Miyakogusa Predicted Gene

Lj5g3v0626910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0626910.1 Non Chatacterized Hit- tr|I1L8V1|I1L8V1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82,0,ZF_RING_2,Zinc
finger, RING-type; RING/U-box,NULL; Ring finger,Zinc finger,
RING-type; no descriptio,CUFF.53569.1
         (349 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G09770.1 | Symbols:  | RING/U-box superfamily protein | chr3:...   358   3e-99
AT3G53410.1 | Symbols:  | RING/U-box superfamily protein | chr3:...   327   6e-90
AT5G03200.1 | Symbols:  | RING/U-box superfamily protein | chr5:...   313   1e-85
AT3G09770.2 | Symbols:  | RING/U-box superfamily protein | chr3:...   289   2e-78
AT5G19080.1 | Symbols:  | RING/U-box superfamily protein | chr5:...   263   9e-71
AT3G06140.1 | Symbols:  | RING/U-box superfamily protein | chr3:...   248   4e-66
AT4G39050.1 | Symbols:  | Kinesin motor family protein | chr4:18...    50   2e-06
AT1G59560.1 | Symbols: ZCF61, DAL2 | E3 Ubiquitin ligase family ...    50   3e-06
AT1G30860.1 | Symbols:  | RING/U-box superfamily protein | chr1:...    48   9e-06

>AT3G09770.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:2996402-2997835 REVERSE LENGTH=388
          Length = 388

 Score =  358 bits (919), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 175/252 (69%), Positives = 213/252 (84%), Gaps = 8/252 (3%)

Query: 95  PAPYVEQREAVTIKNDVNVKKETLKIVPDEENPGHFLVSFTFDATVSGSVTVLFFAKEGE 154
           P PYVE ++AVTI+NDVN+KKE+L++ PD +NPG FLVSFTFDATVSG ++V+FFAKE E
Sbjct: 120 PTPYVEHQKAVTIRNDVNLKKESLRLEPDPDNPGRFLVSFTFDATVSGRISVIFFAKESE 179

Query: 155 GCILTPMKENVLPPVTVNFQQGLGQKFRQPAGTGIKFSEFDEAELLK-VGDMDVYPVAVK 213
            C LT  KE++LPP+T++F++GLGQKF+Q +G+GI FS F++ EL K   D ++YP+AVK
Sbjct: 180 DCKLTATKEDILPPITLDFEKGLGQKFKQSSGSGIDFSVFEDVELFKAAADTEIYPLAVK 239

Query: 214 ADAS-SGDHDGSEETPASGNTNSQITQAVFEKEKGEFRVKVVKQILWVNGMRYELQEIYG 272
           A+A+ SG  +  EE   SG+ N+QITQAV+EK+KGE +++VVKQILWVNG RYELQEIYG
Sbjct: 240 AEAAPSGGENEEEER--SGSKNAQITQAVYEKDKGEIKIRVVKQILWVNGTRYELQEIYG 297

Query: 273 IGNSMES----DLDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPIC 328
           IGN++E       D NDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPIC
Sbjct: 298 IGNTVEGDDDSADDANDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPIC 357

Query: 329 RQPVERLLEIKV 340
           RQPVERLLEIKV
Sbjct: 358 RQPVERLLEIKV 369


>AT3G53410.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:19801175-19802274 REVERSE LENGTH=299
          Length = 299

 Score =  327 bits (839), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 162/263 (61%), Positives = 199/263 (75%), Gaps = 11/263 (4%)

Query: 84  PMWGCYQAPL----PPAPYVEQREAVTIKNDVNVKKETLKIVPDEENPGHFLVSFTFDAT 139
           P   C + P      P  YVE +EAVTI+ND+N+KKETL++ PDE+NPG FL+SFTFDA+
Sbjct: 36  PYQDCARYPYGEMASPVQYVEHQEAVTIRNDINLKKETLRLEPDEQNPGKFLLSFTFDAS 95

Query: 140 VSGSVTVLFFAKEGEGCILTPMKENVLPPVTVNFQQGLGQKFRQPAGTGIKFSEFDEAEL 199
           V GS+TV+FFAKEG+ C L   KE++ P   V+F +GL Q+F+Q  GTGI FS+  EA+L
Sbjct: 96  VPGSITVMFFAKEGKDCNLIATKEDLFPSTQVSFAKGLEQRFKQACGTGIDFSDMSEADL 155

Query: 200 LKVGDMDVYPVAVKADASSGDHDGSEETPASGNTNSQITQAVFEKE-KGEFRVKVVKQIL 258
           ++  + DVY VAVKA+  S D     + P SG  N QIT  V EK+ KGE++ +VVKQIL
Sbjct: 156 VEANETDVYHVAVKAEVVSED-----DHPESGTPNRQITHVVLEKDHKGEYKARVVKQIL 210

Query: 259 WVNGMRYELQEIYGIGNSMESD-LDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKV 317
           WVNG RY LQEIYGIGN+++ +  D N+ GKECVICLSEPRDTTVLPCRHMCMCSGCAK+
Sbjct: 211 WVNGNRYVLQEIYGIGNTVDDNGEDANERGKECVICLSEPRDTTVLPCRHMCMCSGCAKL 270

Query: 318 LRFQTNRCPICRQPVERLLEIKV 340
           LRFQTN CPICRQPV+RLLEI V
Sbjct: 271 LRFQTNLCPICRQPVDRLLEITV 293


>AT5G03200.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:760450-761667 REVERSE LENGTH=337
          Length = 337

 Score =  313 bits (802), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 160/268 (59%), Positives = 196/268 (73%), Gaps = 17/268 (6%)

Query: 77  HHRPPMD-----PMWGCYQAP-LPPAPYVEQREAVTIKNDVNVKKETLKIVPDEENPGHF 130
           HH PP       P++   + P LPP  YV Q+ AVTI+NDVN+KK+TL ++PD ENP   
Sbjct: 77  HHYPPNSYQLPHPLFHGGRYPILPPPTYVHQK-AVTIRNDVNLKKKTLTLIPDPENPNRL 135

Query: 131 LVSFTFDATVSGSVTVLFFAKEGEGCILTPMKENVLPPVTVNFQQGLGQKFRQPAGTGIK 190
           LVSFTFDA++ G +TV+FFA E   C L   KE+ LPP+T +F +GLGQKF Q +GTGI 
Sbjct: 136 LVSFTFDASMPGRITVVFFATEDAECNLRATKEDTLPPITFDFGEGLGQKFIQSSGTGID 195

Query: 191 FSEFDEAELLKVGDMDVYPVAVKADASSGDHDGSEETPASGNTNSQITQAVFEKEKGEFR 250
            + F ++EL K  D DV+P+AVKA+A+  +         SG+TN QITQ V+ KEKGE +
Sbjct: 196 LTAFKDSELFKEVDTDVFPLAVKAEATPAEEG------KSGSTNVQITQVVYTKEKGEIK 249

Query: 251 VKVVKQILWVNGMRYELQEIYGIGNSMESDLDGNDPGKECVICLSEPRDTTVLPCRHMCM 310
           ++VVKQILWVN  RYEL EIYGI N+    +DG+D GKECV+CLSEPRDTTVLPCRHMCM
Sbjct: 250 IEVVKQILWVNKRRYELLEIYGIENT----VDGSDEGKECVVCLSEPRDTTVLPCRHMCM 305

Query: 311 CSGCAKVLRFQTNRCPICRQPVERLLEI 338
           CSGCAK LRFQTN CP+CRQPVE LLEI
Sbjct: 306 CSGCAKALRFQTNLCPVCRQPVEMLLEI 333


>AT3G09770.2 | Symbols:  | RING/U-box superfamily protein |
           chr3:2996629-2997835 REVERSE LENGTH=341
          Length = 341

 Score =  289 bits (740), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 143/221 (64%), Positives = 181/221 (81%), Gaps = 8/221 (3%)

Query: 95  PAPYVEQREAVTIKNDVNVKKETLKIVPDEENPGHFLVSFTFDATVSGSVTVLFFAKEGE 154
           P PYVE ++AVTI+NDVN+KKE+L++ PD +NPG FLVSFTFDATVSG ++V+FFAKE E
Sbjct: 120 PTPYVEHQKAVTIRNDVNLKKESLRLEPDPDNPGRFLVSFTFDATVSGRISVIFFAKESE 179

Query: 155 GCILTPMKENVLPPVTVNFQQGLGQKFRQPAGTGIKFSEFDEAELLK-VGDMDVYPVAVK 213
            C LT  KE++LPP+T++F++GLGQKF+Q +G+GI FS F++ EL K   D ++YP+AVK
Sbjct: 180 DCKLTATKEDILPPITLDFEKGLGQKFKQSSGSGIDFSVFEDVELFKAAADTEIYPLAVK 239

Query: 214 ADAS-SGDHDGSEETPASGNTNSQITQAVFEKEKGEFRVKVVKQILWVNGMRYELQEIYG 272
           A+A+ SG  +  EE   SG+ N+QITQAV+EK+KGE +++VVKQILWVNG RYELQEIYG
Sbjct: 240 AEAAPSGGENEEEER--SGSKNAQITQAVYEKDKGEIKIRVVKQILWVNGTRYELQEIYG 297

Query: 273 IGNSMES----DLDGNDPGKECVICLSEPRDTTVLPCRHMC 309
           IGN++E       D NDPGKECVICLSEPRDTTVLPCRHM 
Sbjct: 298 IGNTVEGDDDSADDANDPGKECVICLSEPRDTTVLPCRHMV 338


>AT5G19080.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:6378400-6380287 FORWARD LENGTH=378
          Length = 378

 Score =  263 bits (673), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 131/252 (51%), Positives = 166/252 (65%), Gaps = 9/252 (3%)

Query: 94  PPAPYVEQREAVTIKNDVNVKKETLKIVPDEENPGHFLVSFTFDATVSGSVTVLFFAKEG 153
           PPAPYVE + A  +KNDVNV K T+++V D+ NPGH+LVSF FDA   GS T++FF +E 
Sbjct: 124 PPAPYVEHQTAKKVKNDVNVNKATVRLVADDLNPGHYLVSFVFDALFDGSFTIIFFGEEE 183

Query: 154 EGCILTPMKENVLPPVTVNFQQGLGQKFRQPAGTGIKFSEFDEAELLKVGDMDVYPVAVK 213
             C + P      PP+ V FQ+G GQKF Q  GTGI    F   +L K    +VYP+ + 
Sbjct: 184 SKCTIVPHLPEAFPPIKVPFQKGAGQKFLQAPGTGIDLGFFSLDDLSKPSPEEVYPLVIS 243

Query: 214 ADASSGDHDGSEETPASGNTNSQITQAVFEKEK-GEFRVKVVKQILWVNGMRYELQEIYG 272
           A+        SEE       + QITQAV EK   G F+VKV+KQILW+ G RYELQE+YG
Sbjct: 244 AETVISPSSVSEEP----LVHKQITQAVLEKTNDGSFKVKVMKQILWIEGERYELQELYG 299

Query: 273 IGNSMESDLDG----NDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPIC 328
           I NS+          +  GKECVICL+EP+DT V+PCRH+C+CS CA+ LRFQTN+CPIC
Sbjct: 300 IDNSITQGTAASGLEDTGGKECVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNKCPIC 359

Query: 329 RQPVERLLEIKV 340
           RQP+  L++IKV
Sbjct: 360 RQPIHELVKIKV 371


>AT3G06140.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:1856993-1858777 REVERSE LENGTH=359
          Length = 359

 Score =  248 bits (633), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 124/245 (50%), Positives = 165/245 (67%), Gaps = 6/245 (2%)

Query: 98  YVEQREAVTIKNDVNVKKETLKIVPDEENPGHFLVSFTFDATVSGSVTVLFFAKEGEGCI 157
           Y+EQ+ A  ++NDVNV ++T+++  D+  PGH LVSF FDA   GS T+ FFAKE   C 
Sbjct: 112 YLEQQNAKKVRNDVNVHRDTVRLEVDDLVPGHHLVSFVFDALFDGSFTITFFAKEEPNCT 171

Query: 158 LTPMKENVLPPVTVNFQQGLGQKFRQPAGTGIKFSEFDEAELLKVGDMDVYPVAVKADAS 217
           + P    V  P   +FQ+G GQKF QP+GTG   S F   +L K  + DVYP+ + A+  
Sbjct: 172 IIPQFPEVYSPTRFHFQKGPGQKFLQPSGTGTDLSFFVLDDLSKPLEEDVYPLVISAETI 231

Query: 218 SGDHDGSEETPASGNTNSQITQAVFEKEK-GEFRVKVVKQILWVNGMRYELQEIYG-IGN 275
              +  SE++    + + Q+TQAV EK+  G F+VKVVKQILW+ G+RYEL+E+YG    
Sbjct: 232 ISPNSISEQS----SVHKQVTQAVLEKDNDGSFKVKVVKQILWIEGVRYELRELYGSTTQ 287

Query: 276 SMESDLDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERL 335
              S LD +  G ECVIC++E +DT VLPCRH+CMCS CAK LR Q+N+CPICRQP+E L
Sbjct: 288 GAASGLDESGSGTECVICMTEAKDTAVLPCRHLCMCSDCAKELRLQSNKCPICRQPIEEL 347

Query: 336 LEIKV 340
           LEIK+
Sbjct: 348 LEIKM 352


>AT4G39050.1 | Symbols:  | Kinesin motor family protein |
            chr4:18193462-18200148 FORWARD LENGTH=1055
          Length = 1055

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 277  MESDLDGNDPGKECVICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPV 332
            M+S  +G+     C +C   P    +LPCRH C+C  C+       + CPICR  +
Sbjct: 995  MKSQANGDANSHICKVCFESPTAAILLPCRHFCLCKSCS----LACSECPICRTKI 1046


>AT1G59560.1 | Symbols: ZCF61, DAL2 | E3 Ubiquitin ligase family
           protein | chr1:21881741-21883632 FORWARD LENGTH=338
          Length = 338

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 14/97 (14%)

Query: 242 FEKEKGEFRVKVVKQILWVNGMRYELQEIYGIGNSMESDLDGNDPGKECVICLSEPRDTT 301
            E+ + +F +K V     V+      + + G G S     DG+ P   CV+CL +  +T 
Sbjct: 253 LERRRRQFALKRV-----VDAAARRAKPVTGGGTSR----DGDTP-DLCVVCLDQKYNTA 302

Query: 302 VLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEI 338
            + C HMC C+ C+     Q   CP+CR+ ++++L+I
Sbjct: 303 FVECGHMCCCTPCS----LQLRTCPLCRERIQQVLKI 335


>AT1G30860.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:10986696-10989246 REVERSE LENGTH=730
          Length = 730

 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 15/88 (17%)

Query: 260 VNGMRYELQ----EIYGIGNSMESDLDGN----------DPGK-ECVICLSEPRDTTVLP 304
           ++GMR ++Q    E+  + +S+++ LD N          +P K +C +C     +  +  
Sbjct: 631 ISGMRSQIQQLQQEMSVLRDSVKTCLDANASLQHKAHQENPMKRKCCVCDETQVEAVLYR 690

Query: 305 CRHMCMCSGCAKVLRFQTNRCPICRQPV 332
           C HMCMC  CA  L +   +CPICR  +
Sbjct: 691 CGHMCMCLKCANELHWSGGKCPICRAQI 718