322
          proteins in 780 species: Archae - 12; Bacteria - 1396;
          Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
          0; Other Eukaryotes - 2996 (source: NCBI BLink). |
          chr5:864391-865509 FORWARD LENGTH=89
          Length = 89

 Score = 86.3 bits (212), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 6/89 (6%)

Query: 1  MVCVACLLPLFLVPIINLLPLLFDFLMAKIYRVFGWEYRKPERAPPACPYKPSA--NGVS 58
          MVCV CL+PLFLVP+INL+P + D+ MAK+Y   GWEYRKP R PPACP+KP A  +  +
Sbjct: 1  MVCVMCLVPLFLVPLINLMPRIIDYFMAKLYAWLGWEYRKPARVPPACPFKPVAKNDNAT 60

Query: 59 KQXXXXXXXXXXXXVKP----ESVNVKED 83
          K              KP    E+  +K+D
Sbjct: 61 KVGAETGTEGTETIAKPGVVEETGGIKQD 89