Miyakogusa Predicted Gene
- Lj5g3v0628100.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0628100.1 Non Chatacterized Hit- tr|A5C1G7|A5C1G7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,59.49,6e-19,seg,NULL; VACUOLAR ATP SYNTHASE SUBUNIT G PLANT,NULL;
VACUOLAR ATP SYNTHASE SUBUNIT G,Vacuolar (H+)-,CUFF.53599.1
(110 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G01390.2 | Symbols: VMA10, AVMA10 | vacuolar membrane ATPase ... 117 1e-27
AT3G01390.1 | Symbols: VMA10, AVMA10 | vacuolar membrane ATPase ... 117 1e-27
AT4G23710.1 | Symbols: VHA-G2, VAG2, VATG2 | vacuolar ATP syntha... 113 3e-26
AT4G25950.1 | Symbols: VATG3 | vacuolar ATP synthase G3 | chr4:1... 100 2e-22
>AT3G01390.2 | Symbols: VMA10, AVMA10 | vacuolar membrane ATPase 10
| chr3:150265-150922 REVERSE LENGTH=110
Length = 110
Score = 117 bits (294), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/110 (64%), Positives = 85/110 (77%)
Query: 1 MASNRGQGGIXXXXXXXXXXXRIVNAAKNEKLARLKQAKEEADKEIAEYRAKLELEFQKK 60
M SNRGQG I IVNAA+ K+ARLKQAKEEA+KEIAEY+A+ E +FQ+K
Sbjct: 1 MESNRGQGSIQQLLAAEVEAQHIVNAARTAKMARLKQAKEEAEKEIAEYKAQTEQDFQRK 60
Query: 61 VSDSSGDSGANVKRLEQETQAKIQHLQTEAARISDDVVAMLLKYVTTVKN 110
+ ++SGDSGANVKRLEQET KI+ L+ EA+RIS DVV MLLK+VTTVKN
Sbjct: 61 LEETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110
>AT3G01390.1 | Symbols: VMA10, AVMA10 | vacuolar membrane ATPase 10
| chr3:150265-150922 REVERSE LENGTH=110
Length = 110
Score = 117 bits (294), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/110 (64%), Positives = 85/110 (77%)
Query: 1 MASNRGQGGIXXXXXXXXXXXRIVNAAKNEKLARLKQAKEEADKEIAEYRAKLELEFQKK 60
M SNRGQG I IVNAA+ K+ARLKQAKEEA+KEIAEY+A+ E +FQ+K
Sbjct: 1 MESNRGQGSIQQLLAAEVEAQHIVNAARTAKMARLKQAKEEAEKEIAEYKAQTEQDFQRK 60
Query: 61 VSDSSGDSGANVKRLEQETQAKIQHLQTEAARISDDVVAMLLKYVTTVKN 110
+ ++SGDSGANVKRLEQET KI+ L+ EA+RIS DVV MLLK+VTTVKN
Sbjct: 61 LEETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110
>AT4G23710.1 | Symbols: VHA-G2, VAG2, VATG2 | vacuolar ATP synthase
subunit G2 | chr4:12350577-12351354 FORWARD LENGTH=106
Length = 106
Score = 113 bits (283), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/103 (58%), Positives = 72/103 (69%)
Query: 8 GGIXXXXXXXXXXXRIVNAAKNEKLARLKQAKEEADKEIAEYRAKLELEFQKKVSDSSGD 67
GI +IVNAA+ K+ RLKQAKEEA+ E+AE++ E FQ+K+ +SGD
Sbjct: 4 AGIQQLLAAEREAQQIVNAARTAKMTRLKQAKEEAETEVAEHKTSTEQGFQRKLEATSGD 63
Query: 68 SGANVKRLEQETQAKIQHLQTEAARISDDVVAMLLKYVTTVKN 110
SGANVKRLEQET AKI+ L+ EA RIS DVV MLLK VTTV N
Sbjct: 64 SGANVKRLEQETDAKIEQLKNEATRISKDVVDMLLKNVTTVNN 106
>AT4G25950.1 | Symbols: VATG3 | vacuolar ATP synthase G3 |
chr4:13173815-13174324 REVERSE LENGTH=108
Length = 108
Score = 100 bits (249), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 75/108 (69%), Gaps = 2/108 (1%)
Query: 1 MASNRGQGGIXXXXXXXXXXXRIVNAAKNEKLARLKQAKEEADKEIAEYRAKLELEFQKK 60
M S RGQGGI RIV+AA+ KLAR+KQAK+EA+KE+ EYR++LE E+Q +
Sbjct: 1 MDSLRGQGGIQMLLTAEQEAGRIVSAARTAKLARMKQAKDEAEKEMEEYRSRLEEEYQTQ 60
Query: 61 VSDSSGDSGANVKRLEQETQAKIQHLQTEAARISDDVVAMLLKYVTTV 108
VS + D A+ KRL+ ET +I +L+ ++++S D+V ML+KYVTT
Sbjct: 61 VSGT--DQEADAKRLDDETDVRITNLKESSSKVSKDIVKMLIKYVTTT 106