Miyakogusa Predicted Gene

Lj5g3v0626690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0626690.1 tr|D8TW33|D8TW33_VOLCA Qc-SNARE, SYP7-family
OS=Volvox carteri GN=syp71 PE=4
SV=1,46.88,0.000000000003,T_SNARE,Target SNARE coiled-coil domain;
seg,NULL; SYNTAXIN,Syntaxin/epimorphin, conserved site; no
,CUFF.53563.1
         (265 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G09740.1 | Symbols: SYP71, ATSYP71 | syntaxin of plants 71 | ...   397   e-111
AT3G61450.2 | Symbols: SYP73 | syntaxin of plants 73 | chr3:2273...   329   1e-90
AT3G45280.1 | Symbols: SYP72, ATSYP72 | syntaxin of plants 72 | ...   323   1e-88
AT3G61450.1 | Symbols: SYP73, ATSYP73 | syntaxin of plants 73 | ...   317   4e-87

>AT3G09740.1 | Symbols: SYP71, ATSYP71 | syntaxin of plants 71 |
           chr3:2989615-2991354 FORWARD LENGTH=266
          Length = 266

 Score =  397 bits (1019), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/266 (72%), Positives = 223/266 (83%), Gaps = 2/266 (0%)

Query: 1   MSVIDLLTRVDTICNKYDKYDVERHRESNLSGDDAFARLYATVDADIEALNQKAETASKE 60
           M+VID+LTRVD+IC KYDKYDV++ RE+N+SGDDAFARLY   +  IE   +KAE  +KE
Sbjct: 1   MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAELVTKE 60

Query: 61  KGKASAVAINAEIRRTKARLLEEVPKLQKLAVKKVKGLSSQEFAARNDLVLALPERIQAI 120
           K +A+AVA+NAEIRRTKARL EEVPKLQ+LAVK+VKGL+++E AARNDLVLALP RI+AI
Sbjct: 61  KNRAAAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAARNDLVLALPARIEAI 120

Query: 121 PDGTPAAPKQTGGW--ASSGSRPDIKFDSDGRFDDEYFQQTEESSRFRNEYEMRRIKQDQ 178
           PDGT   PK T  W  +S+ SRPDIKFDSDGRFDD+YFQ++ ESS+FR EYEMR+IKQ+Q
Sbjct: 121 PDGTAGGPKSTSAWTPSSTTSRPDIKFDSDGRFDDDYFQESNESSQFRQEYEMRKIKQEQ 180

Query: 179 GLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDTKVDQAASDLKNTNVRLKDTVIQLRS 238
           GLD+I+EGLD LK+MA DMNEELDRQVPLMDEIDTKVD+A SDLKNTNVRLKDTV QLRS
Sbjct: 181 GLDMISEGLDALKNMASDMNEELDRQVPLMDEIDTKVDRATSDLKNTNVRLKDTVNQLRS 240

Query: 239 SRNFCXXXXXXXXXXXXAAYLYNVLK 264
           SRNFC            AAYLYNVLK
Sbjct: 241 SRNFCIDIVLLCIVLGIAAYLYNVLK 266


>AT3G61450.2 | Symbols: SYP73 | syntaxin of plants 73 |
           chr3:22738455-22739953 FORWARD LENGTH=264
          Length = 264

 Score =  329 bits (844), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 168/267 (62%), Positives = 208/267 (77%), Gaps = 6/267 (2%)

Query: 1   MSVIDLLTRVDTICNKYDKYDVERHRESNLSGDDAFARLYATVDADIEALNQKAETASKE 60
           M VIDL+TRVD+IC KY+KYD+ R R++N+SGDDAF+RLY+ V+  +E + QK E  S E
Sbjct: 1   MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSE 60

Query: 61  KGKASAVAINAEIRRTKARLLEEVPKLQKLAVKKVKGLSSQEFAARNDLVLALPERIQAI 120
             KA AVA+NAEIRRTKARLLE +PKLQ+L++KKVKGLS +E  ARNDLVL+L ++I+AI
Sbjct: 61  TNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAI 120

Query: 121 PDGTPAAPKQTGGWASSGSRPDIKFD---SDGRFDDEYFQQTEESSRFRNEYEMRRIKQD 177
           P+ +  AP   GGW +S S  +I+FD   SD R   EYFQ T ES +F+ EYEM+RIKQD
Sbjct: 121 PESS--AP-VVGGWEASTSYSNIRFDTNVSDDRIGSEYFQPTGESDQFKQEYEMKRIKQD 177

Query: 178 QGLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDTKVDQAASDLKNTNVRLKDTVIQLR 237
           QGLD IAEGLDTLK+MA D+NEELDRQ PLMDEIDTK+D+AA+DLK+TNVRLKDTV +LR
Sbjct: 178 QGLDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDTKIDKAATDLKSTNVRLKDTVTKLR 237

Query: 238 SSRNFCXXXXXXXXXXXXAAYLYNVLK 264
           SSRNFC            AA++YN +K
Sbjct: 238 SSRNFCIDIILLCILLGIAAFIYNSVK 264


>AT3G45280.1 | Symbols: SYP72, ATSYP72 | syntaxin of plants 72 |
           chr3:16611445-16613304 REVERSE LENGTH=267
          Length = 267

 Score =  323 bits (827), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 161/266 (60%), Positives = 205/266 (77%), Gaps = 3/266 (1%)

Query: 1   MSVIDLLTRVDTICNKYDKYDVERHRESNLSGDDAFARLYATVDADIEALNQKAETASKE 60
           M VID++ RVD IC KYDKYD+++HRE   SGDDAF+RL+ ++D+DIEA+ +KAE AS E
Sbjct: 1   MPVIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTE 60

Query: 61  KGKASAVAINAEIRRTKARLLEEVPKLQKLAVKKVKGLSSQEFAARNDLVLALPERIQAI 120
           K +A+AVA+NAE+RRTKARL E+V KLQKLAVKK+KGL+ +E  +R DLV+AL +R+QAI
Sbjct: 61  KNRAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESRCDLVIALADRLQAI 120

Query: 121 PDGTPAAPKQTGG-W-ASSGSRPDIKFD-SDGRFDDEYFQQTEESSRFRNEYEMRRIKQD 177
           PDG     KQ    W  +S    +IKFD S+   DD +FQQ+EESS+FR EYEMRR KQD
Sbjct: 121 PDGNEHGAKQANSDWGGASAPNKNIKFDMSEEDMDDGFFQQSEESSQFRQEYEMRRKKQD 180

Query: 178 QGLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDTKVDQAASDLKNTNVRLKDTVIQLR 237
           +GLD+I+EGLD LK++A DMNEELD+QVPLM+E++TKVD A SDLKNTNVRLK  ++Q+R
Sbjct: 181 EGLDIISEGLDALKNLARDMNEELDKQVPLMEEMETKVDGATSDLKNTNVRLKKQLVQMR 240

Query: 238 SSRNFCXXXXXXXXXXXXAAYLYNVL 263
           SSRNFC             +Y+YN L
Sbjct: 241 SSRNFCIDIILLCVILGIVSYIYNAL 266


>AT3G61450.1 | Symbols: SYP73, ATSYP73 | syntaxin of plants 73 |
           chr3:22738455-22739953 FORWARD LENGTH=263
          Length = 263

 Score =  317 bits (813), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 165/267 (61%), Positives = 206/267 (77%), Gaps = 7/267 (2%)

Query: 1   MSVIDLLTRVDTICNKYDKYDVERHRESNLSGDDAFARLYATVDADIEALNQKAETASKE 60
           M VIDL+TRVD+IC KY+KYD+ R R++N+SGDDAF+RLY+ V+  +E + QK E  S E
Sbjct: 1   MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSE 60

Query: 61  KGKASAVAINAEIRRTKARLLEEVPKLQKLAVKKVKGLSSQEFAARNDLVLALPERIQAI 120
             KA AVA+NAEIRRTKARLLE +PKLQ+L++KKVKGLS +E  ARNDLVL+L ++I+AI
Sbjct: 61  TNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAI 120

Query: 121 PDGTPAAPKQTGGWASSGSRPDIKFD---SDGRFDDEYFQQTEESSRFRNEYEMRRIKQD 177
           P+ +  AP   GGW +S S  +I+FD   SD R   EYFQ T ES +F+ EYEM+RIKQ 
Sbjct: 121 PESS--AP-VVGGWEASTSYSNIRFDTNVSDDRIGSEYFQPTGESDQFKQEYEMKRIKQA 177

Query: 178 QGLDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDTKVDQAASDLKNTNVRLKDTVIQLR 237
           + LD IAEGLDTLK+MA D+NEELDRQ PLMDEIDTK+D+AA+DLK+TNVRLKDTV +LR
Sbjct: 178 R-LDYIAEGLDTLKNMAQDINEELDRQEPLMDEIDTKIDKAATDLKSTNVRLKDTVTKLR 236

Query: 238 SSRNFCXXXXXXXXXXXXAAYLYNVLK 264
           SSRNFC            AA++YN +K
Sbjct: 237 SSRNFCIDIILLCILLGIAAFIYNSVK 263